View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4975-Insertion-3 (Length: 428)
Name: NF4975-Insertion-3
Description: NF4975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4975-Insertion-3 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 14 - 428
Target Start/End: Original strand, 24799257 - 24799654
Alignment:
| Q |
14 |
aagcattgaaaatttcaaataaaattctaagaacagtattgaaggctaaagaagattgaa-tcccatcatnnnnnnnttacagacaacattaagtatcaa |
112 |
Q |
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| T |
24799257 |
aagcattgaaaatttcaaataaaattctaaaaacagtattgaaggctaaagaagatttaaattccatcataaaaaaattacagacaatattttgtatcaa |
24799356 |
T |
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| Q |
113 |
aatatctagctacttgaatatttgattcatgtacatggataaaagaaaaaagacttcataaatgttatctcaacaaaaaatagaaattagttgagcattc |
212 |
Q |
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| T |
24799357 |
aatatatagctacttgaatatt-gattcatgtacatggatgaaagaaaaaagacttcataaatgttatctcaacaaaaaatagaaataagttgagcattc |
24799455 |
T |
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| Q |
213 |
atatataaaaatgcaatgaaatttctatcaaatgctacatgttgttcccccaaacacttcatagagaggatagtttcaatacgttagctatatgtcttct |
312 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
24799456 |
atatatacaaatgcaatgaaatttctatcaaatgctacatgttgttcccccaaacacttcatagagaggatagtttcaatatattagctatatgtcttct |
24799555 |
T |
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| Q |
313 |
ctcctcgttgaagtgttcgagggaacactaggtaacaaatgatgatatatgtgacttattatttcatagtgatttaatttgtatgactaatgctcaacta |
412 |
Q |
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| T |
24799556 |
ctcctcattgaagtgttcgagggaacactaggtaacaaatgatgatat-----------------atagtgatttaatttgtatgactaatgctcaacta |
24799638 |
T |
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