View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4978_high_45 (Length: 221)
Name: NF4978_high_45
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4978_high_45 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 11746812 - 11747031
Alignment:
| Q |
1 |
atatgtgaaaatgaagtctaaaactcagtaaatgagtatttggaaattgaaagttttgatctatagtttttagtatgtcacaatcctattcctccagttg |
100 |
Q |
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| T |
11746812 |
atatgtgaaaatgaagtctaaaactcagtaaatgagtatttggaaattgaaagttttgatctatagtctttagtatgtcacaatcctattcctccagttg |
11746911 |
T |
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| Q |
101 |
aacagnnnnnnnntccaaactaatgggaattgtgcctgattaagctcatttgaaattaaaaatccatactgatattgaatgatagaaatcaggtggatat |
200 |
Q |
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| T |
11746912 |
aacag-aaaaaaatccaaactaatgggaattgtgcctgattaggttcatttgaaattaaaaatccttactgatattgaatgatagaaatcaggtggatat |
11747010 |
T |
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| Q |
201 |
ttatggcacaaacatttttaa |
221 |
Q |
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||||||||||||||||||||| |
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| T |
11747011 |
ttatggcacaaacatttttaa |
11747031 |
T |
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