View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4976-Insertion-11 (Length: 264)
Name: NF4976-Insertion-11
Description: NF4976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4976-Insertion-11 |
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Alignment Details
Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 47706895 - 47706977
Alignment:
| Q |
79 |
cctgcaagttcttgcttcttcaacaaaaagagaaaacctctctttccattttttaaacttttattaacagctatacatgatac |
161 |
Q |
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| T |
47706895 |
cctgcaagttcttgcttcttcaacaaaaagagaaaacctctctttccatttttgaaagttttattaacagctatacatgatac |
47706977 |
T |
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Target: chr3; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 47706994 - 47707059
Alignment:
| Q |
199 |
gttacaacaaccaatgactccaacattacaaaccaacatgccaacgttactgtcactgtcactcac |
264 |
Q |
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| T |
47706994 |
gttacaacaaccaatgactccaacattacaaaccaacatgccaacgttgctgtcactgtcactcac |
47707059 |
T |
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