View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4978-Insertion-10 (Length: 545)

Name: NF4978-Insertion-10
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4978-Insertion-10
NF4978-Insertion-10
[»] chr5 (33 HSPs)
chr5 (8-530)||(10543661-10544182)
chr5 (360-530)||(11242262-11242431)
chr5 (413-530)||(14318382-14318498)
chr5 (365-529)||(2530846-2531009)
chr5 (365-529)||(24395727-24395890)
chr5 (360-509)||(26718892-26719040)
chr5 (360-509)||(26988636-26988784)
chr5 (360-530)||(34425890-34426060)
chr5 (361-530)||(1366470-1366639)
chr5 (413-530)||(2412075-2412191)
chr5 (412-530)||(36868872-36868989)
chr5 (420-509)||(16198798-16198885)
chr5 (420-509)||(9364300-9364387)
chr5 (420-509)||(28822346-28822433)
chr5 (420-509)||(38869367-38869454)
chr5 (420-505)||(40389540-40389623)
chr5 (442-525)||(15639635-15639717)
chr5 (412-530)||(2024638-2024755)
chr5 (438-509)||(27924091-27924160)
chr5 (360-526)||(10407452-10407618)
chr5 (482-528)||(40794391-40794438)
chr5 (420-509)||(16799331-16799418)
chr5 (414-526)||(22648734-22648845)
chr5 (420-509)||(34756370-34756457)
chr5 (438-509)||(7670933-7671002)
chr5 (412-526)||(33037771-33037884)
chr5 (360-403)||(27530608-27530651)
chr5 (420-509)||(27079020-27079107)
chr5 (421-509)||(36187884-36187970)
chr5 (365-397)||(2412204-2412236)
chr5 (438-509)||(19523208-19523277)
chr5 (360-396)||(22875060-22875096)
chr5 (365-401)||(35080720-35080756)
[»] chr6 (15 HSPs)
chr6 (360-530)||(2477531-2477700)
chr6 (420-530)||(20611780-20611889)
chr6 (420-509)||(28075795-28075882)
chr6 (420-528)||(6159430-6159537)
chr6 (420-509)||(20711727-20711814)
chr6 (438-509)||(27788713-27788782)
chr6 (430-527)||(21183692-21183788)
chr6 (412-509)||(33774129-33774224)
chr6 (413-500)||(30121783-30121868)
chr6 (420-509)||(1155856-1155943)
chr6 (420-509)||(13727406-13727493)
chr6 (420-509)||(17353966-17354053)
chr6 (420-509)||(21479506-21479593)
chr6 (420-509)||(21280557-21280644)
chr6 (420-477)||(34397899-34397956)
[»] chr4 (31 HSPs)
chr4 (360-530)||(27112022-27112191)
chr4 (360-526)||(52468282-52468447)
chr4 (360-530)||(39329337-39329507)
chr4 (367-528)||(36118411-36118571)
chr4 (438-526)||(37744934-37745021)
chr4 (420-530)||(51691921-51692032)
chr4 (430-530)||(24396926-24397025)
chr4 (430-529)||(36362887-36362984)
chr4 (430-528)||(40217226-40217323)
chr4 (438-526)||(4167915-4168002)
chr4 (438-509)||(40089530-40089599)
chr4 (420-510)||(32128597-32128685)
chr4 (415-509)||(36178686-36178778)
chr4 (419-509)||(37777228-37777316)
chr4 (430-522)||(2135337-2135428)
chr4 (412-509)||(2790739-2790834)
chr4 (420-509)||(43455537-43455624)
chr4 (420-509)||(34027593-34027680)
chr4 (430-530)||(45656167-45656266)
chr4 (420-509)||(54780791-54780878)
chr4 (363-528)||(10041947-10042113)
chr4 (360-404)||(5893130-5893174)
chr4 (420-509)||(10978914-10979001)
chr4 (420-509)||(34768580-34768667)
chr4 (420-509)||(38209597-38209684)
chr4 (412-509)||(47129001-47129096)
chr4 (438-517)||(35779349-35779427)
chr4 (438-509)||(54083266-54083335)
chr4 (367-404)||(30507071-30507108)
chr4 (421-509)||(37514673-37514759)
chr4 (438-505)||(16882419-16882484)
[»] chr2 (30 HSPs)
chr2 (360-530)||(21665647-21665816)
chr2 (365-526)||(13800495-13800657)
chr2 (360-529)||(38400785-38400954)
chr2 (412-530)||(12134039-12134156)
chr2 (367-530)||(24035498-24035661)
chr2 (360-526)||(16096998-16097164)
chr2 (360-530)||(11912702-11912873)
chr2 (420-509)||(24410445-24410532)
chr2 (446-530)||(37182656-37182739)
chr2 (438-509)||(9046037-9046106)
chr2 (413-530)||(16227368-16227484)
chr2 (420-509)||(10762572-10762659)
chr2 (360-400)||(11952535-11952575)
chr2 (438-509)||(26716136-26716205)
chr2 (365-442)||(44914855-44914932)
chr2 (367-530)||(28425660-28425826)
chr2 (420-509)||(29939869-29939956)
chr2 (360-397)||(12133982-12134019)
chr2 (360-401)||(12694794-12694835)
chr2 (360-400)||(37182760-37182800)
chr2 (420-509)||(3155225-3155312)
chr2 (420-509)||(4505902-4505989)
chr2 (420-509)||(6965015-6965102)
chr2 (438-530)||(7742159-7742250)
chr2 (412-509)||(8907078-8907173)
chr2 (413-459)||(42029201-42029247)
chr2 (441-509)||(22727530-22727596)
chr2 (360-400)||(7742075-7742115)
chr2 (438-509)||(27506765-27506834)
chr2 (360-404)||(42029261-42029305)
[»] chr1 (28 HSPs)
chr1 (360-526)||(45758496-45758664)
chr1 (360-528)||(6221678-6221844)
chr1 (412-530)||(39134720-39134838)
chr1 (365-526)||(5533314-5533475)
chr1 (420-509)||(9173029-9173116)
chr1 (420-509)||(9181011-9181098)
chr1 (430-530)||(26803946-26804042)
chr1 (420-530)||(38547042-38547151)
chr1 (420-509)||(17168976-17169063)
chr1 (420-509)||(27559657-27559744)
chr1 (412-524)||(38853527-38853637)
chr1 (430-530)||(33170757-33170856)
chr1 (420-508)||(1366884-1366970)
chr1 (438-509)||(40501814-40501883)
chr1 (365-504)||(35392295-35392431)
chr1 (420-509)||(5316700-5316787)
chr1 (412-509)||(16140075-16140170)
chr1 (420-509)||(23185447-23185534)
chr1 (438-506)||(19955740-19955806)
chr1 (421-508)||(6771812-6771897)
chr1 (438-528)||(10925978-10926067)
chr1 (483-526)||(43235837-43235881)
chr1 (420-518)||(50881440-50881537)
chr1 (438-508)||(21740961-21741029)
chr1 (420-509)||(4971624-4971711)
chr1 (420-509)||(44655761-44655848)
chr1 (421-509)||(14146320-14146406)
chr1 (438-509)||(51607463-51607533)
[»] scaffold1320 (1 HSPs)
scaffold1320 (365-525)||(1346-1506)
[»] chr8 (28 HSPs)
chr8 (365-525)||(15078750-15078910)
chr8 (412-528)||(15167414-15167529)
chr8 (364-526)||(7944472-7944634)
chr8 (360-529)||(39332354-39332520)
chr8 (412-530)||(41677172-41677290)
chr8 (438-530)||(5942683-5942774)
chr8 (412-523)||(8102906-8103016)
chr8 (365-526)||(5973058-5973219)
chr8 (420-509)||(23798268-23798355)
chr8 (412-526)||(11290175-11290288)
chr8 (414-528)||(25561496-25561607)
chr8 (421-530)||(5721546-5721654)
chr8 (420-509)||(23606636-23606723)
chr8 (360-497)||(30674349-30674485)
chr8 (412-509)||(41879190-41879285)
chr8 (438-509)||(10917400-10917469)
chr8 (438-509)||(42600791-42600860)
chr8 (360-509)||(34789808-34789956)
chr8 (420-509)||(45475826-45475913)
chr8 (364-404)||(5942780-5942820)
chr8 (360-526)||(14509926-14510094)
chr8 (360-403)||(34048654-34048697)
chr8 (413-460)||(34868177-34868224)
chr8 (420-509)||(5860751-5860838)
chr8 (430-530)||(23941108-23941207)
chr8 (420-509)||(30883338-30883425)
chr8 (365-401)||(4097821-4097857)
chr8 (360-400)||(38009097-38009137)
[»] chr7 (26 HSPs)
chr7 (361-521)||(23020430-23020589)
chr7 (369-530)||(27237378-27237538)
chr7 (365-530)||(23859060-23859225)
chr7 (412-530)||(36891565-36891682)
chr7 (430-530)||(9021816-9021914)
chr7 (412-530)||(7398438-7398555)
chr7 (413-528)||(6765680-6765794)
chr7 (360-528)||(12981315-12981481)
chr7 (412-522)||(2611260-2611369)
chr7 (438-509)||(23551095-23551164)
chr7 (363-501)||(21763537-21763672)
chr7 (438-509)||(20091305-20091374)
chr7 (430-528)||(20153190-20153287)
chr7 (438-509)||(48983868-48983937)
chr7 (420-509)||(24525691-24525778)
chr7 (367-530)||(12419447-12419610)
chr7 (438-509)||(38414900-38414969)
chr7 (369-506)||(23744808-23744944)
chr7 (420-509)||(29077229-29077316)
chr7 (421-509)||(10955493-10955579)
chr7 (367-404)||(38971365-38971402)
chr7 (483-530)||(9014829-9014877)
chr7 (438-509)||(47984994-47985063)
chr7 (420-509)||(8171545-8171632)
chr7 (420-509)||(18776772-18776859)
chr7 (365-399)||(26917681-26917715)
[»] scaffold1590 (1 HSPs)
scaffold1590 (412-530)||(257-374)
[»] scaffold0007 (1 HSPs)
scaffold0007 (412-530)||(230858-230975)
[»] scaffold0097 (2 HSPs)
scaffold0097 (420-528)||(38914-39021)
scaffold0097 (364-400)||(39045-39081)
[»] scaffold0012 (1 HSPs)
scaffold0012 (365-522)||(206440-206597)
[»] chr3 (24 HSPs)
chr3 (367-530)||(26279530-26279694)
chr3 (420-516)||(54407165-54407259)
chr3 (363-499)||(32319106-32319239)
chr3 (420-509)||(43207245-43207331)
chr3 (412-509)||(8073337-8073432)
chr3 (412-526)||(8420320-8420433)
chr3 (420-530)||(28689368-28689477)
chr3 (412-530)||(54574826-54574943)
chr3 (420-506)||(34290643-34290727)
chr3 (420-509)||(44708489-44708576)
chr3 (420-509)||(53506891-53506978)
chr3 (438-510)||(9878712-9878782)
chr3 (421-509)||(47467696-47467782)
chr3 (367-526)||(52374650-52374810)
chr3 (412-509)||(21582783-21582878)
chr3 (420-509)||(37168379-37168466)
chr3 (420-509)||(38681100-38681187)
chr3 (420-509)||(54619210-54619297)
chr3 (412-477)||(42453446-42453511)
chr3 (360-530)||(25855412-25855581)
chr3 (367-526)||(49393085-49393242)
chr3 (412-509)||(3953895-3953990)
chr3 (360-400)||(23641263-23641303)
chr3 (438-509)||(50939258-50939327)
[»] scaffold0018 (1 HSPs)
scaffold0018 (420-530)||(173517-173626)
[»] scaffold0182 (1 HSPs)
scaffold0182 (413-530)||(23993-24109)
[»] scaffold0039 (1 HSPs)
scaffold0039 (412-509)||(106547-106642)
[»] scaffold0227 (1 HSPs)
scaffold0227 (462-528)||(16016-16081)
[»] scaffold0022 (2 HSPs)
scaffold0022 (365-404)||(40201-40240)
scaffold0022 (365-404)||(138261-138300)


Alignment Details
Target: chr5 (Bit Score: 415; Significance: 0; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 8 - 530
Target Start/End: Complemental strand, 10544182 - 10543661
Alignment:
Q  8 gttccaaagatcaacagacccctcaaggtgtctttgttattgtaaacttagcaaacgatttattatataggaacatagattagttaaagtaactaatcaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10544182 gttccaaagatcaacagacccctcaaggtgtctttgttattgtaaacttagcaaacgatttattatataggaacatagattagttaaagtaactaatcag 10544083  T
Q  108 tatctaaaattagatttagatctgtttcttatgcgtaattatattatgtgtgaattggtcacaaccatacaaattgataagcactcgccaaatatggcca 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10544082 tatctaaaattagatttagatctgtttcttatgcgtaattatattatgtgtgaattggtcacaaccatacaaatggataagcactcgccaaatatggcca 10543983  T
Q  208 tcttctttttactccttgtgtctatccaattagcatgaataagctttctgactttatacaagtatatatatcaggttaaa-ttcnnnnnnnnnnngaccg 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||            |||||    
T  10543982 tcttctttttactccttgtgtctatccaattagcatgaataagctttctgactttatacaagtatatatatcaggttaaatttttatttttttttgaccg 10543883  T
Q  307 aagttaaattcttaatttgctattatggcaatatacagggccgttcctacgaatcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtann 406  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||      
T  10543882 aagttaaattcttaatttgctattatggcaatatacatgcccgttcctacgaatcggttctataagtgaaaagagatccgtaataaaataaaaatgtatt 10543783  T
Q  407 nnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtata 506  Q
          |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  10543782 ttttttaaagaataatgttccacttaaattttttaaaagataaatataaggtgatgtatatatgcgatacatcc--aaaggtgaaaatcactaccgtata 10543685  T
Q  507 cataggaacctcaaaccaccctcc 530  Q
    |||||||| |||||||||||||||    
T  10543684 cataggaatctcaaaccaccctcc 10543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 530
Target Start/End: Original strand, 11242262 - 11242431
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    |||| ||||||||||||||||||  |||||||||||||||| |||       ||||||| ||||||| | |||| || ||||||||||||||| ||  ||    
T  11242262 tcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattcttttaaaagaacaatgttctatttaatttttttaaaagataaatacaaaatg 11242361  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||||||||| |||||| ||  |||| || ||||||||||||||||||| |||||||||||||||||||||    
T  11242362 atgtatatatgtgatacaacc--aaagatggaaatcactaccgtatacatgaggaacctcaaaccaccctcc 11242431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 413 - 530
Target Start/End: Original strand, 14318382 - 14318498
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-ag 511  Q
    |||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||| ||||||||||||||  |||||||||||||||||||||| ||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaa--tgaaaatcactaccgtatacatgag 14318479  T
Q  512 gaacctcaaaccaccctcc 530  Q
    |||||||||||||||||||    
T  14318480 gaacctcaaaccaccctcc 14318498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 365 - 529
Target Start/End: Original strand, 2530846 - 2531009
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    |||||||||||||||||  |||||||||||||||||||||        ||||||| ||||||| | |||| || ||||||||||||||| || |||  ||    
T  2530846 tctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaa-aatgttctatttaagttttttaaaagataaatacaatgtgtcgt 2530944  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctc 529  Q
    |||||| || |||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||    
T  2530945 atatatacggtacatcc--aaaggtgaaaatcactactgtatacatgaggaacctcaaaccaccctc 2531009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 365 - 529
Target Start/End: Complemental strand, 24395890 - 24395727
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgta 464  Q
    ||||||| | |||||| | |||||||||||||||||||||        ||| |||||||||| | ||||||| ||||||||||||||| |||||| ||||    
T  24395890 tctgtaaataaaaagaaacccgtaataaaataaaaatgtattttttttaaaaaataatgttctatttaaattttttaaaagataaatacaaggtgttgta 24395791  T
Q  465 tatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctc 529  Q
    ||||| | ||||||||  ||||||||||||||| |||||||| || |||||| | |||||||||||    
T  24395790 tatatacaatacatcc--aaaggtgaaaatcaccaccgtatagatgaggaactttaaaccaccctc 24395727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 509
Target Start/End: Original strand, 26718892 - 26719040
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||         |||||||||||||| | ||||| | ||||||||||||||| || ||    
T  26718892 tcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaaatttttaaaagataaatacaaagt 26718991  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |  ||||||||||||||||  |  |||||||||||||||||||| ||||||    
T  26718992 gtcgtatatatgcgataca--ctcaaaggtgaaaatcactaccgcatacat 26719040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 509
Target Start/End: Original strand, 26988636 - 26988784
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||         |||||||||||||| | ||||| | ||||||||||||||| || ||    
T  26988636 tcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaaatttttaaaagataaatacaaagt 26988735  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |  ||||||||||||||||  |  |||||||||||||||||||| ||||||    
T  26988736 gtcgtatatatgcgataca--ctcaaaggtgaaaatcactaccgcatacat 26988784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 360 - 530
Target Start/End: Complemental strand, 34426060 - 34425890
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    ||||||||||||||||||| |||   |||||||||||||||||||        ||||||| ||||||| | || |||| ||||||||||||||| |||||    
T  34426060 tcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatcttttttaaaagaacaatgttctatttcaattttttaaaagataaatacaaggt 34425961  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    |  ||||||||| ||||||  |  |||| | ||||||| |||||||||||| |||||||||||||||||||||    
T  34425960 gccgtatatatgtgataca--cctaaagattaaaatcattaccgtatacatgaggaacctcaaaccaccctcc 34425890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 361 - 530
Target Start/End: Original strand, 1366470 - 1366639
Alignment:
Q  361 cggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||||| ||||||| ||||||| |||||||||| |||        ||||||| ||||||| | ||||||| |||| |||||||||| ||| ||    
T  1366470 cggttctgtaagtaaaaagaggtccgtaaaaaaataaaaacgtattttttttaaaagaacaatgttctatttaaattttttataagataaatacaagatg 1366569  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
      ||||||||||||||||  |  ||| |||||||||||||||||||| || |||||||||| ||||||||||    
T  1366570 tggtatatatgcgataca--cctaaatgtgaaaatcactaccgtatatatgaggaacctcataccaccctcc 1366639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 413 - 530
Target Start/End: Complemental strand, 2412191 - 2412075
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-ag 511  Q
    |||||| ||||||| | ||||||| ||||||| ||||||| || |||  ||||||||||||| |||||  ||| |||||||||||||| |||||||| ||    
T  2412191 aaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatcc--aaatgtgaaaatcactactgtatacatgag 2412094  T
Q  512 gaacctcaaaccaccctcc 530  Q
    |||||||||||||||||||    
T  2412093 gaacctcaaaccaccctcc 2412075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 36868872 - 36868989
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | |||| || ||||||||||||||| ||||||  ||||||||| | |||| ||  ||| ||||||||||||||||||||||| |    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacaccc--aaatgtgaaaatcactaccgtatacatga 36868969  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    |||| |||||||||||||||    
T  36868970 ggaatctcaaaccaccctcc 36868989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 16198798 - 16198885
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||| ||||||||||||||    
T  16198798 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacaccc--aaaggtgaaaatgactaccgtatacat 16198885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 9364387 - 9364300
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  9364387 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 9364300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 28822346 - 28822433
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  28822346 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 28822433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 38869367 - 38869454
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  38869367 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 38869454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 505
Target Start/End: Original strand, 40389540 - 40389623
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtat 505  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||    
T  40389540 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtat 40389623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 525
Target Start/End: Complemental strand, 15639717 - 15639635
Alignment:
Q  442 aaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccac 525  Q
    ||||||||||| ||||||| |||||||||||||||||||  |||| |||||||||||  ||||||||| |||||||| |||||||    
T  15639717 aaagataaatacaaggtgacgtatatatgcgatacatcc--aaagatgaaaatcactgtcgtatacataaggaaccttaaaccac 15639635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 2024638 - 2024755
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| ||| ||||||||||| || |||  ||||||||| |||||| ||  |||| |||||||||||||| ||||||| |    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacaccc--aaagatgaaaatcactaccatatacatga 2024735  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    ||| |||||||||| |||||    
T  2024736 ggatcctcaaaccatcctcc 2024755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 27924160 - 27924091
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||||||  |||||| ||||| ||||||||||||||    
T  27924160 tttaaaagataaatataaggtgccgtatatatgcggtacatcc--aaaggtaaaaatgactaccgtatacat 27924091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 10407618 - 10407452
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||||||| ||||||||||||| ||| |||||||||||||| |||        ||||||| ||||||| | ||||||| ||||||||||||| | |||||    
T  10407618 tcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctatttaaattttttaaaagataaacacaaggt 10407519  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    |  ||| |||||   |||||| ||||  |||||||| |||||||||| ||| ||||| ||| |||||||    
T  10407518 gtcgtacatatgttgtacatctaaaa--gtgaaaattactaccgtatgcatgaggaatctccaaccacc 10407452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 528
Target Start/End: Original strand, 40794391 - 40794438
Alignment:
Q  482 aaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  40794391 aaaaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccct 40794438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 16799331 - 16799418
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||| ||||||||||||||  ||||||||||| |||| ||  |||||||||||| | ||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgattaccgtatacat 16799418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 526
Target Start/End: Original strand, 22648734 - 22648845
Alignment:
Q  414 aagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-agg 512  Q
    ||||| ||||||| | ||||||| ||||||||||||||| || |||  ||||||||| |  ||||||  |||||||| ||||||||| ||||| || ||     
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatcc--aaaggtgacaatcactactgtataaataaga 22648831  T
Q  513 aacctcaaaccacc 526  Q
    ||||||||||||||    
T  22648832 aacctcaaaccacc 22648845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 34756370 - 34756457
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  34756370 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 34756457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 7671002 - 7670933
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  |||||| | || |||| |||||  ||||||||| ||||||||||||||    
T  7671002 tttaaaagataaatataaggtgccgtatatttacggtacacccaaa--ggtgaaaatgactaccgtatacat 7670933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 526
Target Start/End: Complemental strand, 33037884 - 33037771
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||  | ||||||| ||||||||||||||| ||| |   |||||||||   |||| ||  ||||||||||| || |||||||||||| |    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacaccc--aaaggtgaaaaccattaccgtatacatga 33037787  T
Q  511 ggaacctcaaaccacc 526  Q
    ||||||||||||||||    
T  33037786 ggaacctcaaaccacc 33037771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Complemental strand, 27530651 - 27530608
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgt 403  Q
    |||||||| |||||||||||||  ||||||||||||||||||||    
T  27530651 tcggttctataagtgaaaagaggcccgtaataaaataaaaatgt 27530608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 27079107 - 27079020
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| ||||  |  |||||||||||| ||||| ||||||||    
T  27079107 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca--cctaaaggtgaaaatgactactgtatacat 27079020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 509
Target Start/End: Original strand, 36187884 - 36187970
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | ||| ||| ||||||| ||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  36187884 atgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 36187970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 397
Target Start/End: Complemental strand, 2412236 - 2412204
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataa 397  Q
    ||||||||||||||||| |||||||||||||||    
T  2412236 tctgtaagtgaaaagaggtccgtaataaaataa 2412204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 19523277 - 19523208
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| |||||| |||||||    
T  19523277 tttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccatatacat 19523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 396
Target Start/End: Complemental strand, 22875096 - 22875060
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaata 396  Q
    ||||||||||||||||||||||| | |||||||||||    
T  22875096 tcggttctgtaagtgaaaagagaacagtaataaaata 22875060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 35080720 - 35080756
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaat 401  Q
    |||||||||||||||||  ||||||||||||||||||    
T  35080720 tctgtaagtgaaaagagggccgtaataaaataaaaat 35080756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 530
Target Start/End: Original strand, 2477531 - 2477700
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||       ||| ||| ||||||| | ||||||| ||||||||||||||| ||||||    
T  2477531 tcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttttttaaacgaacaatgttcaatttaaattttttaaaagataaatacaaggtg 2477630  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    |  |||||||||||||||  | |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  2477631 acatatatatgcgataca--ccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 2477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 420 - 530
Target Start/End: Complemental strand, 20611889 - 20611780
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| ||||||||| |||||| |||||||| ||||||  |||||||| ||| |||||||||  |||||||||||||||||||||||| |||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaa--ggtgaaaatcactaccgtatacatgaggaacctc 20611792  T
Q  519 aaaccaccctcc 530  Q
    |||| |||||||    
T  20611791 aaactaccctcc 20611780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 28075882 - 28075795
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||| ||||||||||||||    
T  28075882 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacaccc--aaaggtgaaaatgactaccgtatacat 28075795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 6159537 - 6159430
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||| ||| ||||||||||||||| || |||  ||||||||||| ||||| |  ||||||| |||||||||||||||| || |||||||||    
T  6159537 aatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattc--aaaggtggaaatcactaccgtatatataaggaacctc 6159440  T
Q  519 aaaccaccct 528  Q
    ||||||||||    
T  6159439 aaaccaccct 6159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 20711727 - 20711814
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  20711727 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 20711814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 27788713 - 27788782
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  27788713 tttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 27788782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 430 - 527
Target Start/End: Original strand, 21183692 - 21183788
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccc 527  Q
    ||||||| ||||||||||||||| || ||   ||||||||| | |||| |||||  | |||||||||||||||||||||| ||||||||||||||||||    
T  21183692 ttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaa--gttgaaaatcactaccgtatacatgaggaacctcaaaccaccc 21183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 33774224 - 33774129
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| |||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  ||| |||||||| ||||||||||||||    
T  33774224 aaaagagtaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--aaatgtgaaaatgactaccgtatacat 33774129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 500
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactac 500  Q
    |||||| ||||||  | ||||||| ||||||| ||||||| ||||||   ||||||||||||||||||  ||||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatcc--aaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 1155856 - 1155943
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||   |||||||||| |||||||  | |||||||||| ||||||||||||||    
T  1155856 aatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatcc--agaggtgaaaatgactaccgtatacat 1155943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 13727406 - 13727493
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  13727406 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 13727493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 17354053 - 17353966
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  ||| |||||||| |||| |||||||||    
T  17354053 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaatgtgaaaatgactatcgtatacat 17353966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 21479593 - 21479506
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  21479593 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 21479506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 21280644 - 21280557
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||| ||||| ||||||||||||||    
T  21280644 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtaaaaatgactaccgtatacat 21280557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 477
Target Start/End: Complemental strand, 34397956 - 34397899
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgataca 477  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  34397956 aatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtaca 34397899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 3e-37; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 530
Target Start/End: Complemental strand, 27112191 - 27112022
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||       ||| ||| ||||||| | ||||||| ||||||||||||||| ||||||    
T  27112191 tcggttctgtaagtgaaaagagacccgtaataaaataagattgtatttttttaaacgaacaatgttcaatttaaattttttaaaagataaatacaaggtg 27112092  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    |  |||||||||||||||  | |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  27112091 acatatatatgcgataca--ccaaaatgtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 27112022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 52468447 - 52468282
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    |||| |||||| |||||||||| || ||||||||||||||| |||       ||||||| ||||||| | ||||||| ||||||||||||||| ||||||    
T  52468447 tcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtatttttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtg 52468348  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
      |||||||||  ||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||    
T  52468347 ccgtatatatgttatacatcc--aaaggtgaaaatcactaccgtatgcatgaggaacctcaaaccacc 52468282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 360 - 530
Target Start/End: Original strand, 39329337 - 39329507
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||||||||||||||||||||| ||||||||||||||||||  ||        ||||||| |||||||   ||||||| ||||||||||||||| |||||    
T  39329337 tcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaattttttaaaagataaatacaaggt 39329436  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctcaaaccaccctcc 530  Q
    | |||||||||| |||||| ||  |||| ||||||||  |||||||||||  |||||| ||||||||||||||    
T  39329437 gttgtatatatgtgatacaccc--aaagatgaaaatccataccgtatacaggaggaacatcaaaccaccctcc 39329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 367 - 528
Target Start/End: Original strand, 36118411 - 36118571
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtata 466  Q
    |||||||||||||||   |||||||||||||||| |||       ||| ||| ||||||| | ||||||| ||||||||||||||| ||||||  |||||    
T  36118411 tgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttaaatgaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtata 36118510  T
Q  467 tatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    |||| |||||| ||||| |  |||||||||||||||||||||| || |||||| |||||||||    
T  36118511 tatgtgatacacccaaata--tgaaaatcactaccgtatacatgagtaacctctaaccaccct 36118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 438 - 526
Target Start/End: Original strand, 37744934 - 37745021
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||||||||||||||||||||||  | |||||||||||||||||  ||||||||||||||||||||||||| | |||||||||||||||||    
T  37744934 tttaaaagataaatataaggtgtcgcatatatgcgatacatcc--aaaggtgaaaatcactaccgtatacttgaggaacctcaaaccacc 37745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 51691921 - 51692032
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctc 518  Q
    ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||| |||| | ||||| ||||||||||||||| ||||||  | |||||||    
T  51691921 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatgaacctc 51692020  T
Q  519 aaaccaccctcc 530  Q
    ||||||||||||    
T  51692021 aaaccaccctcc 51692032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 430 - 530
Target Start/End: Complemental strand, 24397025 - 24396926
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||||||||||  ||||||||| ||||||  |  ||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  24397025 ttaaattttttaaaagataaatataaggtgcagtatatatgtgataca--ctcaaaggtgaaaatcactatcgtatacatgaggaacctcaaactaccct 24396928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 430 - 529
Target Start/End: Original strand, 36362887 - 36362984
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacataggaacctcaaaccaccctc 529  Q
    ||||||| ||||||||||||||| || |||  |||||||||| ||||| |||||   ||| ||||||||||| |||||||||||||||||||||||||||    
T  36362887 ttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaat--gtggaaatcactaccatatacataggaacctcaaaccaccctc 36362984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 430 - 528
Target Start/End: Complemental strand, 40217323 - 40217226
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||  |||| ||||||||| || | ||||||| || ||||||||||||||||    
T  40217323 ttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatcc--aaagatgaaaatcattagcatatacatgagtaacctcaaaccaccct 40217226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 438 - 526
Target Start/End: Original strand, 4167915 - 4168002
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||||||||||||||| ||||||  |||||||||||||||| ||  ||||||||||||||||||| ||||||| |||||||||||| ||||    
T  4167915 tttaaaagataaatacaaggtgccgtatatatgcgatacaccc--aaaggtgaaaatcactaccttatacatgaggaacctcaaatcacc 4168002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 40089599 - 40089530
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||||||    
T  40089599 tttaaaagataaatataaggtgccgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtatacat 40089530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 420 - 510
Target Start/End: Complemental strand, 32128685 - 32128597
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacata 510  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| |||||||||||||||    
T  32128685 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacata 32128597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 415 - 509
Target Start/End: Complemental strand, 36178778 - 36178686
Alignment:
Q  415 agaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||| ||||||| | ||||||| ||||||||||||||| ||||||  |||||||||||||||| ||  ||| ||||||||||||||| |||||||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacaccc--aaatgtgaaaatcactaccttatacat 36178686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 419 - 509
Target Start/End: Original strand, 37777228 - 37777316
Alignment:
Q  419 taatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  37777228 taatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 37777316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 430 - 522
Target Start/End: Original strand, 2135337 - 2135428
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaac 522  Q
    ||||||| ||||||||||||||| ||||||  |||||||||||||||||||  |||||| || ||||||| |||||| || |||||||||||||    
T  2135337 ttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatcc--aaaggtaaacatcactatcgtatatatgaggaacctcaaac 2135428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 509
Target Start/End: Original strand, 2790739 - 2790834
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||| | ||| ||| |||||||||||||||||||||   ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 2790834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 43455537 - 43455624
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  43455537 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 43455624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 34027680 - 34027593
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||| ||||||||    
T  34027680 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactacggtatacat 34027593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 530
Target Start/End: Complemental strand, 45656266 - 45656167
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||  ||||||   ||||||||||||| ||||  ||| ||||||||||| | ||||||||| | |||||||||||||||||    
T  45656266 ttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatcc--aaatgtgaaaatcacgaacgtatacatgacgaacctcaaaccaccct 45656169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 54780878 - 54780791
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  54780878 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 54780791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 363 - 528
Target Start/End: Original strand, 10041947 - 10042113
Alignment:
Q  363 gttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn--aaaagaataatgttccacttaaattgtttaaaagataaatataaggtga 460  Q
    ||||||||||||||||||| |||||| ||||||||||  |||         ||||||| ||||||| | ||||||| || |||| ||||||| ||||||     
T  10041947 gttctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgc 10042046  T
Q  461 tgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctcaaaccaccct 528  Q
     |||| |||| |||||| | |||   ||||||||||||||||||||||  |||||||||||| ||||||    
T  10042047 cgtatgtatgtgatacacctaaat--gtgaaaatcactaccgtatacaggaggaacctcaaatcaccct 10042113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 5893174 - 5893130
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||    
T  5893174 tcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgta 5893130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 10979001 - 10978914
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||| ||  |||||||| ||||||||||||||    
T  10979001 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaa--gtgaaaatgactaccgtatacat 10978914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 34768580 - 34768667
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  | |||||||||| | ||||||||||||    
T  34768580 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--agaggtgaaaatgattaccgtatacat 34768667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 38209597 - 38209684
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  38209597 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 38209684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 47129096 - 47129001
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||| ||||| ||||||||||||||    
T  47129096 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtaaaaatgactaccgtatacat 47129001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 517
Target Start/End: Original strand, 35779349 - 35779427
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacct 517  Q
    ||||||||||||||| ||||||  ||||||||||| |||| ||  |||||||||||| | |||||||||||| ||||||||    
T  35779349 tttaaaagataaatacaaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgattaccgtatacatgaggaacct 35779427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 54083266 - 54083335
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||| | ||||| ||||||||||||||    
T  54083266 tttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaagataaaaatgactaccgtatacat 54083335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 404
Target Start/End: Original strand, 30507071 - 30507108
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    |||||||||||||||| || ||||||||||||||||||    
T  30507071 tgtaagtgaaaagagacccataataaaataaaaatgta 30507108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 37514759 - 37514673
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| ||||  |  | |||||||||| ||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca--ctcagaggtgaaaatgactaccgtatacat 37514673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 505
Target Start/End: Original strand, 16882419 - 16882484
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtat 505  Q
    ||||||||||||||||||||||  || ||||| || ||||  | ||||||||||||| ||||||||||    
T  16882419 tttaaaagataaatataaggtgccgtgtatatacggtaca--ccaaaaggtgaaaatgactaccgtat 16882484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 3e-37; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 530
Target Start/End: Original strand, 21665647 - 21665816
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    |||| |||||||||||||||||| |||||||||||||||||||||       ||||||| ||||||| | ||||||| ||||||||||||||| | ||||    
T  21665647 tcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtatttttttaaaagaacaatgttctatttaaattttttaaaagataaatacacggtg 21665746  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
      ||||||||| ||||||||  |||| ||||||||||||||||||||||| ||||||| |||||||||||||    
T  21665747 tcgtatatatgtgatacatc--aaaatgtgaaaatcactaccgtatacatgaggaaccacaaaccaccctcc 21665816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 365 - 526
Target Start/End: Original strand, 13800495 - 13800657
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaa-gaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    ||||||||||||||||| | ||||||||||||||||||||       |||| ||| ||||||| | ||||||| ||||||||||||||||||||||  ||    
T  13800495 tctgtaagtgaaaagaggttcgtaataaaataaaaatgtatttttttaaaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgt 13800594  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctcaaaccacc 526  Q
    |||||||||||||| || |||||||||||||||||||  ||||||  |||||||||||| ||||    
T  13800595 atatatgcgataca-cccaaaaggtgaaaatcactactatatacacgaggaacctcaaatcacc 13800657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 360 - 529
Target Start/End: Complemental strand, 38400954 - 38400785
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaa-aagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||| |||||||||||||||||| ||| |||||||||||||  ||        | ||||| ||||||| | ||||||| ||||||||||||||| |||||    
T  38400954 tcggctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaattttttaaaagataaatacaaggt 38400855  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctc 529  Q
    |   |||||||||||||||| |  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38400854 gtcatatatatgcgatacattc--aaaggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctc 38400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 12134039 - 12134156
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-ta 510  Q
    ||||||| ||||||| | |||||   ||||||||||||||| |||||   |||||||||||||||| ||||||  |||||||||||||||||||||| ||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaa--gtgaaaatcactaccgtatacatta 12134136  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    ||||||||||||||||||||    
T  12134137 ggaacctcaaaccaccctcc 12134156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 367 - 530
Target Start/End: Original strand, 24035498 - 24035661
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtat 465  Q
    ||||||||||||||   ||||||||||||||||| |||        ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||    
T  24035498 tgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtat 24035597  T
Q  466 atatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    | ||||||||||  |  |||||||||||||||||||| |||||| ||||| | |||||||||||||    
T  24035598 aaatgcgataca--cctaaaggtgaaaatcactaccgcatacatgaggaatcgcaaaccaccctcc 24035661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 16097164 - 16096998
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||| ||||||||||||||| |  ||||||||||||||| |||||        ||||||| ||||||| | ||||||| ||||||||||||||| |||||    
T  16097164 tcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggt 16097065  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    |  |||||||||   |||| ||  |||||||||||| |||||| ||||||| |||||||||||||||||    
T  16097064 gccgtatatatgatgtacaccc--aaaggtgaaaattactaccttatacatgaggaacctcaaaccacc 16096998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 360 - 530
Target Start/End: Original strand, 11912702 - 11912873
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa--tgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataagg 457  Q
    |||| ||| |||||||||||| |||||||||||||||||||  | ||        |||||| ||||||| | |||||||    |||| ||||||| || |    
T  11912702 tcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctatttaaatttaaaaaaaaataaatacaaag 11912801  T
Q  458 tgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||  |||||||||| ||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||    
T  11912802 tgccgtatatatgcaatacatccaaaga--tgaaaatcactaccgtatacataaggaacctcaaaccaccctcc 11912873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 24410532 - 24410445
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  24410532 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 24410445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 446 - 530
Target Start/End: Complemental strand, 37182739 - 37182656
Alignment:
Q  446 ataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||||| ||||||  |||||||||| ||||| ||||||  ||||||||||||||||||||||| |||||||||||| ||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaa--gtgaaaatcactaccgtatacatgaggaacctcaaatcaccctcc 37182656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 9046106 - 9046037
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  9046106 tttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 9046037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 530
Target Start/End: Original strand, 16227368 - 16227484
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-ag 511  Q
    |||||| ||| ||| | ||||||| ||||||||||||||| ||||||  ||||||||| ||||||  |  | || |||||||||||||  ||||||| ||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgataca--ccgatagatgaaaatcactactatatacataag 16227465  T
Q  512 gaacctcaaaccaccctcc 530  Q
    |||||||||||||||||||    
T  16227466 gaacctcaaaccaccctcc 16227484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 10762572 - 10762659
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||| | |||| ||  |||||||||||| ||||||||||||||    
T  10762572 aatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacaccc--aaaggtgaaaatgactaccgtatacat 10762659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 11952535 - 11952575
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  11952535 tcggttctgtaagtgaaaagagacccgtaataaaataaaaa 11952575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 26716205 - 26716136
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||   |||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  26716205 tttaaaagataaatataaggtgccatatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 26716136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 44914855 - 44914932
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaa 442  Q
    ||||||||||||||||| ||||||||||||||||||||||       ||||||| ||||||| | ||||||| |||||    
T  44914855 tctgtaagtgaaaagaggtccgtaataaaataaaaatgtacttttttaaaagaacaatgttctatttaaattttttaa 44914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 530
Target Start/End: Original strand, 28425660 - 28425826
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn----aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatg 462  Q
    ||||| ||||||||| ||||||||||||||||||||||           ||||||| ||||||| | |||||   ||||||||||||||| ||||||  |    
T  28425660 tgtaaatgaaaagaggtccgtaataaaataaaaatgtatttttttttttaaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcg 28425759  T
Q  463 tatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    |||||||||  |||| ||  ||| ||||||||||||||| |||| || ||||||||||| || ||||||    
T  28425760 tatatatgcagtacaccc--aaatgtgaaaatcactaccatatatatgaggaacctcaagcctccctcc 28425826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 29939869 - 29939956
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| |||| |||||||||| ||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  29939869 aatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 29939956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 397
Target Start/End: Original strand, 12133982 - 12134019
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataa 397  Q
    |||||||||||||||||||||| |||||||||||||||    
T  12133982 tcggttctgtaagtgaaaagaggtccgtaataaaataa 12134019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 360 - 401
Target Start/End: Complemental strand, 12694835 - 12694794
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaat 401  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  12694835 tcggctctgtaagtgaaaagagacccgtaataaaataaaaat 12694794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 400
Target Start/End: Complemental strand, 37182800 - 37182760
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  37182800 tcggctctgtaagtgaaaagagacccgtaataaaataaaaa 37182760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 3155312 - 3155225
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| ||||  |  | |||||||||| ||||||||||||||    
T  3155312 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaca--cctagaggtgaaaatgactaccgtatacat 3155225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 4505989 - 4505902
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||| ||||| ||||||||||||||    
T  4505989 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtaaaaatgactaccgtatacat 4505902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 6965102 - 6965015
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| || |||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  6965102 aatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 6965015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 438 - 530
Target Start/End: Original strand, 7742159 - 7742250
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||||||||||||| || |||   |||||||||| |||||||  |||||||||||  |||| ||||| ||| |||||||||||||||| ||||    
T  7742159 tttaaaagataaatacaatgtgtcatatatatgcgttacatcc--aaaggtgaaaaatactatcgtatgcatgaggaacctcaaaccactctcc 7742250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 509
Target Start/End: Original strand, 8907078 - 8907173
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| |||||||| | ||| ||| ||||||||||||||| |||| |  ||||||||||| |||| ||  | |||| ||||| ||||||||||||||    
T  8907078 aaaagagtaatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacaccc--agaggtaaaaatgactaccgtatacat 8907173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 42029247 - 42029201
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||||||    
T  42029247 aaagaacaatgttctatttaaattttttaaaagataaatataaggtg 42029201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 509
Target Start/End: Original strand, 22727530 - 22727596
Alignment:
Q  441 aaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||  | |||| ||||||||||| |||| ||||||  ||||||||||||||| |||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaa--gtgaaaatcactaccatatacat 22727596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 7742075 - 7742115
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    ||||||||||||||||||||||  |||| ||||||||||||    
T  7742075 tcggttctgtaagtgaaaagaggcccgtgataaaataaaaa 7742115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 27506765 - 27506834
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||| | |||| ||  |||||| ||||| ||||| ||||||||    
T  27506765 tttaaaagataaatataaggtgccgtatatatgtggtacaccc--aaaggtaaaaatgactactgtatacat 27506834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 404
Target Start/End: Complemental strand, 42029305 - 42029261
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    |||||| ||||||||||||||| | |||||||| |||||||||||    
T  42029305 tcggttttgtaagtgaaaagaggttcgtaataatataaaaatgta 42029261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 1e-30; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 360 - 526
Target Start/End: Complemental strand, 45758664 - 45758496
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn---aaaagaataatgttccacttaaattgtttaaaagataaatataag 456  Q
    |||| ||||||||||||||||| |||| |||||||||||||||||          ||||||| ||||||| | ||||||| ||||||||||||||  |||    
T  45758664 tcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaattttttaaaagataaatgcaag 45758565  T
Q  457 gtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||| ||||||||||  ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  45758564 gtgttgtatatatgttatacatcc--aaaggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 45758496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 360 - 528
Target Start/End: Complemental strand, 6221844 - 6221678
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    |||||||||||| |||||||||| |||||||||||||||||| ||        |||||| ||||||| | ||||||| ||||||||||||||| || |||    
T  6221844 tcggttctgtaaatgaaaagagacccgtaataaaataaaaatttattttttttaaagaacaatgttctatttaaatt-tttaaaagataaatacaatgtg 6221746  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
      ||||||| ||| ||||||  |||| |||||||||| || |||||| || |||||||||||||||||||    
T  6221745 ccgtatataagcggtacatc--aaaatgtgaaaatcattatcgtatatatgaggaacctcaaaccaccct 6221678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 39134720 - 39134838
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaa-gataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat- 509  Q
    ||||||| ||||||| | ||||||| ||||||| |||||||| |||||| ||||||||||| ||||| ||  |||||||| ||||||||| ||||||||     
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacaccc--aaaggtgataatcactactgtatacatg 39134817  T
Q  510 aggaacctcaaaccaccctcc 530  Q
    |||||||||||||||||||||    
T  39134818 aggaacctcaaaccaccctcc 39134838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 526
Target Start/End: Complemental strand, 5533475 - 5533314
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaa-ttgtttaaaagataaatataaggtgatgt 463  Q
    |||||||||||||||||| |||||||||||||||||||||       ||||||| ||| ||| | ||||| || ||||||||||||| | ||||||  ||    
T  5533475 tctgtaagtgaaaagagacccgtaataaaataaaaatgtatttttttaaaagaacaatattctatttaaatttttttaaaagataaacacaaggtgccgt 5533376  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    |||||||   ||||  |  ||||||||||||||||||||||||||| ||||| |||||||||||    
T  5533375 atatatgatgtacaatc--aaaggtgaaaatcactaccgtatacatgaggaaactcaaaccacc 5533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 9173029 - 9173116
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||||||    
T  9173029 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtatacat 9173116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 9181011 - 9181098
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||||||    
T  9181011 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtatacat 9181098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 430 - 530
Target Start/End: Complemental strand, 26804042 - 26803946
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||| ||| ||  ||||||||||||||||      |||||||||||||||||||||||||| || ||||||||||||||||    
T  26804042 ttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac-----aaggtgaaaatcactaccgtatacatgagaaacctcaaaccaccct 26803948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 38547042 - 38547151
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||| | |||| ||  ||| ||||||||||||| | ||||||| |||||||||    
T  38547042 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacaccc--aaatgtgaaaatcactatcatatacatgaggaacctc 38547139  T
Q  519 aaaccaccctcc 530  Q
    ||||||||||||    
T  38547140 aaaccaccctcc 38547151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 17169063 - 17168976
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| |||||||||||||||||||||| |||||||||||| |||| ||  |||||||||||| |||||| |||||||    
T  17169063 aatgttctatttatattttttaaaagataaatataaggtgttgtatatatgcggtacaccc--aaaggtgaaaatgactaccatatacat 17168976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 27559744 - 27559657
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  27559744 aatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 27559657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 38853637 - 38853527
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacatag 511  Q
    ||||||| | ||||| | ||||||| |||||| |||||||| ||||||  |||||||||   || |||||||  ||||||||||||||||||||||||      
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaa--ggtgaaaatcactaccgtatacatga 38853540  T
Q  512 gaacctcaaacca 524  Q
    |||||||||||||    
T  38853539 gaacctcaaacca 38853527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 430 - 530
Target Start/End: Complemental strand, 33170856 - 33170757
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| |||||||  |||||| || ||| |||||||||||| |||| |  ||| |||||||||||||||||||||||| || ||||| ||||||||||    
T  33170856 ttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacacc--aaatggtgaaaatcactaccgtatacatgagaaaccttaaaccaccct 33170759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 508
Target Start/End: Original strand, 1366884 - 1366970
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca 508  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||| ||||||| |||||||||||||    
T  1366884 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaagatgaaaatgactaccgtataca 1366970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 40501814 - 40501883
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||| ||||| ||||||||||||||    
T  40501814 tttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtaaaaatgactaccgtatacat 40501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 365 - 504
Target Start/End: Complemental strand, 35392431 - 35392295
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgta 464  Q
    |||||||||||||| |  ||| ||||||||||||||| |        ||||||||||||||  | ||||||| |||||  |||||||| ||||||  |||    
T  35392431 tctgtaagtgaaaaaatgtccataataaaataaaaatatttttttttaaaagaataatgttttatttaaattttttaag-gataaatacaaggtgccgta 35392333  T
Q  465 tatatgcgatacatccaaaaaggtgaaaatcactaccgta 504  Q
    |||||||| || |||||||  |||||||||||||||||||    
T  35392332 tatatgcggtatatccaaa--ggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 5316787 - 5316700
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  5316787 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 5316700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 16140170 - 16140075
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | |||||| | ||| ||| ||||||||||||||| |||||| |||||||||||| ||||  |  | |||||||||| ||||||||||||||    
T  16140170 aaaagagtgatgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtaca--cctagaggtgaaaatgactaccgtatacat 16140075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 23185534 - 23185447
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  23185534 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--ataggtgaaaatgactaccgtatacat 23185447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 506
Target Start/End: Complemental strand, 19955806 - 19955740
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtata 506  Q
    |||||||||||||||||||||   ||||||||||| |||| ||  |||||||||||| |||||||||||    
T  19955806 tttaaaagataaatataaggtaccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtata 19955740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 421 - 508
Target Start/End: Complemental strand, 6771897 - 6771812
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca 508  Q
    |||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| |||||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtataca 6771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 528
Target Start/End: Original strand, 10925978 - 10926067
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||| || |||  ||||||||| ||| |||||||| |  |||||||||||||||||||||| |||| ||||||| ||||||    
T  10925978 tttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaaga--tgaaaatcactaccgtatacatgaggatcctcaaatcaccct 10926067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 526
Target Start/End: Original strand, 43235837 - 43235881
Alignment:
Q  483 aaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  43235837 aaaggtgaaaatcactatcgtatacatgaggaacctcaaaccacc 43235881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 518
Target Start/End: Complemental strand, 50881537 - 50881440
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| ||||||   | |||||||||| ||||| |||||||| |||||||||    
T  50881537 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatc--tagaggtgaaaatgactacagtatacatgaggaacctc 50881440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 438 - 508
Target Start/End: Original strand, 21740961 - 21741029
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca 508  Q
    ||||||||||||||| ||||||  |||||||||||||||| ||  | |||||||||| |||||| ||||||    
T  21740961 tttaaaagataaatacaaggtgccgtatatatgcgatacaccc--agaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 4971624 - 4971711
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| |||||   ||||||||||| |||| ||| ||  |||||||| ||||||||||||||    
T  4971624 aatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataa--gtgaaaatgactaccgtatacat 4971711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 44655848 - 44655761
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||| ||||| ||||||||||||||    
T  44655848 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccc--agaggtaaaaatgactaccgtatacat 44655761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 14146406 - 14146320
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | || ||||||| ||||||||||||||    
T  14146406 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agagatgaaaatgactaccgtatacat 14146320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 51607463 - 51607533
Alignment:
Q  438 tttaaaagataaatataaggt-gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||| |  ||||||||||| |||| ||  ||| |||||||| ||||||||||||||    
T  51607463 tttaaaagataaatataaggtggccgtatatatgcggtacaccc--aaacgtgaaaatgactaccgtatacat 51607533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 365 - 525
Target Start/End: Complemental strand, 1506 - 1346
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    ||||||||||||||||  |||||||||||||||||| |||        ||||||||||||||| | ||||| | |||||||||||||||||||||| |||    
T  1506 tctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgt 1407  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccac 525  Q
    |||||||| ||||| ||  ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  1406 atatatgctatacaccc--aaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 365 - 525
Target Start/End: Complemental strand, 15078910 - 15078750
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    ||||||||||||||||  |||||||||||||||||| |||        ||||||||||||||| | ||||| | |||||||||||||||||||||| |||    
T  15078910 tctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatttttaaaagataaatataaggtgctgt 15078811  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccac 525  Q
    |||||||| ||||| ||  ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  15078810 atatatgctatacaccc--aaatgtgaaaatcactatcgtatacatgaggaacctcaaaccac 15078750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 412 - 528
Target Start/End: Original strand, 15167414 - 15167529
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| |||||||||||||||||| ||| ||||||||||||||||| ||  ||| ||||||||||||| ||||||||| |    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacaccc--aaatgtgaaaatcactatcgtatacatga 15167511  T
Q  511 ggaacctcaaaccaccct 528  Q
    ||||||||||||||||||    
T  15167512 ggaacctcaaaccaccct 15167529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 364 - 526
Target Start/End: Original strand, 7944472 - 7944634
Alignment:
Q  364 ttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatg 462  Q
    |||||||| ||||||||| ||||||||||||||||||||||        ||||||| ||||||  | ||||||| ||||||| ||||||| ||||||  |    
T  7944472 ttctgtaattgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccg 7944571  T
Q  463 tatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||||||||   |||| |||||  |||||||||||||||||||||||| |||||||||||||||||    
T  7944572 tatatatgttgtacacccaaa--ggtgaaaatcactaccgtatacatgaggaacctcaaaccacc 7944634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 529
Target Start/End: Original strand, 39332354 - 39332520
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||| |||||||||||  |||||||||||||||| ||         |||||| ||||||| | |||| || || |||||||||||| ||||||    
T  39332354 tcggttctgtaggtgaaaagagactcgtaataaaataaaaaagtttttttt--aaagaacaatgttctatttaattttttaaaaagataaatacaaggtg 39332451  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctc 529  Q
       |||||| ||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  39332452 tcatatataagcggtacatccaaa--ggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctc 39332520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 41677172 - 41677290
Alignment:
Q  412 aaaagaataatgttccacttaaattgttt-aaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat- 509  Q
    ||||||| ||||||| | ||||||| ||| |||||||||||| ||| ||  ||||||||||||||||||   |||||||||||||||||| ||||||||     
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatc--taaaggtgaaaatcactactgtatacatg 41677269  T
Q  510 aggaacctcaaaccaccctcc 530  Q
    |||||||||||||||||||||    
T  41677270 aggaacctcaaaccaccctcc 41677290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 438 - 530
Target Start/End: Complemental strand, 5942774 - 5942683
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||||||||||||| ||| ||  |||||| |||| |||| |||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  5942774 tttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaa--ggtgaaaatcactaccgtatacatgaggaacctcaaaccaccctcc 5942683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 412 - 523
Target Start/End: Complemental strand, 8103016 - 8102906
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    |||| |||||||||  | ||||||| ||||||||||||||| ||||||  ||||||||||| ||||  |  |||||||||||||| |||||||||||| |    
T  8103016 aaaataataatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtaca--cctaaaggtgaaaatcattaccgtatacatga 8102919  T
Q  511 ggaacctcaaacc 523  Q
    |||||||||||||    
T  8102918 ggaacctcaaacc 8102906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 365 - 526
Target Start/End: Original strand, 5973058 - 5973219
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    ||||||| ||||||||| || |||||||||||||||||||        ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||    
T  5973058 tctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgt 5973157  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctcaaaccacc 526  Q
    |||||||   |||| ||  | || ||||||||| |||||||||||  |||||||||||||||||    
T  5973158 atatatgttgtacaccc--atagatgaaaatcattaccgtatacacgaggaacctcaaaccacc 5973219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 23798268 - 23798355
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||||||  |||||||| ||||||||||||||    
T  23798268 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaa--gtgaaaatgactaccgtatacat 23798355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 526
Target Start/End: Complemental strand, 11290288 - 11290175
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||  | ||||||| ||||||||||||||| ||||||  |||||||||   ||||  ||||  |||||||||||||||||||||||| |    
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaa--ggtgaaaatcactaccgtatacatga 11290191  T
Q  511 ggaacctcaaaccacc 526  Q
    | ||||||||||||||    
T  11290190 gcaacctcaaaccacc 11290175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 414 - 528
Target Start/End: Original strand, 25561496 - 25561607
Alignment:
Q  414 aagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-agg 512  Q
    ||||||||||||| | ||||||  |||||| |||||||| ||||||  |||||||||||||| | |||||   |||||||||||| |||||||||| |||    
T  25561496 aagaataatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaat--gtgaaaatcactgccgtatacatgagg 25561591  T
Q  513 aacctcaaaccaccct 528  Q
    ||||||||||||||||    
T  25561592 aacctcaaaccaccct 25561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 530
Target Start/End: Complemental strand, 5721654 - 5721546
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctca 519  Q
    |||||| | |||| || ||||||||||||||| ||||||   ||||||  || |||| ||||||  ||||||||||||||||||||| | ||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaa--gtgaaaatcactaccgtatacctgaggaacctca 5721557  T
Q  520 aaccaccctcc 530  Q
    |||||||||||    
T  5721556 aaccaccctcc 5721546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 23606636 - 23606723
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||| ||||| ||||||||||||||    
T  23606636 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtaaaaatgactaccgtatacat 23606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 360 - 497
Target Start/End: Original strand, 30674349 - 30674485
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||| |||||||||||||||||   |||||||||||||||| |||         |||||| ||||||| | ||||||  |||||||||||||||||||||    
T  30674349 tcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaatgttttaaaagataaatataaggt 30674448  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcac 497  Q
    |  ||||||||||||||||  |  |||||||||||||||    
T  30674449 gtcgtatatatgcgataca--ctcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 41879285 - 41879190
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||| | ||| ||| ||||||||||||||| |||||   ||||||||||| |||||||  |||||||||||| ||||||| ||||||    
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatcc--aaaggtgaaaatgactaccgaatacat 41879190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 10917469 - 10917400
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| |||||| |||||||    
T  10917469 tttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccttatacat 10917400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 509
Target Start/End: Complemental strand, 42600860 - 42600791
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||| | |||| ||  |||||||||||| ||||||||||||||    
T  42600860 tttaaaagataaatataaggtgccgtatatatgtggtacaccc--aaaggtgaaaatgactaccgtatacat 42600791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 509
Target Start/End: Original strand, 34789808 - 34789956
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgta-nnnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||| ||| |||||||||| || ||||||||||||||||||||||        |||||||  |||||| | ||||||   |||||||||||||| ||| |    
T  34789808 tcggctctataagtgaaaaaaggtccgtaataaaataaaaatgtattttttttaaaagaacgatgttctatttaaatctcttaaaagataaatacaagat 34789907  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |  |||||||||   |||| ||  |||||||||||||||||||||||||||    
T  34789908 gtcgtatatatgttgtacaccc--aaaggtgaaaatcactaccgtatacat 34789956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 45475913 - 45475826
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  45475913 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--ataggtgaaaatgactaccgtatacat 45475826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 5942820 - 5942780
Alignment:
Q  364 ttctgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    ||||||||||||||||||  |||||||||||||||||||||    
T  5942820 ttctgtaagtgaaaagaggaccgtaataaaataaaaatgta 5942780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 526
Target Start/End: Original strand, 14509926 - 14510094
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgta----nnnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataa 455  Q
    ||||||||| ||||||||| ||  |||||||||||||||||||||            |||||| ||||||| | ||||||| ||||||||| ||||||||    
T  14509926 tcggttctgcaagtgaaaataggcccgtaataaaataaaaatgtattttttttttttaaagaacaatgttcaatttaaattttttaaaagacaaatataa 14510025  T
Q  456 ggtgatgtatatatgcgatacatccaaaaaggtg-aaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    ||||  |||||||  || |||| ||  ||| ||| |||||||||||||||||||| || ||||||||||||||    
T  14510026 ggtgtcgtatata--cggtacaccc--aaatgtgaaaaatcactaccgtatacatgagtaacctcaaaccacc 14510094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 360 - 403
Target Start/End: Original strand, 34048654 - 34048697
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgt 403  Q
    |||| |||||||||||||| ||| ||||||||||||||||||||    
T  34048654 tcggctctgtaagtgaaaatagacccgtaataaaataaaaatgt 34048697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 460
Target Start/End: Original strand, 34868177 - 34868224
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtga 460  Q
    |||||||||||||| | ||||||| ||||||||||||||| |||||||    
T  34868177 aaagaataatgttctatttaaattttttaaaagataaatacaaggtga 34868224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 5860751 - 5860838
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| |||||| |||||||    
T  5860751 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccatatacat 5860838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 430 - 530
Target Start/End: Original strand, 23941108 - 23941207
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||| ||||||   |||||| |||||||| ||||| |  |||||||||| | | |||| |  |||||||||||||||||||    
T  23941108 ttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaaga--tgaaaatcacaatcatatatacgaggaacctcaaaccaccct 23941205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 30883425 - 30883338
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| || |||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  30883425 aatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 30883338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 365 - 401
Target Start/End: Complemental strand, 4097857 - 4097821
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaat 401  Q
    ||||||| | |||||||||||||||||||||||||||    
T  4097857 tctgtaaataaaaagagatccgtaataaaataaaaat 4097821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 38009097 - 38009137
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    |||||||||||| ||||||||  ||||||||||||||||||    
T  38009097 tcggttctgtaactgaaaagaagtccgtaataaaataaaaa 38009137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 361 - 521
Target Start/End: Original strand, 23020430 - 23020589
Alignment:
Q  361 cggttctgtaagtgaaaagagatccgtaataaaataaaaatgta-nnnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||||||||||||| ||||||||||||||||||||||        ||||||| || ||| || ||| ||| ||||||||||||||||||||||    
T  23020430 cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcatttagattttttaaaagataaatataaggtg 23020529  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaa 521  Q
     |||||||||||   |||  |  ||||||||||||||||||||||||||| |||||| |||||    
T  23020530 ttgtatatatgc---acacactcaaaggtgaaaatcactaccgtatacatgaggaacttcaaa 23020589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 369 - 530
Target Start/End: Original strand, 27237378 - 27237538
Alignment:
Q  369 taagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatat 467  Q
    ||||||||||||||||||||||||||||| || |||        ||||||| ||||||| | ||||||| ||||||||||||||| |||||| |||||||    
T  27237378 taagtgaaaagagatccgtaataaaataacaa-gtattttttttaaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatat 27237476  T
Q  468 atgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||| |||  |||   ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  27237477 atgtgatgaatc--taaaggtgaaaatcactatcgtatacatgaggaacctcaaaccaccctcc 27237538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 365 - 530
Target Start/End: Complemental strand, 23859225 - 23859060
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaa-agaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    |||||||||||||||||| | ||||||||||||||| |||        || |||||||||||| | ||||||| ||||||||||||||| || ||   ||    
T  23859225 tctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctatttaaattttttaaaagataaatacaatgtaccgt 23859126  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    |||||||||||||| ||  |||| ||||||| |||||||||||||| |||| ||||||||||||||||    
T  23859125 atatatgcgatacaccc--aaagatgaaaattactaccgtatacatgaggatcctcaaaccaccctcc 23859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 36891682 - 36891565
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||||||||||| | ||| ||| |||||| ||| |||| || ||| ||||||||| || |||||||  ||||||||||||||||||||||||||| |    
T  36891682 aaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatcc--aaaggtgaaaatcactaccgtatacatga 36891585  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    |||||||||||||| |||||    
T  36891584 ggaacctcaaaccatcctcc 36891565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 430 - 530
Target Start/End: Original strand, 9021816 - 9021914
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacataggaacctcaaaccaccctc 529  Q
    ||||||| ||||||||||||||| || |||  ||||||||||| |||| |||||  ||||||||||||||||||||||||  | ||||||||||||||||    
T  9021816 ttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaa--ggtgaaaatcactaccgtatacatgaggacctcaaaccaccctc 9021913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 412 - 530
Target Start/End: Complemental strand, 7398555 - 7398438
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| ||| ||||||||||| ||||||   |||||||| ||||||  |  ||||||||||||||||||| ||||||| |    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgataca--cctaaaggtgaaaatcactaccatatacatga 7398458  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    ||||||||||||||||||||    
T  7398457 ggaacctcaaaccaccctcc 7398438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 528
Target Start/End: Original strand, 6765680 - 6765794
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtata-catag 511  Q
    |||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||| ||  |||||||  ||||||||||||||||||||||||  | ||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatcc--aaaggtgaaaatcactaccgtatataagag 6765777  T
Q  512 gaacctcaaaccaccct 528  Q
     ||||||||||||||||    
T  6765778 taacctcaaaccaccct 6765794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 360 - 528
Target Start/End: Complemental strand, 12981481 - 12981315
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtg 459  Q
    ||||||||||| ||||||||||   |||||||||||||||||||        ||||||| ||||||| | |||| || ||||||||||||||| |||||     
T  12981481 tcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgt-tttttataaaagaagaatgttctatttaatttttttaaaagataaatacaaggtt 12981383  T
Q  460 atgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
       |||||| ||| ||||  || |||||||||||||||||| ||||| || |||||||||||||||||||    
T  12981382 ccatatatacgcggtaca--cacaaaggtgaaaatcactactgtatatatgaggaacctcaaaccaccct 12981315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 412 - 522
Target Start/End: Original strand, 2611260 - 2611369
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||| ||||  || || |||||||||||| || |||||||| |    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtaca--cacaatggtgaaaatcacaactgtatacatga 2611357  T
Q  511 ggaacctcaaac 522  Q
    ||||||||||||    
T  2611358 ggaacctcaaac 2611369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 23551095 - 23551164
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| ||||||||||||||    
T  23551095 tttaaaagataaatataaggtgtcgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtatacat 23551164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 501
Target Start/End: Original strand, 21763537 - 21763672
Alignment:
Q  363 gttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatg 462  Q
    ||||| ||||| |||||||||||||||||||||||||| |||       ||| ||| | ||||| | ||||||| ||||||||||||||| || ||   |    
T  21763537 gttctataagtaaaaagagatccgtaataaaataaaaacgtatttttttaaa-gaacattgttctatttaaattttttaaaagataaatacaaagtatcg 21763635  T
Q  463 tatatatgcgatacatccaaaaaggtgaaaatcactacc 501  Q
    ||||||||||||||| ||||||| |||||||||||||||    
T  21763636 tatatatgcgataca-ccaaaaa-gtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 20091305 - 20091374
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  20091305 tttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 20091374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 430 - 528
Target Start/End: Complemental strand, 20153287 - 20153190
Alignment:
Q  430 ttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    ||||||| ||||||||||||||| || ||| ||||||||||||||| | ||  |||| ||||||||||| |||||||||| ||| | |||||||||||||    
T  20153287 ttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaaccc--aaagatgaaaatcactgccgtatacatgagggatctcaaaccaccct 20153190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 48983868 - 48983937
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  48983868 tttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaataactaccgtatacat 48983937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 24525691 - 24525778
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  || |||||||| |||| ||||||  |||||||| ||||||||||||||    
T  24525691 aatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaa--gtgaaaatgactaccgtatacat 24525778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 530
Target Start/End: Original strand, 12419447 - 12419610
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnn-aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtat 465  Q
    |||||||||||||||  |||||||||||||| || |||        ||||||| ||||||| | ||||||| ||||||||||||||| || ||    |||    
T  12419447 tgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttat 12419546  T
Q  466 atatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    || || |||||||||  |||| ||||||||||||  | |||||| |||||||||||||||||||||    
T  12419547 atgtgtgatacatcc--aaagatgaaaatcactattgaatacatgaggaacctcaaaccaccctcc 12419610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 38414900 - 38414969
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||| ||||||||| | |||| ||  |||||||||||| ||||| ||||||||    
T  38414900 tttaaaagataaatataaggtgacgtatatatgtggtacaccc--aaaggtgaaaatgactactgtatacat 38414969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 369 - 506
Target Start/End: Complemental strand, 23744944 - 23744808
Alignment:
Q  369 taagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaa-gaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatat 467  Q
    |||||||||||||  |||||| ||||||||||||||       |||| ||| ||||||| | ||||||| ||||||||||||||| ||||||  | ||||    
T  23744944 taagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatat 23744845  T
Q  468 atgcgatacatccaaaaaggtgaaaatcactaccgtata 506  Q
    ||||| ||||  |  |||| | |||||||||||||||||    
T  23744844 atgcggtaca--cctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 29077316 - 29077229
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| ||||  | || |||||||||| ||||||||||||||    
T  29077316 aatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtaca--ccaagaggtgaaaatgactaccgtatacat 29077229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 10955579 - 10955493
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| ||||  |  | |||||||||| ||||||||||||||    
T  10955579 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtaca--ctcagaggtgaaaatgactaccgtatacat 10955493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 38971402 - 38971365
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    |||||||||||||||| |||||||||||||||||||||    
T  38971402 tgtaagtgaaaagagacccgtaataaaataaaaatgta 38971365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 530
Target Start/End: Original strand, 9014829 - 9014877
Alignment:
Q  483 aaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  9014829 aaaggtgaaaatcactaccgtatacatgagtaacctcaaatcaccctcc 9014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 47984994 - 47985063
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||| ||||||||||||  ||||||||||| |||| ||  |||||||||||| || |||||||||||    
T  47984994 tttaaaagaaaaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgaccaccgtatacat 47985063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 8171545 - 8171632
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | || ||||||| ||||||||||||||    
T  8171545 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agagatgaaaatgactaccgtatacat 8171632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 18776772 - 18776859
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | | |||||||| ||||||||||||||    
T  18776772 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agatgtgaaaatgactaccgtatacat 18776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 365 - 399
Target Start/End: Original strand, 26917681 - 26917715
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaa 399  Q
    ||||||||||||||||| |||||||||||||||||    
T  26917681 tctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 257 - 374
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||| |||| ||  ||| ||||||||||||||||||||||| |    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccc--aaatgtgaaaatcactaccgtatacatga 354  T
Q  511 ggaacctcaaaccaccctcc 530  Q
     |||||||||||||||||||    
T  355 tgaacctcaaaccaccctcc 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 230858 - 230975
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | |||||||  ||||||||||||| ||||||| ||||||||||||||| | ||  ||||||||||||||||||| ||||||| |    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatataccc--aaaggtgaaaatcactaccttatacatga 230955  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    ||||| ||||||||||||||    
T  230956 ggaacttcaaaccaccctcc 230975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 420 - 528
Target Start/End: Complemental strand, 39021 - 38914
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||||||| ||||||||||||||| ||||||  ||||||||||||||||  || ||| |||||||||||||||||||| || |||||||||    
T  39021 aatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgataca--cacaaatgtgaaaatcactaccgtatatatgaggaacctc 38924  T
Q  519 aaaccaccct 528  Q
    ||||||||||    
T  38923 aaaccaccct 38914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 364 - 400
Target Start/End: Complemental strand, 39081 - 39045
Alignment:
Q  364 ttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    |||||||||| ||||||| ||||||||||||||||||    
T  39081 ttctgtaagtaaaaagaggtccgtaataaaataaaaa 39045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 365 - 522
Target Start/End: Original strand, 206440 - 206597
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgt 463  Q
    ||||||||||||||||| |  |||||||||||||||||||         |||||| ||||||| | ||||||| | ||||||||||||| ||||||  ||    
T  206440 tctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaagaagaatgttctatttaaattttgtaaaagataaatacaaggtgtcgt 206539  T
Q  464 atatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaac 522  Q
    ||||||||| |||| ||  || |||||||||||||||||||||||| |||||||||||||    
T  206540 atatatgcggtacaccc--aatggtgaaaatcactaccgtatacatgaggaacctcaaac 206597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 530
Target Start/End: Complemental strand, 26279694 - 26279530
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtata 466  Q
    ||||||||||||||| ||| || ||||||||||| |||       ||||||| ||||||| | ||||||| ||||||||||||||| ||||||  |||||    
T  26279694 tgtaagtgaaaagaggtccatagtaaaataaaaacgtatttttttaaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtata 26279595  T
Q  467 tatgcgatacatccaaaaaggtgaaaatcact--accgtatacat-aggaacctcaaaccaccctcc 530  Q
    ||||| ||||| ||  |||| |||||||||||  ||  ||||||| |||||||||||||||||||||    
T  26279594 tatgcaatacaccc--aaagatgaaaatcactacacattatacatgaggaacctcaaaccaccctcc 26279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 516
Target Start/End: Original strand, 54407165 - 54407259
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacataggaacc 516  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||||||  |||||||||||| |||||||||||||||| ||||    
T  54407165 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatcc--aaaggtgaaaatgactaccgtatacatagtaacc 54407259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 363 - 499
Target Start/End: Original strand, 32319106 - 32319239
Alignment:
Q  363 gttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatg 462  Q
    |||||||||||||||| || || |||||||||||||||||||       ||| ||||||||||| | ||||||| ||||||||||||||| || ||| ||    
T  32319106 gttctgtaagtgaaaataggtctgtaataaaataaaaatgtaagtttttaaa-gaataatgttctatttaaattttttaaaagataaatacaaagtgttg 32319204  T
Q  463 tatatatgcgatacatccaaaaaggtgaaaatcacta 499  Q
    |||||||||| |||| ||  |||||||||||| ||||    
T  32319205 tatatatgcggtacaccc--aaaggtgaaaattacta 32319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 43207245 - 43207331
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| ||||||   |||||||||||| ||||||||||||||    
T  43207245 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatc---aaaggtgaaaatgactaccgtatacat 43207331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 412 - 509
Target Start/End: Original strand, 8073337 - 8073432
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| |||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||||||  |||||||| ||||||||||||||    
T  8073337 aaaagagtaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaa--gtgaaaatgactaccgtatacat 8073432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 526
Target Start/End: Complemental strand, 8420433 - 8420320
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-ta 510  Q
    ||||||||||||||| | ||||||| ||||||||||||||| ||||||  |||||||||   |||| ||  ||| |||||||||||| ||||||| |  |    
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacaccc--aaatgtgaaaatcactgccgtatatacga 8420336  T
Q  511 ggaacctcaaaccacc 526  Q
    ||||||||||||||||    
T  8420335 ggaacctcaaaccacc 8420320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 28689368 - 28689477
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||||||| |  |||||||||||| ||||||  |||||||||||||| ||||  |||||||||||||||| |||||||||| || || |||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatcc--aaaggtgaaaatcactgccgtatacatgagaaatctc 28689465  T
Q  519 aaaccaccctcc 530  Q
    |||| |||||||    
T  28689466 aaactaccctcc 28689477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 412 - 530
Target Start/End: Original strand, 54574826 - 54574943
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-a 510  Q
    ||||||| ||||||| | ||||||| || |||| ||||||| |||||   ||||||||||| |||| ||||||  || |||||||||||| ||||||| |    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaa--gtaaaaatcactaccatatacatga 54574923  T
Q  511 ggaacctcaaaccaccctcc 530  Q
    ||||||||||||| ||||||    
T  54574924 ggaacctcaaaccgccctcc 54574943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 34290643 - 34290727
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtata 506  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| |||||||||||    
T  34290643 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtata 34290727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 44708576 - 44708489
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  |||||||| || |||| ||  |||||||||||| ||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacaccc--aaaggtgaaaatgactaccgtatacat 44708489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 53506891 - 53506978
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| |||||||||||||||||||||   ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  53506891 aatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 53506978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 438 - 510
Target Start/End: Original strand, 9878712 - 9878782
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacata 510  Q
    ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| |||| ||||||||||    
T  9878712 tttaaaagataaatataaggtgcagtatatatgcggtacaccc--aaaggtgaaaatgactatcgtatacata 9878782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 509
Target Start/End: Complemental strand, 47467782 - 47467696
Alignment:
Q  421 atgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    |||||| | ||| ||| ||||||||||||||| ||||||  |||||||||||||||| ||  | |||||||||| ||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacaccc--agaggtgaaaatgactaccgtatacat 47467696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 367 - 526
Target Start/End: Complemental strand, 52374810 - 52374650
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgta--nnnnnnnaaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgta 464  Q
    |||||||||||||| ||||||||||||||||||| |||         ||||||| ||||||| | ||||||| |||   | ||||||| || |||  |||    
T  52374810 tgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgta 52374711  T
Q  465 tatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccacc 526  Q
    || ||||||||||||   ||||| ||||||||||||||||||||| | |||||||| ||||||    
T  52374710 tagatgcgatacatc--taaaggagaaaatcactaccgtatacatgaagaacctcataccacc 52374650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 21582878 - 21582783
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||  | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 21582783  T

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Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Complemental strand, 37168466 - 37168379
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||| | || | ||  |||||||||||| ||||||||||||||    
T  37168466 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtataccc--aaaggtgaaaatgactaccgtatacat 37168379  T

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Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 38681100 - 38681187
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  |||| |||||| |||||||  | |||||||||| ||||||||||||||    
T  38681100 aatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatcc--agaggtgaaaatgactaccgtatacat 38681187  T

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Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 509
Target Start/End: Original strand, 54619210 - 54619297
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| ||||||||||||||    
T  54619210 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgactaccgtatacat 54619297  T

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Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 477
Target Start/End: Complemental strand, 42453511 - 42453446
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgataca 477  Q
    ||||||| ||||||| | ||||||| ||||||||||||||| ||||||   |||||||||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgataca 42453446  T

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Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 360 - 530
Target Start/End: Complemental strand, 25855581 - 25855412
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggt 458  Q
    |||||| ||||| |||||| ||  |||||||||||||||||||||         |||||| ||||||| | ||||||| |||||||||||| || |||||    
T  25855581 tcggttatgtaaatgaaaaaaggcccgtaataaaataaaaatgtatgtttttttaaagaacaatgttctatttaaattttttaaaagataa-tacaaggt 25855483  T
Q  459 gatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtataca-taggaacctcaaaccaccctcc 530  Q
    |  |||||||||   | || |||||  | |||||||||||||||||||||  | |||||||||||||||||||    
T  25855482 gtcgtatatatgtagtgcacccaaa--gttgaaaatcactaccgtatacacgaagaacctcaaaccaccctcc 25855412  T

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Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 526
Target Start/End: Complemental strand, 49393242 - 49393085
Alignment:
Q  367 tgtaagtgaaaagagatccgtaataaaataaaaatgtannnnnnna-aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtat 465  Q
    |||||||||||| |||  ||||||||||||||||||||         |||||| |||||||   ||||||| ||||||||||||||| |||| |  ||||    
T  49393242 tgtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtat 49393143  T
Q  466 atatgcgatacatccaaaaaggtgaaaatcactaccgtatacataggaacctcaaaccacc 526  Q
    ||||| | |||| |||||  ||| ||||| ||||||||||||||  |||||||||| ||||    
T  49393142 atatgtg-tacacccaaa--ggtaaaaattactaccgtatacatgagaacctcaaatcacc 49393085  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 509
Target Start/End: Original strand, 3953895 - 3953990
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||| | ||| ||| ||||||||||||||| ||||||  ||||||||||| |||| ||  | |||||||||| |  |||||||||||    
T  3953895 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc--agaggtgaaaatgaaaaccgtatacat 3953990  T

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Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 360 - 400
Target Start/End: Original strand, 23641263 - 23641303
Alignment:
Q  360 tcggttctgtaagtgaaaagagatccgtaataaaataaaaa 400  Q
    ||||||||||| ||||||||||| |||| ||||||||||||    
T  23641263 tcggttctgtaggtgaaaagagacccgtgataaaataaaaa 23641303  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 438 - 509
Target Start/End: Original strand, 50939258 - 50939327
Alignment:
Q  438 tttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||||||||||||||||||  ||||||||  | |||| ||  |||||| ||||| ||||||||||||||    
T  50939258 tttaaaagataaatataaggtgccgtatatatatggtacaccc--aaaggtaaaaatgactaccgtatacat 50939327  T

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Target: scaffold0018 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 420 - 530
Target Start/End: Original strand, 173517 - 173626
Alignment:
Q  420 aatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctc 518  Q
    ||||||| | ||||||| ||||||||||||||| |||||   |||||||||||||||| ||  |||||| |||||||||||||||||| | |||||||||    
T  173517 aatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacaccc--aaaggtaaaaatcactaccgtatacgtgaggaacctc 173614  T
Q  519 aaaccaccctcc 530  Q
    |||||| |||||    
T  173615 aaaccatcctcc 173626  T

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Target: scaffold0182 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 413 - 530
Target Start/End: Original strand, 23993 - 24109
Alignment:
Q  413 aaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-ag 511  Q
    |||||| ||| ||| | ||||||| ||||||||||||||| ||||||  ||||||||||| |||| ||||||  |||||||||| |||||||| ||| ||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaa--gtgaaaatcattaccgtatgcataag 24090  T
Q  512 gaacctcaaaccaccctcc 530  Q
    ||| |||||||||||||||    
T  24091 gaatctcaaaccaccctcc 24109  T

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Target: scaffold0039 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 412 - 509
Target Start/End: Complemental strand, 106642 - 106547
Alignment:
Q  412 aaaagaataatgttccacttaaattgtttaaaagataaatataaggtgatgtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat 509  Q
    ||||||| ||||||| | ||| ||| ||||||||||||||||||||||  ||||||||||| |||| ||  |||||||||||| ||||||||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacaccc--aaaggtgaaaatgactaccgtatacat 106547  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 16081 - 16016
Alignment:
Q  462 gtatatatgcgatacatccaaaaaggtgaaaatcactaccgtatacat-aggaacctcaaaccaccct 528  Q
    |||| |||||| |||||||||| |  |||||||||||||||||||||| || ||||||||||||||||    
T  16081 gtatgtatgcggtacatccaaaga--tgaaaatcactaccgtatacatgagaaacctcaaaccaccct 16016  T

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Target: scaffold0022 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 40240 - 40201
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  40240 tctgtaagtgaaaagaggttcgtaataaaataaaaatgta 40201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 404
Target Start/End: Complemental strand, 138300 - 138261
Alignment:
Q  365 tctgtaagtgaaaagagatccgtaataaaataaaaatgta 404  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  138300 tctgtaagtgaaaagaggttcgtaataaaataaaaatgta 138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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