View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4978_low_32 (Length: 254)
Name: NF4978_low_32
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4978_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 28410123 - 28410369
Alignment:
| Q |
1 |
ttgatagtatgtgaatagttttgtaagtgttgtttaaactttataaagtctctaatccacaagtttaactcacctagattttttaatgtcggtacgaagt |
100 |
Q |
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| T |
28410123 |
ttgatagtatgggaatagttttgtaagtgttgtttaaacttta--aagtctctaatccacaagtttaactcacctagattttttaatgtcggtacgaagt |
28410220 |
T |
|
| Q |
101 |
ggttggagtattttgtcaaaatggtttgacttaatttgtgtgaatttaatgaaaggtcccacaacagaagccataaaaagcaagcagcgattcgtatgag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28410221 |
ggttggagtattttgtcaaaatggtttgacttaatttgtgtgaatttaatgaaagggcccacaacagaagccataaaaagcaagcagcgattcgtatgag |
28410320 |
T |
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| Q |
201 |
aaaattaagaaaagcgtgttactttcgaaatggcgttggcgtgtctctg |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28410321 |
aaaattaagaaaagcgtgttactttcgaaatggcgttggcgtgtctctg |
28410369 |
T |
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