View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4976_low_15 (Length: 251)
Name: NF4976_low_15
Description: NF4976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4976_low_15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 16 - 251
Target Start/End: Original strand, 51510372 - 51510607
Alignment:
| Q |
16 |
atgtagagtcagagtataaccgatttgacgccggtacatgtagttacgtccaataattactagttttcaaattattatcggtgtcgtgttgaggcatatg |
115 |
Q |
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| T |
51510372 |
atgtagagtcagagtataaccgatttgacgccggtacatgtagttacgtccaataattactagttttcaaattattatcggtgtcgtgttgaggcatttg |
51510471 |
T |
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| Q |
116 |
tgtcggtgcttcatagacaaggcaatgccttgaaagactgtattggtagtagtagcataccatttcctgaaccagtaaagacaaaaacgagaggacaaat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51510472 |
tgtcggtgcttcatagacaaggcaatgccttgaaagactgtattggtagtagtagcataccatttcctgaaccagtaaagacaaaaacgagaggacaaat |
51510571 |
T |
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| Q |
216 |
ccccaatggcaatccttgagttgcaatttcttcacc |
251 |
Q |
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||||||||||||||||||||||| |||||||||||| |
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| T |
51510572 |
ccccaatggcaatccttgagttgaaatttcttcacc |
51510607 |
T |
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