View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4978_low_7 (Length: 478)

Name: NF4978_low_7
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4978_low_7
NF4978_low_7
[»] chr5 (63 HSPs)
chr5 (254-415)||(14744672-14744833)
chr5 (259-368)||(22870451-22870560)
chr5 (259-342)||(31107933-31108016)
chr5 (259-369)||(20856934-20857044)
chr5 (264-369)||(22869612-22869717)
chr5 (262-374)||(21978000-21978112)
chr5 (259-374)||(8654109-8654224)
chr5 (262-369)||(36476770-36476877)
chr5 (262-369)||(36477364-36477471)
chr5 (254-369)||(39181054-39181169)
chr5 (259-369)||(20072857-20072967)
chr5 (262-374)||(8673741-8673853)
chr5 (262-369)||(16532898-16533005)
chr5 (259-374)||(25253088-25253203)
chr5 (259-374)||(25316878-25316993)
chr5 (259-369)||(20072123-20072233)
chr5 (259-369)||(20857535-20857645)
chr5 (259-373)||(21978955-21979069)
chr5 (295-373)||(39402132-39402210)
chr5 (271-374)||(14745462-14745565)
chr5 (259-374)||(32052491-32052606)
chr5 (259-369)||(16533613-16533723)
chr5 (259-369)||(39181784-39181894)
chr5 (254-374)||(33735580-33735700)
chr5 (259-374)||(33735315-33735430)
chr5 (262-374)||(21972095-21972206)
chr5 (260-364)||(31108331-31108434)
chr5 (286-374)||(37945023-37945111)
chr5 (271-374)||(7015522-7015625)
chr5 (259-374)||(25253353-25253468)
chr5 (259-374)||(25317144-25317259)
chr5 (271-360)||(21260879-21260968)
chr5 (259-374)||(13064676-13064791)
chr5 (259-374)||(32052226-32052341)
chr5 (271-372)||(14745582-14745683)
chr5 (277-372)||(6421891-6421986)
chr5 (259-374)||(12991055-12991170)
chr5 (259-360)||(18934715-18934816)
chr5 (277-374)||(8323323-8323420)
chr5 (279-360)||(22024151-22024232)
chr5 (271-360)||(22533671-22533760)
chr5 (259-364)||(37945271-37945375)
chr5 (260-374)||(6421625-6421739)
chr5 (286-364)||(18013641-18013719)
chr5 (295-360)||(7015790-7015855)
chr5 (271-360)||(8323070-8323159)
chr5 (271-321)||(31118969-31119019)
chr5 (278-360)||(34404505-34404586)
chr5 (271-324)||(6421829-6421882)
chr5 (271-360)||(16118232-16118321)
chr5 (271-324)||(18013736-18013789)
chr5 (271-364)||(27753493-27753585)
chr5 (271-324)||(33735520-33735573)
chr5 (276-364)||(18934991-18935078)
chr5 (255-374)||(20704980-20705100)
chr5 (310-360)||(27753760-27753810)
chr5 (286-360)||(41339634-41339708)
chr5 (271-324)||(12990912-12990965)
chr5 (271-324)||(13064533-13064586)
chr5 (271-364)||(18013889-18013981)
chr5 (271-324)||(25253210-25253263)
chr5 (271-324)||(32052431-32052484)
chr5 (257-321)||(41339547-41339611)
[»] scaffold0009 (2 HSPs)
scaffold0009 (259-418)||(261003-261162)
scaffold0009 (254-373)||(262425-262544)
[»] chr4 (61 HSPs)
chr4 (260-418)||(54590146-54590304)
chr4 (259-373)||(54591560-54591676)
chr4 (259-373)||(53477064-53477178)
chr4 (254-369)||(23455677-23455792)
chr4 (262-369)||(38982584-38982691)
chr4 (259-350)||(23454956-23455047)
chr4 (254-369)||(56556579-56556694)
chr4 (259-369)||(38813556-38813666)
chr4 (254-369)||(38814315-38814430)
chr4 (254-369)||(52816411-52816526)
chr4 (259-369)||(56557313-56557423)
chr4 (253-369)||(52815659-52815775)
chr4 (254-374)||(53559654-53559774)
chr4 (254-374)||(55013072-55013191)
chr4 (259-370)||(13336825-13336936)
chr4 (259-374)||(22250000-22250115)
chr4 (259-374)||(33294410-33294525)
chr4 (262-373)||(9254411-9254522)
chr4 (259-374)||(47981903-47982018)
chr4 (260-374)||(12691672-12691786)
chr4 (254-364)||(54961428-54961538)
chr4 (286-374)||(20086466-20086554)
chr4 (254-374)||(22249730-22249850)
chr4 (262-354)||(22882330-22882422)
chr4 (262-354)||(22933994-22934086)
chr4 (286-374)||(47862419-47862507)
chr4 (271-374)||(12691420-12691523)
chr4 (259-374)||(13872336-13872451)
chr4 (271-374)||(47862166-47862269)
chr4 (259-373)||(53475833-53475947)
chr4 (271-370)||(8287204-8287303)
chr4 (271-374)||(19916670-19916773)
chr4 (271-360)||(8286946-8287035)
chr4 (271-360)||(35730942-35731031)
chr4 (271-360)||(37678129-37678218)
chr4 (271-360)||(50246139-50246228)
chr4 (257-374)||(54961698-54961815)
chr4 (262-374)||(22881172-22881284)
chr4 (262-374)||(22932836-22932948)
chr4 (280-360)||(32846385-32846465)
chr4 (258-374)||(47980686-47980802)
chr4 (259-374)||(13872071-13872186)
chr4 (271-374)||(50245871-50245974)
chr4 (286-374)||(34238499-34238587)
chr4 (259-374)||(33294146-33294261)
chr4 (271-374)||(37677862-37677965)
chr4 (286-360)||(489465-489539)
chr4 (286-360)||(515257-515331)
chr4 (271-324)||(22249940-22249993)
chr4 (293-374)||(26601343-26601424)
chr4 (310-374)||(53559440-53559504)
chr4 (314-360)||(10128763-10128809)
chr4 (271-324)||(12691530-12691583)
chr4 (259-324)||(33294268-33294333)
chr4 (271-324)||(47862276-47862329)
chr4 (271-324)||(53559511-53559564)
chr4 (276-360)||(27813068-27813152)
chr4 (271-360)||(19916937-19917026)
chr4 (271-324)||(20086644-20086697)
chr4 (271-324)||(34238594-34238647)
chr4 (314-354)||(35596480-35596520)
[»] chr8 (80 HSPs)
chr8 (259-374)||(38598966-38599081)
chr8 (259-374)||(25288059-25288174)
chr8 (259-373)||(7393129-7393243)
chr8 (254-374)||(33497599-33497719)
chr8 (259-374)||(1231528-1231643)
chr8 (262-374)||(4970130-4970242)
chr8 (253-369)||(34213760-34213876)
chr8 (259-369)||(34665772-34665882)
chr8 (259-374)||(4463409-4463524)
chr8 (259-369)||(34214516-34214627)
chr8 (259-360)||(1232796-1232895)
chr8 (262-374)||(24377186-24377298)
chr8 (254-374)||(36623620-36623740)
chr8 (259-374)||(43866713-43866828)
chr8 (264-374)||(24378979-24379089)
chr8 (259-373)||(27437503-27437617)
chr8 (254-374)||(25287789-25287909)
chr8 (259-374)||(23424779-23424894)
chr8 (259-374)||(27436565-27436680)
chr8 (262-373)||(29574747-29574858)
chr8 (259-374)||(36623354-36623469)
chr8 (299-373)||(7392250-7392324)
chr8 (260-374)||(27857009-27857123)
chr8 (262-372)||(36574822-36574932)
chr8 (256-374)||(37343049-37343167)
chr8 (261-374)||(33497020-33497133)
chr8 (271-374)||(7660-7763)
chr8 (259-374)||(547433-547547)
chr8 (271-374)||(29190426-29190529)
chr8 (262-369)||(34666529-34666635)
chr8 (257-364)||(41801816-41801923)
chr8 (259-374)||(43866978-43867093)
chr8 (271-374)||(20096288-20096394)
chr8 (262-374)||(29575868-29575980)
chr8 (254-374)||(41182163-41182283)
chr8 (271-374)||(20096034-20096137)
chr8 (271-360)||(40422441-40422530)
chr8 (254-374)||(11478142-11478262)
chr8 (286-374)||(11478412-11478500)
chr8 (278-374)||(40525528-40525624)
chr8 (271-374)||(29190174-29190277)
chr8 (276-374)||(40525774-40525872)
chr8 (280-360)||(9632351-9632431)
chr8 (271-374)||(547702-547805)
chr8 (271-374)||(23424526-23424629)
chr8 (271-374)||(37342796-37342899)
chr8 (271-374)||(40422174-40422277)
chr8 (260-374)||(7396-7510)
chr8 (259-374)||(26739984-26740100)
chr8 (257-357)||(31690180-31690279)
chr8 (262-329)||(36576029-36576096)
chr8 (271-374)||(41251137-41251240)
chr8 (259-373)||(38600218-38600332)
chr8 (293-374)||(26739753-26739834)
chr8 (271-324)||(36623560-36623613)
chr8 (271-324)||(37342989-37343042)
chr8 (271-324)||(43866835-43866888)
chr8 (302-374)||(27856787-27856859)
chr8 (276-360)||(31689914-31689998)
chr8 (271-374)||(35163511-35163614)
chr8 (307-354)||(41767663-41767710)
chr8 (307-354)||(41773617-41773664)
chr8 (258-360)||(15716157-15716259)
chr8 (278-364)||(38619819-38619905)
chr8 (301-359)||(41802098-41802156)
chr8 (271-324)||(547642-547695)
chr8 (262-299)||(4462144-4462181)
chr8 (259-360)||(22763597-22763698)
chr8 (271-324)||(25287916-25287969)
chr8 (258-314)||(41802010-41802066)
chr8 (271-374)||(41251393-41251496)
chr8 (311-373)||(4462179-4462241)
chr8 (259-324)||(7588-7653)
chr8 (271-324)||(11478269-11478322)
chr8 (271-360)||(13566424-13566513)
chr8 (271-324)||(23424636-23424689)
chr8 (271-324)||(29190366-29190419)
chr8 (271-324)||(40525631-40525684)
chr8 (316-360)||(23514080-23514124)
chr8 (308-360)||(24529729-24529781)
[»] chr1 (82 HSPs)
chr1 (254-418)||(2828190-2828354)
chr1 (262-374)||(32619389-32619501)
chr1 (262-374)||(6345620-6345732)
chr1 (259-373)||(2829523-2829644)
chr1 (262-369)||(46282781-46282888)
chr1 (259-374)||(51935182-51935297)
chr1 (262-374)||(32238704-32238816)
chr1 (262-369)||(50062936-50063043)
chr1 (259-369)||(46282073-46282183)
chr1 (259-369)||(49093043-49093153)
chr1 (260-357)||(25064936-25065033)
chr1 (260-357)||(25065958-25066055)
chr1 (262-374)||(6344260-6344372)
chr1 (262-374)||(32622339-32622451)
chr1 (259-374)||(2953731-2953846)
chr1 (276-374)||(5183773-5183871)
chr1 (259-357)||(13295137-13295235)
chr1 (262-374)||(52563656-52563768)
chr1 (259-374)||(1047471-1047586)
chr1 (271-374)||(19755672-19755775)
chr1 (259-374)||(25414846-25414961)
chr1 (259-374)||(37152805-37152920)
chr1 (271-374)||(46849925-46850028)
chr1 (260-374)||(49002879-49002993)
chr1 (254-374)||(739216-739336)
chr1 (259-374)||(1040300-1040415)
chr1 (259-374)||(1047206-1047321)
chr1 (259-373)||(28534780-28534894)
chr1 (259-374)||(29043022-29043137)
chr1 (259-329)||(13295608-13295678)
chr1 (280-374)||(29980905-29980999)
chr1 (262-374)||(5926524-5926636)
chr1 (271-374)||(5926788-5926891)
chr1 (259-374)||(6056378-6056493)
chr1 (259-374)||(26953103-26953218)
chr1 (271-374)||(33347683-33347786)
chr1 (271-374)||(49003142-49003245)
chr1 (286-360)||(10019654-10019728)
chr1 (254-360)||(24701550-24701656)
chr1 (295-369)||(49093801-49093875)
chr1 (259-359)||(6056660-6056761)
chr1 (275-360)||(46545012-46545097)
chr1 (259-374)||(2953466-2953581)
chr1 (259-374)||(5183508-5183623)
chr1 (259-374)||(26953368-26953483)
chr1 (259-374)||(33347418-33347533)
chr1 (262-374)||(52564934-52565046)
chr1 (271-374)||(12577279-12577382)
chr1 (260-374)||(29980642-29980756)
chr1 (259-364)||(12577012-12577117)
chr1 (300-369)||(50062246-50062315)
chr1 (286-374)||(29042784-29042872)
chr1 (276-360)||(33030353-33030437)
chr1 (254-325)||(36380181-36380253)
chr1 (259-374)||(739485-739600)
chr1 (271-374)||(25415111-25415214)
chr1 (262-373)||(36381406-36381517)
chr1 (271-374)||(37152552-37152655)
chr1 (277-374)||(46364842-46364939)
chr1 (254-374)||(24701267-24701387)
chr1 (278-374)||(33030602-33030698)
chr1 (259-374)||(8890214-8890328)
chr1 (271-324)||(6056500-6056553)
chr1 (271-324)||(12577219-12577272)
chr1 (271-324)||(29042879-29042932)
chr1 (271-324)||(46364782-46364835)
chr1 (271-358)||(6334670-6334757)
chr1 (293-364)||(37152469-37152540)
chr1 (259-374)||(49990063-49990178)
chr1 (270-324)||(1040422-1040476)
chr1 (270-324)||(1047328-1047382)
chr1 (254-360)||(8890490-8890596)
chr1 (316-374)||(30830398-30830456)
chr1 (271-321)||(33347623-33347673)
chr1 (294-360)||(35312257-35312323)
chr1 (286-360)||(48380710-48380784)
chr1 (320-374)||(48380950-48381004)
chr1 (292-374)||(49989830-49989912)
chr1 (271-324)||(26953308-26953361)
chr1 (271-324)||(49003082-49003135)
chr1 (259-324)||(52454950-52455015)
chr1 (271-323)||(29980845-29980897)
[»] chr7 (58 HSPs)
chr7 (259-374)||(12929289-12929404)
chr7 (259-374)||(12930774-12930889)
chr7 (134-256)||(46812971-46813090)
chr7 (259-359)||(7158233-7158333)
chr7 (254-374)||(37284106-37284226)
chr7 (254-374)||(37289293-37289413)
chr7 (254-369)||(12643097-12643212)
chr7 (259-357)||(38643552-38643650)
chr7 (259-369)||(4227160-4227270)
chr7 (259-370)||(4226127-4226238)
chr7 (254-357)||(45915808-45915911)
chr7 (259-369)||(12644121-12644231)
chr7 (259-369)||(27479989-27480099)
chr7 (262-369)||(22661362-22661469)
chr7 (254-369)||(47558027-47558142)
chr7 (31-109)||(46814326-46814404)
chr7 (254-373)||(7159197-7159315)
chr7 (259-373)||(37563622-37563736)
chr7 (262-373)||(31695598-31695709)
chr7 (259-374)||(37563356-37563471)
chr7 (259-374)||(43938161-43938276)
chr7 (259-369)||(27480735-27480845)
chr7 (259-369)||(45914528-45914636)
chr7 (259-374)||(43937896-43938011)
chr7 (262-374)||(31694476-31694588)
chr7 (271-374)||(12931005-12931108)
chr7 (262-373)||(40021496-40021607)
chr7 (259-357)||(38644660-38644758)
chr7 (262-359)||(40022527-40022623)
chr7 (254-374)||(26825627-26825747)
chr7 (254-374)||(34454747-34454867)
chr7 (259-374)||(12929521-12929636)
chr7 (271-374)||(27558119-27558222)
chr7 (276-374)||(26830008-26830106)
chr7 (271-373)||(5280286-5280388)
chr7 (259-364)||(34454486-34454591)
chr7 (276-360)||(5636045-5636128)
chr7 (307-374)||(47738980-47739047)
chr7 (286-360)||(19979980-19980053)
chr7 (259-324)||(15827916-15827981)
chr7 (271-360)||(20947207-20947296)
chr7 (259-324)||(26825825-26825890)
chr7 (271-360)||(27557862-27557951)
chr7 (254-374)||(12928034-12928153)
chr7 (286-357)||(26828504-26828575)
chr7 (307-374)||(47733070-47733137)
chr7 (276-374)||(12928306-12928404)
chr7 (278-364)||(26825907-26825993)
chr7 (271-324)||(34454687-34454740)
chr7 (271-324)||(37563561-37563614)
chr7 (293-357)||(44545879-44545943)
chr7 (254-374)||(47081844-47081964)
chr7 (311-374)||(23191121-23191184)
chr7 (259-314)||(47121411-47121466)
chr7 (270-324)||(43938100-43938154)
chr7 (271-324)||(12929461-12929514)
chr7 (271-364)||(25049438-25049531)
chr7 (294-374)||(5636292-5636372)
[»] chr6 (47 HSPs)
chr6 (239-374)||(17784368-17784503)
chr6 (259-367)||(33401116-33401224)
chr6 (263-349)||(8427373-8427459)
chr6 (259-369)||(33399968-33400078)
chr6 (253-369)||(14656476-14656592)
chr6 (259-369)||(4116801-4116911)
chr6 (259-369)||(4117535-4117645)
chr6 (259-374)||(13480210-13480325)
chr6 (259-374)||(23291746-23291861)
chr6 (259-373)||(8427202-8427316)
chr6 (260-369)||(1661418-1661527)
chr6 (259-374)||(5064337-5064452)
chr6 (259-369)||(14657197-14657307)
chr6 (260-374)||(5064602-5064716)
chr6 (278-374)||(32337834-32337930)
chr6 (271-374)||(32337578-32337681)
chr6 (253-374)||(15819757-15819878)
chr6 (259-364)||(30234869-30234974)
chr6 (259-374)||(737964-738079)
chr6 (259-374)||(13480475-13480590)
chr6 (276-374)||(22494147-22494245)
chr6 (259-360)||(3299840-3299941)
chr6 (259-374)||(20560930-20561045)
chr6 (293-364)||(20994968-20995039)
chr6 (259-374)||(23292011-23292126)
chr6 (271-364)||(9607593-9607686)
chr6 (271-360)||(7612562-7612651)
chr6 (259-374)||(21880366-21880481)
chr6 (271-374)||(21880631-21880734)
chr6 (271-374)||(26503621-26503724)
chr6 (293-374)||(20561194-20561275)
chr6 (293-360)||(1066420-1066487)
chr6 (259-324)||(20561122-20561187)
chr6 (271-324)||(23291868-23291921)
chr6 (271-360)||(31386813-31386902)
chr6 (271-360)||(31879472-31879560)
chr6 (271-323)||(13480333-13480385)
chr6 (286-374)||(22493910-22493997)
chr6 (279-374)||(3299581-3299676)
chr6 (271-326)||(16704624-16704679)
chr6 (259-374)||(20994821-20994935)
chr6 (258-324)||(22494004-22494070)
chr6 (271-360)||(20774103-20774192)
chr6 (271-324)||(32337688-32337741)
chr6 (271-357)||(3586495-3586578)
chr6 (271-323)||(5064542-5064594)
chr6 (254-374)||(7612816-7612936)
[»] scaffold1493 (3 HSPs)
scaffold1493 (259-374)||(595-710)
scaffold1493 (254-374)||(860-980)
scaffold1493 (271-324)||(800-853)
[»] chr2 (62 HSPs)
chr2 (259-374)||(20101772-20101887)
chr2 (259-374)||(24387353-24387468)
chr2 (259-369)||(25623290-25623400)
chr2 (259-369)||(25624421-25624531)
chr2 (264-373)||(19620777-19620886)
chr2 (259-374)||(20103127-20103242)
chr2 (254-369)||(29957814-29957929)
chr2 (254-360)||(20982521-20982627)
chr2 (259-369)||(20983249-20983359)
chr2 (259-357)||(24388256-24388354)
chr2 (271-374)||(16367230-16367333)
chr2 (262-372)||(43236509-43236619)
chr2 (245-374)||(16366951-16367080)
chr2 (259-360)||(29958544-29958645)
chr2 (259-374)||(1149939-1150054)
chr2 (259-357)||(10446834-10446932)
chr2 (254-374)||(1150204-1150324)
chr2 (254-374)||(20911127-20911247)
chr2 (259-374)||(32519157-32519272)
chr2 (254-374)||(32519422-32519542)
chr2 (262-374)||(33881580-33881692)
chr2 (256-374)||(33882857-33882973)
chr2 (262-372)||(43237705-43237815)
chr2 (269-374)||(23206391-23206496)
chr2 (269-374)||(23677995-23678100)
chr2 (259-370)||(22731803-22731914)
chr2 (259-374)||(45663775-45663890)
chr2 (271-360)||(9694023-9694112)
chr2 (261-372)||(7981051-7981162)
chr2 (307-374)||(13646130-13646197)
chr2 (307-374)||(13652076-13652143)
chr2 (271-357)||(17366640-17366726)
chr2 (260-374)||(18476910-18477024)
chr2 (260-374)||(19606920-19607034)
chr2 (270-364)||(37985004-37985098)
chr2 (254-364)||(43681853-43681963)
chr2 (271-360)||(28599441-28599530)
chr2 (294-374)||(17580365-17580445)
chr2 (315-359)||(19619584-19619628)
chr2 (279-374)||(8089474-8089569)
chr2 (262-374)||(23183600-23183716)
chr2 (262-374)||(23594857-23594973)
chr2 (286-360)||(41846673-41846747)
chr2 (260-357)||(18477160-18477257)
chr2 (271-360)||(22309712-22309801)
chr2 (271-364)||(41846406-41846499)
chr2 (262-330)||(7983837-7983905)
chr2 (286-374)||(9693771-9693859)
chr2 (258-326)||(21103087-21103150)
chr2 (254-352)||(17580613-17580712)
chr2 (259-374)||(20911397-20911511)
chr2 (254-364)||(22309428-22309538)
chr2 (301-374)||(17366889-17366962)
chr2 (271-324)||(32519279-32519332)
chr2 (301-360)||(4375593-4375652)
chr2 (271-374)||(4375818-4375921)
chr2 (293-360)||(5608875-5608942)
chr2 (271-374)||(28599694-28599797)
chr2 (286-374)||(8089720-8089805)
chr2 (271-360)||(9959106-9959195)
chr2 (271-324)||(22731739-22731792)
chr2 (254-374)||(855380-855499)
[»] scaffold0347 (2 HSPs)
scaffold0347 (254-357)||(14593-14696)
scaffold0347 (259-357)||(13611-13709)
[»] chr3 (59 HSPs)
chr3 (259-369)||(32717093-32717203)
chr3 (259-374)||(22736673-22736788)
chr3 (254-357)||(29192993-29193096)
chr3 (259-369)||(45279272-45279382)
chr3 (262-374)||(44476054-44476166)
chr3 (262-374)||(44481936-44482048)
chr3 (262-369)||(29192040-29192147)
chr3 (262-369)||(37249204-37249311)
chr3 (259-369)||(2944654-2944764)
chr3 (259-369)||(11026620-11026730)
chr3 (262-369)||(45278549-45278656)
chr3 (262-369)||(48188383-48188490)
chr3 (254-369)||(48189087-48189202)
chr3 (259-360)||(1757301-1757402)
chr3 (271-369)||(43105822-43105920)
chr3 (259-374)||(1741389-1741504)
chr3 (259-369)||(2943915-2944025)
chr3 (271-374)||(22129020-22129123)
chr3 (262-369)||(37249786-37249892)
chr3 (271-369)||(1756564-1756662)
chr3 (259-374)||(10998140-10998255)
chr3 (260-374)||(55036936-55037050)
chr3 (259-360)||(43105235-43105336)
chr3 (254-374)||(51279228-51279348)
chr3 (271-374)||(55036683-55036786)
chr3 (254-374)||(11312732-11312852)
chr3 (271-374)||(40256888-40256991)
chr3 (283-369)||(11025963-11026049)
chr3 (301-374)||(22735403-22735476)
chr3 (271-359)||(53037041-53037129)
chr3 (271-374)||(10749332-10749435)
chr3 (271-374)||(33458185-33458288)
chr3 (288-374)||(22129276-22129362)
chr3 (271-374)||(10749663-10749766)
chr3 (287-374)||(24576562-24576649)
chr3 (286-357)||(46670539-46670610)
chr3 (256-374)||(53037294-53037412)
chr3 (259-374)||(10997879-10997991)
chr3 (271-324)||(21300340-21300393)
chr3 (293-374)||(30804115-30804196)
chr3 (310-374)||(10749586-10749650)
chr3 (294-374)||(40257140-40257220)
chr3 (286-372)||(30890476-30890562)
chr3 (276-374)||(46670267-46670365)
chr3 (271-324)||(55036793-55036846)
chr3 (296-372)||(20974973-20975049)
chr3 (256-360)||(30803845-30803949)
chr3 (311-374)||(11313002-11313065)
chr3 (271-374)||(21300400-21300503)
chr3 (281-360)||(28310629-28310708)
chr3 (293-360)||(30890243-30890310)
chr3 (278-360)||(21255812-21255894)
chr3 (278-360)||(33989035-33989117)
chr3 (271-324)||(10749442-10749495)
chr3 (271-324)||(21255738-21255791)
chr3 (271-324)||(22129130-22129183)
chr3 (292-369)||(32716284-32716361)
chr3 (293-374)||(33989286-33989367)
chr3 (334-374)||(21300210-21300250)
[»] scaffold0182 (2 HSPs)
scaffold0182 (259-374)||(14360-14475)
scaffold0182 (254-374)||(13131-13251)
[»] scaffold0018 (1 HSPs)
scaffold0018 (259-374)||(73111-73226)
[»] scaffold0206 (1 HSPs)
scaffold0206 (254-374)||(10322-10442)
[»] scaffold0321 (3 HSPs)
scaffold0321 (254-372)||(10659-10777)
scaffold0321 (259-374)||(10929-11044)
scaffold0321 (271-324)||(10786-10839)
[»] scaffold0279 (2 HSPs)
scaffold0279 (271-374)||(10867-10970)
scaffold0279 (271-360)||(11138-11227)
[»] scaffold0201 (2 HSPs)
scaffold0201 (293-374)||(14160-14241)
scaffold0201 (254-374)||(13890-14010)
[»] scaffold0233 (2 HSPs)
scaffold0233 (252-360)||(8428-8536)
scaffold0233 (254-374)||(8699-8819)
[»] scaffold0202 (2 HSPs)
scaffold0202 (271-360)||(14249-14338)
scaffold0202 (276-357)||(14518-14599)
[»] scaffold0022 (1 HSPs)
scaffold0022 (259-374)||(120467-120580)


Alignment Details
Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 254 - 415
Target Start/End: Complemental strand, 14744833 - 14744672
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14744833 aaaggcttaaatatgcatttcatccctgcaattatatgtcatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 14744734  T
Q  354 atttgaattttcgtcctaattnnnnnnntttgcttaggtggatggcaaagaccattttaccc 415  Q
    |||||||||||||||||||||       |||||||||||||| |||||||||||||||||||    
T  14744733 atttgaattttcgtcctaattaaaaaaatttgcttaggtggacggcaaagaccattttaccc 14744672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 22870560 - 22870451
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||     
T  22870560 cttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattta 22870461  T
Q  359 aattttcgtc 368  Q
    || |||||||    
T  22870460 aaatttcgtc 22870451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 259 - 342
Target Start/End: Original strand, 31107933 - 31108016
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgc 342  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  31107933 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttacccctgc 31108016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 20856934 - 20857044
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  20856934 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttg 20857033  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  20857034 aaatttcgtcc 20857044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 264 - 369
Target Start/End: Original strand, 22869612 - 22869717
Alignment:
Q  264 atatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattt 363  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||||| || ||    
T  22869612 atatgcatttcatccttgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaaccatttaaaatt 22869711  T
Q  364 tcgtcc 369  Q
    ||||||    
T  22869712 tcgtcc 22869717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 21978112 - 21978000
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||| || || ||||||||||||     
T  21978112 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccactttgcccctgtaattactaatcatttgaaa 21978013  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  21978012 attcgtcctaatt 21978000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 8654109 - 8654224
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||| |||||||| || ||||||||||    
T  8654109 cttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccatgagcttactaatcctcccattttgtccctgcaattactaatcatttg 8654208  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  8654209 aaaattcgtcctaatt 8654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 36476770 - 36476877
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || || || ||||||||||||     
T  36476770 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccttgtaattactaatcatttgaaa 36476869  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  36476870 gttcgtcc 36476877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 36477471 - 36477364
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||| || || ||||||||||||     
T  36477471 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 36477372  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  36477371 gttcgtcc 36477364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 39181054 - 39181169
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||    
T  39181054 aaaggcttaaatatgcttttcatccctgtaattataagccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 39181153  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  39181154 atttgaaagttcgtcc 39181169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 20072967 - 20072857
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  20072967 cttaaatatgcttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 20072868  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  20072867 aaagttcgtcc 20072857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 8673853 - 8673741
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||| ||||||| ||||| |||||||||||||| ||||| | |||||||||||||     
T  8673853 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttgctaattctcccattttgcccttgcaattgttaatcatttgaaa 8673754  T
Q  362 tttcgtcctaatt 374  Q
    |||| ||||||||    
T  8673753 tttcatcctaatt 8673741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 16532898 - 16533005
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| || || ||||||||||||     
T  16532898 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttattaatccttccattttgcccctgtaattactaatcatttgaaa 16532997  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  16532998 gttcgtcc 16533005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 25253088 - 25253203
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||||||||||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  25253088 cttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttg 25253187  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  25253188 acttttggtcctaatt 25253203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 25316878 - 25316993
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||||||||||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  25316878 cttaaatatgtctttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttg 25316977  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  25316978 acttttggtcctaatt 25316993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 20072123 - 20072233
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| || || ||||||||||    
T  20072123 cttaaatatgcttttcatctctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttg 20072222  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  20072223 aaagttcgtcc 20072233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 20857645 - 20857535
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| |||||||| || ||||||||||| ||||||||||||| ||| | ||||||||||||||||||||||||||| |||  |||||||||||    
T  20857645 cttaaatatgcttttcatccatgtaattataggccgtttgatttttcattcctaagcttactaatcctcccattttgcccctgtaaaagttaatcatttg 20857546  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  20857545 aaatttcgtcc 20857535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 21979069 - 21978955
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||  ||||| ||| |||||| |||||    
T  21979069 cttaaatatgcatttcatccctgcaattataagccatttgatttttcatcctcgaacttactaatcctcctattttatccctgtaaaaattaataatttg 21978970  T
Q  359 aattttcgtcctaat 373  Q
     | ||| ||||||||    
T  21978969 gaatttagtcctaat 21978955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 295 - 373
Target Start/End: Complemental strand, 39402210 - 39402132
Alignment:
Q  295 tttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaat 373  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  39402210 tttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatattaatcatttgagttttggtcctaat 39402132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 14745462 - 14745565
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||    
T  14745462 tttcgtccctgcaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 14745561  T
Q  371 aatt 374  Q
    ||||    
T  14745562 aatt 14745565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 32052606 - 32052491
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  32052606 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 32052507  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  32052506 acttttggtcctaatt 32052491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 16533723 - 16533613
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||  ||||||||||| |||||||||||||| ||||||||| ||||||| |||||||||||||| || || ||||||||||    
T  16533723 cttaaatatgcttttcatccctataattataggccgtttgatttttcatctctgaacttattaatccttccattttgcccctgtaattactaatcatttg 16533624  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  16533623 aaagttcgtcc 16533613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 39181894 - 39181784
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  39181894 cttaaatatgtttttaatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 39181795  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  39181794 aaagttcgtcc 39181784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 33735700 - 33735580
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  33735700 aaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 33735601  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  33735600 atttgacttttggtcctaatt 33735580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 33735315 - 33735430
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||| ||| |||||||||||||||||||| |||||||| ||||||||||| ||| | || ||||||||||||||||||||||    
T  33735315 cttaaatatgtctttcgtccctacaaatataggccatttgatttttcgtccctgaaattactaatccttccaatctgtccctgcaaatattaatcatttg 33735414  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| || ||||||    
T  33735415 acttttggttctaatt 33735430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 21972095 - 21972206
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  ||||||||||| |||||| |||||||||||||||||||| | | |||||||||||||||||||||| |||| || || ||||||||||||     
T  21972095 aaatatgtttttcatccctgtaattatgggccatttgatttttcatcc-tcagcttactaatcctcccattttgctcctgtaattactaatcatttgaaa 21972193  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  21972194 attcgtcctaatt 21972206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 31108434 - 31108331
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    ||||||||| ||||||||||||||| ||||| | |||||||||||||||| |||||||||||||| | |||||||  ||||| ||||||||||||||| |    
T  31108434 ttaaatatgtatttcatccctgcaaatatagac-atttgatttttcatccatgaacttactaatctttccattttatccctgtaaatattaatcatttta 31108336  T
Q  360 atttt 364  Q
    |||||    
T  31108335 atttt 31108331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 37945023 - 37945111
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||    
T  37945023 tataggtcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatt 37945111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 7015522 - 7015625
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||||||| ||||||||| |||| ||||||||| | ||| | |||| ||||||||||||||||||||| |||| |||||    
T  7015522 tttcgtccctgcaaatataggccatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttgacttttggtcct 7015621  T
Q  371 aatt 374  Q
    ||||    
T  7015622 aatt 7015625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 25253468 - 25253353
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |||||||| ||||||||||    
T  25253468 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttg 25253369  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  25253368 acttttggtcctaatt 25253353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 25317259 - 25317144
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |||||||| ||||||||||    
T  25317259 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatactaatcatttg 25317160  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  25317159 acttttggtcctaatt 25317144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 21260879 - 21260968
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  21260879 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 21260968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 13064791 - 13064676
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||| | ||||||| ||||| || || || ||||||||||| ||| | |||||||||||||||||||||||||    
T  13064791 cttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctaaagttactaatccttccaatctgcccctgcaaatattaatcatttg 13064692  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  13064691 acttttggtcctaatt 13064676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 32052226 - 32052341
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| |  ||||||||||||||||||||||||    
T  32052226 cttaaatatgtttttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttg 32052325  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  32052326 acttttgatcctaatt 32052341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 372
Target Start/End: Complemental strand, 14745683 - 14745582
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||| ||| |||||||||||||| ||||| || ||||| ||||||||||| ||| | ||||| |||||||||||||||||||| |||| |||||    
T  14745683 tttcgtccctacaaatataggccatttgaattttcgtcgctgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct 14745584  T
Q  371 aa 372  Q
    ||    
T  14745583 aa 14745582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 277 - 372
Target Start/End: Complemental strand, 6421986 - 6421891
Alignment:
Q  277 ccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaa 372  Q
    |||||||| |||| | ||||||| ||||| |||||||| |||||||||||  || | |||||||||||||||||||||||||| |||| |||||||    
T  6421986 ccctgcaaatataagtcatttgaattttcgtccctgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttggtcctaa 6421891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 12991170 - 12991055
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||| | ||||||| ||||| || ||||| ||||||||||| ||| | | |||||||||||||||||||||||    
T  12991170 cttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctacccctgcaaatattaatcatttg 12991071  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  12991070 acttttgatcctaatt 12991055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 18934715 - 18934816
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||||||||||||| |||| | ||||||| ||||| ||| |||| |||||||||||  |||||||||  ||||||||||| |||||||    
T  18934715 cttaaatatgtctttcatccctgcaaatataagtcatttgaattttcgtccatgaagttactaatcctttcattttgccattgcaaatattagtcatttg 18934814  T
Q  359 aa 360  Q
    ||    
T  18934815 aa 18934816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 8323420 - 8323323
Alignment:
Q  277 ccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||||| |||| || |||||| ||||| ||| |||| |||||||| ||  |||||||||  |||||||||||||||||||| |||| |||||||||    
T  8323420 ccctgcaaatatatgctatttgaattttcgtccttgaagttactaattctttcattttgccattgcaaatattaatcatttgacttttggtcctaatt 8323323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 360
Target Start/End: Complemental strand, 22024232 - 22024151
Alignment:
Q  279 ctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| |||||| ||||||| ||||| || || || ||||||||||| ||| |||||| ||||||||||||||||||||||    
T  22024232 ctgcaaatataggtcatttgaattttcgtcacttaagttactaatccttccaatttgccactgcaaatattaatcatttgaa 22024151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 22533760 - 22533671
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||||| ||||||| ||||| |||| ||| ||||||||||| | || |||||  |||||||||||||||||||||    
T  22533760 tttcgtccctgcaaatataggtcatttgaattttcgtccccgaagttactaatccttcaatgttgccattgcaaatattaatcatttgaa 22533671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 364
Target Start/End: Complemental strand, 37945375 - 37945271
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| |||| || ||||| |||||||| |||||||||||  || | ||||| |||||||||||||||||||    
T  37945375 cttaaatatgtctttcgtccctgcaaatataggtcatt-gaattttcgtccctgaagttactaatcctttcaatctgcccttgcaaatattaatcatttg 37945277  T
Q  359 aatttt 364  Q
    | ||||    
T  37945276 actttt 37945271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 6421625 - 6421739
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||| | ||||||| ||||  ||| |||| ||||||||| |  || | ||||||| ||||||||||||||||||    
T  6421625 ttaaatatgtctttcgtccctgcaaatatatgtcatttgaatttttgtccttgaagttactaatcttttcaatctgcccctacaaatattaatcatttga 6421724  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  6421725 cttttggtcctaatt 6421739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 364
Target Start/End: Original strand, 18013641 - 18013719
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||||| ||||||| ||||| ||  |||| ||||||||||| ||| | |||||||||||||||||||||||||| ||||    
T  18013641 tataggtcatttgaattttcgtcagtgaagttactaatccttccaatatgcccctgcaaatattaatcatttgactttt 18013719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 360
Target Start/End: Complemental strand, 7015855 - 7015790
Alignment:
Q  295 tttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||| ||||| |||||||| ||||||||||| ||| | |||| ||||||||||||||||||||||    
T  7015855 tttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 7015790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 8323070 - 8323159
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||||  || |||||| ||||||| ||||| ||| |||| ||||||||||| ||||||||||  || | ||||||||||||||||    
T  8323070 tttcatccctataaatataggtcatttgaattttcgtccatgaagttactaatccttccattttgccattgaagatattaatcatttgaa 8323159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 31118969 - 31119019
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttacta 321  Q
    |||| ||||||||| |||||||||||||| |||||||||||||| ||||||    
T  31118969 tttcgtccctgcaaatataggccatttgaattttcatccctgaagttacta 31119019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 34404505 - 34404586
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| |||||| ||||||| ||||| || ||||| ||||||||||| ||| |||| |  |||||||||||||||||||||    
T  34404505 cctgcaaatataggtcatttgaattttcgtcactgaagttactaatccttcca-tttggcattgcaaatattaatcatttgaa 34404586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 6421829 - 6421882
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  6421829 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 16118321 - 16118232
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||||| |||| ||| ||||| ||||| ||||| ||  |||||||| | |||||| |||  |||||||||| ||||||||||    
T  16118321 tttcatccctgcaaatataagccgtttgaattttcgtccctaaagatactaatctttccatttcgccattgcaaatattcatcatttgaa 16118232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 18013789 - 18013736
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  18013789 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 18013736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 27753493 - 27753585
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||| ||||||||| |||||| |||| || ||||| ||| |||| ||||||||||| |||   |||| ||||||||||||||||||||| ||||    
T  27753493 tttcgtccctgcaaatataggtcatt-gaattttcgtccatgaagttactaatccttccaaactgccactgcaaatattaatcatttgactttt 27753585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 33735520 - 33735573
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  33735520 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 33735573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 18935078 - 18934991
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||||| || |||||| ||||||||||| | |||||||| ||||||||||| | | |||||| |||||||  |||||||||||| ||||    
T  18935078 tccctgtaaatataggtcatttgatttt-cgtccctgaaattactaatccttctaatttgccactgcaaaatttaatcatttgactttt 18934991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 374
Target Start/End: Complemental strand, 20705100 - 20704980
Alignment:
Q  255 aagacttaaatatgcatttcatccctgcaattata--ggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    ||||||||||||||  |||| |||||| || ||||  || ||||||| ||||| ||  |||| ||||||||| |  || | ||||| |||||||||||||    
T  20705100 aagacttaaatatgtctttcgtccctgtaaatatataggtcatttgaattttcgtctttgaagttactaatcttttcaatctgccc-tgcaaatattaat 20705002  T
Q  353 catttgaattttcgtcctaatt 374  Q
    ||||||| |||| |||||||||    
T  20705001 catttgacttttggtcctaatt 20704980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 360
Target Start/End: Complemental strand, 27753810 - 27753760
Alignment:
Q  310 ctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||| ||||||||||| ||| | |||| ||||||||||||||||||||||    
T  27753810 ctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 27753760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 41339708 - 41339634
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| ||||||| ||||| ||| | || ||||||||| | ||||||||||   ||||||||||||||||||||    
T  41339708 tataggtcatttgaattttcgtccataaagttactaatcattccattttgccatcgcaaatattaatcatttgaa 41339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 12990965 - 12990912
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||| |||| |||||||||    
T  12990965 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12990912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 13064586 - 13064533
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||| |||| |||||||||    
T  13064586 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 13064533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 18013981 - 18013889
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||| ||||||||| |||||||||||| | ||||| ||| |||| |||| ||||||  || | |||| |||||||||||||| |||||| ||||    
T  18013981 tttcgtccctgcaaatataggccatttaaattttcgtcc-tgaagttaccaatcctttcaatctgcctctgcaaatattaattatttgactttt 18013889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 25253263 - 25253210
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||| |||| |||||||||    
T  25253263 tttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 25253210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 32052431 - 32052484
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||||    
T  32052431 tttcatccctgcaaatatagttcatttgaattttcgtccctgaagttactaatc 32052484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 41339547 - 41339611
Alignment:
Q  257 gacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttacta 321  Q
    ||||||||||||  |||| ||||||||| |||||  ||||||| ||||| |||||||| ||||||    
T  41339547 gacttaaatatgtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttacta 41339611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 123; Significance: 5e-63; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 259 - 418
Target Start/End: Original strand, 261003 - 261162
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  261003 cttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccatgaatttactaatcctcccattttgcccctgcaaatattaatcatttg 261102  T
Q  359 aattttcgtcctaattnnnnnnntttgcttaggtggatggcaaagaccattttacccata 418  Q
    |||||||| |||||||       |||||||||||||||||||||||||||||||||||||    
T  261103 aattttcgacctaattaaaaaaatttgcttaggtggatggcaaagaccattttacccata 261162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 254 - 373
Target Start/End: Complemental strand, 262544 - 262425
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  262544 aaaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgaacttactaatcctcccatttttcccctgcaaatattaatc 262445  T
Q  354 atttgaattttcgtcctaat 373  Q
    |||| ||||||| |||||||    
T  262444 atttaaattttcatcctaat 262425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 260 - 418
Target Start/End: Original strand, 54590146 - 54590304
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||| || |||||||||| || ||||||||||||||||||    
T  54590146 ttaaatatgcatttcatccctgcaattataggtcatttgatttttcatctttgaacttactaattcttccattttgcctctacaaatattaatcatttga 54590245  T
Q  360 attttcgtcctaattnnnnnnntttgcttaggtggatggcaaagaccattttacccata 418  Q
    |||||||||||||||       |||||||||||||||||||||||||||||||||||||    
T  54590246 attttcgtcctaattaaaaaaatttgcttaggtggatggcaaagaccattttacccata 54590304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 54591676 - 54591560
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgc--aaatattaatcatt 356  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  54591676 cttaaatatgcatttcatccctgcaattatagatcatttgatttttcatccctgaacttactaaacctcccattttgcccctgcaaaaatattaatcatt 54591577  T
Q  357 tgaattttcgtcctaat 373  Q
    |||||||||||||||||    
T  54591576 tgaattttcgtcctaat 54591560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 53477178 - 53477064
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  53477178 cttaaatatgcatttcatctctgcaattataggtcatttgatttttcatctctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 53477079  T
Q  359 aattttcgtcctaat 373  Q
    || |||  |||||||    
T  53477078 aaatttgttcctaat 53477064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 23455792 - 23455677
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||| ||| |||||||    
T  23455792 aaaggcttaaatatgcatttcatccctgtaattataggtcatttgatttttcattcctgagcttactaatcctcccattttgccactgtaaaaattaatc 23455693  T
Q  354 atttgaattttcgtcc 369  Q
    |||| || ||||||||    
T  23455692 atttcaaatttcgtcc 23455677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 38982691 - 38982584
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||     
T  38982691 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 38982592  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  38982591 gttcgtcc 38982584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 350
Target Start/End: Original strand, 23454956 - 23455047
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatatta 350  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||| ||||    
T  23454956 cttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcatcccattttgcccctgtaaaaatta 23455047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 56556579 - 56556694
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| || || |||||    
T  56556579 aaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatc 56556678  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  56556679 atttgaaagttcgtcc 56556694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 38813556 - 38813666
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||| |||||    
T  38813556 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaataatttg 38813655  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  38813656 aaagttcgtcc 38813666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 38814430 - 38814315
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| |||||||| || |||| |||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||    
T  38814430 aaaggcttaaatatgcttttcatccttgtaattttaggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 38814331  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  38814330 atttgaaagttcgtcc 38814315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 52816526 - 52816411
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  ||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||| || || |||||    
T  52816526 aaaggcttaaatatgattttcatccctgtaattataggccgtttgatttttcatctctgaacttactaatccttccattttgcccctgtaattactaatc 52816427  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  52816426 atttgaaagttcgtcc 52816411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 56557423 - 56557313
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||    
T  56557423 cttaaatatgcttttcatccctctaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttg 56557324  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  56557323 aaagttcgtcc 56557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 52815659 - 52815775
Alignment:
Q  253 gaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    ||||| ||||||||||| ||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||  ||||||||||||| || || ||||    
T  52815659 gaaaggcttaaatatgcttttcatccctgtaattataggccgtttgattttttatccctgaacttactaatcctttcattttgcccctgtaattactaat 52815758  T
Q  353 catttgaattttcgtcc 369  Q
    || |||||  |||||||    
T  52815759 cacttgaaagttcgtcc 52815775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 53559774 - 53559654
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||||||||||||||||||    
T  53559774 aaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcgttccaatctgcccctgcaaatattaatc 53559675  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  53559674 atttgacttttggtcctaatt 53559654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 55013191 - 55013072
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| |||||||| || |||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||| || || |||||    
T  55013191 aaaggcttaaatatgcttttcatccatgtaattataggctatttgatttttcatcc-tgagcttactaatcctcccagtttgcccctgtaattactaatc 55013093  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||||  ||||||||||||    
T  55013092 atttgaaaattcgtcctaatt 55013072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 13336936 - 13336825
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||||||||||||||||| |  |||||||| | ||||||| |||    
T  13336936 cttaaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttactaatcctcccattctttccctgcaattgttaatcacttg 13336837  T
Q  359 aattttcgtcct 370  Q
    || ||| |||||    
T  13336836 aaatttggtcct 13336825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 22250115 - 22250000
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | |||||||||||||||||||||||||    
T  22250115 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttg 22250016  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  22250015 acttttagtcctaatt 22250000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 33294525 - 33294410
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||||| |||||| ||||| |||||||| ||||||||||| ||  | |||||||||||||||||||||||||    
T  33294525 cttaaatatgtctttcctccctgcaaatataggcaatttgaattttcgtccctgaagttactaatccttccgatctgcccctgcaaatattaatcatttg 33294426  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  33294425 atttttggtcctaatt 33294410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 9254411 - 9254522
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||  ||| |  |||||||| | ||||||| |||||     
T  9254411 aaatatgcatttcatccctgcaaatataggccatttgaaatttcatccttgaacttactaatcctcttattatttccctgcaattgttaatcacttgaaa 9254510  T
Q  362 tttcgtcctaat 373  Q
    ||| ||||||||    
T  9254511 tttggtcctaat 9254522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 47982018 - 47981903
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||| | |||||| ||||| || ||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  47982018 cttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 47981919  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  47981918 atttttggtcctaatt 47981903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 374
Target Start/End: Complemental strand, 12691786 - 12691672
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||  |||||||| ||||||||||| ||| |  |||||||||||||||||||||||||    
T  12691786 ttaaatatgtctttcgtccctgcaaatataggtcatttgaatttttgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttga 12691687  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  12691686 cttttggtcctaatt 12691672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 54961428 - 54961538
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  54961428 aaaggcttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatc 54961527  T
Q  354 atttgaatttt 364  Q
    |||||| ||||    
T  54961528 atttgactttt 54961538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 20086466 - 20086554
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||    
T  20086466 tataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcctaatt 20086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 22249730 - 22249850
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||||  ||||||| ||||| ||| |||| |||||||||||  || | ||||||||||||||||||||    
T  22249730 aaaggcttaaatatgtttttcgtccctgcaaatatagatcatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatc 22249829  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  22249830 atttgacttttggtcctaatt 22249850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 22882422 - 22882330
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatca 354  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||| ||||||||||||| |  |||||||| | |||||||    
T  22882422 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatca 22882330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 22934086 - 22933994
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatca 354  Q
    ||||||||||||||||||||||| |||||| |||||||  ||||||||||||||||| ||||||||||||| |  |||||||| | |||||||    
T  22934086 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctgaacttaataatcctcccattctttccctgcaattgttaatca 22933994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 47862507 - 47862419
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||||||||||| ||||| ||| |||| ||||||||||| | | |||||||||||||||||||||||||||| |||| |||||||||    
T  47862507 tataggccatttgaattttcgtccatgaagttactaatccttctaatttgcccctgcaaatattaatcatttgacttttggtcctaatt 47862419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 12691420 - 12691523
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||| ||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | || |||| |||||||||||||||||| |||| |||||    
T  12691420 tttcgtccatgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgtccctacaaatattaatcatttgacttttggtcct 12691519  T
Q  371 aatt 374  Q
    ||||    
T  12691520 aatt 12691523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 13872451 - 13872336
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||| | |||||| ||||  |||||||| |||||||| || ||| | |||||||||||||||||||||||||    
T  13872451 cttaaatatgtctttcgtccctgcaaatatagtctatttgaatttttgtccctgaagttactaattcttccaatctgcccctgcaaatattaatcatttg 13872352  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  13872351 acttttggtcctaatt 13872336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 47862166 - 47862269
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||||||||||||| |||| | ||||||| ||||| || ||||| ||||||||||| ||| | |||||||||||||| ||||||||||| |||| |||||    
T  47862166 tttcatccctgcaaatatatgtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatactaatcatttgactttttgtcct 47862265  T
Q  371 aatt 374  Q
    ||||    
T  47862266 aatt 47862269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 53475833 - 53475947
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||||||  ||||| ||||| |||||||| ||||||||||| || |||||||||||  ||  |||||| |||||||||||||||||||    
T  53475833 cttaaatatgtctttcatctttgcaaatatagaccatttgagttttcatccctaaagttactaatcctttcaaattgcccttgcaaatattaatcatttg 53475932  T
Q  359 aattttcgtcctaat 373  Q
    | |||| ||||||||    
T  53475933 agttttagtcctaat 53475947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 370
Target Start/End: Complemental strand, 8287303 - 8287204
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||| |||||||  |||||||||||| |||| |||||    
T  8287303 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgacttttggtcct 8287204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 19916670 - 19916773
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||| | |||||  ||||||| ||||||||||| ||| | |||| ||||||||||||||||||||| |||| |||||    
T  19916670 tttcgtccctgcaaatataggtcatttaaattttcgcccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcct 19916769  T
Q  371 aatt 374  Q
    ||||    
T  19916770 aatt 19916773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 8286946 - 8287035
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||| ||||||||| ||||| || ||||| ||| ||||||| ||||||||||  |||||||||||||||||||||    
T  8286946 tttcgtccctgcaaatataagccatttgaattttcgtctctgaagttaataatccttccattttgccattgcaaatattaatcatttgaa 8287035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 35731031 - 35730942
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||||| || |  |||||||||||||||||||||    
T  35731031 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattatgtcattgcaaatattaatcatttgaa 35730942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 37678218 - 37678129
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||| ||||||| | ||||| |||||||| ||||||||||| ||| | |||| ||||||||||||||||||||||    
T  37678218 tttcgtccctgcaaatataagccatttaaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgaa 37678129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 50246228 - 50246139
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | || | ||||||||||||||||||||||    
T  50246228 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgtcactgcaaatattaatcatttgaa 50246139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 257 - 374
Target Start/End: Complemental strand, 54961815 - 54961698
Alignment:
Q  257 gacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 356  Q
    ||||||||||||  |||| ||||||||| |||||| ||||||| ||||  |||||||| |||||||||||  || | |||||| | ||||||||||||||    
T  54961815 gacttaaatatgtctttcgtccctgcaaatataggtcatttgaattttagtccctgaagttactaatcctttcaatctgcccccgtaaatattaatcatt 54961716  T
Q  357 tgaattttcgtcctaatt 374  Q
    ||| ||||  ||||||||    
T  54961715 tgacttttgctcctaatt 54961698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 22881172 - 22881284
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| || ||||||||||||||  ||||||| ||| | ||||||||||||||||| |   ||| ||| | ||||||| |||||     
T  22881172 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22881271  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  22881272 tttggtcctaatt 22881284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 22932836 - 22932948
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| || ||||||||||||||  ||||||| ||| | ||||||||||||||||| |   ||| ||| | ||||||| |||||     
T  22932836 aaatatgcatttcatccctgtaaatataggccatttgaaatttcatctctgcatttactaatcctcccattcttttcctacaattgttaatcacttgaaa 22932935  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  22932936 tttggtcctaatt 22932948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 32846385 - 32846465
Alignment:
Q  280 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||| |||||||||||||| ||||| | |||||| ||| ||||||| ||||||||||  |||||||||||||||||||||    
T  32846385 tgcaaatataggccatttgaattttcgttcctgaagttattaatccttccattttgccattgcaaatattaatcatttgaa 32846465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 258 - 374
Target Start/End: Original strand, 47980686 - 47980802
Alignment:
Q  258 acttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||| |  |||| ||||||||| ||||| |||||||| ||||| |||||||| ||||| ||||| ||| | |  |||||||||||||||||||||    
T  47980686 acttaaataggtctttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactgatccttccaatctatccctgcaaatattaatcattt 47980785  T
Q  358 gaattttcgtcctaatt 374  Q
    || ||||  ||||||||    
T  47980786 gacttttgatcctaatt 47980802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 13872071 - 13872186
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||||  |||||| ||||| ||| |||| ||| ||||||| ||| | ||||| |||||||| ||||||||||    
T  13872071 cttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtccatgaagttattaatccttccaatatgcccttgcaaatactaatcatttg 13872170  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  13872171 acttttggtcctaatt 13872186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 50245871 - 50245974
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| |||||| || |||||| ||||||| ||||||||| |||| ||||||||| | ||| | |||| ||||||||||||||||||||| |||| ||| |    
T  50245871 tttcgtccctgtaaatataggtcatttgaattttcatccatgaagttactaatcattccaatctgccactgcaaatattaatcatttgacttttagtctt 50245970  T
Q  371 aatt 374  Q
    ||||    
T  50245971 aatt 50245974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 34238499 - 34238587
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| |||||| ||||| || ||||| |||||||||||  || | |||||||||||||||||||||||||| |||| ||| |||||    
T  34238499 tataggctatttgaattttcgtctctgaagttactaatcctttcaatatgcccctgcaaatattaatcatttgacttttggtcataatt 34238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 33294146 - 33294261
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||  ||| ||||| ||||||  |||||| ||||  ||| |||| ||||||||||| ||| ||||||||||||||||||||||||||     
T  33294146 cttaaatatgttttttgtccatgcaaatataggttatttgaatttttgtccatgaagttactaatccttccaatttgcccctgcaaatattaatcattta 33294245  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  33294246 acttttggtcataatt 33294261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 37677862 - 37677965
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||  | |||| |||||||  |||||||||||| |||| ||| |    
T  37677862 tttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccgatctgccactgcaaaatttaatcatttgacttttggtcat 37677961  T
Q  371 aatt 374  Q
    ||||    
T  37677962 aatt 37677965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 489539 - 489465
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||| ||||  ||||| |||| ||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  489539 tataggccgtttggattttcgtcccagaagttactaatccttccattttgccattgcaaatattaatcatttgaa 489465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 515331 - 515257
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||| ||||  ||||| |||| ||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  515331 tataggccgtttggattttcgtcccagaagttactaatccttccattttgccattgcaaatattaatcatttgaa 515257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 22249940 - 22249993
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  22249940 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 22249993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 26601424 - 26601343
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||||| ||| |||| ||||||||| | ||| | ||||| |||||||||||||||||||| |||| |||||||||    
T  26601424 catttgaattttcgtccatgaagttactaatcattccaatatgcccatgcaaatattaatcatttgacttttggtcctaatt 26601343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 374
Target Start/End: Original strand, 53559440 - 53559504
Alignment:
Q  310 ctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| ||| ||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||    
T  53559440 ctgaagttattaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatt 53559504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 360
Target Start/End: Original strand, 10128763 - 10128809
Alignment:
Q  314 acttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||    
T  10128763 acttactaatcctcccattttgccactacaattattaatcatttgaa 10128809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 12691583 - 12691530
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  12691583 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12691530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 324
Target Start/End: Complemental strand, 33294333 - 33294268
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||  |||||||||||||| |||||| ||||||| ||||| |||| ||| |||||||||    
T  33294333 cttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtcccggaagttactaatc 33294268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 47862329 - 47862276
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  47862329 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 47862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 53559564 - 53559511
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  53559564 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 53559511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 27813068 - 27813152
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||| |||| | ||||||| |||| |||| |||| ||||| ||||| |||||||| |  |||||||| ||||||||||||    
T  27813068 tccctgcaaatataagtcatttgaatttttatccatgaagttactgatccttccattttgtcattgcaaatactaatcatttgaa 27813152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 19917026 - 19916937
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||||| ||||| | ||||| ||  |||| ||||||||| |  || | |||| ||||||||||||||||||||||    
T  19917026 tttcgtccctgcaaatataggtcatttaaattttcgtctttgaagttactaatcatttcaatctgccactgcaaatattaatcatttgaa 19916937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 20086644 - 20086697
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| | ||||| ||||| |||||||| |||||||||    
T  20086644 tttcatccctgcaaatataggtcctttgaattttcgtccctgaagttactaatc 20086697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 34238647 - 34238594
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| | |||| ||||||| ||||| |||||||| |||||||||    
T  34238647 tttcatccctgcaaatttaggtcatttgaattttcgtccctgaagttactaatc 34238594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 35596480 - 35596520
Alignment:
Q  314 acttactaatcctcccattttgcccctgcaaatattaatca 354  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  35596480 acttaccaatcctcccaatttgccactgcaaatattaatca 35596520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 1e-51; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 38598966 - 38599081
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  38598966 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttg 38599065  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  38599066 aaaattcgtcctaatt 38599081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 25288174 - 25288059
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25288174 cttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttg 25288075  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| || ||||||    
T  25288074 acttttggttctaatt 25288059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 7393243 - 7393129
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7393243 cttaaatagacatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttg 7393144  T
Q  359 aattttcgtcctaat 373  Q
    || ||| ||||||||    
T  7393143 aaatttagtcctaat 7393129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 33497719 - 33497599
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||    
T  33497719 aaaggcttaaatatgcttttcatccctgtaattatagggcatttgatttttcatccatgagcttactaatcctcccattttgcccctgcaattactaatc 33497620  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||||  ||||||||||||    
T  33497619 atttgaaaattcgtcctaatt 33497599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 1231528 - 1231643
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||| ||| ||||||||||||    
T  1231528 cttaaatatgcatttcatccctacaattataggccctttgatttttcatccatgagcttactaatcctcccattttacccctgtaaaaattaatcatttg 1231627  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  1231628 aaaattcgtcctaatt 1231643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 4970130 - 4970242
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||||||  || |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||     
T  4970130 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttgaaa 4970229  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  4970230 tttagtcctaatt 4970242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 34213760 - 34213876
Alignment:
Q  253 gaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| |||  |||||    
T  34213760 gaaaggcttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaat 34213859  T
Q  353 catttgaattttcgtcc 369  Q
    ||||||||  |||||||    
T  34213860 catttgaaagttcgtcc 34213876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 34665772 - 34665882
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  34665772 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 34665871  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  34665872 aaagttcgtcc 34665882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 4463524 - 4463409
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||| |  |||||||| | ||||||| |||    
T  4463524 cttaaatatgcatttcatccctgcaagtataggccatttgaaatttcatccctgaacttactaatcctcctattctttccctgcaattgttaatcacttg 4463425  T
Q  359 aattttcgtcctaatt 374  Q
    || ||| |||||||||    
T  4463424 aaatttggtcctaatt 4463409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 34214627 - 34214516
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttca-tccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| || || |||||||||    
T  34214627 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcaatccctgaacttactaatccttccattttgcccctgtaattactaatcattt 34214528  T
Q  358 gaattttcgtcc 369  Q
    |||  |||||||    
T  34214527 gaaagttcgtcc 34214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 1232895 - 1232796
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    |||||||||||||||||||| ||| ||||||||||||    
T  1232895 cttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagctt--gtatcctcccattttgcccctgtaaaaattaatcatttg 1232798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 24377186 - 24377298
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||| | ||||||||  || |||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||     
T  24377186 aaatatgcatttcattcttgcaattaggggtcatttgaagtttcatccctgaacttactaatcctcccatttttcccctgcaaatattaagcatttcaaa 24377285  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  24377286 attcgtcctaatt 24377298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 36623740 - 36623620
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | ||||||||||||||||||||    
T  36623740 aaaggcttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatc 36623641  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  36623640 atttgacttttggtcctaatt 36623620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 43866713 - 43866828
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||| || ||| | |||||||||||||||||||||||||    
T  43866713 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcatttg 43866812  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  43866813 acttttggtcctaatt 43866828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 374
Target Start/End: Complemental strand, 24379089 - 24378979
Alignment:
Q  264 atatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattt 363  Q
    ||||||||||||||||||||||||  || |||||||| |||||||| |||||||||||||||||| ||||||||||||||||||  || ||||| ||  |    
T  24379089 atatgcatttcatccctgcaattaggggtcatttgatatttcatccttgaacttactaatcctcctattttgcccctgcaaataaaaagcattttaaaat 24378990  T
Q  364 tcgtcctaatt 374  Q
    |||||||||||    
T  24378989 tcgtcctaatt 24378979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 27437617 - 27437503
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||| ||||||||| |  ||||||||| |||||| || ||||||||||    
T  27437617 cttaaatatgcatttcatccctgcaaatataggccgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttg 27437518  T
Q  359 aattttcgtcctaat 373  Q
    || ||| ||||||||    
T  27437517 aaatttagtcctaat 27437503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 25287789 - 25287909
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| |||||| || ||| |||||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  25287789 aaaggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 25287888  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  25287889 atttgacttttggtcctaatt 25287909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 23424894 - 23424779
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| | ||||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | |||||||||||||||||||||||||    
T  23424894 cttaaatatgtctttcgttcctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaatattaatcatttg 23424795  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  23424794 atttttggtcctaatt 23424779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 27436565 - 27436680
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||||||| |||||| | ||||| ||||| |||||||| ||||||||| |  ||||||||| |||||| || ||||||||||    
T  27436565 cttaaatatgcatttcatccctgcaaatataggtcgtttgaattttcgtccctgaagttactaatcttttcattttgccactgcaattactaatcatttg 27436664  T
Q  359 aattttcgtcctaatt 374  Q
    || ||| |||||||||    
T  27436665 aaatttagtcctaatt 27436680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 29574747 - 29574858
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||  |||||||| | ||||||| |||||     
T  29574747 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 29574846  T
Q  362 tttcgtcctaat 373  Q
    ||| ||||||||    
T  29574847 tttggtcctaat 29574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 36623354 - 36623469
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||||  || | ||| |||||||||||||||||||||    
T  36623354 cttaaatatgtttttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgctcctgcaaatattaatcatttg 36623453  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  36623454 acttttggtcctaatt 36623469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 299 - 373
Target Start/End: Original strand, 7392250 - 7392324
Alignment:
Q  299 atttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaat 373  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||||||    
T  7392250 atttttcatccctgaacttactaatcctcccattttatccctgcaaatattaatcatttgaaatttagtcctaat 7392324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 260 - 374
Target Start/End: Complemental strand, 27857123 - 27857009
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||| | ||| | ||||| ||||||||||||||||||||    
T  27857123 ttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatcattccaatctgcccttgcaaatattaatcatttga 27857024  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  27857023 cttttggtcctaatt 27857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 36574822 - 36574932
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||| |||||  |||||| |||||||  |||||||||||||||||||||||||||||  |   ||||||||||||||||||||||| |    
T  36574822 aaatatgcatttcatctctgcatatatagggcatttgaaatttcatccctgaacttactaatcctcccaaatcttccctgcaaatattaatcatttgagt 36574921  T
Q  362 tttcgtcctaa 372  Q
    ||| |||||||    
T  36574922 tttggtcctaa 36574932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 37343167 - 37343049
Alignment:
Q  256 agacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcat 355  Q
    |||||||||||||  ||||  |||||||| |||||| ||||||| ||||| |||||||| |||||||| || ||| | ||||||||||||||||||||||    
T  37343167 agacttaaatatgtctttcgcccctgcaaatataggtcatttgaattttcgtccctgaaattactaattcttccaatatgcccctgcaaatattaatcat 37343068  T
Q  356 ttgaattttcgtcctaatt 374  Q
    |||| |||| |||||||||    
T  37343067 ttgacttttggtcctaatt 37343049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 374
Target Start/End: Original strand, 33497020 - 33497133
Alignment:
Q  261 taaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||  |||||| | || ||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||| ||||| || ||||||||||||    
T  33497020 taaatatgattttcattcatgtaattataggtcatttgatttttcattcttgaacttactaatccttccattttgcccttgcaattactaatcatttgaa 33497119  T
Q  361 ttttcgtcctaatt 374  Q
      ||||||||||||    
T  33497120 aattcgtcctaatt 33497133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 7763 - 7660
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||||||| ||||| ||| |||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| ||| |    
T  7763 tttcgtccctgcaaatataggccatttgaattttcgtccatgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcat 7664  T
Q  371 aatt 374  Q
    ||||    
T  7663 aatt 7660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 547433 - 547547
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| |||| ||||||||| |||||||||||| | ||||  |||||||| ||||||||||| ||| | ||||||||||||||||||||||||     
T  547433 cttaaatatgc-tttcgtccctgcaaatataggccatttaaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttc 547531  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  547532 acttttggtcctaatt 547547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 29190529 - 29190426
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| ||||| |||||||| |||| ||| ||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||    
T  29190529 tttcgtccctgcaaatatagaccatttgaatttttatctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttagtcct 29190430  T
Q  371 aatt 374  Q
    ||||    
T  29190429 aatt 29190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 34666635 - 34666529
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  ||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| || || ||||||||||||     
T  34666635 aaatatgtttttcatcgctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttg-ccctgtaattactaatcatttgaaa 34666537  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  34666536 gttcgtcc 34666529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 364
Target Start/End: Original strand, 41801816 - 41801923
Alignment:
Q  257 gacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 356  Q
    ||||||||||||  |||| ||||||||| |||||| ||||||| ||||| | |||||| ||||||||||| ||| | |||||||||||||||||||||||    
T  41801816 gacttaaatatgtttttcgtccctgcaaatataggtcatttgaattttcgttcctgaagttactaatccttccaatctgcccctgcaaatattaatcatt 41801915  T
Q  357 tgaatttt 364  Q
    ||| ||||    
T  41801916 tgactttt 41801923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 43867093 - 43866978
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||| |||||||| ||||| ||| |||| |||||||||||  || | |||||||||||||||||||||||||    
T  43867093 cttaaatatgtttttcgtccctgcaaatatagaccatttgaattttcgtccatgaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 43866994  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  43866993 acttttggtcctaatt 43866978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 20096394 - 20096288
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaata---ttaatcatttgaattttcgt 367  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||| ||||||||   ||||||||||||||||| ||    
T  20096394 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatatatttaatcatttgaattttggt 20096295  T
Q  368 cctaatt 374  Q
    |||||||    
T  20096294 cctaatt 20096288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 29575980 - 29575868
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||| ||||||||  |||||||||| || ||||||||||||||||| |  || ||||| | ||||||| |||||     
T  29575980 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttgaaa 29575881  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  29575880 tttggtcctaatt 29575868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 41182283 - 41182163
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||| | ||||||| ||||| |||||||| ||||||||| |  || | ||||||||||||||||||||    
T  41182283 aaaggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccctgaagttactaatcatttcaatctgcccctgcaaatattaatc 41182184  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  41182183 atttgacttttggtcctaatt 41182163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 20096034 - 20096137
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||| | ||||||| ||||  |||||||| ||||||||||| ||| |||||| ||||||||||||||||||||| |||| |||||    
T  20096034 tttcgtccctgcaaatatatgtcatttgaatttttgtccctgaagttactaatccttccaatttgcctctgcaaatattaatcatttgacttttggtcct 20096133  T
Q  371 aatt 374  Q
    ||||    
T  20096134 aatt 20096137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 40422530 - 40422441
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| | | | |||| ||||||||||||||||||||||    
T  40422530 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttcaaatctgccactgcaaatattaatcatttgaa 40422441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 11478142 - 11478262
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||| ||||||| ||||| ||| |||| |||||||||||  || | ||||||||||||||||||||    
T  11478142 aaaggcttaaataggtttttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatc 11478241  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| | |||||||    
T  11478242 atttgacttttggccctaatt 11478262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 11478500 - 11478412
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| ||||||||  |||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||    
T  11478500 tatagaccatttgaactttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgatttttggtcctaatt 11478412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 278 - 374
Target Start/End: Original strand, 40525528 - 40525624
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| |||| | ||||||| ||||| |||||||| ||||||||||| ||| | |||| ||||||||||||||||||||| |||| |||||||||    
T  40525528 cctgcaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcctaatt 40525624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 29190174 - 29190277
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||| ||| ||||| || ||||| ||||||||||| ||| | |  ||||||||||||||||||||||| |||| |||||    
T  29190174 tttcctccctgcaaatataggccatctgaattttcgtctctgaagttactaatccttccaatctatccctgcaaatattaatcatttgacttttggtcct 29190273  T
Q  371 aatt 374  Q
    ||||    
T  29190274 aatt 29190277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 40525872 - 40525774
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| || ||||||  |||||| ||||| |||||||| ||||||||| | ||| | |||||||||||||||||||||||||| |||| |||||||||    
T  40525872 tccctgtaaatataggttatttgaattttcgtccctgaaattactaatcattccaatctgcccctgcaaatattaatcatttgacttttggtcctaatt 40525774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 9632351 - 9632431
Alignment:
Q  280 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||| |||||| ||||||| ||||| |||||||| ||||||||||| |||||||| |  |||||||||||||||||||||    
T  9632351 tgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaa 9632431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 547805 - 547702
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||  ||||||| ||||| ||||| || ||||||||||| ||| | |||| || |||||||||||||||||| |||| |||||    
T  547805 tttcgtccctgcaaatatagatcatttgaattttcgtccctaaagttactaatccttccaatctgccactacaaatattaatcatttgacttttggtcct 547706  T
Q  371 aatt 374  Q
    ||||    
T  547705 aatt 547702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 23424526 - 23424629
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    ||||||||||| || |||||| ||||||| ||||  |||||||| |||||||| ||  || | |||||||||||||||||||||||||| ||||  ||||    
T  23424526 tttcatccctgtaaatataggtcatttgaatttttgtccctgaagttactaattctaacaatctgcccctgcaaatattaatcatttgacttttgatcct 23424625  T
Q  371 aatt 374  Q
    ||||    
T  23424626 aatt 23424629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 37342796 - 37342899
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| || || |||||||| ||||| | |||||| |||||||||||  || |  ||||||||||||||||||||||||| |||| |||||    
T  37342796 tttcgtccctgcaaatacagaccatttgaattttcgttcctgaagttactaatcctttcaatccgcccctgcaaatattaatcatttgacttttggtcct 37342895  T
Q  371 aatt 374  Q
    ||||    
T  37342896 aatt 37342899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 40422174 - 40422277
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||| ||| ||||| || ||||| | ||||||||| ||| | |||| ||||||||||||||||||||| |||| |||||    
T  40422174 tttcgtccctgcaaatataggtcatatgaattttcgtctctgaagtaactaatccttccaatctgccactgcaaatattaatcatttgacttttggtcct 40422273  T
Q  371 aatt 374  Q
    ||||    
T  40422274 aatt 40422277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 7396 - 7510
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| |||||||| || |||   || |||| ||||||||||||||||||    
T  7396 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcttccctgaagttactaattcttccaacatgtccctacaaatattaatcatttga 7495  T
Q  360 attttcgtcctaatt 374  Q
     |||| ||| |||||    
T  7496 cttttggtcataatt 7510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 26740100 - 26739984
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttg-cccctgcaaatattaatcattt 357  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| ||| |||| |||||||||||  || | || ||||| ||||||||||||||||    
T  26740100 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttgcaatctgccccctacaaatattaatcattt 26740001  T
Q  358 gaattttcgtcctaatt 374  Q
    || |||| || ||||||    
T  26740000 gacttttggttctaatt 26739984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 257 - 357
Target Start/End: Complemental strand, 31690279 - 31690180
Alignment:
Q  257 gacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatt 356  Q
    |||||||||||| ||||| |||||| || |||||| |||| || ||||| |||||||| ||||||||| | ||| | |||| ||||||||||||||||||    
T  31690279 gacttaaatatgtatttcgtccctgtaaatataggtcatt-gaattttcgtccctgaagttactaatcattccaatctgccactgcaaatattaatcatt 31690181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 329
Target Start/End: Complemental strand, 36576096 - 36576029
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctccc 329  Q
    ||||||| |||||||||||| || |||| |||||||||  |||||||||||||||||| |||||||||    
T  36576096 aaatatgtatttcatccctgtaaatataagccatttgaaatttcatccctgaacttaccaatcctccc 36576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 41251137 - 41251240
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| || |||| ||||| || ||||| ||||||||||| ||| | || |||| |||||||||||||||||| |||| ||| |    
T  41251137 tttcgtccctgcaaatataggtcaattgaattttcgtctctgaagttactaatccttccaatatgtccctacaaatattaatcatttgacttttggtcat 41251236  T
Q  371 aatt 374  Q
    ||||    
T  41251237 aatt 41251240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 38600332 - 38600218
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||| ||||||| ||||||||| |||||| |||||||  |||| |||||||| |||||||||||  ||    ||| |||||||  |||||||||||    
T  38600332 cttaaataggcatttcgtccctgcaaatataggtcatttgaaatttcgtccctgaagttactaatcctttcaaacagccactgcaaaatttaatcatttg 38600233  T
Q  359 aattttcgtcctaat 373  Q
    | |||| ||||||||    
T  38600232 agttttggtcctaat 38600218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Original strand, 26739753 - 26739834
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||||| |||||||| |||||||||||  || | || |||||||||||||||||||||||  ||| |||||||||    
T  26739753 catttgaattttcgtccctgaaattactaatcctttcaatatgtccctgcaaatattaatcatttgacgtttggtcctaatt 26739834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 36623560 - 36623613
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  36623560 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 36623613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 37342989 - 37343042
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  37342989 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 37343042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 43866888 - 43866835
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  43866888 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 43866835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 374
Target Start/End: Original strand, 27856787 - 27856859
Alignment:
Q  302 tttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||| |||||||| ||||||||||| ||| |  ||||||||||||||||||||||||| |||| ||| |||||    
T  27856787 tttcgtccctgaagttactaatccttccaatccgcccctgcaaatattaatcatttgacttttggtcttaatt 27856859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 31689914 - 31689998
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||| ||||| |||||||| ||||| ||| |||| |||| |||||| ||| | |||| |||||||| |||||||||||||    
T  31689914 tccctgcaaatatagaccatttgaattttcgtccatgaagttaccaatccttccaatatgccactgcaaatgttaatcatttgaa 31689998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 35163511 - 35163614
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||||||||||||| |||| ||||||||| ||||| ||| |||| ||||| |||||  || | |||| |||||||  |||||||||||| |||| ||| |    
T  35163511 tttcatccctgcaaatataagccatttgaattttcgtccttgaagttactgatcctttcaatctgccactgcaaaatttaatcatttgacttttggtcat 35163610  T
Q  371 aatt 374  Q
    ||||    
T  35163611 aatt 35163614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 354
Target Start/End: Original strand, 41767663 - 41767710
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatca 354  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  41767663 tccctgtacttactaatcctcccaatttgccactgcaaatattaatca 41767710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 41773664 - 41773617
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatca 354  Q
    |||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  41773664 tccctgtacttactaatcctcccaatttgccactgcaaatattaatca 41773617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 15716259 - 15716157
Alignment:
Q  258 acttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||| |  |||| ||| ||||| |||| | ||||| | ||||| |||||||| ||||||||||| | ||||||||  | ||||||||||||||||    
T  15716259 acttaaataggtctttcgtccatgcaaatatatgtcatttaaattttcgtccctgaagttactaatccttctattttgccattacaaatattaatcattt 15716160  T
Q  358 gaa 360  Q
    |||    
T  15716159 gaa 15716157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 364
Target Start/End: Original strand, 38619819 - 38619905
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    ||||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| | |||| |||||||  |||||||||||| ||||    
T  38619819 cctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttgactttt 38619905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 41802156 - 41802098
Alignment:
Q  301 ttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    ||||||||| |||| ||||||||| | ||| |||||||||||||||||| |||||||||    
T  41802156 ttttcatccttgaagttactaatcattccaatttgcccctgcaaatatttatcatttga 41802098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 547642 - 547695
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||||||||||||| ||||||| ||||| ||| |||| |||||||||    
T  547642 tttcatccctgcaattataggtcatttgaattttcgtccttgaagttactaatc 547695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 299
Target Start/End: Original strand, 4462144 - 4462181
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttga 299  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  4462144 aaatatgcatttcatccctgcaaatataggccatttga 4462181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 22763597 - 22763698
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||| | ||||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||| | | | | | || || |||||||||||||||||    
T  22763597 cttaaataggtatttcgtccttgcaaatataggtcatttgaattttcgtccctgaagttactaatctttctaatctaccactacaaatattaatcatttg 22763696  T
Q  359 aa 360  Q
    ||    
T  22763697 aa 22763698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 25287969 - 25287916
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  25287969 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 25287916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 314
Target Start/End: Original strand, 41802010 - 41802066
Alignment:
Q  258 acttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaa 314  Q
    ||||||||| |  |||||||||||||| |||||||||||||| ||||| ||||||||    
T  41802010 acttaaataggtctttcatccctgcaaatataggccatttgaattttcgtccctgaa 41802066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 41251496 - 41251393
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| ||||  |||||||| ||| | ||| |||| ||||||||| |  || | | |||||||||||||||||||||||| |||| ||| |    
T  41251496 tttcgtccctgcaaatataaaccatttgaatttccgtccatgaagttactaatcatttcaatctacccctgcaaatattaatcatttgacttttggtcat 41251397  T
Q  371 aatt 374  Q
    ||||    
T  41251396 aatt 41251393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 373
Target Start/End: Original strand, 4462179 - 4462241
Alignment:
Q  311 tgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaat 373  Q
    |||||||||||||||||||||| |  |||||||| | ||||||| ||||| ||| ||||||||    
T  4462179 tgaacttactaatcctcccattctttccctgcaattgttaatcacttgaaatttggtcctaat 4462241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 7588 - 7653
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||| || ||||||||||| || |||||| ||||||| ||||| |||||||| | |||||||    
T  7588 cttaaataggcctttcatccctgtaaatataggtcatttgaattttcgtccctgaagtcactaatc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 11478322 - 11478269
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| || ||||| |||||||||    
T  11478322 tttcatccctgcaaatataggtcatttgaattttcgtcgctgaagttactaatc 11478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 13566424 - 13566513
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| || ||  ||||||| ||||  || ||||| ||| | ||||| ||||||||||  |||||||||||||||||||||    
T  13566424 tttcgtccctgcaaatacagtacatttgaatttttgtctctgaagttattgatccttccattttgccattgcaaatattaatcatttgaa 13566513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 23424689 - 23424636
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||||    
T  23424689 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaatc 23424636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 29190366 - 29190419
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||||| || |||||||||    
T  29190366 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 29190419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 40525684 - 40525631
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||| || |||||| ||||||| ||||| |||||||| |||||||||    
T  40525684 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 40525631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 23514080 - 23514124
Alignment:
Q  316 ttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||  |||||||||  |||||||||||||||||||||    
T  23514080 ttactaatcctttcattttgccattgcaaatattaatcatttgaa 23514124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 360
Target Start/End: Original strand, 24529729 - 24529781
Alignment:
Q  308 ccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| ||||||||||| ||| | ||||  |||||||||||||||||||||    
T  24529729 ccctgaagttactaatccttccaatgtgccagtgcaaatattaatcatttgaa 24529781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 1e-51; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 254 - 418
Target Start/End: Original strand, 2828190 - 2828354
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||||||||| | |||||||||||||| | |||||||| |||||||||||||||    
T  2828190 aaaggcttaaatatgcatttcatccttgcaattatagatcatttgatttttcatccataaacttactaatccttctattttgcctctgcaaatattaatc 2828289  T
Q  354 atttgaattttcgtcctaattnnnnnnntttgcttaggtggatggcaaagaccattttacccata 418  Q
    ||||||||||||||| |||||       |||||||||||||||||||||||||||||||||||||    
T  2828290 atttgaattttcgtcttaattaaaaaaatttgcttaggtggatggcaaagaccattttacccata 2828354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 32619389 - 32619501
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||     
T  32619389 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 32619488  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  32619489 attcgtcctaatt 32619501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 6345732 - 6345620
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||||||  || |||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||     
T  6345732 aaatatgcatttcatccctgcaattaggggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaagcatttaaaa 6345633  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  6345632 tttagtcctaatt 6345620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 2829644 - 2829523
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgat-------ttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaa 351  Q
    |||||||||||||||||||||| |||||||||| ||||||||       ||||||||| ||| |||||||||||||||||||| ||||||||||||||||    
T  2829644 cttaaatatgcatttcatccctacaattataggtcatttgatatttgatttttcatccttgagcttactaatcctcccattttacccctgcaaatattaa 2829545  T
Q  352 tcatttgaattttcgtcctaat 373  Q
    ||||||||||||||||| ||||    
T  2829544 tcatttgaattttcgtcataat 2829523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 46282888 - 46282781
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||     
T  46282888 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 46282789  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  46282788 gttcgtcc 46282781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 51935297 - 51935182
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| |||||||| || ||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||||||    
T  51935297 cttaaatatgcttttcatccatgtaattatatgtcatttgatttttcatccctgagctttctaatcctcccattttgcccctgcaattactaatcatttg 51935198  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  51935197 aaaattcgtcctaatt 51935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 32238704 - 32238816
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||| |||| |||| ||||| ||     
T  32238704 aaatatgcatttcatccctgcaaatataggctatttgaaatttcatccctgaacttactaatcctcccattttgcctctgtaaatgttaagcatttcaaa 32238803  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  32238804 attcgtcctaatt 32238816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 50063043 - 50062936
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| || || ||||||||||||     
T  50063043 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcctctgtaattactaatcatttgaaa 50062944  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  50062943 gttcgtcc 50062936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 46282073 - 46282183
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  46282073 cttaaatatgtttttcatccctgtaattataggtcgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 46282172  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  46282173 aaagttcgtcc 46282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 49093043 - 49093153
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||| |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || || || ||||||||||    
T  49093043 cttaaacatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccatgtaattactaatcatttg 49093142  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  49093143 aaagttcgtcc 49093153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 260 - 357
Target Start/End: Original strand, 25064936 - 25065033
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||| || ||||  ||| |||||||||||    
T  25064936 ttaaatatgcatttcatccctgcaattataggtaatttgatttttcatccctgatcttactaatcctcccattctgtccctataaaaattaatcattt 25065033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 260 - 357
Target Start/End: Complemental strand, 25066055 - 25065958
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||||||||||||||||||  ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||| |||||||||||    
T  25066055 ttaaatatgcatttcatccctataattataagccatttgatttttcatccctgagcttactaatccttccattttacccctgtaaaaattaatcattt 25065958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 6344260 - 6344372
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| |||||  || |||||||  |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||     
T  6344260 aaatatgcatttcatccctgtaattaggggtcatttgaaatttcatccatgaacttactaatcctcccattttgcccttgcaaatattaaacatttgaaa 6344359  T
Q  362 tttcgtcctaatt 374  Q
    ||| ||| |||||    
T  6344360 tttggtcataatt 6344372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 32622451 - 32622339
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  ||||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| || || |||| |||||||     
T  32622451 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaataatttgaaa 32622352  T
Q  362 tttcgtcctaatt 374  Q
     |||||| |||||    
T  32622351 attcgtcataatt 32622339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 2953846 - 2953731
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  2953846 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 2953747  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  2953746 atttttggtcctaatt 2953731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 5183871 - 5183773
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||| |||||||||||||| ||||| |||||||| |||| |||||| ||| |||||||||||||||||||||||||||| |||| |||||||||    
T  5183871 tccctgcaaatataggccatttgaattttcgtccctgaagttacgaatccttccaatttgcccctgcaaatattaatcatttgacttttggtcctaatt 5183773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 13295137 - 13295235
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||| |||||| |||||||||||| ||||||||||| || ||| |||||||||||    
T  13295137 cttaaatatgcatttcacccctgtaattataggtcatttgatttttcacccctgagcttactaatccttccattttgcccttgtaaaaattaatcattt 13295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 52563656 - 52563768
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||||  |||||   |||||||| |||  |||||||||||||||||||||| |||||||||||||||| |||| |    
T  52563656 aaatatgcatttcatccctgcaaatatagggtatttggaatttcatccttgaggttactaatcctcccattttgccactgcaaatattaatcacttgagt 52563755  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  52563756 tttggtcctaatt 52563768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 1047586 - 1047471
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| || |||||| ||||||| ||||| || ||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  1047586 cttaaatatgtctttcatccctgtaaatataggtcatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 1047487  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  1047486 acttttggtcctaatt 1047471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 19755775 - 19755672
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| |||| ||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||    
T  19755775 tttcgtccctgcaaatataggtcatttgaatttttatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcct 19755676  T
Q  371 aatt 374  Q
    ||||    
T  19755675 aatt 19755672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 25414846 - 25414961
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||| ||| |||||||||||||| ||||| || ||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  25414846 cttaaatatgtctttcgtccctacaaatataggccatttgaattttcttctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 25414945  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  25414946 acttttggtcctaatt 25414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 37152920 - 37152805
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||| |||||||| ||||| || ||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  37152920 cttaaatatgtctttcgtccctgcaaatatagtccatttgaattttcgtctctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 37152821  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  37152820 acttttagtcctaatt 37152805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 46850028 - 46849925
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||| ||||| ||| |||||||||||||||||||||||||||| |||| |||||    
T  46850028 tttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatttgcccctgcaaatattaatcatttgacttttggtcct 46849929  T
Q  371 aatt 374  Q
    ||||    
T  46849928 aatt 46849925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 49002879 - 49002993
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||||||||||||||||||||||||    
T  49002879 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 49002978  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  49002979 cttttggtcctaatt 49002993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 739216 - 739336
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| ||||| |||||||| ||||| ||| |||| ||||||||||| ||| | ||||||||||||||||||||    
T  739216 aaaggcttaaataggtttttcgtccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttccaatatgcccctgcaaatattaatc 739315  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  739316 atttgacttttggtcctaatt 739336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 1040300 - 1040415
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| ||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  1040300 cttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 1040399  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  1040400 acttttggtcctaatt 1040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 1047206 - 1047321
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| ||||| |||| ||||||||| ||||  |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  1047206 cttaaatatgtctttcgtccttgcaaatataagccatttgaatttttgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 1047305  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  1047306 acttttggtcctaatt 1047321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 28534894 - 28534780
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatatt-aatcattt 357  Q
    |||||||||||||||| | | || || |||||| |||||||  ||||||||||||||||||||||||| ||||||| || ||||||||||| ||||||||    
T  28534894 cttaaatatgcatttcgttc-tgtaaatatagggcatttgaaatttcatccctgaacttactaatccttccattttacctctgcaaatattaaatcattt 28534796  T
Q  358 gaattttcgtcctaat 373  Q
    |||||||| |||||||    
T  28534795 gaattttcatcctaat 28534780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 29043137 - 29043022
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| || |||||| |||||||||||||| ||||| |||||||| |||||||||||  || | |||||||||||||||||||||||||    
T  29043137 cttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 29043038  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  29043037 acttttgatcctaatt 29043022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 13295678 - 13295608
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctccc 329  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||| ||||||    
T  13295678 cttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaaccctccc 13295608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 29980999 - 29980905
Alignment:
Q  280 tgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| |||||| ||||||| ||||| |||| ||| ||||||||||| ||| |||||||||||||||||||||||||||| |||| |||||||||    
T  29980999 tgcaaatataggtcatttgaattttcgtcccggaagttactaatccttccaatttgcccctgcaaatattaatcatttgatttttggtcctaatt 29980905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 5926524 - 5926636
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||| ||||||||||||| |    
T  5926524 aaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaacattaatcatttgact 5926623  T
Q  362 tttcgtcctaatt 374  Q
    ||| ||| |||||    
T  5926624 tttggtcttaatt 5926636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 5926891 - 5926788
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||| ||||||||||  ||| | |||| ||||||||| ||||||||||| |||| |||||    
T  5926891 tttcgtccctgcaaatatagaccatttgaattttcatccctgaagttactaatccgtccaatctgcctctgcaaatagtaatcatttgacttttggtcct 5926792  T
Q  371 aatt 374  Q
    ||||    
T  5926791 aatt 5926788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 6056378 - 6056493
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| ||||| || ||||| ||||| ||| | || ||||||||||||||||||||||    
T  6056378 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctaaaattactgatccttccaatatgtccctgcaaatattaatcatttg 6056477  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  6056478 acttttggtcctaatt 6056493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 26953103 - 26953218
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| ||||| ||||| | |||||| ||||| |||||||| |||||||||||  || | |||||||||||||||||||||||||    
T  26953103 cttaaatatgtctttcgtccttgcaaatatagactatttgaattttcgtccctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 26953202  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  26953203 acttttggtcctaatt 26953218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 33347786 - 33347683
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||| |||||||||||||||||||| |||| |||||    
T  33347786 tttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccttgcaaatattaatcatttgacttttggtcct 33347687  T
Q  371 aatt 374  Q
    ||||    
T  33347686 aatt 33347683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 49003245 - 49003142
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | |||| ||||||||||||||||||||| |||| |||||    
T  49003245 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcctctgcaaatattaatcatttgatttttggtcct 49003146  T
Q  371 aatt 374  Q
    ||||    
T  49003145 aatt 49003142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 10019728 - 10019654
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| ||||||| |||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  10019728 tataggtcatttgaattttcatccctgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 10019654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 24701656 - 24701550
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||||||||||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||||||||||  | |||||||||| |    
T  24701656 aaaggcttaaataggtctttcatccctgcaaatataagccatttgaattttcgtccctgaagttactaatccttccattttgccattacaaatattaacc 24701557  T
Q  354 atttgaa 360  Q
    |||||||    
T  24701556 atttgaa 24701550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 369
Target Start/End: Complemental strand, 49093875 - 49093801
Alignment:
Q  295 tttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||  |||||||    
T  49093875 tttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 49093801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 359
Target Start/End: Complemental strand, 6056761 - 6056660
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctg-aacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||  |||| ||||||||| |||| ||||||||| |||||||||||| || |||||||||||  || | ||||||||||||||||||||||||    
T  6056761 cttaaatatgtctttcgtccctgcaaatataagccatttgaattttcatccctgtaagttactaatcctttcaatctgcccctgcaaatattaatcattt 6056662  T
Q  358 ga 359  Q
    ||    
T  6056661 ga 6056660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 360
Target Start/End: Complemental strand, 46545097 - 46545012
Alignment:
Q  275 atccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| || |||||| |||||||  |||| |||||||| ||||||||||| |||||||||| ||||||||||||||||||||||    
T  46545097 atccctgtaaatataggtcatttgaagtttcgtccctgaagttactaatccttccattttgccactgcaaatattaatcatttgaa 46545012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 2953466 - 2953581
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||| ||||||| ||||| ||||| || |||||||||||  || | |||||||||||||||||||||||||    
T  2953466 cttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctaaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 2953565  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  2953566 acttttggtcataatt 2953581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 5183508 - 5183623
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| | |||| || |||||| ||||||| ||||| ||| | || ||||||||||| ||| | |||||||||||||||||||||||||    
T  5183508 cttaaatatgtctttcgttcctgaaaatataggtcatttgaattttcgtccataaagttactaatccttccaatctgcccctgcaaatattaatcatttg 5183607  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  5183608 acttttggtcctaatt 5183623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 26953483 - 26953368
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||  ||||| ||||||||| ||||  |||||||| ||||||| |||||| |||||||| || ||| | ||| | |||||||||||||||||||    
T  26953483 cttaaatatatatttcgtccctgcaaatataaaccatttgaattttcattcctgaagttactaattcttccaatctgctcttgcaaatattaatcatttg 26953384  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  26953383 acttttggtcctaatt 26953368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 33347418 - 33347533
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||| | |||||||  |||| |||||||| |||||||| || ||| | ||||||| |||||||||||||||||    
T  33347418 cttaaatatgtctttcgtccctgcaaatataagtcatttgaactttcgtccctgaagttactaattcttccaatctgcccctacaaatattaatcatttg 33347517  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  33347518 acttttggtcctaatt 33347533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 52565046 - 52564934
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||| |||||||||||| |||||| | |||||  |||| ||||| |  |||||||| || |||||||||| || ||||||||||||| |||| |    
T  52565046 aaatatgcatgtcatccctgcaaatatagggcgtttgaaatttcttccctaagattactaattcttccattttgccactacaaatattaatcacttgagt 52564947  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  52564946 tttggtcctaatt 52564934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 12577382 - 12577279
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||| | ||||| | ||||| ||| |||| |||||||||||  || | |||||||||||||||||||||||||| |||| |||||    
T  12577382 tttcgtccctgcaaatataagtcatttaaattttcgtccttgaagttactaatcctttcaatctgcccctgcaaatattaatcatttgacttttggtcct 12577283  T
Q  371 aatt 374  Q
    ||||    
T  12577282 aatt 12577279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 29980642 - 29980756
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||| || || |||||| ||||||| |||||  || |||| ||||||||| | ||| | ||||||||||||||||||||||||||    
T  29980642 ttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgcccatgaagttactaatctttccaatctgcccctgcaaatattaatcatttga 29980741  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  29980742 cttttggtcctaatt 29980756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 364
Target Start/End: Original strand, 12577012 - 12577117
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||||||||||| ||||| ||  |||| ||||||||| |  || | |||||||||||||||||||||||||    
T  12577012 cttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtctatgaagttactaatcatttcaatctgcccctgcaaatattaatcatttg 12577111  T
Q  359 aatttt 364  Q
    | ||||    
T  12577112 actttt 12577117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 300 - 369
Target Start/End: Original strand, 50062246 - 50062315
Alignment:
Q  300 tttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    ||||||||||||||||||||||||||| ||||||||| |||| || || ||||||||||||  |||||||    
T  50062246 tttttcatccctgaacttactaatccttccattttgctcctgtaattactaatcatttgaaagttcgtcc 50062315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 29042784 - 29042872
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||||||||||||||||| || | ||| ||| ||||||| ||| | || ||||||||||||||||||||||| |||| ||| |||||    
T  29042784 tataggccatttgatttttcgtcgcggaagttattaatccttccaatctgtccctgcaaatattaatcatttgatttttggtcataatt 29042872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 33030353 - 33030437
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||| |||||| ||||||| ||||| |||||||| |||||||| || ||| | |||| |||||||||| |||||||||||    
T  33030353 tccctgcaaatataggtcatttgaattttcgtccctgaagttactaattcttccaatctgccactgcaaatatgaatcatttgaa 33030437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 254 - 325
Target Start/End: Original strand, 36380181 - 36380253
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcat-ccctgaacttactaatcc 325  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||  |||| | |||| |||||||||||||    
T  36380181 aaagacttaaatatgcatttcatccctgcaaatataggcaatttgaaatttcttccccttaacttactaatcc 36380253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 739600 - 739485
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| || |||||| |||||| ||||||| ||||| | | |||| |||||||||||  || | || ||||||||||||||||||||||    
T  739600 cttaaatatgattttcgtctctgcaaatataggtcatttgaattttcgtacatgaagttactaatcctttcaatctgtccctgcaaatattaatcatttg 739501  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  739500 acttttgatcctaatt 739485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 25415214 - 25415111
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||| | ||||||| ||||| | |||||| ||||||||||| ||| | ||  |||||||||||||| ||||||| |||| |||||    
T  25415214 tttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatccttccaatatgttcctgcaaatattaaccatttgacttttggtcct 25415115  T
Q  371 aatt 374  Q
    ||||    
T  25415114 aatt 25415111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 373
Target Start/End: Complemental strand, 36381517 - 36381406
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||| ||||||||||||||| ||||||| ||||||  ||| |||| |||||||||||||||||| ||| |  |||| ||| | ||||||| |||||     
T  36381517 aaatatgtatttcatccctgcaaatataggctatttgaaattttatccttgaacttactaatcctcctattctttccctacaattgttaatcacttgaaa 36381418  T
Q  362 tttcgtcctaat 373  Q
    ||| ||| ||||    
T  36381417 tttggtcataat 36381406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 37152552 - 37152655
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||| ||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||| |||||||| ||||||||||| ||||  ||||    
T  37152552 tttcgtccctacaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgcccgtgcaaatactaatcatttgacttttgatcct 37152651  T
Q  371 aatt 374  Q
    ||||    
T  37152652 aatt 37152655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 374
Target Start/End: Complemental strand, 46364939 - 46364842
Alignment:
Q  277 ccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||||| |||| |  |||||| ||||| ||| |||| |||||||||||  || | |||||||||||||||||||||||||| ||||  ||||||||    
T  46364939 ccctgcaaatataagttatttgaattttcgtccttgaaattactaatcctttcaatatgcccctgcaaatattaatcatttgacttttgatcctaatt 46364842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 24701267 - 24701387
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| || |||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| | |||| |||||||  ||||||    
T  24701267 aaaggcttaaataagtctttcgtctctgcaaatatagctcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaatc 24701366  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||| | |||| |||||||||    
T  24701367 atttaacttttggtcctaatt 24701387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 33030698 - 33030602
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| |||||  ||||||| ||||| ||| |||| |||||||||||  || | |||| ||||||||||||||||||||| |||| || ||||||    
T  33030698 cctgcaaatatagatcatttgaattttcgtccatgaaattactaatcctttcaatctgccactgcaaatattaatcatttgacttttggttctaatt 33030602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 8890214 - 8890328
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||| | ||||| ||||||||| |||||| ||||||| | ||  |||||||| ||||||||| | ||| | |||| || |||||||||||||||||    
T  8890214 cttaaataggtatttcgtccctgcaaatataggtcatttgaatattg-tccctgaagttactaatctttccaatctgccactccaaatattaatcatttg 8890312  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  8890313 acttttggtcgtaatt 8890328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 6056553 - 6056500
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  6056553 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 6056500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 12577219 - 12577272
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  12577219 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 12577272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 29042932 - 29042879
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||| |||||||||    
T  29042932 tttcatccttgcaaatataggtcatttgaattttcatccctgaagttactaatc 29042879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 46364782 - 46364835
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  46364782 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 46364835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 6334670 - 6334757
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||| ||||| |||||||| ||||| |   | || ||||||||||| ||  | |||| ||||||||||||||||||||    
T  6334670 tttcatccctgcaaatatagaccatttgaattttcgttgttaaagttactaatccttccgatctgccactgcaaatattaatcatttg 6334757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 37152469 - 37152540
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    ||||||| ||||| ||| |||| ||||||||||| ||| | ||||| |||||||| ||||||||||| ||||    
T  37152469 catttgaattttcgtccatgaagttactaatccttccaatatgcccttgcaaatactaatcatttgactttt 37152540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 49990178 - 49990063
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||| | |||||| ||||| ||  |||| ||| ||||||| | | | | ||||| |||||||||||||||||    
T  49990178 cttaaatatgtctttcgtccctgcaaatatagactatttgaattttcgtctttgaagttattaatccttcaaatctacccctacaaatattaatcatttg 49990079  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  49990078 acttttggtcttaatt 49990063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 1040476 - 1040422
Alignment:
Q  270 atttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||| ||| |||||| ||||||| ||||| |||||||| |||||||||    
T  1040476 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 1047382 - 1047328
Alignment:
Q  270 atttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||| ||| |||||| ||||||| ||||| |||||||| |||||||||    
T  1047382 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 1047328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 360
Target Start/End: Complemental strand, 8890596 - 8890490
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||| ||||||| | ||| ||| |||| | ||||||| | ||| | || | |||||||||||||||    
T  8890596 aaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaatattcgtccatgaagtgactaatcattccaatatgtcactgcaaatattaatc 8890497  T
Q  354 atttgaa 360  Q
    |||||||    
T  8890496 atttgaa 8890490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 374
Target Start/End: Complemental strand, 30830456 - 30830398
Alignment:
Q  316 ttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||| | ||||||||||  ||||||||||||||||||||| | | |||||||||    
T  30830456 ttactaatcattccattttgccattgcaaatattaatcatttgaaatatggtcctaatt 30830398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 33347623 - 33347673
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttacta 321  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| ||||||    
T  33347623 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttacta 33347673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 360
Target Start/End: Complemental strand, 35312323 - 35312257
Alignment:
Q  294 atttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| ||||| ||| || | ||||||||||| |||||||| |  |||||||||||||||||||||    
T  35312323 atttgaattttcgtccttggagttactaatccttccattttgtcattgcaaatattaatcatttgaa 35312257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 48380710 - 48380784
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| ||||||| ||||| || ||||| ||||||||||| ||| | ||||  |||||| ||||||||||||||    
T  48380710 tataggtcatttgaattttcgtcgctgaagttactaatccttccaatctgccagtgcaaaaattaatcatttgaa 48380784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 374
Target Start/End: Complemental strand, 48381004 - 48380950
Alignment:
Q  320 taatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||| | |||| ||||||||||||||||||||| |||| |||||||||    
T  48381004 taatccttccaatctgccgctgcaaatattaatcatttgacttttggtcctaatt 48380950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 49989830 - 49989912
Alignment:
Q  292 ccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||| | | |||| ||| |||||||  || | |||| ||||||||||||||||||||| |||| |||||||||    
T  49989830 ccatttaatttttcgttcttgaagttattaatcctttcaatctgcctctgcaaatattaatcatttgacttttggtcctaatt 49989912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 26953308 - 26953361
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| || ||||| |||||||||    
T  26953308 tttcatccctgcaaatataggtcatttgaattttcgtctctgaagttactaatc 26953361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 49003082 - 49003135
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||| | |||||||| |||||||||    
T  49003082 tttcatccctgcaaatataggtcatttgaatttccgtccctgaagttactaatc 49003135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 52454950 - 52455015
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||| | ||||| |||||||||  ||||| ||||||| ||||||||||| || |||||||||    
T  52454950 cttaaataggtatttcgtccctgcaaaaataggtcatttgaattttcatccctaaagttactaatc 52455015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 29980845 - 29980897
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaat 323  Q
    |||||||||||||| |||||| ||||||| ||||| ||||| || ||||||||    
T  29980845 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaat 29980897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 3e-49; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 12929289 - 12929404
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12929289 cttaaatatgcatttcatccctgcaaatataggctatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 12929388  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  12929389 acttttggtcctaatt 12929404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 12930774 - 12930889
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  12930774 cttaaatatgcatttcatccctgcaattataggtcatttgatttttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttg 12930873  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  12930874 acttttggtcctaatt 12930889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 134 - 256
Target Start/End: Complemental strand, 46813090 - 46812971
Alignment:
Q  134 ttttgtttgaccacgactcttgtaaagaaatagtaatagggattaacttcatcaattattttgtcaacagagtacaaacaccttaactgatatcaaagga 233  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  46813090 ttttgtttgaccacgactcttgtaaagaaata---atagggattaacttcatcaattattttgtcaacagagtacaaacaccttagctgatattaaagga 46812994  T
Q  234 agagtcaattgtaattagagaaa 256  Q
    |||||||||| |||||| |||||    
T  46812993 agagtcaattctaattaaagaaa 46812971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 7158233 - 7158333
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||    
T  7158233 cttaaatatgcatttcatccctacaattataggccatttgatttttcatccatgaacttactaatccttccattttgcccctgtaaatattaatcatttg 7158332  T
Q  359 a 359  Q
    |    
T  7158333 a 7158333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 37284106 - 37284226
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||    
T  37284106 aaaggcttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatc 37284205  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||| ||  ||||||||||||    
T  37284206 attttaaaattcgtcctaatt 37284226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 37289413 - 37289293
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||    
T  37289413 aaaggcttaaatatgcttttcatccctgtaattataggccatttggtttttcatccctgagcttactaatcctcccattttgcccctgcaattactaatc 37289314  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||| ||  ||||||||||||    
T  37289313 attttaaaattcgtcctaatt 37289293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 12643097 - 12643212
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| ||||| |    
T  12643097 aaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatctctgagcttactaatcctcccattttacccctgcaaaaattaacc 12643196  T
Q  354 atttgaattttcgtcc 369  Q
    |||| || ||||||||    
T  12643197 atttaaaatttcgtcc 12643212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 38643552 - 38643650
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||| |||||||||||    
T  38643552 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccttgaccttactaatcctcccattttgctcctgtaaaaattaatcattt 38643650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 4227270 - 4227160
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||| ||||| |||||     
T  4227270 cttaaatatgcatttcatccctgtaattataggccatttgatttttcatccttgagcttactaatcctcccattttgtccctgtaaaaattaaccattta 4227171  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  4227170 aaatttcgtcc 4227160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 370
Target Start/End: Original strand, 4226127 - 4226238
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||||||||||||| |||| || ||| |||||||||||| |||||||||||||| ||| |||||||||||     
T  4226127 cttaaatatgcatttcatccctgtaattataggccatttgattcttcaaccatgagcttactaatccttccattttgcccctgtaaaaattaatcattta 4226226  T
Q  359 aattttcgtcct 370  Q
    || |||||||||    
T  4226227 aaatttcgtcct 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 45915911 - 45915808
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||||| |||||| ||| |||||||    
T  45915911 aaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctaagcttactaatcctcctattttacccctgtaaaaattaatc 45915812  T
Q  354 attt 357  Q
    ||||    
T  45915811 attt 45915808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 12644231 - 12644121
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||||||||||||||||||| | |||| ||| |||||||||||     
T  12644231 cttaaatatgcatttcatccctataattacaggccatttgatttttcatccctgagcttactaatcctcccattttactcctgtaaaaattaatcattta 12644132  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  12644131 aaatttcgtcc 12644121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 27479989 - 27480099
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| |||||||||||||||||||||||  |||||||||||||||||| |||||||||||||| |||||||||||| || || ||||||||||    
T  27479989 cttaaatatgcttttcatccctgcaattataggccgcttgatttttcatccctgagcttactaatcctcctattttgcccctgtaattactaatcatttg 27480088  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  27480089 aaagttcgtcc 27480099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 22661362 - 22661469
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||||     
T  22661362 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccttgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 22661461  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  22661462 gttcgtcc 22661469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 47558027 - 47558142
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||| ||  |||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||| ||| ||||| |    
T  47558027 aaaggcttaaatatgcatttcatctctttaattataggctatttgatttttcatccctgagtttactaatcctcccattttgcccctgtaaaaattaacc 47558126  T
Q  354 atttgaattttcgtcc 369  Q
    |||| || ||||||||    
T  47558127 atttaaaatttcgtcc 47558142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 46814404 - 46814326
Alignment:
Q  31 tatacaatttatttgtaatgcctaaacttcaaagttcctctaccccgcccgtattcgaagttttagatgtcattccaag 109  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||    
T  46814404 tatacaatttatttgtaatgcctaaacttcaaagttcctctgctccgcccgtattcgaaattttagatgtcattccaag 46814326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 254 - 373
Target Start/End: Complemental strand, 7159315 - 7159197
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||   ||||||||||||| |||||  ||||||| ||||| | |||||| ||||||||||||||||||| ||| ||||||||||||||    
T  7159315 aaaggcttaaatatgtcattcatccctgcaaatatagatcatttgaattttcgttcctgaagttactaatcctcccattttaccc-tgcaaatattaatc 7159217  T
Q  354 atttgaattttcgtcctaat 373  Q
    ||||||||||||||||||||    
T  7159216 atttgaattttcgtcctaat 7159197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 37563736 - 37563622
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||||||||||| ||||| |||||||| ||||||||||| ||| |||||||||||||||||||||| ||||    
T  37563736 cttaaatatgtctttcgtccctgtaaatataggccatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatcttttg 37563637  T
Q  359 aattttcgtcctaat 373  Q
    | |||| ||||||||    
T  37563636 acttttggtcctaat 37563622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 373
Target Start/End: Complemental strand, 31695709 - 31695598
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||| |||||||  |||||||| | ||||||| |||||     
T  31695709 aaatatgcatttcatccctgcaaatataggtcatttgaaatttcatccctaaacttactaatccttccattttttccctgcaattgttaatcacttgaaa 31695610  T
Q  362 tttcgtcctaat 373  Q
    ||| ||||||||    
T  31695609 tttggtcctaat 31695598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 37563356 - 37563471
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||  ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| | | | |||||||||||||||||||||||||    
T  37563356 cttaaatatgtcttttgtccctgcaaatataggccatttgaattttcgtccctgaatttactaatccttctaatctgcccctgcaaatattaatcatttg 37563455  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  37563456 acttttggtcctaatt 37563471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 43938276 - 43938161
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| ||||| |||| ||||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  43938276 cttaaatatgtctttcgtccttgcaaatataagccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 43938177  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  43938176 acttttggtcctaatt 43938161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 27480845 - 27480735
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||| |||||||||||||| || || ||||||||||    
T  27480845 cttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccttgattttactaatccttccattttgcccctgtaattactaatcatttg 27480746  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  27480745 aaagttcgtcc 27480735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 45914528 - 45914636
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||||| ||| ||||||| ||||| ||| |||||||||||     
T  45914528 cttaaatatgcatttcatctctgtaattataggccatttgatttttcatccctaagcttactaat-ctctcattttg-ccctgtaaaaattaatcattta 45914625  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  45914626 aaatttcgtcc 45914636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 43937896 - 43938011
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| || || |||||| ||||||| |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  43937896 cttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 43937995  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  43937996 acttttggtcataatt 43938011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 31694476 - 31694588
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||||||||||||| ||||| ||||||||  |||||||||| || ||||||||||||||||| |  || ||||| | ||||||| |||||     
T  31694476 aaatatgcatttcatccctgcaaatatagtccatttgaaatttcatccctaaatttactaatcctcccattctttccatgcaattgttaatcacttgaaa 31694575  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  31694576 tttggtcctaatt 31694588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 12931108 - 12931005
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| ||| || ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |||||||||||||||||||| |||| |||||    
T  12931108 tttcgtccctgcaaatattggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccatgcaaatattaatcatttgacttttggtcct 12931009  T
Q  371 aatt 374  Q
    ||||    
T  12931008 aatt 12931005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 262 - 373
Target Start/End: Original strand, 40021496 - 40021607
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| || |||||| |||||||  |||||||| | ||||| ||||| || | |||||||| ||||||||||||| ||||||||     
T  40021496 aaatatgcatttcatccctgtaaatataggtcatttgaaatttcatccataaacttgctaattcttctattttgccactgcaaatattaaacatttgaaa 40021595  T
Q  362 tttcgtcctaat 373  Q
     |||||||||||    
T  40021596 attcgtcctaat 40021607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 38644758 - 38644660
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||||||||||||||| | |||||||||||| |||||||||||| |||||| | |||| ||||||| |||||||| || || ||| |||||||||||    
T  38644758 cttaaatatgcatttcattcttgcaattataggtcatttgattttttatccctaagcttattaatccttccattttgaccttgtaaaaattaatcattt 38644660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 359
Target Start/End: Complemental strand, 40022623 - 40022527
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    ||||||| ||||||||||||||| ||||| | ||||||  |||||||||||| |||||||||||| |||||||| | ||||||||||||| |||||||    
T  40022623 aaatatgtatttcatccctgcaaatatagtc-atttgaaatttcatccctgatcttactaatccttccattttgtcactgcaaatattaagcatttga 40022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 26825627 - 26825747
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||| | ||| | |||||||||||| |||||||    
T  26825627 aaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatcattccaatctgcccctgcaaagattaatc 26825726  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| ||| |||||    
T  26825727 atttgacttttggtcttaatt 26825747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 34454867 - 34454747
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||||||||||||| |||||  ||||||| ||||| |||||||| |||||||| ||  || | ||||||||||||||||||||    
T  34454867 aaaggcttaaataggactttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaattctttcaatctgcccctgcaaatattaatc 34454768  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| || ||||||    
T  34454767 atttgacttttggttctaatt 34454747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 12929636 - 12929521
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||| || ||||||| ||| | |||||||| | ||||||||| ||| | ||||| |||||||||||||||||||    
T  12929636 cttaaatatgtctttcgtccctgcaaatattggtcatttgaatttccgtccctgaagtgactaatccttccaatctgcccgtgcaaatattaatcatttg 12929537  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  12929536 acttttggtcctaatt 12929521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 27558222 - 27558119
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| |||  ||| ||||||||||| ||||||||||  |||||||||||||||||||| ||||  ||||    
T  27558222 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcct 27558123  T
Q  371 aatt 374  Q
    ||||    
T  27558122 aatt 27558119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 26830106 - 26830008
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| ||| |||||||| ||| | ||||||| | |||| ||||||||||| |||||||||| ||||||||||||||||||| |||||  |||||||||    
T  26830106 tccctacaagtataggccgttttaattttcattcatgaagttactaatccttccattttgccactgcaaatattaatcattttaatttcagtcctaatt 26830008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 373
Target Start/End: Original strand, 5280286 - 5280388
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||||||| ||||| |  ||||| ||||||||||| ||| | |||| ||| |||||||||| ||||||||||  |||||    
T  5280286 tttcgtccctgcaaatataggccatttgaattttcgttactgaagttactaatccttccaatctgccactgtaaatattaataatttgaatttcggtcct 5280385  T
Q  371 aat 373  Q
    |||    
T  5280386 aat 5280388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 364
Target Start/End: Original strand, 34454486 - 34454591
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||   ||| ||||||||| |||||| ||||||| ||||| ||  |||| ||||||||||| ||| | | |||||||||||||||||||||||    
T  34454486 cttaaatatgtccttcgtccctgcaaatataggtcatttgaattttcgtctttgaagttactaatccttccaatctacccctgcaaatattaatcatttg 34454585  T
Q  359 aatttt 364  Q
    | ||||    
T  34454586 actttt 34454591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 5636045 - 5636128
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||| |||||| ||||||| ||||| ||||| || ||||||||||| ||| ||||||  |||||||||||||||||||||    
T  5636045 tccctgcaaatataggtcatttgaattttcgtccctaaagttactaatccttcca-tttgccattgcaaatattaatcatttgaa 5636128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 47739047 - 47738980
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||| || || ||| |||||||||    
T  47739047 tccctgtatttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatt 47738980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 360
Target Start/End: Original strand, 19979980 - 19980053
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||| ||||||| ||||||||| |||| ||||||||| | ||||||||||  |||||||||||||||||||||    
T  19979980 tataggtcatttgaattttcatcc-tgaagttactaatcattccattttgccgttgcaaatattaatcatttgaa 19980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 15827916 - 15827981
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| |||||||||    
T  15827916 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatc 15827981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 20947207 - 20947296
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||| ||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | |||| || |||||||||||||||||||    
T  20947207 tttcgtcccttcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccactacaaatattaatcatttgaa 20947296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 26825825 - 26825890
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||| | ||||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  26825825 cttaaataggtatttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 26825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 27557862 - 27557951
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| |||||| || |||||| ||||||| ||||| ||| |||| ||| |||| || ||||||||||  |||||||||||||||||||||    
T  27557862 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaa 27557951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 12928034 - 12928153
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| || |||||| ||||||||| |||| ||||| ||||| || ||||||||||| ||| | || || |||| |||||||||    
T  12928034 aaaggcttaaatatgtctttcgtcgctgcaaatataggccacttgaattttcgtccctaaagttactaatccttccaatctg-ccatgcatatattaatc 12928132  T
Q  354 atttgaattttcgtcctaatt 374  Q
    ||||||  ||| |||||||||    
T  12928133 atttgacatttggtcctaatt 12928153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 26828504 - 26828575
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||| | ||||| ||||||||||| ||  |||||||||| ||||||| || |||||||||||||||||||    
T  26828504 tataggtcgtttgaattttcatccctaaaagtactaatccttccattttaccactgcaaatattaatcattt 26828575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 47733070 - 47733137
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| | ||||||||||||||| ||| ||||||||||||||||||| || || ||| |||||||||    
T  47733070 tccctgtaattactaatcctcccaatttacccctgcaaatattaatcacttaaaatttggtcctaatt 47733137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 12928404 - 12928306
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||| ||||| |||||||| ||||| ||| |||| |||||||||||   | | |||| |||||||||| |||||||||| |||| || ||||||    
T  12928404 tccctgcaaatatagaccatttgaattttcgtccttgaagttactaatccttttaatctgccgctgcaaatatcaatcatttgacttttggttctaatt 12928306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 364
Target Start/End: Complemental strand, 26825993 - 26825907
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    ||||||| |||| | ||||||| ||||| ||| |||| ||| |||||||  || | |||||||||||||||||||||||||| ||||    
T  26825993 cctgcaaatatatgtcatttgaattttcgtccatgaagttattaatcctttcaatctgcccctgcaaatattaatcatttgactttt 26825907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 34454687 - 34454740
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  34454687 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 34454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 37563561 - 37563614
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  37563561 tttcatccctgcaaatatagggcatttgaattttcgtccctgaagttactaatc 37563614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 44545943 - 44545879
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||| ||||| |||||||| ||||||||||| | ||||| ||  ||||||||||||||||||    
T  44545943 catttgaattttcgtccctgaagttactaatccttcaattttaccattgcaaatattaatcattt 44545879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 47081844 - 47081964
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||| ||| |||| | ||||||| |||||||| ||||| |||||||||||  || | ||||  || |||||||||||    
T  47081844 aaaggcttaaataggtctttcgtcccttcaaatatatgtcatttgaattttcatctctgaagttactaatcctttcaatctgccattgtaaatattaatc 47081943  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| ||| |||||    
T  47081944 atttgatttttggtcttaatt 47081964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 23191184 - 23191121
Alignment:
Q  311 tgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||| |||||||| || ||| | |||| ||||||||||||||||||||| |||| |||||||||    
T  23191184 tgaatttactaattcttccaatctgccactgcaaatattaatcatttgacttttggtcctaatt 23191121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 314
Target Start/End: Complemental strand, 47121466 - 47121411
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaa 314  Q
    |||||||| || |||||||||||||| |||||| ||||||| ||||| ||||||||    
T  47121466 cttaaataggcctttcatccctgcaaatataggtcatttgaattttcgtccctgaa 47121411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 270 - 324
Target Start/End: Original strand, 43938100 - 43938154
Alignment:
Q  270 atttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||| ||| |||||| ||||||| ||||| |||||||| |||||||||    
T  43938100 atttcatccctacaaatataggtcatttgaattttcgtccctgaagttactaatc 43938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 12929461 - 12929514
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||| |||| |||||||||    
T  12929461 tttcatccctgcaaatataggtcatttgaattttcgtccatgaagttactaatc 12929514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 25049531 - 25049438
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||| |||||| || |||||| ||||||| ||||  |||||||| ||||||||| | ||| | |||| |||||||  |||||||||||| ||||    
T  25049531 tttcgtccctgtaaatataggtcatttgaatttttctccctgaagttactaatctttccaatatgccactgcaaaatttaatcatttgactttt 25049438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 5636372 - 5636292
Alignment:
Q  294 atttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||| |||||||| ||||||||||| ||| | |||| |||||||  ||||| ||||||  ||| |||||||||    
T  5636372 atttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaaatttaattatttgacatttggtcctaatt 5636292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 7e-47; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 239 - 374
Target Start/End: Complemental strand, 17784503 - 17784368
Alignment:
Q  239 caattgtaattagagaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgccc 338  Q
    |||| ||| ||||| |||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17784503 caatggtatttagaaaaaggcttaaatatgcttttcatccctgcaatgataggccatttgatttttcatccatgaacttactaatcctcccattttgccc 17784404  T
Q  339 ctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||||||||||||| ||  ||||||||||||    
T  17784403 ctgcaaatattaatcattttaaaattcgtcctaatt 17784368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 259 - 367
Target Start/End: Complemental strand, 33401224 - 33401116
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||    
T  33401224 cttaaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgaacttactaatcctcccattttgcccctgtaaaagttaatcatttg 33401125  T
Q  359 aattttcgt 367  Q
    ||| |||||    
T  33401124 aatattcgt 33401116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 349
Target Start/End: Complemental strand, 8427459 - 8427373
Alignment:
Q  263 aatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatatt 349  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8427459 aatatgcatttcatccctgcaattataggtcatttgatttttcatccctggacttactaatcctcccattttgcccctgcaaatatt 8427373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 33399968 - 33400078
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  33399968 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 33400067  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  33400068 aaagttcgtcc 33400078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 253 - 369
Target Start/End: Original strand, 14656476 - 14656592
Alignment:
Q  253 gaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    ||||| ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||| |||  |||||    
T  14656476 gaaaggcttaaatatgcttttcatccctgcaattataggctgtttgatttttcatccctgagcttactaatcctcctattttgcccctgtaaaagttaat 14656575  T
Q  353 catttgaattttcgtcc 369  Q
    ||||||||  |||||||    
T  14656576 catttgaaagttcgtcc 14656592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 4116801 - 4116911
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  4116801 cttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttg 4116900  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  4116901 aaaattcgtcc 4116911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 4117645 - 4117535
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||  |||||||||||    
T  4117645 cttaaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaagttaatcatttg 4117546  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  4117545 aaaattcgtcc 4117535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 13480210 - 13480325
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  13480210 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 13480309  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  13480310 acttttggtcctaatt 13480325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 23291746 - 23291861
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  23291746 cttaaatatgtctttcgtccctacaaatataggccatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 23291845  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  23291846 acttttggtcctaatt 23291861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 373
Target Start/End: Original strand, 8427202 - 8427316
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||||||| ||||| |||||| ||||||| ||||| || || || ||||||||||||||||||||||||||||||||||||||| |||    
T  8427202 cttaaatatgtctttcatccttgcaaatataggtcatttgaattttcgtctctcaagttactaatcctcccattttgcccctgcaaatattaatcagttg 8427301  T
Q  359 aattttcgtcctaat 373  Q
    ||||||| |||||||    
T  8427302 aattttcatcctaat 8427316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 260 - 369
Target Start/End: Complemental strand, 1661527 - 1661418
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| || || |||||||||||    
T  1661527 ttaaatatgattttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttacccctgtaattactaatcatttga 1661428  T
Q  360 attttcgtcc 369  Q
    |  |||||||    
T  1661427 aagttcgtcc 1661418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 5064337 - 5064452
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||| | ||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  5064337 cttaaatatgtctttcgtccctgtaaatataagtcatttgaattttcgtccctgaagttactaatcctcccaatttgcccctgcaaatattaatcatttg 5064436  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  5064437 acttttggtcctaatt 5064452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 14657307 - 14657197
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||||| || || ||||||||||    
T  14657307 cttaaatatgcttttcatccctataattataggccgtttgattttttatccctgaccttactaatccttccattttgcccctgtaattactaatcatttg 14657208  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  14657207 aaagttcgtcc 14657197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 260 - 374
Target Start/End: Complemental strand, 5064716 - 5064602
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| || |||||| |||||||||||||| ||||| |||||||  ||||||||||| ||| | ||||||||||||||||||||||||||    
T  5064716 ttaaatatgtctttcgtctctgcaaatataggccatttgaattttcgtccctgaggttactaatccttccaatctgcccctgcaaatattaatcatttga 5064617  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  5064616 cttttggtcctaatt 5064602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 278 - 374
Target Start/End: Complemental strand, 32337930 - 32337834
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| |||||| ||||||| ||||| |||||||| ||||| ||||| ||| | |||||||||||||||||||||||||| ||||||||||||||    
T  32337930 cctgcaaatataggtcatttgaattttcgtccctgaagttactgatccttccaatatgcccctgcaaatattaatcatttgacttttcgtcctaatt 32337834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 32337578 - 32337681
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| ||||| |||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| | |||    
T  32337578 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttgggcct 32337677  T
Q  371 aatt 374  Q
    ||||    
T  32337678 aatt 32337681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 253 - 374
Target Start/End: Complemental strand, 15819878 - 15819757
Alignment:
Q  253 gaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    ||||| ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | | ||| |||||||| ||||    
T  15819878 gaaaggcttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctacccttgcaaatactaat 15819779  T
Q  353 catttgaattttcgtcctaatt 374  Q
    ||||||| |||| |||||||||    
T  15819778 catttgacttttggtcctaatt 15819757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 259 - 364
Target Start/End: Complemental strand, 30234974 - 30234869
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| ||||||   ||||| |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  30234974 cttaaatatgtctttcgtccctgcaaatataggttgtttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 30234875  T
Q  359 aatttt 364  Q
    | ||||    
T  30234874 actttt 30234869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 738079 - 737964
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||||| ||| |||||||||||||    
T  738079 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttccaatctgccccttcaagtattaatcatttg 737980  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  737979 acttttggtcctaatt 737964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 13480590 - 13480475
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| || || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||||||||||||    
T  13480590 cttaaatatgtctttcgtccttgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctacaaatattaatcatttg 13480491  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  13480490 acttttggtcctaatt 13480475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 276 - 374
Target Start/End: Complemental strand, 22494245 - 22494147
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||||||||||||| |||||||||| |||| |||||||||    
T  22494245 tccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttgacttttggtcctaatt 22494147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 3299941 - 3299840
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||| ||||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| ||| | ||||  |||||||||||||||||||    
T  3299941 cttaaatatgtatttcgtccctgcaaatataggtcatttgaattttcgtccttgaagttactaatccttccaatctgccattgcaaatattaatcatttg 3299842  T
Q  359 aa 360  Q
    ||    
T  3299841 aa 3299840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 20560930 - 20561045
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||| | ||| ||||| |  || | |||||||||||||||||||||||||    
T  20560930 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgtagttattaatcatttcaatctgcccctgcaaatattaatcatttg 20561029  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  20561030 acttttggtcctaatt 20561045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 20995039 - 20994968
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    ||||||| |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| ||||    
T  20995039 catttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttgactttt 20994968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 23292126 - 23292011
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |  ||||||||||||||||||||||    
T  23292126 cttaaatatgtctttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaatcatttg 23292027  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  23292026 acttttgatcctaatt 23292011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 9607686 - 9607593
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||||| | | | |||||||||||||||||||||||||| ||||    
T  9607686 tttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatccttctaatatgcccctgcaaatattaatcatttgactttt 9607593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 7612562 - 7612651
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| ||||| |||||||| ||||| |||||||| |||||||| ||  ||||||| |  |||||||||||||||||||||    
T  7612562 tttcgtccctgcaaatatagaccatttgaattttcgtccctgaagttactaattctttcattttgtcattgcaaatattaatcatttgaa 7612651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 21880366 - 21880481
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| | |||| || |||| | ||||||| ||||| || ||||| |||||||||||  || | |||||||||||||||||||||||||    
T  21880366 cttaaatatgtctttcgttcctgtaaatataagtcatttgaattttcgtctctgaagttactaatcctttcaatctgcccctgcaaatattaatcatttg 21880465  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| || ||||||    
T  21880466 acttttggtactaatt 21880481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 21880734 - 21880631
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||| ||| |||| || |||||| ||||| |||||||| ||||||||||| ||| | |  ||||||||||||||| ||||||| |||| |||||    
T  21880734 tttcgtccctccaaatatatgcaatttgaattttcgtccctgaagttactaatccttccaatctatccctgcaaatattaagcatttgacttttggtcct 21880635  T
Q  371 aatt 374  Q
    ||||    
T  21880634 aatt 21880631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 26503724 - 26503621
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||| | ||||||| ||||| ||| |||| ||| ||||||| ||| |  ||| ||||||||||||||||||||| |||| |||||    
T  26503724 tttcgtccctgcaaatataagtcatttgaattttcgtccatgaagttattaatccttccaatccgccactgcaaatattaatcatttgacttttggtcct 26503625  T
Q  371 aatt 374  Q
    ||||    
T  26503624 aatt 26503621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 20561275 - 20561194
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||||| ||| |||  ||| ||||||| ||| | |||||||||||||||||||||||||| |||| |||||||||    
T  20561275 catttgaattttcgtccttgatgttattaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatt 20561194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 1066487 - 1066420
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| ||||| |||||||| ||||||||  | ||||||||||  |||||||||||||||||||||    
T  1066487 catttgaattttcgtccctgaagttactaatatttccattttgccattgcaaatattaatcatttgaa 1066420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 324
Target Start/End: Original strand, 20561122 - 20561187
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||  |||||||||||||| |||||| ||||||| ||||| ||| |||| |||||||||    
T  20561122 cttaaatatgtctttcatccctgcaaatataggtcatttgaattttcgtccttgaagttactaatc 20561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 23291921 - 23291868
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  23291921 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 23291868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 31386813 - 31386902
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||||||| || ||||||  |||||| | ||| ||| |||| || |||||||| |||||||||   |||||||||||||||||||||    
T  31386813 tttcatccctgtaaatataggatatttgaatattcgtccttgaagttgctaatccttccattttgcaattgcaaatattaatcatttgaa 31386902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 31879472 - 31879560
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| ||| || ||||||| ||||| |||| ||| ||||||||| | ||||||||||  ||||||||||||| |||||||    
T  31879472 tttcgtccctgcaaatat-ggtcatttgaattttcgtccccgaagttactaatctttccattttgccattgcaaatattaataatttgaa 31879560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 13480385 - 13480333
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaat 323  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| ||||||||    
T  13480385 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaat 13480333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 22493910 - 22493997
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||| ||||| |||||||| ||||||||| |  || | | ||| |||||||||||||||||||| |||| |||||||||    
T  22493910 tataggtcatttgaattttcgtccctgaagttactaatcttttcaatctaccc-tgcaaatattaatcatttgacttttggtcctaatt 22493997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 3299581 - 3299676
Alignment:
Q  279 ctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| |||| | ||||||| ||||| ||| |||| ||||||||| | ||| ||||||  |||||||||||||||||| | ||||  ||||||||    
T  3299581 ctgcaaatataagtcatttgaattttcgtccatgaagttactaatcattccaatttgccattgcaaatattaatcatttcacttttgatcctaatt 3299676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Complemental strand, 16704679 - 16704624
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcct 326  Q
    |||| ||||||||| |||||||||||||| ||||| ||| |||| |||||||||||    
T  16704679 tttcgtccctgcaaatataggccatttgaattttcgtccttgaagttactaatcct 16704624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 20994821 - 20994935
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||  ||||||| ||||| || ||||| ||||||||||| | | | || |||||||||||||||||||||     
T  20994821 cttaaatatgtctttcgtccctgtaaatatagttcatttgaattttcgtctctgaagttactaatccttctaatctg-ccctgcaaatattaatcattta 20994919  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  20994920 acttttggtcataatt 20994935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 324
Target Start/End: Complemental strand, 22494070 - 22494004
Alignment:
Q  258 acttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||| |  |||||||||||||| ||||||  |||||| ||||| |||||||| |||||||||    
T  22494070 acttaaataagtctttcatccctgcaaatataggttatttgaattttcgtccctgaagttactaatc 22494004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 20774103 - 20774192
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||| | ||| |||| | ||||||| ||||| ||| |||| ||| |||||||  ||||||| |  |||||||||||||||||||||    
T  20774103 tttcatccttacaaatatatgtcatttgaattttcgtccttgaagttattaatcctttcattttgtcattgcaaatattaatcatttgaa 20774192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 32337741 - 32337688
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| || ||||| |||||||||    
T  32337741 tttcatccctgcaaatataggtcatttgaattttcgtctctgaagttactaatc 32337688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 357
Target Start/End: Complemental strand, 3586578 - 3586495
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||| ||||||||| ||||| | |||||| ||||| |||   || |||||| |||| ||||||||||  ||||||||||||||||||    
T  3586578 tttcgtccctgcaaatatagactatttgaattttcgtcc---aaattactattccttccattttgccattgcaaatattaatcattt 3586495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 323
Target Start/End: Original strand, 5064542 - 5064594
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaat 323  Q
    |||||||||||||| |||||  ||||||| ||||| |||||||| ||||||||    
T  5064542 tttcatccctgcaaatatagatcatttgaattttcgtccctgaagttactaat 5064594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 7612936 - 7612816
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    ||||||||||||| |  |||| | |||| || |||| || |||||| ||||| |||||||| |||| |||| | ||| | |||| |||||||  ||||||    
T  7612936 aaagacttaaataggtctttcgtgcctgtaaatataagctatttgaattttcgtccctgaaattaccaatctttccaatctgccactgcaaaatttaatc 7612837  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| ||| |||||    
T  7612836 atttgacttttggtcataatt 7612816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold1493
Description:

Target: scaffold1493; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 595 - 710
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  595 cttaaatatgcatttcatcactgcaattataggtcatttgatttttcatccctgaacttactaatcctctcattttgcccctgcaaatattaatcatttg 694  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| || ||||||    
T  695 acttttggttctaatt 710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 980 - 860
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| |||||| || ||| |||||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  980 aaaggcttaaatatgtctttcgtccctgtaaatattggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 881  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  880 atttgacttttggtcctaatt 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1493; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 800 - 853
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  800 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 20101772 - 20101887
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  20101772 cttaaatatgcttttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgcaattaataatcatttg 20101871  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  20101872 aaaattcgtcctaatt 20101887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 24387353 - 24387468
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || || ||| ||||||||||||    
T  24387353 cttaaatatgcatttcatccctgcaattataggccatttaatttttcatccctgagcttactaatcctcccattttgtccatgtaaaaattaatcatttg 24387452  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  24387453 aaaattcgtcctaatt 24387468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 25623290 - 25623400
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||     
T  25623290 cttaaatatgcatttcatccctataattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaaaaattaatcattta 25623389  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  25623390 aaatttcgtcc 25623400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 25624531 - 25624421
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||     
T  25624531 cttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccatttttcccctgtaaaaattaatcattta 25624432  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  25624431 aaatttcgtcc 25624421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 264 - 373
Target Start/End: Complemental strand, 19620886 - 19620777
Alignment:
Q  264 atatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattt 363  Q
    ||||||||||| ||||| ||| |||||| |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19620886 atatgcatttcgtccctacaaatataggtcatttgaaatttcatccctgaacttactaatccttccattttgcccctgcaaatattaatcatttgaattt 19620787  T
Q  364 tcgtcctaat 373  Q
    || |||||||    
T  19620786 tcatcctaat 19620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 20103242 - 20103127
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||| ||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || ||||||||||    
T  20103242 cttaaatatgctttttatccctgtaattataggccattagatttttcatccctgagcttactaatcctcccattttgcccatgcaattactaatcatttg 20103143  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  20103142 aaaattcgtcctaatt 20103127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 254 - 369
Target Start/End: Original strand, 29957814 - 29957929
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||    
T  29957814 aaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 29957913  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  29957914 atttgaaagttcgtcc 29957929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 20982521 - 20982627
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || |||||    
T  20982521 aaaggcttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatc 20982620  T
Q  354 atttgaa 360  Q
    |||||||    
T  20982621 atttgaa 20982627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 20983359 - 20983249
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  20983359 cttaaatatgcttttcatccctgtaattatagaccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 20983260  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  20983259 aaagttcgtcc 20983249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 357
Target Start/End: Complemental strand, 24388354 - 24388256
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| ||||||||||  || ||| |||||||||||    
T  24388354 cttaaatatgcatttcatccctgcaattataagcaatttgatttttcatccctgagcttactaatccttccattttgccattgtaaaaattaatcattt 24388256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 16367333 - 16367230
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||| |||||    
T  16367333 tttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaatcatttgacttttggtcct 16367234  T
Q  371 aatt 374  Q
    ||||    
T  16367233 aatt 16367230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 262 - 372
Target Start/End: Original strand, 43236509 - 43236619
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||| |||||||||| ||||||||||||||  |||||||||||||||||||||||||||||      ||||||||||||||||||||||| |    
T  43236509 aaatatgcattttatccctgcaaatataggccatttgaaatttcatccctgaacttactaatcctcccaaaccttccctgcaaatattaatcatttgagt 43236608  T
Q  362 tttcgtcctaa 372  Q
    ||| |||||||    
T  43236609 tttggtcctaa 43236619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 245 - 374
Target Start/End: Original strand, 16366951 - 16367080
Alignment:
Q  245 taattagagaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaa 344  Q
    ||||| || |||| ||||||||||  |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||    
T  16366951 taatttgaaaaaggcttaaatatgtctttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaa 16367050  T
Q  345 atattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||||||||| |||| |||||||||    
T  16367051 atattaatcatttgacttttggtcctaatt 16367080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 29958645 - 29958544
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||  || || ||||||||||    
T  29958645 cttaaatatgtttttcatccctgtaattataggctgtttgatttttcatccctgaacttactaatccttccattttgcccctataattactaatcatttg 29958546  T
Q  359 aa 360  Q
    ||    
T  29958545 aa 29958544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 1149939 - 1150054
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||| | ||||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| |  ||||||||||||||||||||||||    
T  1149939 cttaaataggtatttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatcggcccctgcaaatattaatcatttg 1150038  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  1150039 acttttggtcctaatt 1150054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 10446834 - 10446932
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||||    
T  10446834 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcattt 10446932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 1150324 - 1150204
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| | ||||||| |||||| ||||||| ||||| |||||||| |||||||||||  || | ||||||||||||||||||||    
T  1150324 aaaggcttaaatatgtctttcgtgcctgcaaatataggtcatttgaattttcgtccctgaaattactaatcctttcaatctgcccctgcaaatattaatc 1150225  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  1150224 atttgacttttggtcctaatt 1150204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 20911127 - 20911247
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||||||||||||||||||    
T  20911127 aaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatc 20911226  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| ||| |||||    
T  20911227 atttgacttttggtcataatt 20911247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 32519157 - 32519272
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||| |||||||||||||||||||||    
T  32519157 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaaattactaatccttccaatatgctcctgcaaatattaatcatttg 32519256  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| || ||||||    
T  32519257 acttttggttctaatt 32519272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 32519542 - 32519422
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||| | ||||||| ||||| | |||||| |||||||||||  || | ||||||||||||||||||||    
T  32519542 aaaggcttaaatatgtctttcgtccctgcaaatataagtcatttgaattttcgttcctgaagttactaatcctttcaatctgcccctgcaaatattaatc 32519443  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  32519442 atttgacttttggtcctaatt 32519422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 33881580 - 33881692
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| || |||||| |||||||  |||||||||| |  ||| |||| ||||||||||||| |||||||||||||||| || | |    
T  33881580 aaatatgcatttcatccctgtaaatatagggcatttgaaatttcatccctaaggttattaattctcccattttgccactgcaaatattaatcacttcagt 33881679  T
Q  362 tttcgtcctaatt 374  Q
    ||| |||||||||    
T  33881680 tttggtcctaatt 33881692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 33882973 - 33882857
Alignment:
Q  256 agacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcat 355  Q
    ||||| ||||||||||||||||||||||| |||| | |||||||  ||||||   |||  ||||||||||||||||||||  || ||||||||||||||     
T  33882973 agactaaaatatgcatttcatccctgcaaatataaggcatttgaaatttcatatatgaggttactaatcctcccattttg--ccagcaaatattaatcac 33882876  T
Q  356 ttgaattttcgtcctaatt 374  Q
    ||||||||| |||||||||    
T  33882875 ttgaattttggtcctaatt 33882857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 262 - 372
Target Start/End: Complemental strand, 43237815 - 43237705
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    ||||||||||||  ||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||      |||||||||||||||||| |||| |    
T  43237815 aaatatgcattttgtccctgcaaatataggccatttgaaattttatccctgaacttactaatcctcccaaaccttccctgcaaatattaatcacttgagt 43237716  T
Q  362 tttcgtcctaa 372  Q
    ||| |||||||    
T  43237715 tttggtcctaa 43237705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 23206496 - 23206391
Alignment:
Q  269 catttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtc 368  Q
    |||||||||  ||||| |||||| |||||||  |||||||| |||| |||||||||||| ||||||||| ||||||||||||| |||| |||  ||||||    
T  23206496 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtc 23206397  T
Q  369 ctaatt 374  Q
    ||||||    
T  23206396 ctaatt 23206391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 23678100 - 23677995
Alignment:
Q  269 catttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtc 368  Q
    |||||||||  ||||| |||||| |||||||  |||||||| |||| |||||||||||| ||||||||| ||||||||||||| |||| |||  ||||||    
T  23678100 catttcatctttgcaaatatagggcatttgaaatttcatccttgaagttactaatcctctcattttgccactgcaaatattaagcattcgaaaattcgtc 23678001  T
Q  369 ctaatt 374  Q
    ||||||    
T  23678000 ctaatt 23677995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 370
Target Start/End: Complemental strand, 22731914 - 22731803
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||||||||||| ||||| ||| |||| |||||| ||||  || | || ||||||||||||||||||||||    
T  22731914 cttaaatatgtctttcgtccctgcaaatataggccatttgaattttcgtccgtgaagttactattcctttcaatctgtccctgcaaatattaatcatttg 22731815  T
Q  359 aattttcgtcct 370  Q
    | |||| |||||    
T  22731814 acttttggtcct 22731803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 45663890 - 45663775
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || ||||| | |||||| ||||| |||||||| ||||||||||| | | | || ||||||||||||||||||||||    
T  45663890 cttaaatatgtctttcgtccctgtaaatatagtcaatttgaattttcgtccctgaagttactaatccttcaaatctggccctgcaaatattaatcatttg 45663791  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  45663790 acttttggtcctaatt 45663775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 9694112 - 9694023
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||| ||||| |||||| ||||||| ||||| |||||||| ||||||||||| |||||||| |  |||||||||||||||||||||    
T  9694112 tttcgtccatgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccattttgtcattgcaaatattaatcatttgaa 9694023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 372
Target Start/End: Original strand, 7981051 - 7981162
Alignment:
Q  261 taaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||  ||||||||| |||||| |||||||  ||||||||| |||||||||||||||||||      |||||||||||||||||| ||||     
T  7981051 taaaaatgcattttctccctgcaactataggtcatttgaaatttcatccccgaacttactaatcctcccaaaccttccctgcaaatattaatcacttgag 7981150  T
Q  361 ttttcgtcctaa 372  Q
    |||| |||||||    
T  7981151 ttttggtcctaa 7981162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 13646130 - 13646197
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||| |||||||||    
T  13646130 tccctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatt 13646197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 13652143 - 13652076
Alignment:
Q  307 tccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| || || ||| |||||||||    
T  13652143 tccctgtacttactaatcctcccaatttgcccctgcaaatattaatcacttaaaatttggtcctaatt 13652076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 271 - 357
Target Start/End: Original strand, 17366640 - 17366726
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||||| ||||| |||||| ||||||| ||||| |||||||| ||| ||||||| ||| | |||| |||||||||||||||||||    
T  17366640 tttcatccatgcaaatataggtcatttgaattttcttccctgaatttaataatccttccaatctgccactgcaaatattaatcattt 17366726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 18476910 - 18477024
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    ||||||| || |||| ||||||||| |||||| ||||||| ||||  |||||||| ||||||||||| ||| | |||| |||||||  ||||||||||||    
T  18476910 ttaaataggcctttcgtccctgcaactataggtcatttgaatttttgtccctgaagttactaatccttccaatctgccactgcaaaatttaatcatttga 18477009  T
Q  360 attttcgtcctaatt 374  Q
     ||||  ||||||||    
T  18477010 cttttgatcctaatt 18477024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 260 - 374
Target Start/End: Original strand, 19606920 - 19607034
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| |||||| || |||| | ||||||| ||||| |||||||| ||||||||||| ||| | || |  ||||||||||||||||||||    
T  19606920 ttaaatatgtctttcgtccctgtaaatatatgtcatttgaattttcgtccctgaagttactaatccttccaatctgtcgttgcaaatattaatcatttga 19607019  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  19607020 cttttggtcctaatt 19607034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 364
Target Start/End: Complemental strand, 37985098 - 37985004
Alignment:
Q  270 atttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    ||||| ||||||||| |||| | ||||||||||||| || ||||| ||||||||||| ||| |||||| |||||||  |||||||||||| ||||    
T  37985098 atttcgtccctgcaaatatatgtcatttgatttttcgtctctgaaattactaatccttccaatttgccactgcaaaatttaatcatttgactttt 37985004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 43681853 - 43681963
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| |||| | ||||||| ||||| ||| | || ||||||||| | ||||||||||  ||||||||||||||    
T  43681853 aaaggcttaaatatgtctttcgtccctgcaaatatatgtcatttgaattttcgtccataaagttactaatcattccattttgccattgcaaatattaatc 43681952  T
Q  354 atttgaatttt 364  Q
    |||||| ||||    
T  43681953 atttgactttt 43681963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 28599441 - 28599530
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||| ||||| |||||  ||||||| ||||| ||| |||| ||||||||||| ||||||||||  |||||||||||||||||||||    
T  28599441 tttcgtccttgcaaatatagatcatttgaattttcgtccatgaagttactaatccttccattttgccattgcaaatattaatcatttgaa 28599530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 17580365 - 17580445
Alignment:
Q  294 atttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||| |||| ||| ||| ||||||| ||| |||||||||||||||||||||||||||| ||||  ||||||||    
T  17580365 atttgaattttcgtccccgaagttattaatccttccaatttgcccctgcaaatattaatcatttgacttttgatcctaatt 17580445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Original strand, 19619584 - 19619628
Alignment:
Q  315 cttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||||||||||||||||||||||||||||||| ||||||    
T  19619584 cttactaatcctcccattttgcccctgcaaatattaattatttga 19619628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 279 - 374
Target Start/End: Original strand, 8089474 - 8089569
Alignment:
Q  279 ctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| |||| | ||||||| ||||| ||  |||| ||||||||||| ||| | ||||||||||||||| |||||||||| |||| |||||||||    
T  8089474 ctgcaaatatatgtcatttgaattttcgtctttgaagttactaatccttccaatctgcccctgcaaatatcaatcatttgacttttggtcctaatt 8089569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 23183600 - 23183716
Alignment:
Q  262 aaatatgcatttcatccctgcaattata----ggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||| ||||||||||||||||| ||||    |  |||||||  ||||||||  ||| ||||||||||||| |||||||| ||||||||||||| |||||    
T  23183600 aaataggcatttcatccctgcaaatatatatagagcatttgaaatttcatccaagaagttactaatcctcctattttgccactgcaaatattaagcattt 23183699  T
Q  358 gaattttcgtcctaatt 374  Q
     ||  ||||||||||||    
T  23183700 aaaaattcgtcctaatt 23183716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 23594857 - 23594973
Alignment:
Q  262 aaatatgcatttcatccctgcaattata----ggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||| ||||||||||||||||| ||||    |  |||||||  ||||||||  ||| ||||||||||||| |||||||| ||||||||||||| |||||    
T  23594857 aaataggcatttcatccctgcaaatatatatagagcatttgaaatttcatccaagaagttactaatcctcctattttgccactgcaaatattaagcattt 23594956  T
Q  358 gaattttcgtcctaatt 374  Q
     ||  ||||||||||||    
T  23594957 aaaaattcgtcctaatt 23594973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 286 - 360
Target Start/End: Complemental strand, 41846747 - 41846673
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||||||||| ||||| | |||||| |||||| |||| ||| | |||| ||||||||||||||||||||||    
T  41846747 tataggccatttgaattttcgttcctgaagttactactccttccaatctgccactgcaaatattaatcatttgaa 41846673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 357
Target Start/End: Complemental strand, 18477257 - 18477160
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||| ||||| ||||||||| |||| ||||||| | ||||| ||| |||| ||||||||| | ||||||||||  || | |||||||||||||    
T  18477257 ttaaatatgtatttcgtccctgcaaatataagccatttaaattttcgtccatgaagttactaatcattccattttgccattgaagatattaatcattt 18477160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 22309801 - 22309712
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||  | ||| | || | ||||||||||||||||||||||    
T  22309801 tttcttccctgcaaatataggtcatttgaattttcgtccctgaagttactaattgttccaatctgacactgcaaatattaatcatttgaa 22309712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 364
Target Start/End: Original strand, 41846406 - 41846499
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaatttt 364  Q
    |||| ||||| ||| |||||| ||||||| ||||| |||||||| ||| ||||||| | | | |||| ||||||||||||||||||||| ||||    
T  41846406 tttcgtccctacaaatataggtcatttgaattttcgtccctgaagttagtaatccttctaatctgccactgcaaatattaatcatttgactttt 41846499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 330
Target Start/End: Complemental strand, 7983905 - 7983837
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctccca 330  Q
    |||||||||||||||| | |||| |||||| |||||||  |||||||  ||||||||||||||||||||    
T  7983905 aaatatgcatttcatctcagcaaatataggtcatttgaaatttcatctatgaacttactaatcctccca 7983837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 374
Target Start/End: Original strand, 9693771 - 9693859
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||||||||| | ||||| || ||||| ||||||||||| ||| | |||| |||||||  |||||||||||| |||| |||||||||    
T  9693771 tataggccattttaattttcgtcactgaagttactaatccttccaatctgccactgcaaagtttaatcatttgacttttggtcctaatt 9693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 21103087 - 21103150
Alignment:
Q  258 acttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcct 326  Q
    |||||||||||| ||||||||     |||||||||| |||| |||||||||||||||||||||||||||    
T  21103087 acttaaatatgcttttcatcc-----attataggccgtttggtttttcatccctgaacttactaatcct 21103150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 17580712 - 17580613
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttga-tttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaat 352  Q
    |||| ||||||||||  |||| ||||| ||| |||||| ||||||| |||||| ||||| || ||||||||||| ||| | |||| ||||||||||||||    
T  17580712 aaaggcttaaatatgtctttcgtccctacaaatataggtcatttgaatttttcgtccctaaagttactaatccttccaatatgccactgcaaatattaat 17580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 20911511 - 20911397
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| |||||| || |||||| ||||||| ||||  |||||||| ||||||||| | ||| | || || |||||||||||||||||||    
T  20911511 cttaaatatgtctttcgtccctgtaaatataggtcatttgaatttttgtccctgaagttactaatcattccaatctgtcc-tgcaaatattaatcatttg 20911413  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  20911412 acttttggtcataatt 20911397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 364
Target Start/End: Original strand, 22309428 - 22309538
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||| ||||||| ||||  ||  |||| ||||||||||| ||| | |||| ||||| |||||||||    
T  22309428 aaaggcttaaataggtctttcgtccctgcaaatataggtcatttgaattttagtcaatgaagttactaatccttccaatctgccactgcacatattaatc 22309527  T
Q  354 atttgaatttt 364  Q
    |||||| ||||    
T  22309528 atttgactttt 22309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 17366962 - 17366889
Alignment:
Q  301 ttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| ||||| || ||||||||||| ||| | |||| |||||||||||||||| |||| |||| |||||||||    
T  17366962 ttttcgtccctaaagttactaatccttccaatctgccactgcaaatattaatcaattgacttttggtcctaatt 17366889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 32519332 - 32519279
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  32519332 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 32519279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 301 - 360
Target Start/End: Original strand, 4375593 - 4375652
Alignment:
Q  301 ttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||||||| ||||| ||| ||||||| ||||||||||   ||||||||||||||||||||    
T  4375593 ttttcatctctgaaattattaatccttccattttgccatagcaaatattaatcatttgaa 4375652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 4375921 - 4375818
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||| ||||| |||| | ||||| | ||||| ||| |||| ||||||||||| ||| | |||| |||||||  |||||||||||| |||| |||||    
T  4375921 tttcgtccatgcaaatatatgtcatttaaattttcgtccatgaagttactaatccttccaatctgccactgcaaaatttaatcatttgacttttggtcct 4375822  T
Q  371 aatt 374  Q
    ||||    
T  4375821 aatt 4375818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 5608942 - 5608875
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| ||||| || || || |||||||||||  |||||||||  |||||||||||||||||||||    
T  5608942 catttgaattttcctctctaaagttactaatcctttcattttgccattgcaaatattaatcatttgaa 5608875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 28599797 - 28599694
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    ||||||||||| || |||| | ||||||| ||||| || ||||| |||| |||||| ||| | ||||  ||||||  |||||||||||| |||| |||||    
T  28599797 tttcatccctgtaaatataagtcatttgaattttcgtctctgaagttacaaatccttccaatctgccattgcaaaatttaatcatttgacttttggtcct 28599698  T
Q  371 aatt 374  Q
    ||||    
T  28599697 aatt 28599694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 8089805 - 8089720
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||||  ||||  |||||||| ||||||||||| ||| | ||||||   ||||||||||||||||| |||| |||||||||    
T  8089805 tataggtcatttgcatttttgtccctgaagttactaatccttccaatctgcccc---aaatattaatcatttgacttttggtcctaatt 8089720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 9959195 - 9959106
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| ||| || ||||||| ||||  ||| |||| |||||||||||  || | |||| || |||||||||||||||||||    
T  9959195 tttcgtccctgcaaatattggtcatttgaattttggtccatgaagttactaatcctttcaatctgccactacaaatattaatcatttgaa 9959106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 22731739 - 22731792
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| ||||| || |||||||||    
T  22731739 tttcatccctgcaaatataggtcatttgaattttcgtccctaaagttactaatc 22731792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 855499 - 855380
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||  |||||||||||||||| || ||  | |||||  |||||||| |||| ||||||||| | |||||||||   |||||||||||||     
T  855499 aaaggcttaaatagacatttcatccctgcaaatagagttc-tttgaaatttcatccatgaagttactaatctttccattttgctattgcaaatattaatt 855401  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||| || |||  ||||||||    
T  855400 attttaaatttgatcctaatt 855380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 14696 - 14593
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||| |||||||    
T  14696 aaagacttaaatatgcatttcattccttcaattataggccatttgatttttcatccctgagcttactaatcctcccattttgcccctataaaaattaatc 14597  T
Q  354 attt 357  Q
    ||||    
T  14596 attt 14593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 357
Target Start/End: Original strand, 13611 - 13709
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||  ||| |||||||||||    
T  13611 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgagcttactaatccttccattttgcccctataaaaattaatcattt 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 1e-36; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 32717203 - 32717093
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||     
T  32717203 cttaaatatgcatttcatccctgtaattataggtcatttgatttttcatccctaaacttactaatccttccattttgcccctgtaaaaattaatcattta 32717104  T
Q  359 aattttcgtcc 369  Q
    || ||||||||    
T  32717103 aaatttcgtcc 32717093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 22736788 - 22736673
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||    
T  22736788 cttaaatatgtttttcatccctgtaattataggtcatttgatttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttg 22736689  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||||||||||||    
T  22736688 aaaattcgtcctaatt 22736673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 29193096 - 29192993
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||     
T  29193096 aaaggcttaaatatgcatttcatccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccatttcgcccctgtaaaaattaatt 29192997  T
Q  354 attt 357  Q
    ||||    
T  29192996 attt 29192993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 45279382 - 45279272
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||    
T  45279382 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttg 45279283  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  45279282 aaagttcgtcc 45279272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 44476054 - 44476166
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || || ||||||||||||     
T  44476054 aaatatgtttttcatccctgtaattatgggccatttgatttttcatccctgaacttactaatcctcccattttgcccccgtaattactaatcatttgaaa 44476153  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  44476154 attcgtcctaatt 44476166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 262 - 374
Target Start/End: Complemental strand, 44482048 - 44481936
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| || || ||||||||||||     
T  44482048 aaatatgcttttcatccctgtaattatgggccatttgatttttcatccatgagcttactaatcctcccattttgcccctgtaattactaatcatttgaaa 44481949  T
Q  362 tttcgtcctaatt 374  Q
     ||||||||||||    
T  44481948 attcgtcctaatt 44481936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 29192040 - 29192147
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| || ||||||||||| ||| ||||||||||| ||     
T  29192040 aaatatgcatttcatccctgtaattataggccatttgatttttcattcctgagcttactaatccttccgttttgcccctgtaaaaattaatcatttaaaa 29192139  T
Q  362 tttcgtcc 369  Q
    ||||||||    
T  29192140 tttcgtcc 29192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 37249204 - 37249311
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||| || || ||||||||||||     
T  37249204 aaatatgcttttcatccctgcaattataggccgtttgatttttcatccctgagcttattaatcctcccattttgcccctgtaattactaatcatttgaaa 37249303  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  37249304 gttcgtcc 37249311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 2944764 - 2944654
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| || || ||||||||||    
T  2944764 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccatccattttgcccctgtaattactaatcatttg 2944665  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  2944664 aaagttcgtcc 2944654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 259 - 369
Target Start/End: Complemental strand, 11026730 - 11026620
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||| || || ||||||||||    
T  11026730 cttaaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaacttaccaatccttccattttgcccctgtaattactaatcatttg 11026631  T
Q  359 aattttcgtcc 369  Q
    ||  |||||||    
T  11026630 aaagttcgtcc 11026620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 45278549 - 45278656
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| || || ||||||||||||     
T  45278549 aaatatgcttttcatccctgtaattataggccgtttgatttttcatccctgaatttactaatccttccattttgcccctgtaattactaatcatttgaaa 45278648  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  45278649 gttcgtcc 45278656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 262 - 369
Target Start/End: Original strand, 48188383 - 48188490
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||     
T  48188383 aaatatgtttttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatccttccattttgcccctgtaattactaatcatttgaaa 48188482  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  48188483 gttcgtcc 48188490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 254 - 369
Target Start/End: Complemental strand, 48189202 - 48189087
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| |||||||| || ||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||| || || |||||    
T  48189202 aaaggcttaaatatgcttttcatccttgtaattataggccgtttgatttttcatccctgagcttactaatccttccattttgcccctgtaattactaatc 48189103  T
Q  354 atttgaattttcgtcc 369  Q
    |||||||  |||||||    
T  48189102 atttgaaagttcgtcc 48189087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 1757402 - 1757301
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||    
T  1757402 cttaaatatgattttcatccctgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttg 1757303  T
Q  359 aa 360  Q
    ||    
T  1757302 aa 1757301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 369
Target Start/End: Complemental strand, 43105920 - 43105822
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| || || ||||||||||||  |||||||    
T  43105920 tttcatccctgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcatttgaaagttcgtcc 43105822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 1741389 - 1741504
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | ||||| |||||||||||||||||||    
T  1741389 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccttgcaaatattaatcatttg 1741488  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  1741489 acttttggtcctaatt 1741504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 2943915 - 2944025
Alignment:
Q  259 cttaaatatgcatttc-atccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    ||||||||||| |||| ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||| |||  ||||||||||    
T  2943915 cttaaatatgcttttctatccctgcaattataggccgtttgatttttcatcc-tgagcttactaatcctcctattttgcccctgtaaaagttaatcattt 2944013  T
Q  358 gaattttcgtcc 369  Q
    |||  |||||||    
T  2944014 gaaagttcgtcc 2944025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 22129020 - 22129123
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    ||||||||| | || ||||||| |||||| ||||| || ||||| ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||    
T  22129020 tttcatccccgtaaatataggctatttgaattttcgtcactgaagttactaatccttccaatttgcccctgcaaatattaatcatttgacttttcgtcct 22129119  T
Q  371 aatt 374  Q
    ||||    
T  22129120 aatt 22129123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 262 - 369
Target Start/End: Complemental strand, 37249892 - 37249786
Alignment:
Q  262 aaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaat 361  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| || || || ||||||||||||     
T  37249892 aaatatgcttttcatcc-tgcaattataggccgtttgatttttcatccctgagcttactaatcctcccattctgcccttgtaattactaatcatttgaaa 37249794  T
Q  362 tttcgtcc 369  Q
     |||||||    
T  37249793 gttcgtcc 37249786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 271 - 369
Target Start/End: Original strand, 1756564 - 1756662
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    |||||||| || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||| || || ||||||||||||  |||||||    
T  1756564 tttcatccttgtaattataggccgtttgatttttcatccatgaacttactaatccttccattttgcccctgtaattactaatcatttgaaagttcgtcc 1756662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 10998255 - 10998140
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| || |||||| |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||||    
T  10998255 cttaaatatgtttttcgtctctgcaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgcccctgcaaatattaatcatttg 10998156  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  10998155 acttttggtcataatt 10998140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 374
Target Start/End: Complemental strand, 55037050 - 55036936
Alignment:
Q  260 ttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    |||||||||  |||| ||||||||| |||||| ||||||| ||||| | | |||| ||||||||||| ||| | ||||||||||||||||||||||||||    
T  55037050 ttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgttcttgaagttactaatccttccaatctgcccctgcaaatattaatcatttga 55036951  T
Q  360 attttcgtcctaatt 374  Q
     |||| |||||||||    
T  55036950 tttttggtcctaatt 55036936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 43105235 - 43105336
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  || ||||| || ||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| || || ||||| ||||    
T  43105235 cttaaatatgttttacatccttgtaattataggccgtttgatttttcatccctgaacttactaatcctttcattttgcccctgtaattactaatcttttg 43105334  T
Q  359 aa 360  Q
    ||    
T  43105335 aa 43105336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 51279228 - 51279348
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| ||||||||| ||||||  |||||| ||||| |||| ||| ||||||||| |  || ||||||||||||||||||||||    
T  51279228 aaaggcttaaatatgtctttcgtccctgcaaatataggttatttgaattttcgtcccagaagttactaatcatttcaatttgcccctgcaaatattaatc 51279327  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  51279328 atttgacttttagtcctaatt 51279348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 55036683 - 55036786
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||||| |||||| ||||||||||| ||| | |||||||||||||||||||||||| |  ||| |||||    
T  55036683 tttcgtccctgcaaatataggtcatttgaattttcattcctgaagttactaatccttccaatctgcccctgcaaatattaatcatttaacctttggtcct 55036782  T
Q  371 aatt 374  Q
    ||||    
T  55036783 aatt 55036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 11312732 - 11312852
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| |||||  || |||||| ||||||| ||||| |||||||| |||| ||||||  || | ||||||||||||||||||||    
T  11312732 aaaggcttaaatatgtctttcgtccctctaaatataggtcatttgaattttcgtccctgaagttaccaatccttgcagtctgcccctgcaaatattaatc 11312831  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  11312832 atttgacttttggtcctaatt 11312852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 40256888 - 40256991
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||| ||||| ||||||  |||||| ||||| |||||||| ||||||||||| ||| | ||||| |||||||||||||||||||| |||| |||||    
T  40256888 tttcgtccatgcaaatataggttatttgaattttcgtccctgaagttactaatccttccaatatgcccttgcaaatattaatcatttgacttttggtcct 40256987  T
Q  371 aatt 374  Q
    ||||    
T  40256988 aatt 40256991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 11025963 - 11026049
Alignment:
Q  283 aattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||||||||| ||  || || ||||||||||||  |||||||    
T  11025963 aattataagccgtttgatttttcatccctgaacttactaatccttccattttgcctctataattactaatcatttgaaagttcgtcc 11026049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 22735403 - 22735476
Alignment:
Q  301 ttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||||| | ||||||||||||||||||||||||||| || || ||||||||||||  ||||||||||||    
T  22735403 ttttcatccctaagcttactaatcctcccattttgcccctgtaattactaatcatttgaaaattcgtcctaatt 22735476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 53037041 - 53037129
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttga 359  Q
    ||||||||||| || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | | ||||||||||||||| ||||||||    
T  53037041 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatatacccctgcaaatattagtcatttga 53037129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 10749332 - 10749435
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| |||||| || |||||| ||||||| ||||| |||||||| ||||||||||| | | | |  ||||||||||||||||||||||| |||| |||||    
T  10749332 tttcgtccctgtaaatataggtcatttgaattttcgtccctgaagttactaatccttctaatctatccctgcaaatattaatcatttgacttttggtcct 10749431  T
Q  371 aatt 374  Q
    ||||    
T  10749432 aatt 10749435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 33458288 - 33458185
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| || || |||||||| ||||||||||| | | | || | ||||||||||||||||||||| |||| |||||    
T  33458288 tttcgtccctgcaaatataggtcatttgaattgtcgtccctgaagttactaatccttctaatctgtcactgcaaatattaatcatttgacttttggtcct 33458189  T
Q  371 aatt 374  Q
    ||||    
T  33458188 aatt 33458185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 288 - 374
Target Start/End: Complemental strand, 22129362 - 22129276
Alignment:
Q  288 taggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||| ||||||| ||||| |||||||| ||||||||||| | | |||||| |||||||||||||| |||||| |||| |||||||||    
T  22129362 taggtcatttgaattttcgtccctgaagttactaatccttcaaatttgcctctgcaaatattaataatttgacttttggtcctaatt 22129276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 10749766 - 10749663
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||| | ||||| |||||||| ||||||||| | ||| | |||| | ||||||||||||||||||| |||| ||| |    
T  10749766 tttcgtccctgcaaatataggtcatttaaattttcgtccctgaagttactaatctttccaatctgcctcagcaaatattaatcatttgacttttggtcat 10749667  T
Q  371 aatt 374  Q
    ||||    
T  10749666 aatt 10749663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 374
Target Start/End: Complemental strand, 24576649 - 24576562
Alignment:
Q  287 ataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| || |||| ||||||||  |||| ||||||||||| ||| | ||||  ||||||||||||||||||||||||| |||||||||    
T  24576649 ataggtcagttgaattttcatctttgaaattactaatccttccaatctgccagtgcaaatattaatcatttgaattttggtcctaatt 24576562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 357
Target Start/End: Complemental strand, 46670610 - 46670539
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||| ||||||| |||||||||||||| |||||||| || |||||||| |  ||||||||||||||||||    
T  46670610 tataggtcatttgaattttcatccctgaagttactaattcttccattttgtcattgcaaatattaatcattt 46670539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 256 - 374
Target Start/End: Complemental strand, 53037412 - 53037294
Alignment:
Q  256 agacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcat 355  Q
    ||||||||||||   |||| || ||| || |||||| ||||||| ||||| |||||  | ||||| |||||  || | ||||||||||||||||||||||    
T  53037412 agacttaaatatatctttcgtctctgtaaatataggtcatttgaattttcgtccctacagttactgatcctttcaatctgcccctgcaaatattaatcat 53037313  T
Q  356 ttgaattttcgtcctaatt 374  Q
    |||| |||| |||||||||    
T  53037312 ttgacttttggtcctaatt 53037294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 10997879 - 10997991
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    |||||||||| ||||  | ||||||| || ||| ||||||| ||||| |||||||| ||||||||||| ||| ||   ||||| ||||||||||||||||    
T  10997879 cttaaatatgtattttgttcctgcaaatacaggtcatttgaattttcgtccctgaagttactaatccttccaatt---ccctgtaaatattaatcatttg 10997975  T
Q  359 aattttcgtcctaatt 374  Q
    | ||||  ||||||||    
T  10997976 acttttgatcctaatt 10997991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 21300340 - 21300393
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| |||||||||||||| |||||||||    
T  21300340 tttcatccctgcaaatataggtcatttgaattttcatccctgaagttactaatc 21300393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 30804196 - 30804115
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||||| | |||||| ||||||||||| ||| | || | ||||||||||||||||||||| |||| |||||||||    
T  30804196 catttgaattttcgttcctgaagttactaatccttccaatctgtcactgcaaatattaatcatttgacttttggtcctaatt 30804115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 374
Target Start/End: Complemental strand, 10749650 - 10749586
Alignment:
Q  310 ctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| ||||||||||| ||| | |||||| ||||||||||||||||||| |||| |||||||||    
T  10749650 ctgaagttactaatccttccaatctgccccagcaaatattaatcatttgacttttggtcctaatt 10749586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 294 - 374
Target Start/End: Complemental strand, 40257220 - 40257140
Alignment:
Q  294 atttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||||| ||||| |||||||| ||||||||| |  || | |||||||||||||||||||||||||| ||||  ||||||||    
T  40257220 atttgaattttcgtccctgaaattactaatcatttcaatctgcccctgcaaatattaatcatttgacttttgatcctaatt 40257140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 30890562 - 30890476
Alignment:
Q  286 tataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaa 372  Q
    |||||| ||||||| |||||||||||||| ||||||||| |  || | |||| |||||||  |||||||||||| |||| |||||||    
T  30890562 tataggtcatttgaattttcatccctgaagttactaatcttttcaatctgccactgcaaaatttaatcatttgactttttgtcctaa 30890476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 374
Target Start/End: Original strand, 46670267 - 46670365
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||||| |||||| ||||||| ||| | ||| |||| ||||||||||| ||| | | || |||||||  |||||||||||| |||| |||||||||    
T  46670267 tccctgcaaatataggtcatttgaatttccgtccttgaatttactaatccttccaatctaccactgcaaaatttaatcatttgacttttggtcctaatt 46670365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 55036846 - 55036793
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  55036846 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 55036793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 372
Target Start/End: Original strand, 20974973 - 20975049
Alignment:
Q  296 ttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaa 372  Q
    |||| ||||| ||| || |||||||||||||||| ||||   ||||||| |||||||||||||| |||| |||||||    
T  20974973 ttgaattttcgtccatgtacttactaatcctcccttttttttcctgcaattattaatcatttgagttttggtcctaa 20975049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 360
Target Start/End: Original strand, 30803845 - 30803949
Alignment:
Q  256 agacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcat 355  Q
    ||||||||||| |  |||| ||||| ||| |||||| ||||||| ||||| || ||||| |||||||| || ||| | || | ||||||||||||||||     
T  30803845 agacttaaataggtctttcgtcccttcaactataggtcatttgaattttcgtctctgaagttactaattcttccaatctgtcactgcaaatattaatcaa 30803944  T
Q  356 ttgaa 360  Q
    |||||    
T  30803945 ttgaa 30803949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 374
Target Start/End: Complemental strand, 11313065 - 11313002
Alignment:
Q  311 tgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    |||| ||||||||||| | | | |||||||||||||| ||||||||||| |||| |||||||||    
T  11313065 tgaagttactaatccttctaatctgcccctgcaaatactaatcatttgacttttggtcctaatt 11313002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 374
Target Start/End: Complemental strand, 21300503 - 21300400
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||| |  |||||| ||||| || ||||| |||||||||||  || | || ||||| ||||||||||||||||| |||| | |||    
T  21300503 tttcgtccctgcaaatatatgttatttgaattttcgtctctgaagttactaatcctttcagtctgtccctgtaaatattaatcatttgacttttggccct 21300404  T
Q  371 aatt 374  Q
    ||||    
T  21300403 aatt 21300400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 360
Target Start/End: Complemental strand, 28310708 - 28310629
Alignment:
Q  281 gcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| |||||| ||||||| | |||  |||| || ||||||||| | ||||||||||  |||||||||||||||||||||    
T  28310708 gcaaatataggtcatttgaatcttcgaccctaaagttactaatctttccattttgccattgcaaatattaatcatttgaa 28310629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 30890243 - 30890310
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| |||||||| ||||| ||||||||| | | ||||||||  || ||||||||||||||||||    
T  30890243 catttgaattttcatctctgaagttactaatctttctattttgccattgtaaatattaatcatttgaa 30890310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 360
Target Start/End: Complemental strand, 21255894 - 21255812
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| |||||  ||||||| ||||| ||| | || |||||||| || ||||||||||  || ||||||||||||||||||    
T  21255894 cctgcaaatatagatcatttgaattttcgtccataaagttactaatgcttccattttgccattgtaaatattaatcatttgaa 21255812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 360
Target Start/End: Original strand, 33989035 - 33989117
Alignment:
Q  278 cctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    ||||||| ||||| || ||||| ||||| | ||| || ||||||||||| ||| | |||| |||||||||||||| |||||||    
T  33989035 cctgcaaatatagaccttttgaattttcgtaccttaagttactaatccttccaatctgccactgcaaatattaattatttgaa 33989117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 10749495 - 10749442
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||| | ||||| |||||||| |||||||||    
T  10749495 tttcatccctgcaaatataggtcatttaaattttcgtccctgaagttactaatc 10749442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Original strand, 21255738 - 21255791
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||| | ||||||| ||||||| |||||| |||||||||    
T  21255738 tttcatccctgcaaatataagtcatttgaattttcattcctgaagttactaatc 21255791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 22129183 - 22129130
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    ||||||||||| || |||||| ||||||| ||||| |||||||| |||||||||    
T  22129183 tttcatccctgtaaatataggtcatttgaattttcgtccctgaagttactaatc 22129130  T

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Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 369
Target Start/End: Original strand, 32716284 - 32716361
Alignment:
Q  292 ccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcc 369  Q
    ||||||||||||| |||| |||  |||||||||||| |||||| ||| || ||| ||||| ||||| || ||||||||    
T  32716284 ccatttgattttttatccttgagtttactaatcctctcattttacccttgtaaaaattaaccatttaaaatttcgtcc 32716361  T

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Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 33989367 - 33989286
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| ||||| ||| |||| ||| ||||||| ||| |||| | || || ||||||||||||||| |||| |||||||||    
T  33989367 catttgaattttcgtccatgaagttagtaatccttccaatttgtcactacagatattaatcatttgacttttggtcctaatt 33989286  T

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Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 374
Target Start/End: Original strand, 21300210 - 21300250
Alignment:
Q  334 tgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||| |||||||||||||||||||| |||| |||||||||    
T  21300210 tgcccatgcaaatattaatcatttgattttttgtcctaatt 21300250  T

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Target: scaffold0182 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 14475 - 14360
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || ||||||||||    
T  14475 cttaaatatgcttttcacccctgtaattataggccatttgatttttcatccctgagcttactaatcctcccattttacccctgcaattactaatcatttg 14376  T
Q  359 aattttcgtcctaatt 374  Q
    ||  ||| ||||||||    
T  14375 aaaattcatcctaatt 14360  T

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Target: scaffold0182; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 13131 - 13251
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||| ||||||||||| || ||||| ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||| || |||||    
T  13131 aaaggcttaaatatgcttttcatccctgtaaatatagaccatttgatttttcatctctgagtttagtaatcctcccattttgcccctgcaattactaatc 13230  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||||  ||||||||||||    
T  13231 atttgaaaattcgtcctaatt 13251  T

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Target: scaffold0018 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 374
Target Start/End: Original strand, 73111 - 73226
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||    
T  73111 cttaaatatgcttttcatccctgtaattatgggccatttgacttttcatccctgagcttactaatcctcccattttgcccctgtaattactaatcatttg 73210  T
Q  359 aattttcgtcctaatt 374  Q
    ||  || |||||||||    
T  73211 aaaatttgtcctaatt 73226  T

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Target: scaffold0206 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 10322 - 10442
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  |||| ||||||||| |||||  ||||||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||||    
T  10322 aaaggcttaaataggtctttcgtccctgcaaatatagatcatttgaattttcgtccctgaagttactaatccttccaatttgcccctgcaaatattaatc 10421  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  10422 atttgacttttggtcctaatt 10442  T

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Target: scaffold0321 (Bit Score: 51; Significance: 5e-20; HSPs: 3)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 372
Target Start/End: Original strand, 10659 - 10777
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| |  ||||| |||||||| |||| ||||||||| ||||| |||||||| ||| |||||||  || | ||||||||||||||||||||    
T  10659 aaaggcttaaataggtctttcacccctgcaaatataagccatttgaattttcgtccctgaaattattaatcctttcaatatgcccctgcaaatattaatc 10758  T
Q  354 atttgaattttcgtcctaa 372  Q
    |||||| |||| |||||||    
T  10759 atttgacttttggtcctaa 10777  T

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Target: scaffold0321; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 11044 - 10929
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| ||||||||| |||||| ||||||| ||||| ||| |||| ||||||||| |  || |  |||||| |||||||||||||||||    
T  11044 cttaaatatgtctttcgtccctgcaaatataggtcatttgaattttcgtccatgaagttactaatcttttcaatccgcccctacaaatattaatcatttg 10945  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| |||||||||    
T  10944 acttttggtcctaatt 10929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 324
Target Start/End: Complemental strand, 10839 - 10786
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatc 324  Q
    |||||||||||||| |||||| ||||||| ||||| |||||||| |||||||||    
T  10839 tttcatccctgcaaatataggtcatttgaattttcgtccctgaagttactaatc 10786  T

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Target: scaffold0279 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 10867 - 10970
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcct 370  Q
    |||| ||||||||| |||||| ||||||| ||||| |||  ||| ||||||||||| ||||||||||  |||||||||||||||||||| ||||  ||||    
T  10867 tttcgtccctgcaaatataggtcatttgaattttcgtccacgaagttactaatccttccattttgccattgcaaatattaatcatttgacttttgatcct 10966  T
Q  371 aatt 374  Q
    ||||    
T  10967 aatt 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 11227 - 11138
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| |||||| || |||||| ||||||| ||||| ||| |||| ||| |||| || ||||||||||  |||||||||||||||||||||    
T  11227 tttcgtccctgtaaatataggtcatttgaattttcgtccttgaagttaataattcttccattttgccattgcaaatattaatcatttgaa 11138  T

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Target: scaffold0201 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 374
Target Start/End: Complemental strand, 14241 - 14160
Alignment:
Q  293 catttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaattttcgtcctaatt 374  Q
    ||||||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||||||||||||| |||| |||||||||    
T  14241 catttgaattttcatcactgaagttactaatccttccaatctgcccctacaaatattaatcatttgacttttggtcctaatt 14160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 374
Target Start/End: Original strand, 13890 - 14010
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| ||||||||||  |||| || ||| || ||||||  |||||| ||||| || || || ||||||||||| |||   | ||||||||||||||||||    
T  13890 aaaggcttaaatatgtctttcgtctctgtaaatataggtaatttgaattttcgtcactcaaattactaatccttccaacctacccctgcaaatattaatc 13989  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  13990 atttgacttttggtcctaatt 14010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 252 - 360
Target Start/End: Original strand, 8428 - 8536
Alignment:
Q  252 agaaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaa 351  Q
    ||||||||||||||| |  |||| || ||  || |||||| ||||||| ||||| |||||||| ||||||||||| ||| | |||| |||||||||||||    
T  8428 agaaagacttaaataggtctttcgtctctttaaatataggtcatttgaattttcgtccctgaagttactaatccttccaatctgccactgcaaatattaa 8527  T
Q  352 tcatttgaa 360  Q
    |||||||||    
T  8528 tcatttgaa 8536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 254 - 374
Target Start/End: Complemental strand, 8819 - 8699
Alignment:
Q  254 aaagacttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatc 353  Q
    |||| |||||||| | ||||| |||||| || |||||| ||||||| ||| |||||  ||| ||| ||||||| ||| |||| | |||||||||||||||    
T  8819 aaaggcttaaataggtatttcgtccctgtaaatataggtcatttgaatttccatccgcgaagttattaatccttccaatttgtcactgcaaatattaatc 8720  T
Q  354 atttgaattttcgtcctaatt 374  Q
    |||||| |||| |||||||||    
T  8719 atttgactttttgtcctaatt 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 14249 - 14338
Alignment:
Q  271 tttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttgaa 360  Q
    |||| ||||||||| |||| | ||||||| ||||| ||| |||  ||||||||||| ||| |||||| |||||||||||||| |||||||    
T  14249 tttcgtccctgcaaatataagtcatttgaattttcgtccttgaggttactaatccttccaatttgccactgcaaatattaataatttgaa 14338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Complemental strand, 14599 - 14518
Alignment:
Q  276 tccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcattt 357  Q
    |||||| || |||||| ||||||| ||||| ||| |||| ||||||||||| | | | |||| ||| |||||||||||||||    
T  14599 tccctgtaaatataggtcatttgaattttcgtccttgaagttactaatccttcaaatctgccactgtaaatattaatcattt 14518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 374
Target Start/End: Complemental strand, 120580 - 120467
Alignment:
Q  259 cttaaatatgcatttcatccctgcaattataggccatttgatttttcatccctgaacttactaatcctcccattttgcccctgcaaatattaatcatttg 358  Q
    ||||||||||  |||| || |||||| |||| | ||||| | ||||| ||||  || ||| ||||||| |||||||| | || |||||||||||||||||    
T  120580 cttaaatatgtctttcgtctctgcaaatatatgtcatttcaattttcgtccc--aagttattaatccttccattttgtcactacaaatattaatcatttg 120483  T
Q  359 aattttcgtcctaatt 374  Q
    | |||| ||| |||||    
T  120482 acttttggtcttaatt 120467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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