View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4978_low_8 (Length: 464)
Name: NF4978_low_8
Description: NF4978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4978_low_8 |
 |  |
|
| [»] scaffold1749 (1 HSPs) |
 |  |  |
|
| [»] scaffold0428 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 33390179 - 33390369
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33390179 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
33390278 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatcacgtac |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
33390279 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataaaattataccatcacgtac |
33390369 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 276 - 437
Target Start/End: Original strand, 25209292 - 25209451
Alignment:
| Q |
276 |
tttgaaataacaagtttggatcgatttaaaatacctttttaaactaagaaaaagcacaatgatgattatatattgacaatgatctaagttactaagaaat |
375 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
25209292 |
tttgaaataacaagtttggatcgatttaaaatacctttttaaacaaagaaaaagcacaatgatgattata--ttgacaatgatctaagttactaagaaat |
25209389 |
T |
 |
| Q |
376 |
ttttgttcatcaagctttctaagatcacaaagtgttgcaaactatacttcaatatatataga |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25209390 |
ttttgttcatcaagctttctaagatcacaaagtgttgtaaactatacttcaatatatataga |
25209451 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 33402721 - 33402906
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
33402721 |
catcaaccaagtccaaaaccaaatgattttttaatgcttctataggagaatcaatcccaactaaatcttttgaaacacatgaagatttgcactccaatat |
33402820 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatca |
201 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| |||||||||||||||||| ||| ||||||||| ||||||||| ||||| |
|
|
| T |
33402821 |
attcattatcttttgaacaatctttttaatctctccagcttgtggcctgaaagttccaaaagttgttcaaaaacattatatcatca |
33402906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 24 - 193
Target Start/End: Complemental strand, 31567093 - 31566925
Alignment:
| Q |
24 |
gagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatatattcatta |
123 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
31567093 |
gagtccaaaagcaaatgattttgtaacgcttctataggagaatcaatcccaactaaatcttttgaaacacatgaagatttgcactccaatatattcatta |
31566994 |
T |
 |
| Q |
124 |
tcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacatta |
193 |
Q |
| |
|
| ||||| |||||||||||||||| | | |||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
31566993 |
ttgtttgagcaatctttttaatctctcaagattgtggcctgaaagtt-aaaaagttgttcaataacatta |
31566925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 33306594 - 33306772
Alignment:
| Q |
17 |
atcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatata |
116 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| |||| | ||||||| ||||||||||||||| |
|
|
| T |
33306594 |
atcaaccgagtccaaaagcaaatgattttttaatgcttctataggagaatcaatcccaactaaatcttttgaaatatatgaagatttgcactccaatata |
33306693 |
T |
 |
| Q |
117 |
ttcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaa---agttcaaaatgttgttcaataacatt |
192 |
Q |
| |
|
|||||||| |||||||||||||||||||| | ||| ||||||||||||| ||||||||| |||||||||||||||| |
|
|
| T |
33306694 |
ctcattatcttttgaacaatctttttaatcactccagcttgtggcctgaaattagttcaaaaagttgttcaataacatt |
33306772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 200
Target Start/End: Original strand, 33059670 - 33059854
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||| | ||||| |||||||| |
|
|
| T |
33059670 |
catcaactgagttcaaaagcaaatgattttgtaatgcttgtataggagaatcaatcccaactaaatcttttgaaacacatgaatatttgcattccaatat |
33059769 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatc |
200 |
Q |
| |
|
||| |||||| |||||||||||| |||||| || | | || ||||||||||||||||||| ||||||| |||||||||| |||| |
|
|
| T |
33059770 |
attgattatcttttgaacaatctctttaatttctctagctagtggcctgaaagttcaaaaaattgttcagtaacattatatcatc |
33059854 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 33642575 - 33642389
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||| | |||| |||||||| ||||| |
|
|
| T |
33642575 |
catcaactgagtccaaaagcaaatgattttgtaatgcttttataggagaatcaatcccaactaaatcttttgaaacacttaaagacttgcactctaatat |
33642476 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatcacgtac |
206 |
Q |
| |
|
||| |||||| |||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||| | |||||||||| |
|
|
| T |
33642475 |
attgattatcttttgaacaatctttttaatctctgcagcttgtggcctgaaa-ttcaa---tttgttcaataacattaaatcatcacgtac |
33642389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 33360186 - 33360371
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||| | ||||| |||||||| |
|
|
| T |
33360186 |
catcaaccgagttcaaaagcaaatgattttgtaatgcttgtataggagaatcaatctcaactaaatcttttgaaacacatgaatatttgcattccaatat |
33360285 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatca |
201 |
Q |
| |
|
||| |||||| ||||||||| || |||||| || | | || ||||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
33360286 |
attgattatcttttgaacaacctctttaatttctctagctagtggcctgaaagttcaaaaagttgttcaataacattatatcatca |
33360371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 206
Target Start/End: Original strand, 33412060 - 33412250
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||| ||||||||||| |||| ||||||| || || |||||||| |
|
|
| T |
33412060 |
catcaaccgagtccaaaagtaaatgattttgtaatacttctatccgagaatttatcccaactaaatcttttgaaatgaatgaagatttacaatccaatat |
33412159 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatcacgtac |
206 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||| |
|
|
| T |
33412160 |
attcattatattttgaacaatctttttaatctctccagcttgtggcctgaaagttcagaaagttgttcaataacattatatcatcacgtac |
33412250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 9168881 - 9169034
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||| |||| |
|
|
| T |
9168881 |
catcaattgagtccaaaagcaaatgattttgtaatgcttctataggagaattaatcccaactaaatcttttgaaacacatgaagatttgcactcc-atat |
9168979 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagtt |
170 |
Q |
| |
|
||||||||| |||| |||||||||||| ||||| || |||||||||||||||| |
|
|
| T |
9168980 |
gttcattatcttttgtacaatctttttagtctcagcagattgtggcctgaaagtt |
9169034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 26 - 206
Target Start/End: Original strand, 33264766 - 33264946
Alignment:
| Q |
26 |
gtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatatattcattatc |
125 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | ||||||| ||| | ||||| ||||| |||||||||||||| ||||| |||||| || |||||||| |
|
|
| T |
33264766 |
gtccaaaaggaaatgattttgtaatgcttctaaacgagaatctatcgcaactaagtcttttgaaacacatgaagatttgcattccaatgtactcattatc |
33264865 |
T |
 |
| Q |
126 |
ctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatcacgtac |
206 |
Q |
| |
|
|||||||||||||||||||||| ||| |||| |||||| |||||||||| || |||||||| |||||| |||||||||| |
|
|
| T |
33264866 |
ttttgaacaatctttttaatctctccagcttgcggcctgtaagttcaaaaaattattcaataatattatatcatcacgtac |
33264946 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 31560774 - 31560628
Alignment:
| Q |
24 |
gagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatatattcatta |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
31560774 |
gagtccaaaagcaaatgattttgtaatgcttctataggagaattaatcccaactaaatcttttgaaacacatgaagatttgtacttcaatatattcatta |
31560675 |
T |
 |
| Q |
124 |
tcctttgaacaatctttttaatctcaccaacttgtggcctgaaagtt |
170 |
Q |
| |
|
|| | ||||||||||||| ||||| | | |||||||||||||||| |
|
|
| T |
31560674 |
tcgtccgaacaatctttttcatctctcgagattgtggcctgaaagtt |
31560628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 33273901 - 33274089
Alignment:
| Q |
18 |
tcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatatat |
117 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||| | |||| | ||||||| ||||| ||||||||||| |||| ||||||||| ||| ||| |||||||| |
|
|
| T |
33273901 |
tcaaccgagtccaaaagtaaatgattttgtaatccgtctaaacgagaatctatcccaactaaatcttttgaaaaacatgaagatttgtacttcaatatat |
33274000 |
T |
 |
| Q |
118 |
tcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacattataccatcacgtac |
206 |
Q |
| |
|
||| ||| |||||||||||||||||||||| ||| |||| |||||| |||||||||| || |||||||| |||||| |||||||||| |
|
|
| T |
33274001 |
tcaagatcgtttgaacaatctttttaatctctccagcttgcggcctgtaagttcaaaaaatttttcaataatattatatcatcacgtac |
33274089 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 193
Target Start/End: Original strand, 33287649 - 33287826
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| || |||||| |||||||| ||||||| |||||||||||||||| |||| | ||||||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
33287649 |
catcaaccgaatccaaatgcaaatgactttgtaaggcttctataggagaattaatcgcaactaaatcttttgaaacccatgaagatttgcactccaatat |
33287748 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagttcaaaatgttgttcaataacatta |
193 |
Q |
| |
|
|||||||||| | ||||||||| || ||||||| || |||||||||| | |||||||| |||||||||||| |||| |
|
|
| T |
33287749 |
attcattatcgtctgaacaatcattctaatctctgcagattgtggcctggacgttcaaaaagttgttcaataatatta |
33287826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 17438801 - 17438647
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| ||||||||||| |||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||| ||||||||| ||||| |||||||| |
|
|
| T |
17438801 |
catcaaccgagtccaaaagtaaatgattttttaatgcttctatacgagaatttatcccaactaaatcttttgaattacatgaagatttgcattccaatat |
17438702 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttttaatctcaccaacttgtggcctgaaagtt |
170 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
17438701 |
attcattatcttttgaacaatctttttaatctctgcacattgtggcctgaaagtt |
17438647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 106 - 231
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| || | |||||| || |||| || |||||||||| || |||||| ||||| ||||||||||| ||||| ||||||| ||||||| |||||| |
|
|
| T |
106 |
catcaaccgaattcaaaagtaactgatgttttaatgcttctgtacgagaatttatcccaactaaatcttttgaaacgaatgaagatttgcacttcaatat |
205 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttt |
141 |
Q |
| |
|
||||| ||| ||||||||||||||| |
|
|
| T |
206 |
attcaagatcgtttgaacaatctttt |
231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 16 - 141
Target Start/End: Original strand, 8867 - 8992
Alignment:
| Q |
16 |
catcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaatat |
115 |
Q |
| |
|
||||||| || | |||||| || |||| || |||||||||| || |||||| ||||| ||||||||||| ||||| ||||||| ||||||| |||||| |
|
|
| T |
8867 |
catcaaccgaattcaaaagtaactgatgttttaatgcttctgtacgagaatttatcccaactaaatcttttgaaacgaatgaagatttgcacttcaatat |
8966 |
T |
 |
| Q |
116 |
attcattatcctttgaacaatctttt |
141 |
Q |
| |
|
||||| ||| ||||||||||||||| |
|
|
| T |
8967 |
attcaagatcgtttgaacaatctttt |
8992 |
T |
 |
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Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 31502073 - 31501940
Alignment:
| Q |
12 |
acatcatcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactcca |
111 |
Q |
| |
|
||||||||||| |||||||| || ||| | |||| |||||||| |||| ||||| |||| || |||| ||||| ||||||||||| || ||||| |||| |
|
|
| T |
31502073 |
acatcatcaacagagtccaagagtaaaagtttttctaatgcttgtatatgagaaacaattccaactatgtcttttgaaacacatgatgagttgcaatcca |
31501974 |
T |
 |
| Q |
112 |
atatattcattatcctttgaacaatctttttaat |
145 |
Q |
| |
|
| ||||| ||||||||||| || || |||||||| |
|
|
| T |
31501973 |
aaatatttattatcctttggacgatatttttaat |
31501940 |
T |
 |
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Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 148
Target Start/End: Complemental strand, 31496903 - 31496768
Alignment:
| Q |
13 |
catcatcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaattgcactccaa |
112 |
Q |
| |
|
|||||| ||| ||||||||||| ||| | |||| |||| || ||| |||| || ||||| |||||||| || ||||||||| ||| ||||| ||||| |
|
|
| T |
31496903 |
catcattaaccgagtccaaaagtaaaagcttttctaatttttgcatatgagagtccatcccaactaaatcatttgaaacacatatagatttgcaatccaa |
31496804 |
T |
 |
| Q |
113 |
tatattcattatcctttgaacaatctttttaatctc |
148 |
Q |
| |
|
|||| |||||||||||||||||| ||||||||||| |
|
|
| T |
31496803 |
aatatccattatcctttgaacaatttttttaatctc |
31496768 |
T |
 |
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Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 31476951 - 31476812
Alignment:
| Q |
12 |
acatcatcaactgagtccaaaagcaaatgattttgtaatgcttctataggagaatcaatccctactaaatctttcgaaacacatgaagaa---ttgcact |
108 |
Q |
| |
|
||||||||||| ||||||||||| ||| | |||| |||| ||| | |||||||||| ||||| |||||||| || ||| ||| |||||| |||| | |
|
|
| T |
31476951 |
acatcatcaacagagtccaaaagtaaaagcttttctaattcttgtctaggagaatccatcccaactaaatcgtttgaagcacttgaagataatttgctgt |
31476852 |
T |
 |
| Q |
109 |
ccaatatattcattatcctttgaacaatctttttaatctc |
148 |
Q |
| |
|
|||| ||| | ||||||| |||||| |||||||||||||| |
|
|
| T |
31476851 |
ccaaaatagttattatccgttgaactatctttttaatctc |
31476812 |
T |
 |
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