View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4978_high_23 (Length: 281)
Name: NF4978_high_23
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4978_high_23 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 281
Target Start/End: Original strand, 44693658 - 44693924
Alignment:
| Q |
11 |
atgaaagggacaatttcccaaaatgataggaatacaaacgagaaacacacgctggttttgtgtttcacgtacacgtcactaatttcagccatgcagttgc |
110 |
Q |
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| T |
44693658 |
atgaaagggacaatttcccaaaatgataggaatacaaacgagaaacacacgctggttttgtgtttcacgtacacgtcactaatttcagccatgcagttgc |
44693757 |
T |
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| Q |
111 |
tgcacgtggcacttccttgaaatcacgtgctttcctacgaaaccttgaaaacgaaacgagagatttgcactaacaagcacgtgcaataatcacttaagta |
210 |
Q |
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| T |
44693758 |
tgcacgtggcacttccttgaaatcacgtgctttcctacgaaaccttgaaaacgaaacgagagatttgcactaacaagcacgtgcaataatcact----ta |
44693853 |
T |
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| Q |
211 |
ttttaaaacatttcttccccagaaaagtaaaatttctttcagaattcgaacttgaaactacttacgctatc |
281 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
44693854 |
ttttaaaacatttcttccccagaaaagtaaaatttctttcagaattcgaaattgaaactacttacgctatc |
44693924 |
T |
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