View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4978-Insertion-12 (Length: 301)

Name: NF4978-Insertion-12
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4978-Insertion-12
NF4978-Insertion-12
[»] chr6 (19 HSPs)
chr6 (7-262)||(25005456-25005717)
chr6 (205-281)||(31203921-31203997)
chr6 (213-277)||(17353218-17353282)
chr6 (205-281)||(31861955-31862031)
chr6 (205-278)||(10266843-10266916)
chr6 (158-264)||(20715963-20716069)
chr6 (216-280)||(3103683-3103747)
chr6 (205-281)||(7451602-7451678)
chr6 (217-277)||(10460226-10460286)
chr6 (153-189)||(17264151-17264187)
chr6 (213-281)||(26252840-26252908)
chr6 (230-281)||(11646647-11646698)
chr6 (205-278)||(14965344-14965416)
chr6 (156-197)||(20469701-20469742)
chr6 (216-277)||(28711884-28711945)
chr6 (205-261)||(6875009-6875065)
chr6 (205-277)||(10343284-10343351)
chr6 (205-277)||(34209944-34210016)
chr6 (205-281)||(34638111-34638187)
[»] chr3 (27 HSPs)
chr3 (213-301)||(45885891-45885979)
chr3 (205-286)||(2513264-2513345)
chr3 (205-279)||(35379973-35380047)
chr3 (153-277)||(18388614-18388739)
chr3 (205-281)||(22152368-22152444)
chr3 (153-277)||(17476480-17476604)
chr3 (205-280)||(39903810-39903885)
chr3 (213-286)||(22130586-22130659)
chr3 (216-281)||(25842451-25842516)
chr3 (205-278)||(27398294-27398367)
chr3 (205-277)||(3890673-3890745)
chr3 (205-281)||(5492882-5492958)
chr3 (205-277)||(9861856-9861928)
chr3 (205-277)||(21078755-21078827)
chr3 (153-281)||(21790323-21790452)
chr3 (205-279)||(8757358-8757432)
chr3 (153-191)||(12673521-12673559)
chr3 (216-278)||(12712079-12712140)
chr3 (207-281)||(33091543-33091617)
chr3 (215-281)||(53162124-53162190)
chr3 (205-278)||(8149426-8149499)
chr3 (205-269)||(611932-611996)
chr3 (205-277)||(3889852-3889924)
chr3 (213-281)||(4615430-4615498)
chr3 (208-280)||(18540451-18540523)
chr3 (213-286)||(18956511-18956588)
chr3 (214-278)||(50098479-50098543)
[»] chr8 (30 HSPs)
chr8 (205-286)||(12542541-12542622)
chr8 (205-286)||(11929516-11929597)
chr8 (206-269)||(11941671-11941734)
chr8 (205-282)||(5824646-5824723)
chr8 (159-281)||(30264058-30264180)
chr8 (205-281)||(5626031-5626107)
chr8 (173-282)||(8521387-8521496)
chr8 (156-281)||(4430046-4430170)
chr8 (208-282)||(41666636-41666710)
chr8 (175-281)||(5182497-5182603)
chr8 (216-277)||(24852585-24852646)
chr8 (205-281)||(2691923-2691999)
chr8 (205-281)||(15044167-15044243)
chr8 (205-281)||(15898876-15898952)
chr8 (205-281)||(28205543-28205619)
chr8 (205-281)||(30800485-30800561)
chr8 (205-281)||(45440767-45440843)
chr8 (216-282)||(8511964-8512030)
chr8 (216-282)||(8514004-8514070)
chr8 (216-282)||(8517775-8517841)
chr8 (208-278)||(13369189-13369259)
chr8 (207-281)||(27837667-27837741)
chr8 (208-281)||(38283770-38283844)
chr8 (208-277)||(24023182-24023251)
chr8 (205-269)||(3825319-3825383)
chr8 (205-281)||(9503092-9503167)
chr8 (205-281)||(13575402-13575478)
chr8 (205-269)||(18994626-18994690)
chr8 (153-197)||(38804490-38804534)
chr8 (205-281)||(45356350-45356426)
[»] chr5 (23 HSPs)
chr5 (173-301)||(33168366-33168494)
chr5 (206-274)||(5026320-5026388)
chr5 (153-281)||(19018748-19018876)
chr5 (205-278)||(831801-831874)
chr5 (205-281)||(7938008-7938085)
chr5 (205-281)||(4326227-4326303)
chr5 (216-268)||(23270786-23270838)
chr5 (208-277)||(2530356-2530425)
chr5 (205-277)||(17210782-17210854)
chr5 (153-250)||(19929585-19929682)
chr5 (213-281)||(28868209-28868277)
chr5 (205-277)||(42027527-42027599)
chr5 (205-251)||(10721600-10721646)
chr5 (216-278)||(18527040-18527102)
chr5 (208-281)||(33697202-33697275)
chr5 (206-278)||(1283663-1283734)
chr5 (205-281)||(3295716-3295792)
chr5 (205-281)||(16313087-16313163)
chr5 (153-189)||(19930465-19930501)
chr5 (205-277)||(27905097-27905169)
chr5 (205-281)||(42097601-42097677)
chr5 (205-281)||(42506596-42506672)
chr5 (205-281)||(43551026-43551102)
[»] chr4 (25 HSPs)
chr4 (205-281)||(26878502-26878578)
chr4 (153-277)||(35447502-35447626)
chr4 (208-281)||(894034-894107)
chr4 (205-282)||(12214451-12214528)
chr4 (205-281)||(23091197-23091273)
chr4 (205-277)||(47045049-47045121)
chr4 (138-191)||(21796495-21796549)
chr4 (205-278)||(26088835-26088908)
chr4 (213-282)||(55232517-55232586)
chr4 (208-281)||(56084985-56085058)
chr4 (205-277)||(7712711-7712783)
chr4 (205-277)||(13781591-13781663)
chr4 (205-277)||(15849666-15849738)
chr4 (205-281)||(35034695-35034771)
chr4 (205-280)||(17688147-17688222)
chr4 (153-191)||(669834-669872)
chr4 (208-286)||(1397287-1397365)
chr4 (243-281)||(56556070-56556108)
chr4 (205-278)||(5049125-5049198)
chr4 (208-281)||(21122334-21122407)
chr4 (213-278)||(38374693-38374758)
chr4 (208-276)||(2186431-2186499)
chr4 (205-277)||(21053986-21054057)
chr4 (205-281)||(39670270-39670345)
chr4 (205-249)||(46342953-46342997)
[»] chr7 (26 HSPs)
chr7 (205-286)||(19008291-19008372)
chr7 (205-275)||(31015404-31015474)
chr7 (216-281)||(35213838-35213903)
chr7 (205-286)||(41383821-41383902)
chr7 (205-281)||(4998303-4998379)
chr7 (205-277)||(48103566-48103638)
chr7 (240-286)||(789117-789163)
chr7 (216-282)||(21993109-21993175)
chr7 (208-277)||(16169807-16169876)
chr7 (205-281)||(581932-582008)
chr7 (205-277)||(7628984-7629056)
chr7 (205-281)||(8790913-8790989)
chr7 (205-277)||(9334818-9334890)
chr7 (153-234)||(15646964-15647045)
chr7 (213-284)||(27509750-27509821)
chr7 (153-191)||(11485511-11485549)
chr7 (219-281)||(39465942-39466004)
chr7 (208-268)||(1748540-1748600)
chr7 (205-281)||(15971140-15971216)
chr7 (205-281)||(19397158-19397234)
chr7 (205-269)||(21081563-21081627)
chr7 (213-269)||(23896784-23896840)
chr7 (206-278)||(35446508-35446580)
chr7 (205-277)||(38174984-38175056)
chr7 (205-281)||(46759496-46759572)
chr7 (205-269)||(47901856-47901920)
[»] scaffold0092 (1 HSPs)
scaffold0092 (213-301)||(23992-24080)
[»] chr1 (28 HSPs)
chr1 (205-281)||(7491180-7491256)
chr1 (205-281)||(8574127-8574203)
chr1 (157-279)||(20906880-20907002)
chr1 (205-277)||(35547056-35547128)
chr1 (205-281)||(36604608-36604684)
chr1 (205-281)||(39728335-39728411)
chr1 (205-281)||(44667845-44667921)
chr1 (205-277)||(50884529-50884601)
chr1 (157-281)||(5965583-5965707)
chr1 (205-282)||(924990-925067)
chr1 (205-281)||(11345050-11345124)
chr1 (208-277)||(33475128-33475197)
chr1 (153-189)||(4242269-4242305)
chr1 (172-277)||(10844102-10844207)
chr1 (205-269)||(31526406-31526470)
chr1 (153-277)||(31528734-31528859)
chr1 (156-281)||(43723712-43723837)
chr1 (171-282)||(5935661-5935773)
chr1 (153-191)||(34011047-34011085)
chr1 (205-279)||(43577374-43577448)
chr1 (153-191)||(49162921-49162959)
chr1 (153-251)||(1569912-1570010)
chr1 (216-269)||(14594540-14594593)
chr1 (205-281)||(7548572-7548648)
chr1 (205-277)||(12780342-12780414)
chr1 (205-281)||(17875394-17875469)
chr1 (205-269)||(33194015-33194079)
chr1 (205-281)||(34969230-34969306)
[»] chr2 (24 HSPs)
chr2 (216-278)||(27590912-27590974)
chr2 (205-281)||(33133889-33133965)
chr2 (205-281)||(43709411-43709487)
chr2 (153-276)||(15265687-15265810)
chr2 (216-282)||(32689947-32690013)
chr2 (216-282)||(36080338-36080404)
chr2 (205-278)||(31593390-31593463)
chr2 (205-274)||(34063344-34063413)
chr2 (205-277)||(360452-360524)
chr2 (205-277)||(16039462-16039534)
chr2 (205-281)||(24004979-24005055)
chr2 (205-281)||(24791782-24791858)
chr2 (216-279)||(27530464-27530527)
chr2 (208-281)||(7536613-7536684)
chr2 (205-279)||(17372520-17372594)
chr2 (208-281)||(30976886-30976959)
chr2 (205-278)||(33133556-33133629)
chr2 (208-281)||(41122781-41122854)
chr2 (205-277)||(19039939-19040011)
chr2 (216-268)||(22881477-22881529)
chr2 (205-281)||(25915102-25915178)
chr2 (205-269)||(34576292-34576356)
chr2 (205-277)||(38147737-38147809)
chr2 (213-277)||(38692702-38692766)
[»] scaffold0445 (1 HSPs)
scaffold0445 (205-277)||(4945-5017)
[»] scaffold0128 (1 HSPs)
scaffold0128 (205-277)||(43015-43087)
[»] scaffold0649 (1 HSPs)
scaffold0649 (153-197)||(8261-8305)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 4e-78; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 25005717 - 25005456
Alignment:
Q  7 accattcacttaacacaattcacttttctcgttcaatgacataacgtgttaatccttcaatttcatatgcaactaagacattaactatatcctaggtgta 106  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25005717 accattcacttaacacaattcactt--ctcgtttaatgacataacgtgttaatccttcaatttcatatgcaactaagacattaactatatcctaggtgt- 25005621  T
Q  107 catttaccttatctatttcatcaaatcactt--------gaaaagacgagcacgttccgctctttttattatactaacgtttgaaaattatgaccgat-g 197  Q
     ||||||||||| ||||||||||||||||||        ||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |      
T  25005620 gatttaccttatatatttcatcaaatcacttcaacaagcgaaaagacgagcacgttccgctctttttattataccaacgtttgaaaattataatcggtat 25005521  T
Q  198 nnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattat 262  Q
           |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25005520 tttttttatgaaacattgattttgattataagtaaaaatattaatgtttgttgcagtcaaattat 25005456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 31203921 - 31203997
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  31203921 atgaaattttgattttgattaaaattaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccat 31203997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 17353282 - 17353218
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||||||||| || ||||||||| ||||||||||||  |||| ||||||||||| |||||||    
T  17353282 ttgattttgattaaaactaaaattataaatgtttgttgctttcaagttataacaaacaaaactaa 17353218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 31862031 - 31861955
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| |||||||||| |||| |||||||    
T  31862031 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaattaaattaaccat 31861955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 10266843 - 10266916
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| |||||||||| || ||||| |  ||| |||||||||| |  |||||||||||||||||||||||||    
T  10266843 atgaaattttgattttgactaaaagtatatatataaatgtttgttactttcaaattataacaaactaaactaac 10266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 20716069 - 20715963
Alignment:
Q  158 ctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaa 257  Q
    ||||||| |||  |||||||| |||||||||||| |||||       ||||||| ||||||||||||| || ||||| ||| ||||||||||||  ||||    
T  20716069 ctcttttgattgcactaacgtctgaaaattatgaacgatgtttttttatgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaa 20715970  T
Q  258 attataa 264  Q
     ||||||    
T  20715969 gttataa 20715963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 3103683 - 3103747
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacca 280  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||||||||||    
T  3103683 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaacca 3103747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 7451602 - 7451678
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||||   ||||  ||||||||| ||||||||||||    
T  7451602 atgaaattttgattttgattaaaactaaaactataaatgtttgttgttttcaagatataacaaattaaactaaccat 7451678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 217 - 277
Target Start/End: Complemental strand, 10460286 - 10460226
Alignment:
Q  217 ttttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||||| || ||||||||| ||||||||||||  |||| ||||||||||| |||||||    
T  10460286 ttttgattaaaactaaaattataaatgtttgttgctttcaagttataacaaaccaaactaa 10460226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 17264187 - 17264151
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattat 189  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17264187 ttccgctctttttattacactaacgtttgaaaattat 17264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 26252840 - 26252908
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||  |||||||||||    
T  26252840 ttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaaccat 26252908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 230 - 281
Target Start/End: Complemental strand, 11646698 - 11646647
Alignment:
Q  230 taaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||| ||| ||||||||||||  |||||||||||||||||||| |||||||    
T  11646698 taaaaatataaatgtttgttgctttcaaattataacaaactaaattaaccat 11646647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 14965416 - 14965344
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| || |||||| || ||||||||||||  |||| ||||||||||  ||||||||    
T  14965416 atgaaatcttgattttgattaaaactaaaat-ataaatgtttgttgctttcaagttataacaaatcaaactaac 14965344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 20469701 - 20469742
Alignment:
Q  156 cgctctttttattatactaacgtttgaaaattatgaccgatg 197  Q
    |||||||||||||| | ||||||||||||||||||| |||||    
T  20469701 cgctctttttattacattaacgtttgaaaattatgaacgatg 20469742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 28711884 - 28711945
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||||||||| || ||||| ||||||| ||| ||||  |||| |||||||||||||||||||    
T  28711884 attttgattaaaactaaaaatattaatatttattgctttcaagttataacaaactaaactaa 28711945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 6875009 - 6875065
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaatta 261  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  ||||||||    
T  6875009 atgaaattttgattttgattaaaattaaaaatataaatgtttgttgctttcaaatta 6875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 10343284 - 10343351
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||| ||     |||||||||||||||||||    
T  10343284 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgtag-----ttataacaaactaaactaa 10343351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 34209944 - 34210016
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  || |  |||||||||| |||||||    
T  34209944 atgaaattttgattttgattaaaattaaaaatatgaatgtttgttgctttcgacctataacaaaccaaactaa 34210016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 34638187 - 34638111
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| |||||||| | | ||| ||| |||   |||||||||||||||  |||||||||||    
T  34638187 atgaaattttgattttgattaaaagtaaaaatttaaatattttttgttttcaaattataacaaatcaaactaaccat 34638111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 45885979 - 45885891
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatatttaatttgtctatttcaa 301  Q
    ||||||||||||| |||||||| ||| ||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||    
T  45885979 ttgattttgattaaaagtaaaaatataaatgtttgttgcatttaaattataacaaactaaactaaccatgtttaatttatctatttcaa 45885891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 2513264 - 2513345
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||| |||||||| |||| |||||||||| | ||||||||||||  |||||||||||||||||||| ||||||| ||||    
T  2513264 atgaaattttgatttttattaaaagtaaaattttaaatgtttgttgctttcaaattataacaaactaaattaaccatgttta 2513345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 35380047 - 35379973
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacc 279  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||||    
T  35380047 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaacc 35379973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 18388614 - 18388739
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnn-atgaaatattgattttgattataagtaaaattattaatgtttgttgc 251  Q
    ||||||||||||||||   |||||||||||||||||| | |||||        |||||||  |||||||||||| || ||||| ||| ||||||||||||    
T  18388614 ttccgctctttttattgccctaacgtttgaaaattataaacgatgttttttttatgaaattgtgattttgattaaaactaaaaatataaatgtttgttgc 18388713  T
Q  252 agtcaaattataacaaactaaactaa 277  Q
      |||| ||||||||||| |||||||    
T  18388714 tttcaagttataacaaaccaaactaa 18388739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 22152444 - 22152368
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| || ||||| ||| |||||||||| |  |||||||||||||||||||| |||||||    
T  22152444 atgaaattttaattttgattaaaaataaaaatataaatgtttgttactttcaaattataacaaactaaattaaccat 22152368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 17476604 - 17476480
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgca 252  Q
    ||||||||||||||||  | | ||||||||||||||| | || ||       || |||| ||||| ||||||| || ||||| ||| ||||||||||||     
T  17476604 ttccgctctttttattgcattgacgtttgaaaattatcaacggtgtttttttataaaattttgatgttgattaaaactaaaaatataaatgtttgttgct 17476505  T
Q  253 gtcaaattataacaaactaaactaa 277  Q
     |||||||||||||||| |||||||    
T  17476504 ttcaaattataacaaaccaaactaa 17476480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 39903810 - 39903885
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacca 280  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||||   | || ||||||||||||||||||||||    
T  39903810 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgtttttaagttataacaaactaaactaacca 39903885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 286
Target Start/End: Original strand, 22130586 - 22130659
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    |||||||| |||| ||||||||  || ||| ||| ||||| |||||||||||||||||||| ||||||| ||||    
T  22130586 ttgatttttattaaaagtaaaaagataaatatttattgcattcaaattataacaaactaaattaaccatgttta 22130659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 281
Target Start/End: Complemental strand, 25842516 - 25842451
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  25842516 attttgattaaaattaaaaatataaatgtttgttgctttcaagttataacaaacgaaactaaccat 25842451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 27398367 - 27398294
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| || ||| | ||| ||| ||||||||  |||||||||||||||| ||||||||    
T  27398367 atgaaattttgattttgattaaaactaataatataaatttttgttgctttcaaattataacaaaccaaactaac 27398294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 3890745 - 3890673
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||    
T  3890745 atgaaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 3890673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 5492882 - 5492958
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  | |||||||||||||  |||||||||||    
T  5492882 atgaaattttaattttgattaaaagtaaaaatataaatgttttttgcttttaaattataacaaatcaaactaaccat 5492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 9861928 - 9861856
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| |||||||||||   |||| |||||||||||||||||||    
T  9861928 atgaaattttgatttggattaaaactaaaaatataaatgtttgttgttttcaagttataacaaactaaactaa 9861856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 21078827 - 21078755
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| |||||| |||||  |||| ||||||||||| |||||||    
T  21078827 atgaaattttgattttgattaaaactaaaaatataaatgttggttgctttcaagttataacaaaccaaactaa 21078755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 281
Target Start/End: Original strand, 21790323 - 21790452
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatg-nnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgc 251  Q
    ||||||||||||||||  ||||||||||||||||||||| || ||        ||||||| |||||||| |||| || ||||| ||| ||||||||||||    
T  21790323 ttccgctctttttattgcactaacgtttgaaaattatgagcggtgtttttttgatgaaattttgattttaattaaaactaaaaatataaatgtttgttgc 21790422  T
Q  252 agtcaaattataacaaactaaactaaccat 281  Q
      ||||  |||||||||  | |||||||||    
T  21790423 tttcaaggtataacaaatcatactaaccat 21790452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 8757358 - 8757432
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacc 279  Q
    ||||||| || |||||||||| ||||| || ||| |||| ||||||  ||||||||||||||||  |||||||||    
T  8757358 atgaaattttaattttgattaaaagtataaatataaatgattgttgttgtcaaattataacaaatcaaactaacc 8757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 12673559 - 12673521
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatga 191  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  12673559 ttccgctttttttattatattaacgtttgaaaattatga 12673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 12712140 - 12712079
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||||||| |||||||| ||| ||||||||| ||| |||||| | ||||||||||||||||    
T  12712140 attttgattaaaagtaaaaatataaatgtttgt-gcattcaaataaaaacaaactaaactaac 12712079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 33091617 - 33091543
Alignment:
Q  207 gaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||| || |||||||||| || ||||| ||||||| ||||||||  |||| | ||||||||| |||||||||||    
T  33091617 gaaattttaattttgattaaaactaaaaatattaatttttgttgctttcaagtaataacaaaccaaactaaccat 33091543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 281
Target Start/End: Original strand, 53162124 - 53162190
Alignment:
Q  215 gattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||||| |||| || ||||| ||| ||||||||||||  | || |||||||||||||||||||||||    
T  53162124 gattttaattaaaactaaaaatataaatgtttgttgcttttaagttataacaaactaaactaaccat 53162190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 8149426 - 8149499
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||||   |||| ||||||||| | ||||||||    
T  8149426 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaatccaaactaac 8149499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 611996 - 611932
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| |||||||||||    
T  611996 atgaaattttgatttagattaaaactaaaaatataaatgtttgttgctttcaagttataacaaac 611932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 3889852 - 3889924
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  | || ||||||||||| |||||||    
T  3889852 atgaaattttgatttggattaaaactaaaaatataaatgtttgttgcttttaagttataacaaaccaaactaa 3889924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 4615430 - 4615498
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||||||||| || ||||| ||| |||||||||||   |||| |||||| |||| |||||||||||    
T  4615430 ttgattttgattaaaactaaaaatataaatgtttgttgttatcaagttataaaaaaccaaactaaccat 4615498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 18540451 - 18540523
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacca 280  Q
    |||| ||||||||||||| || ||||| ||| |||| |||||||  |||| ||||||||||  ||||||||||    
T  18540451 aaattttgattttgattaaaactaaaaatataaatgcttgttgctttcaagttataacaaatcaaactaacca 18540523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 18956588 - 18956511
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaat----tataacaaactaaactaaccatattta 286  Q
    ||||||||||||| |||||||| ||| ||| ||| ||||| ||||||    |||||||||||||| ||||||| ||||    
T  18956588 ttgattttgattaaaagtaaaaatataaatatttattgcattcaaattatatataacaaactaaattaaccatgttta 18956511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 50098479 - 50098543
Alignment:
Q  214 tgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||||||||| ||||| |||||| |||| ||||| |  |||||||||| ||||| ||||||||    
T  50098479 tgattttgattaaaagtataattataaatgattgttactttcaaattataccaaaccaaactaac 50098543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 12542541 - 12542622
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||| ||||||||||||| |||||||| ||| |||| |||||||| |||||||||||||||||||||||||||| ||||    
T  12542541 atgaaatcttgattttgattaaaagtaaaaatataaatgcttgttgcattcaaattataacaaactaaactaaccattttta 12542622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 11929516 - 11929597
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||| ||||||||||| | |||||||| ||| ||||||||||||| |||||||||||||||| ||| ||||||| ||||    
T  11929516 atgaaattttgattttgatgaaaagtaaaaatataaatgtttgttgcattcaaattataacaaaccaaaataaccatgttta 11929597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 11941734 - 11941671
Alignment:
Q  206 tgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    |||||| ||||||||||| | |||||||| ||| ||||||||||||| ||||||||||||||||    
T  11941734 tgaaattttgattttgatgaaaagtaaaaatataaatgtttgttgcattcaaattataacaaac 11941671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 5824646 - 5824723
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    ||||||| || ||||||||||||| ||||| ||| ||||||| |||   ||||||||||||||| |||||||||||||    
T  5824646 atgaaattttaattttgattataaataaaaatataaatgttttttgttttcaaattataacaaattaaactaaccata 5824723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Original strand, 30264058 - 30264180
Alignment:
Q  159 tctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaa 258  Q
    ||||||||||  || |||||||||||||||||| ||| |       ||||||| ||||||||||||| || ||||| ||| |||||||||| |  ||||     
T  30264058 tctttttattgcaccaacgtttgaaaattatgaacgacgtttttttatgaaattttgattttgattaaaactaaaaatataaatgtttgttactttcaag 30264157  T
Q  259 ttataacaaactaaactaaccat 281  Q
    ||||||||||  |||||||||||    
T  30264158 ttataacaaatcaaactaaccat 30264180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 5626031 - 5626107
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||  |||| ||||||||||  ||| |||||||    
T  5626031 atgaaattttgattttgattaaaactaaaaatattaatgtttgttgctttcaagttataacaaatcaaattaaccat 5626107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 282
Target Start/End: Original strand, 8521387 - 8521496
Alignment:
Q  173 taacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaa 272  Q
    ||||||||||||||||||| | |||       |||||||  | |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||    
T  8521387 taacgtttgaaaattatgaacaatgtttttttatgaaattgtaattttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatgaa 8521486  T
Q  273 actaaccata 282  Q
    ||||||||||    
T  8521487 actaaccata 8521496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 4430046 - 4430170
Alignment:
Q  156 cgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtc 255  Q
    ||||||||||||| | |||||||||||||||||||| || ||       || |||| ||||||| ||||| || ||||| ||| ||||||||||||  ||    
T  4430046 cgctctttttattgtgctaacgtttgaaaattatgaacggtgtttttt-ataaaattttgatttagattaaaactaaaaatataaatgtttgttgctttc 4430144  T
Q  256 aaattataacaaactaaactaaccat 281  Q
    || ||||||||||  |||||||||||    
T  4430145 aagttataacaaatcaaactaaccat 4430170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Original strand, 41666636 - 41666710
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||| ||||||||||||| || ||||| ||| ||||||||||||  | |||||||||||||| ||| ||||||||    
T  41666636 aaattttgattttgattaaaactaaaaatataaatgtttgttgctttaaaattataacaaaccaaaataaccata 41666710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 281
Target Start/End: Original strand, 5182497 - 5182603
Alignment:
Q  175 acgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaac 274  Q
    ||||||||||||||||| || ||       ||||||| || ||||||| || |||||||| |||||| |||| |||   ||||||||||||||| |||||    
T  5182497 acgtttgaaaattatgaacggtgtttttttatgaaattttaattttgactaaaagtaaaaatattaaagttttttgttttcaaattataacaaattaaac 5182596  T
Q  275 taaccat 281  Q
    |||||||    
T  5182597 taaccat 5182603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 24852646 - 24852585
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||||||||| || ||||| ||| ||||||||||||  |||||||||||||| |||||||||    
T  24852646 attttgattaaaactaaaaatataaatgtttgttgctttcaaattataacaatctaaactaa 24852585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 2691923 - 2691999
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||| ||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||| ||||||    
T  2691923 atgaaattttgcttttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaacgaaccat 2691999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 15044167 - 15044243
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| |||||||||| || || ||||| ||| |||||||||| |  || ||||||||||||| |||||||||||    
T  15044167 atgaaattttgattttgagtaaaactaaaaatataaatgtttgtttctttccaattataacaaaccaaactaaccat 15044243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 15898952 - 15898876
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||| ||||||||  | || ||||||||||| |||||||||||    
T  15898952 atgaaattttgattttgattaaaattaaaaatataaatatttgttgcttttaatttataacaaaccaaactaaccat 15898876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 28205619 - 28205543
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| |||  |||||||||||  |||| ||||||||||| ||| |||||||    
T  28205619 atgaaattttgattttgattaaaactaaaaatatagatgtttgttgctttcaagttataacaaaccaaattaaccat 28205543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 30800485 - 30800561
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  || | ||||||||||  |||||||||||    
T  30800485 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcgagttataacaaatcaaactaaccat 30800561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 45440843 - 45440767
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||||| | |||||||||||   |||| ||||||||||  |||||||||||    
T  45440843 atgaaattttgattttgattaaaattaaaattttaaatgtttgttgttttcaagttataacaaatcaaactaaccat 45440767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 8511964 - 8512030
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||| ||||||||    
T  8511964 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccata 8512030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 8514004 - 8514070
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||| ||||||||    
T  8514004 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccata 8514070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 8517775 - 8517841
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||| ||||||||    
T  8517775 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaagtaaccata 8517841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 278
Target Start/End: Original strand, 13369189 - 13369259
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||| ||||||||||||| || |||||  || ||||||| ||||  |||||||||||||||| ||||||||    
T  13369189 aaattttgattttgattaaaactaaaaaaataaatgtttattgctttcaaattataacaaaccaaactaac 13369259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 207 - 281
Target Start/End: Complemental strand, 27837741 - 27837667
Alignment:
Q  207 gaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||| |||||||||| || |||||||| ||| ||| ||| ||||  ||||||||||| ||| ||||||||||||    
T  27837741 gaaattttgattttgaataaaagtaaaaatataaatattttttgctttcaaattataagaaattaaactaaccat 27837667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 38283844 - 38283770
Alignment:
Q  208 aaatattgattttgattataagtaaaat-tattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || |||||  ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  38283844 aaattttgattttgattaaaactaaaaaatataaatgtttgttgctttcaagttataacaaacaaaactaaccat 38283770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 277
Target Start/End: Original strand, 24023182 - 24023251
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||    
T  24023182 aaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 24023251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 3825383 - 3825319
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || ||||| ||| ||| ||||||||  |||| |||||||||||    
T  3825383 atgaaattttgattttgattaaaactaaaaatataaatatttgttgctttcaagttataacaaac 3825319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 9503167 - 9503092
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||| | || ||||| ||| ||| ||||||||  |||||||||||||||| ||| |||||||    
T  9503167 atgaaattttgattttgataa-aattaaaaatataaatatttgttgctttcaaattataacaaaccaaattaaccat 9503092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 13575402 - 13575478
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  |||| |||||| |||  |||||||||||    
T  13575402 atgaaattttaattttgattaaaagtaaaaatataaatgttttttgctttcaagttataataaatcaaactaaccat 13575478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 18994626 - 18994690
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || ||||| ||| ||||| ||||||  |||| |||||||||||    
T  18994626 atgaaattttgattttgattaaaattaaaaatataaatgtatgttgctttcaagttataacaaac 18994690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 38804490 - 38804534
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatg 197  Q
    ||||||||||||||||   |||||||||||||||||||| |||||    
T  38804490 ttccgctctttttattgcgctaacgtttgaaaattatgagcgatg 38804534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 45356350 - 45356426
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| |||||||| ||| |||  || |||   |||||||||||||||  |||||||||||    
T  45356350 atgaaattttgattttgattaaaagtaaaaatataaatactttttgttttcaaattataacaaatcaaactaaccat 45356426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 301
Target Start/End: Complemental strand, 33168494 - 33168366
Alignment:
Q  173 taacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaa 272  Q
    ||||||||||||||||||| || ||       ||||||  ||||||||||| | | |||||| ||| ||| ||||||||| |||||||||||||||||||    
T  33168494 taacgtttgaaaattatgaacggtgtttttttatgaaactttgattttgatcaaacgtaaaaatataaatatttgttgcattcaaattataacaaactaa 33168395  T
Q  273 actaaccatatttaatttgtctatttcaa 301  Q
    |||||||||  ||||||| ||||||||||    
T  33168394 actaaccatgattaatttatctatttcaa 33168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 274
Target Start/End: Complemental strand, 5026388 - 5026320
Alignment:
Q  206 tgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaac 274  Q
    |||||| ||||||||||||| || ||||| ||| ||||||||||||| |||||||||||||||| ||||    
T  5026388 tgaaattttgattttgattaaaactaaaaatataaatgtttgttgcattcaaattataacaaaccaaac 5026320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 281
Target Start/End: Complemental strand, 19018876 - 19018748
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgca 252  Q
    ||||||||||||||||   |||| ||||||||||||| |  ||||       ||||| | ||||||||||||| || ||||| ||| ||||||||||||     
T  19018876 ttccgctctttttattgctctaatgtttgaaaattataaaagatgtttttttatgaagttttgattttgattaaaattaaaaatataaatgtttgttgct 19018777  T
Q  253 gtcaaattataacaaactaaactaaccat 281  Q
     |||||||||||||||  |||||||||||    
T  19018776 ctcaaattataacaaatcaaactaaccat 19018748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 831874 - 831801
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| ||||||||    
T  831874 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaac 831801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 7938008 - 7938085
Alignment:
Q  205 atgaaatattgattttgattataagtaaaat-tattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || |||||  ||| ||||||||||||  |||| |||||||||||||||||||||||    
T  7938008 atgaaattttgattttgattaaaactaaaaaatataaatgtttgttgctttcaagttataacaaactaaactaaccat 7938085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 4326227 - 4326303
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||| |  |||| ||||||||||| |||||||||||    
T  4326227 atgaaattttgattttgattaaaactaaaaatataaatgtttgtttctttcaagttataacaaaccaaactaaccat 4326303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 23270838 - 23270786
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaa 268  Q
    |||||||||| |||||||| ||||||||||||||||  |||||||||||||||    
T  23270838 attttgattaaaagtaaaaatattaatgtttgttgctttcaaattataacaaa 23270786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 2530425 - 2530356
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||| ||||||||||||| || ||||| ||| ||||||||||||  | |||||||||||||| |||||||    
T  2530425 aaattttgattttgattaaaactaaaaatataaatgtttgttgcttttaaattataacaaaccaaactaa 2530356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 17210854 - 17210782
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||    
T  17210854 atgaaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 17210782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 250
Target Start/End: Complemental strand, 19929682 - 19929585
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttg 250  Q
    |||||||| ||||||| |  ||||||||||||||||||| || ||       |  |||||||||||||||||| |||||||| ||| |||||||||||    
T  19929682 ttccgctcattttattgtgttaacgtttgaaaattatgaacggtgtttctttaaaaaatattgattttgattaaaagtaaaaatataaatgtttgttg 19929585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 28868209 - 28868277
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||||||||| || ||||| | | ||||||||||||  |||| ||||||||||| |||||||||||    
T  28868209 ttgattttgattaaaactaaaaatgtaaatgtttgttgctttcaagttataacaaaccaaactaaccat 28868277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 42027527 - 42027599
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||||||||||| ||||| || ||||| ||| ||||| ||||||  |||| ||||||||||| |||||||    
T  42027527 atgaaatattgatttggattaaaactaaaaatataaatgtctgttgctttcaagttataacaaaccaaactaa 42027599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 10721646 - 10721600
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgc 251  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||    
T  10721646 atgaaattttgattttgattaaaactaaaaatattaatgtttgttgc 10721600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 18527102 - 18527040
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||||||| | |||||||||| ||||||| ||||  |||||||||||||||  ||||||||    
T  18527102 attttgattaaaggtaaaattataaatgttttttgctttcaaattataacaaatcaaactaac 18527040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 33697275 - 33697202
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||| |||||||||||   |||| ||||||||||  |||||||||||    
T  33697275 aaattttgattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaaagcaaactaaccat 33697202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Complemental strand, 1283734 - 1283663
Alignment:
Q  206 tgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||| || |||||||||| ||||| || | ||||||| ||||||  ||||||||||||||| |||||||||    
T  1283734 tgaaattttaattttgattaaaagtataaat-ttaatgtgtgttgctttcaaattataacaaaataaactaac 1283663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 3295792 - 3295716
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| ||  |||| ||| ||||||||||||  |||| |||||| |||  |||||||||||    
T  3295792 atgaaattttgattttgattaaaacaaaaaatataaatgtttgttgctttcaagttataataaatcaaactaaccat 3295716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 16313163 - 16313087
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||| | |||||||| ||| |||| || ||||  ||||| |||||||||  |||||||||||    
T  16313163 atgaaattttgattttgatcaaaagtaaaaatataaatgctttttgctttcaaaatataacaaatcaaactaaccat 16313087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 19930501 - 19930465
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattat 189  Q
    ||||||||||||||||||  |||||||||||||||||    
T  19930501 ttccgctctttttattatgttaacgtttgaaaattat 19930465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 27905169 - 27905097
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| || |||||||||| || ||||| ||| |||||||||||   |||| ||||||||||| |||||||    
T  27905169 atgaaattttaattttgattaaaactaaaaatataaatgtttgttgttttcaagttataacaaaccaaactaa 27905097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 42097677 - 42097601
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||  ||| |||||||||||   |||| ||||||||||  |||||||||||    
T  42097677 atgaaattttgattttgattaaaactaaagatataaatgtttgttgttttcaatttataacaaatcaaactaaccat 42097601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 42506672 - 42506596
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| ||  |||| ||| |||||||||||   | ||||||||||||| ||||||||||||    
T  42506672 atgaaattttaattttgattaaaacaaaaaatataaatgtttgttgttttaaaattataacaaattaaactaaccat 42506596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 43551102 - 43551026
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| ||  |||| ||| |||||||||| || | || |||||||||  ||||||||||||    
T  43551102 atgaaattttgattttgattaaaacaaaaaatataaatgtttgttccatttaagttataacaatttaaactaaccat 43551026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 26878502 - 26878578
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||||||||||||||||  |||||||||||||||| |||||||||||    
T  26878502 atgaaattttgattttgattaaaactaaaaatattaatgtttgttgctttcaaattataacaaaccaaactaaccat 26878578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 277
Target Start/End: Original strand, 35447502 - 35447626
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgca 252  Q
    |||||||||||||||| | |||| |||| |||||||||| |||||       ||||||| || |||||||||| || ||||| ||| ||||||||||||     
T  35447502 ttccgctctttttattgtgctaaggtttaaaaattatgaacgatgtttttttatgaaatttttattttgattaaaactaaaaatataaatgtttgttgct 35447601  T
Q  253 gtcaaattataacaaactaaactaa 277  Q
     |||| |||||| |||| |||||||    
T  35447602 ttcaagttataataaaccaaactaa 35447626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 894107 - 894034
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||| ||||||||||||  |||||||||||||||  |||||||||||    
T  894107 aaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaaattataacaaatcaaactaaccat 894034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 12214451 - 12214528
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||| |  |||| ||||||||||| ||||||||||||    
T  12214451 atgaaattttgattttgattaaaattaaaaatataaatgtttgttactttcaagttataacaaaccaaactaaccata 12214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 23091197 - 23091273
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||  |||||||||||    
T  23091197 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaaccat 23091273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 47045049 - 47045121
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||    
T  47045049 atgaaattttgattttgattaaaattaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 47045121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 21796549 - 21796495
Alignment:
Q  138 gaaaagacgagcacgtt-ccgctctttttattatactaacgtttgaaaattatga 191  Q
    |||||||||| |||||| ||||||||||||||||| ||| |||||||||||||||    
T  21796549 gaaaagacgaacacgtttccgctctttttattatattaaagtttgaaaattatga 21796495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 26088908 - 26088835
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| ||||| || ||| |||| |||||||  |||||| ||||||||| ||||||||    
T  26088908 atgaaattttgattttgattaaaagtataaatataaatgattgttgctttcaaatcataacaaaccaaactaac 26088835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 282
Target Start/End: Original strand, 55232517 - 55232586
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| ||||||| ||||    
T  55232517 ttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaatcata 55232586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 56084985 - 56085058
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||| ||||    
T  56084985 aaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactagccat 56085058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 7712783 - 7712711
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||| ||  |||| ||||||||||| |||||||    
T  7712783 atgaaattttgattttgattaaaactaaaaatataaatgtttgtagctttcaagttataacaaaccaaactaa 7712711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 13781663 - 13781591
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||  |||||||    
T  13781663 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaa 13781591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 15849738 - 15849666
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||| ||||||||  |||| |||||||||||||||||||    
T  15849738 atgaaattttgatttagattaaaactaaaaatataaatatttgttgctttcaagttataacaaactaaactaa 15849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 35034695 - 35034771
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| ||| ||||||||||||  || ||||||||||||  ||| |||||||    
T  35034695 atgaaattttaattttgattaaaagtaaaaatataaatgtttgttgctttcgaattataacaaatcaaattaaccat 35034771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 17688222 - 17688147
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacca 280  Q
    ||||||| ||| ||||||||| ||  |||| ||  ||||||||||||  |||||||||||||||| ||||||||||    
T  17688222 atgaaattttgtttttgattaaaacgaaaaatagaaatgtttgttgctttcaaattataacaaacaaaactaacca 17688147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 669872 - 669834
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatga 191  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  669872 ttccgctctttttattgcactaacgtttgaaaattatga 669834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 286
Target Start/End: Complemental strand, 1397365 - 1397287
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    |||| ||||||||||||| |||||||| ||| ||||||| || |  |||||||||||||||  ||| ||||||| ||||    
T  1397365 aaattttgattttgattaaaagtaaaaatataaatgtttttttctttcaaattataacaaatcaaattaaccatgttta 1397287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 281
Target Start/End: Original strand, 56556070 - 56556108
Alignment:
Q  243 gtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||||||||| |||||||||||||||||||| |||||||    
T  56556070 gtttgttgcattcaaattataacaaactaaattaaccat 56556108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 5049125 - 5049198
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| ||||||||||||| || ||| | ||| ||||||||||||  |||| ||||||||||  ||||||||    
T  5049125 atgaaattttgattttgattaaaactaataatataaatgtttgttgctttcaagttataacaaaacaaactaac 5049198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 21122407 - 21122334
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| ||  |||| ||| |||||||||||   |||| ||||||||||| |||||||||||    
T  21122407 aaattttgattttgattaaaacaaaaaatataaatgtttgttgttttcaagttataacaaaccaaactaaccat 21122334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 278
Target Start/End: Complemental strand, 38374758 - 38374693
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||||||||| || || || ||| ||||||||||||  ||| |||||||||||| ||||||||    
T  38374758 ttgattttgattaaaaatataaatataaatgtttgttgctttcatattataacaaaccaaactaac 38374693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 2186499 - 2186431
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaacta 276  Q
    |||| ||||||||||||| ||  |||| ||| ||||||||||||  |||| ||||||||||| ||||||    
T  2186499 aaattttgattttgattaaaacaaaaaatataaatgtttgttgctttcaagttataacaaaccaaacta 2186431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 21053986 - 21054057
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||| ||||||| |||||||    
T  21053986 atgaaattttgattttgattaaaattaaaa-tataaatgtttgttgctttcaagttaaaacaaaccaaactaa 21054057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 39670345 - 39670270
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||| |||||| |  |||| |||||||||||| ||||||||||    
T  39670345 atgaaattttgattttgattaaaattaaaaatataaatatttgtttctttcaagttataacaaact-aactaaccat 39670270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Complemental strand, 46342997 - 46342953
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgtt 249  Q
    ||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  46342997 atgaaattttgattttgattaaaagtaaaaatataaatgtttgtt 46342953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 19008291 - 19008372
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||| ||||||||||||| |||||||| ||| |||| |||||||| ||||||| ||||||| |||||||||||| ||||    
T  19008291 atgaaattttgattttgattaaaagtaaaaatataaatgcttgttgcattcaaattgtaacaaaataaactaaccatgttta 19008372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 275
Target Start/End: Original strand, 31015404 - 31015474
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaact 275  Q
    ||||||| ||||||||||||| | ||| || ||| ||||||||||||| |||||||||||||||| |||||    
T  31015404 atgaaattttgattttgattaaatgtataaatataaatgtttgttgcattcaaattataacaaaccaaact 31015474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 281
Target Start/End: Original strand, 35213838 - 35213903
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||||||||| || ||||| ||| ||||||||||||  |||||||||||||||||||| |||||||    
T  35213838 attttgattaaaattaaaaatataaatgtttgttgctttcaaattataacaaactaaattaaccat 35213903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 41383821 - 41383902
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||| || ||||| |||| |||||||||||| |||| |||||||| |||||||||| |||| |||| ||||||| ||||    
T  41383821 atgaaatttttattttaattaaaagtaaaattataaatggttgttgcattcaaattatagcaaattaaattaaccatgttta 41383902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 4998379 - 4998303
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  |||||||||||    
T  4998379 atgaaatttttattttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccat 4998303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 48103566 - 48103638
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||||||||||||||  |||||||    
T  48103566 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaaattataacaaatcaaactaa 48103638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 789117 - 789163
Alignment:
Q  240 aatgtttgttgcagtcaaattataacaaactaaactaaccatattta 286  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||    
T  789117 aatgtttgttgctttcaaattataacaaactaaattaaccatattta 789163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 21993109 - 21993175
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||||| || ||||| ||| |||||||||| |  |||| ||||||||||||||||||||||||    
T  21993109 attttgattaaaactaaaaatataaatgtttgttactttcaagttataacaaactaaactaaccata 21993175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 16169876 - 16169807
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||| ||||||||||||| || ||||| ||||||| ||||||||  |||||||||||||||  |||||||    
T  16169876 aaattttgattttgattaaaactaaaaatattaatatttgttgctatcaaattataacaaaacaaactaa 16169807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 581932 - 582008
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||  |||| ||||||    
T  581932 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaataaaacgaaccat 582008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 7628984 - 7629056
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  |||||||    
T  7628984 atgaaatttttattttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaa 7629056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 8790989 - 8790913
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||  ||||||||||||  |||| ||||||||||  |||||||||||    
T  8790989 atgaaattttgattttgattaaaactaaaaatacaaatgtttgttgctttcaagttataacaaatcaaactaaccat 8790913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 9334890 - 9334818
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  | |||||||||||||  |||||||    
T  9334890 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgcttttaaattataacaaatcaaactaa 9334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 234
Target Start/End: Original strand, 15646964 - 15647045
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaa 234  Q
    ||||||||||||||||   |||||||||||||||||||| |||||       ||||||| ||||||||||||| || |||||    
T  15646964 ttccgctctttttattgcgctaacgtttgaaaattatgaacgatgtttttttatgaaattttgattttgattaaaattaaaa 15647045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 213 - 284
Target Start/End: Complemental strand, 27509821 - 27509750
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatatt 284  Q
    ||||||||| ||| || ||||| ||| |||||||||| |  |||| ||||||||||| ||||||||||||||    
T  27509821 ttgattttgtttaaaactaaaaatataaatgtttgtttctttcaagttataacaaaccaaactaaccatatt 27509750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 11485549 - 11485511
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatga 191  Q
    ||||||||||||| ||| |||||||||||||||||||||    
T  11485549 ttccgctctttttgttacactaacgtttgaaaattatga 11485511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 281
Target Start/End: Complemental strand, 39466004 - 39465942
Alignment:
Q  219 ttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || ||||| ||| ||| |||||||   ||||||||||||||||||||||||||||    
T  39466004 ttgattaaaactaaaaatataaatatttgttgttttcaaattataacaaactaaactaaccat 39465942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 1748600 - 1748540
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaa 268  Q
    |||| ||||||| ||||| || ||||| ||| ||||||||||||  |||||||||||||||    
T  1748600 aaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaaattataacaaa 1748540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 15971216 - 15971140
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| ||  |||| ||| ||||||| ||||  |||||||||||||||  |||||||||||    
T  15971216 atgaaattttaattttgattaaaaccaaaaatatgaatgttttttgctttcaaattataacaaatcaaactaaccat 15971140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 19397234 - 19397158
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| | | ||||||| ||||  |||||| ||||||||  |||||||||||    
T  19397234 atgaaattttaattttgattaaaagtaaaaatgtaaatgttttttgctttcaaatcataacaaatcaaactaaccat 19397158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 21081627 - 21081563
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| || |||||||||| || ||||| ||| ||||||||||||  || |||||||||||||    
T  21081627 atgaaattttaattttgattaaaactaaaaatataaatgtttgttgctttctaattataacaaac 21081563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 23896840 - 23896784
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||||||||| || ||||| ||| ||||||||||||  |||| |||||||||||    
T  23896840 ttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaac 23896784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 35446508 - 35446580
Alignment:
Q  206 tgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||| |||||||| |||| || ||||| | | |||||||||| |  |||||||||||||||| ||||||||    
T  35446508 tgaaattttgattttaattaaaactaaaaatgtaaatgtttgttactttcaaattataacaaaccaaactaac 35446580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 38174984 - 38175056
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| || |||||||||| || ||||| ||| ||||||| ||||  |||||||||||||||  |||||||    
T  38174984 atgaaattttaattttgattaaaattaaaaatataaatgttttttgctttcaaattataacaaatcaaactaa 38175056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 46759496 - 46759572
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| |||||||| |||| || ||||| ||| ||||||||||||   ||| ||||||||||  |||||||||||    
T  46759496 atgaaattttgattttcattaaaattaaaaatataaatgtttgttgcttacaagttataacaaatcaaactaaccat 46759572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 47901920 - 47901856
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || |||||  || ||||||||||||  |||| |||||||||||    
T  47901920 atgaaattttgattttgattaaaactaaaaaaataaatgtttgttgctttcaagttataacaaac 47901856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 24080 - 23992
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccatatttaatttgtctatttcaa 301  Q
    |||||||| |||| |||||||| ||| ||| ||||||||| | ||||||||| ||||| ||||||||||||||||||| | ||||||||    
T  24080 ttgatttttattaaaagtaaaagtataaatatttgttgcatttaaattataataaactcaactaaccatatttaatttatttatttcaa 23992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 7491180 - 7491256
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||||||| ||| ||||  |||||||||||||||| |||||||||||    
T  7491180 atgaaattttgattttgattaaaactaaaaatattaattttttttgctttcaaattataacaaaccaaactaaccat 7491256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 8574203 - 8574127
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  8574203 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccat 8574127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 20907002 - 20906880
Alignment:
Q  157 gctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtca 256  Q
    ||||||||||||   |||||||||||||||||||| |||||       | ||||| ||||||||||||| || ||||| ||| ||||||| ||||  |||    
T  20907002 gctctttttattgcgctaacgtttgaaaattatgagcgatgtttttttacgaaattttgattttgattaaaattaaaaatataaatgttttttgctttca 20906903  T
Q  257 aattataacaaactaaactaacc 279  Q
    | ||||||||||  |||||||||    
T  20906902 agttataacaaatcaaactaacc 20906880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 35547056 - 35547128
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  ||||||||||||||| ||||||||    
T  35547056 atgaaattttaattttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaattaaactaa 35547128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 36604608 - 36604684
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| || ||||| ||| ||||||| ||||  |||||||||||||||| |||||||||||    
T  36604608 atgaaattttaattttgattaaaactaaaaatataaatgttttttgctttcaaattataacaaacaaaactaaccat 36604684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 39728411 - 39728335
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||| ||| |||||||    
T  39728411 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaaataaccat 39728335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 44667921 - 44667845
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||||   |||||||||||||||  |||||||||||    
T  44667921 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgttttcaaattataacaaatcaaactaaccat 44667845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 50884529 - 50884601
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| |||||||||||||||||||    
T  50884529 atgaaattttgatttggattaaaattaaaaatataaatgtttgttgctttcaagttataacaaactaaactaa 50884601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 281
Target Start/End: Original strand, 5965583 - 5965707
Alignment:
Q  157 gctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtca 256  Q
    ||||||||||||   |||||||||||||||||||| |||||       ||||||| ||||||||||||| |||||||| ||| |||  || ||||  | |    
T  5965583 gctctttttattgctctaacgtttgaaaattatgaacgatgtatttttatgaaattttgattttgattaaaagtaaaaatataaatagtttttgctttta 5965682  T
Q  257 aattataacaaactaaactaaccat 281  Q
    |||||||||| |  |||||||||||    
T  5965683 aattataacagatcaaactaaccat 5965707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 282
Target Start/End: Original strand, 924990 - 925067
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| ||||||||||  ||||||||||||    
T  924990 atgaaattttgatttggattaaaactaaaactataaatgtttgttgctttcaagttataacaaatcaaactaaccata 925067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 11345124 - 11345050
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || ||||  ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  11345124 atgaaattttgattttgattaaaactaaatatataaatgtttgttgc--tcaagttataacaaaccaaactaaccat 11345050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 33475197 - 33475128
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    |||| ||||||||||||| ||||| || ||| |||| |||||||  |||||||||||||||| |||||||    
T  33475197 aaattttgattttgattaaaagtataaatataaatgattgttgctttcaaattataacaaaccaaactaa 33475128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 4242305 - 4242269
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattat 189  Q
    |||||||||||||||||| ||||||||||||||||||    
T  4242305 ttccgctctttttattatgctaacgtttgaaaattat 4242269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 10844102 - 10844207
Alignment:
Q  172 ctaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaacta 271  Q
    |||||||||||||||||| | |||||       ||||||| ||||||| ||||| || ||||| ||| ||||| ||||||  |||| ||||||||||| |    
T  10844102 ctaacgtttgaaaattattaacgatgttcttatatgaaattttgatttggattaaaattaaaaatataaatgtgtgttgctttcaagttataacaaacaa 10844201  T
Q  272 aactaa 277  Q
    ||||||    
T  10844202 aactaa 10844207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 31526406 - 31526470
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| |||||||||||    
T  31526406 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaatttataacaaac 31526470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 277
Target Start/End: Complemental strand, 31528859 - 31528734
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnn-atgaaatattgattttgattataagtaaaattattaatgtttgttgc 251  Q
    ||||||||||||||||  |||||| |||||||||||| | |||||        ||||| | ||||||| ||||| || ||||| ||| ||||||||||||    
T  31528859 ttccgctctttttattgcactaacatttgaaaattattaacgatgttctttttatgaagttttgatttggattaaaattaaaaatataaatgtttgttgc 31528760  T
Q  252 agtcaaattataacaaactaaactaa 277  Q
      |||| ||||||||||| |||||||    
T  31528759 tttcaagttataacaaaccaaactaa 31528734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 281
Target Start/End: Original strand, 43723712 - 43723837
Alignment:
Q  156 cgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgcagtc 255  Q
    |||||||||||||  || |||||||||||||||||| |||          |||||| ||||||||||||| || ||||| ||| ||||||||||||  ||    
T  43723712 cgctctttttattgcaccaacgtttgaaaattatgaacgacattgttttttgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttc 43723811  T
Q  256 aaattataacaaactaaactaaccat 281  Q
    || |||||| |||  |||||||||||    
T  43723812 aagttataataaatcaaactaaccat 43723837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 171 - 282
Target Start/End: Complemental strand, 5935773 - 5935661
Alignment:
Q  171 actaacgtttgaaaattatgaccgatgnnnnnnn-atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||||||||||||||||| |||||        ||||||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||| ||||     
T  5935773 actaacgtttgaaaattatgaacgatgttttagttatgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttatagcaaat 5935674  T
Q  270 taaactaaccata 282  Q
     ||| ||||||||    
T  5935673 caaattaaccata 5935661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Original strand, 34011047 - 34011085
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatga 191  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  34011047 ttccgctctttttattgcactaacgtttgaaaattatga 34011085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 43577374 - 43577448
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacc 279  Q
    ||||||| ||||||||||||| || ||||| ||| |||||||||| |  | || |||||||||| ||||||||||    
T  43577374 atgaaattttgattttgattaaaactaaaaatataaatgtttgtttcttttaagttataacaaattaaactaacc 43577448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 191
Target Start/End: Complemental strand, 49162959 - 49162921
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatga 191  Q
    ||||||||||||||||  |||||||||||||||||||||    
T  49162959 ttccgctctttttattgcactaacgtttgaaaattatga 49162921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 251
Target Start/End: Original strand, 1569912 - 1570010
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgc 251  Q
    ||||||| ||||||||||||| ||||||||||||||| |  | ||       ||||||| ||||||| ||||| || ||||| ||| ||||||||||||    
T  1569912 ttccgctttttttattatactgacgtttgaaaattattaaaggtgtttttttatgaaattttgatttggattaaaactaaaaatataaatgtttgttgc 1570010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 14594540 - 14594593
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    |||||||||| || ||||| ||| ||||||||||||  ||||||||||||||||    
T  14594540 attttgattaaaaataaaaatataaatgtttgttgctttcaaattataacaaac 14594593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 7548648 - 7548572
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| || | ||| ||| ||||||| ||||  |||| |||||| |||| |||||||||||    
T  7548648 atgaaattttgattttgattaaaacttaaaatataaatgtttattgctttcaatttataaaaaaccaaactaaccat 7548572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 12780414 - 12780342
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| ||  |||| ||| || |||||||||  |||| ||||||||||| |||||||    
T  12780414 atgaaattttgattttgattaaaataaaaaatataaacgtttgttgctttcaagttataacaaaccaaactaa 12780342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Complemental strand, 17875469 - 17875394
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||| |||||||| ||| |||  || || |  ||||||||||||||| ||||||||||||    
T  17875469 atgaaattttgattttgattaaaagtaaaaatataaattattttttctttcaaattataacaaa-taaactaaccat 17875394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Complemental strand, 33194079 - 33194015
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || |||||  || ||||||||||||  |||| |||||||||||    
T  33194079 atgaaattttgattttgattaaaactaaaaaaataaatgtttgttgctttcaatttataacaaac 33194015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 34969230 - 34969306
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||||||  |||||||||||| || ||||| ||| ||||||| || |  |||| ||||||||||| |||||||||||    
T  34969230 atgaaattgtgattttgattaaaactaaaaatataaatgtttatttctttcaagttataacaaaccaaactaaccat 34969306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 27590974 - 27590912
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    |||||||||| |||||||||||| ||||||||||||  | ||||||||||||| |||||||||    
T  27590974 attttgattaaaagtaaaattataaatgtttgttgcttttaaattataacaaaataaactaac 27590912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 33133889 - 33133965
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| || |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  |||||||||||    
T  33133889 atgaaattttaattttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccat 33133965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 43709411 - 43709487
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| |||||| ||||||||||||||||    
T  43709411 atgaaattttgatttggattaaaactaaaaatatgaatgtttgttgctttcaagttataataaactaaactaaccat 43709487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 276
Target Start/End: Complemental strand, 15265810 - 15265687
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatgnnnnnnnatgaaatattgattttgattataagtaaaattattaatgtttgttgca 252  Q
    |||||||||||||||||  |||||||||||||||||||| || ||       |||| |  ||||||||||||| || |||||  || ||| ||||||||     
T  15265810 ttccgctctttttattacgctaacgtttgaaaattatgagcggtgtttttttatgatactttgattttgattaaaactaaaaacataaatctttgttgct 15265711  T
Q  253 gtcaaattataacaaactaaacta 276  Q
     |||| ||||||||||| ||||||    
T  15265710 ttcaagttataacaaaccaaacta 15265687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 32689947 - 32690013
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||| | || ||||| ||| ||||||||||||  |||| ||||||||||||||||||||||||    
T  32689947 attttgataaaaactaaaaatataaatgtttgttgctttcaagttataacaaactaaactaaccata 32690013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 36080404 - 36080338
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccata 282  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||  ||||||||||||    
T  36080404 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaatcaaactaaccata 36080338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 31593390 - 31593463
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| || |||||||||| || ||||| ||| ||||||||||||  ||||  |||||||||||||||||||    
T  31593390 atgaaattttaattttgattaaaactaaaaatataaatgtttgttgctttcaagatataacaaactaaactaac 31593463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 274
Target Start/End: Complemental strand, 34063413 - 34063344
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaac 274  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  ||||| |||||||||| ||||    
T  34063413 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaaactataacaaaccaaac 34063344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 360524 - 360452
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| || |||||||||| || || || ||| |||| |||||||  ||||||||||||||||||||||||    
T  360524 atgaaattttaattttgattaaaaatataaatataaatgattgttgctttcaaattataacaaactaaactaa 360452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 16039534 - 16039462
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| |||||||| ||| ||||||| | ||  |||||||||||||||  |||||||    
T  16039534 atgaaattttgattttgattaaaagtaaaaatatgaatgtttttcgctttcaaattataacaaatcaaactaa 16039462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 24004979 - 24005055
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| |||||||| ||||  | ||||| ||| ||||||||||||  |||| ||||||||||| |||||||||||    
T  24004979 atgaaattttgatttttattaagactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaaccat 24005055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 24791782 - 24791858
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||||  || ||| | ||| |||||||||| |  |||||||||||||||| |||||||||||    
T  24791782 atgaaattttgattttgatttaaattaacaatataaatgtttgttactttcaaattataacaaaccaaactaaccat 24791858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 216 - 279
Target Start/End: Complemental strand, 27530527 - 27530464
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacc 279  Q
    |||||||||| ||||| || ||| |||  |||||||  ||||||||||||||||||||||||||    
T  27530527 attttgattaaaagtataaatataaattattgttgctttcaaattataacaaactaaactaacc 27530464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 7536613 - 7536684
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||  ||||||||||||  |||| ||||||||||| |||||||||||    
T  7536613 aaattttgattttgattaaaactaaaaata--aatgtttgttgctttcaagttataacaaaccaaactaaccat 7536684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 279
Target Start/End: Complemental strand, 17372594 - 17372520
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaacc 279  Q
    ||||||| || |||||||||| || ||||| ||| ||| ||||||||  |||| ||||||||||| |||||||||    
T  17372594 atgaaattttaattttgattaaaactaaaaatataaatatttgttgctttcaagttataacaaacaaaactaacc 17372520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 30976886 - 30976959
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||| ||||||| |||   |||| ||||||||||||||| |||||||    
T  30976886 aaattttgattttgattaaaattaaaaatataaatgtttattgatttcaagttataacaaactaaaataaccat 30976959  T

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Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 33133556 - 33133629
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaac 278  Q
    ||||||| |||||| |||||| || ||||| ||| ||||||||||||  | || ||||||||||| ||||||||    
T  33133556 atgaaattttgattatgattaaaactaaaaatataaatgtttgttgctttgaagttataacaaaccaaactaac 33133629  T

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Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Complemental strand, 41122854 - 41122781
Alignment:
Q  208 aaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    |||| ||||||||||||| || ||||| ||| ||||||||||||  |||| ||||||||||  |||| ||||||    
T  41122854 aaattttgattttgattaaaactaaaaatataaatgtttgttgctttcaagttataacaaatcaaacgaaccat 41122781  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 19040011 - 19039939
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| ||  |||| ||| ||||||||||||  |||| ||||||||||  |||||||    
T  19040011 atgaaattttgattttgattaaaacaaaaaatataaatgtttgttgctttcaagttataacaaatcaaactaa 19039939  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 22881477 - 22881529
Alignment:
Q  216 attttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaa 268  Q
    |||||||||| |||||||| ||| ||||||| ||||  |||||||||||||||    
T  22881477 attttgattaaaagtaaaaatataaatgttttttgctttcaaattataacaaa 22881529  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 25915102 - 25915178
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaaccat 281  Q
    ||||||| ||||||||||| | |||||||| ||| ||||||| |||   ||||||||||| |||  |||||||||||    
T  25915102 atgaaattttgattttgatcaaaagtaaaaatataaatgttttttgttttcaaattataaaaaatcaaactaaccat 25915178  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 34576292 - 34576356
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaac 269  Q
    ||||||| ||||||||||||| || ||||| ||| ||||||||||||  || | |||||||||||    
T  34576292 atgaaattttgattttgattaaaactaaaaatataaatgtttgttgctttctagttataacaaac 34576356  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 38147809 - 38147737
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||| ||||| |||||||||| |  |||| ||||||||||| |||||||    
T  38147809 atgaaattttgatttggattaaaactaatattataaatgtttgttactttcaagttataacaaaccaaactaa 38147737  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 277
Target Start/End: Complemental strand, 38692766 - 38692702
Alignment:
Q  213 ttgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||||||||| || ||||| ||| ||||||||||||  | || ||||||||||| |||||||    
T  38692766 ttgattttgattaaaactaaaaatataaatgtttgttgctttgaagttataacaaaccaaactaa 38692702  T

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Target: scaffold0445 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 5017 - 4945
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||| ||||| || ||||| ||| ||||||||||||  |||| ||||||||||| |||||||    
T  5017 atgaaattttgatttggattaaaactaaaaatataaatgtttgttgctttcaagttataacaaaccaaactaa 4945  T

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Target: scaffold0128 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 43015 - 43087
Alignment:
Q  205 atgaaatattgattttgattataagtaaaattattaatgtttgttgcagtcaaattataacaaactaaactaa 277  Q
    ||||||| ||||||||||||| |||||||| ||| |||| ||||| |  |||||||||||||||  |||||||    
T  43015 atgaaattttgattttgattaaaagtaaaaatataaatgattgtttctttcaaattataacaaagcaaactaa 43087  T

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Target: scaffold0649 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 8261 - 8305
Alignment:
Q  153 ttccgctctttttattatactaacgtttgaaaattatgaccgatg 197  Q
    |||||||||||||||||  ||||||||| |||||||||| |||||    
T  8261 ttccgctctttttattacgctaacgtttaaaaattatgaacgatg 8305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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