View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4980-Insertion-2 (Length: 936)

Name: NF4980-Insertion-2
Description: NF4980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4980-Insertion-2
NF4980-Insertion-2
[»] chr4 (57 HSPs)
chr4 (355-757)||(41134743-41135142)
chr4 (765-908)||(20783329-20783477)
chr4 (758-908)||(17468031-17468186)
chr4 (759-891)||(37779955-37780090)
chr4 (759-878)||(21265395-21265516)
chr4 (758-908)||(47109559-47109716)
chr4 (758-908)||(30868538-30868696)
chr4 (758-880)||(32684769-32684893)
chr4 (759-891)||(18872877-18873014)
chr4 (758-879)||(23390087-23390210)
chr4 (759-891)||(29508965-29509102)
chr4 (759-891)||(53564096-53564233)
chr4 (756-908)||(6656482-6656640)
chr4 (759-879)||(35909817-35909939)
chr4 (756-879)||(24072219-24072344)
chr4 (758-891)||(3085604-3085740)
chr4 (759-880)||(6629216-6629339)
chr4 (758-879)||(7776683-7776806)
chr4 (759-908)||(28501127-28501283)
chr4 (752-879)||(13549154-13549283)
chr4 (762-908)||(26889644-26889795)
chr4 (762-879)||(2507598-2507717)
chr4 (793-908)||(41333825-41333946)
chr4 (758-879)||(30010592-30010714)
chr4 (758-878)||(19596180-19596302)
chr4 (758-851)||(38613582-38613676)
chr4 (106-207)||(54639689-54639790)
chr4 (766-908)||(13498233-13498382)
chr4 (759-851)||(39797593-39797686)
chr4 (104-197)||(18915537-18915629)
chr4 (766-872)||(50621486-50621595)
chr4 (109-207)||(21240132-21240230)
chr4 (794-891)||(38615991-38616090)
chr4 (819-891)||(52180987-52181061)
chr4 (132-205)||(37626970-37627043)
chr4 (809-880)||(5840086-5840158)
chr4 (111-205)||(24157773-24157866)
chr4 (759-826)||(52180292-52180360)
chr4 (131-207)||(52820595-52820671)
chr4 (106-197)||(11123466-11123557)
chr4 (807-876)||(48801408-48801478)
chr4 (758-870)||(54158642-54158756)
chr4 (131-207)||(46695633-46695709)
chr4 (152-207)||(3775389-3775444)
chr4 (133-208)||(22478036-22478111)
chr4 (106-204)||(26009689-26009787)
chr4 (152-197)||(5497795-5497840)
chr4 (159-207)||(52378444-52378492)
chr4 (759-879)||(37776475-37776598)
chr4 (759-879)||(47683263-47683386)
chr4 (106-205)||(51834763-51834862)
chr4 (806-879)||(2615731-2615805)
chr4 (763-879)||(6083459-6083577)
chr4 (131-205)||(20032567-20032640)
chr4 (152-205)||(48051723-48051776)
chr4 (106-183)||(49672068-49672145)
chr4 (806-847)||(50138446-50138487)
[»] chr1 (55 HSPs)
chr1 (759-908)||(27479739-27479895)
chr1 (759-908)||(2636927-2637082)
chr1 (758-891)||(37850176-37850314)
chr1 (759-879)||(17483907-17484029)
chr1 (759-879)||(49549176-49549298)
chr1 (757-908)||(23893435-23893593)
chr1 (756-879)||(38920409-38920534)
chr1 (759-908)||(30996885-30997040)
chr1 (759-908)||(39425570-39425726)
chr1 (759-879)||(15302485-15302606)
chr1 (759-879)||(4279868-4279990)
chr1 (759-879)||(52429062-52429184)
chr1 (774-891)||(27670002-27670123)
chr1 (759-908)||(45810130-45810287)
chr1 (757-879)||(51467211-51467335)
chr1 (759-879)||(29437594-29437716)
chr1 (794-891)||(4389769-4389870)
chr1 (758-879)||(38509087-38509210)
chr1 (768-876)||(39626985-39627095)
chr1 (759-879)||(46271092-46271214)
chr1 (759-879)||(48363752-48363876)
chr1 (759-879)||(19349657-19349783)
chr1 (760-874)||(21290301-21290417)
chr1 (806-880)||(4371554-4371629)
chr1 (767-908)||(41619913-41620062)
chr1 (106-205)||(27262752-27262851)
chr1 (113-204)||(32003023-32003114)
chr1 (794-908)||(35945349-35945469)
chr1 (108-197)||(52698438-52698527)
chr1 (809-908)||(1867246-1867351)
chr1 (130-205)||(26478062-26478137)
chr1 (759-830)||(15911271-15911343)
chr1 (117-205)||(24980830-24980918)
chr1 (117-205)||(24989588-24989676)
chr1 (759-879)||(10383781-10383903)
chr1 (757-891)||(31635868-31636005)
chr1 (794-891)||(1427359-1427460)
chr1 (759-849)||(5854046-5854137)
chr1 (109-204)||(7444921-7445016)
chr1 (806-891)||(33336961-33337048)
chr1 (106-193)||(44529260-44529347)
chr1 (758-860)||(26547701-26547803)
chr1 (106-196)||(44698034-44698124)
chr1 (131-205)||(47235506-47235580)
chr1 (131-205)||(49805977-49806051)
chr1 (129-197)||(9433820-9433888)
chr1 (757-870)||(14171714-14171829)
chr1 (758-879)||(30289601-30289724)
chr1 (765-879)||(43789834-43789949)
chr1 (806-878)||(2606702-2606776)
chr1 (155-189)||(12806991-12807025)
chr1 (759-879)||(23542154-23542276)
chr1 (759-879)||(45039587-45039709)
chr1 (756-879)||(1047989-1048114)
chr1 (757-891)||(22567229-22567368)
[»] scaffold0049 (1 HSPs)
scaffold0049 (756-879)||(16-141)
[»] chr8 (50 HSPs)
chr8 (756-879)||(36941443-36941568)
chr8 (758-908)||(11293794-11293951)
chr8 (758-908)||(43292737-43292892)
chr8 (758-908)||(12802751-12802905)
chr8 (762-908)||(36786608-36786761)
chr8 (759-908)||(29073765-29073917)
chr8 (762-908)||(23894651-23894802)
chr8 (757-891)||(19176851-19176989)
chr8 (758-879)||(26502655-26502778)
chr8 (757-879)||(5244364-5244489)
chr8 (759-905)||(5110025-5110178)
chr8 (759-876)||(44165209-44165328)
chr8 (759-878)||(23424985-23425106)
chr8 (758-908)||(17336559-17336715)
chr8 (498-633)||(12908680-12908815)
chr8 (765-906)||(35179743-35179891)
chr8 (758-908)||(23497871-23498028)
chr8 (758-879)||(23995751-23995874)
chr8 (759-876)||(26625971-26626089)
chr8 (793-891)||(36409756-36409858)
chr8 (113-234)||(13244681-13244797)
chr8 (758-879)||(41898233-41898357)
chr8 (759-880)||(5449606-5449729)
chr8 (106-205)||(32615839-32615938)
chr8 (106-205)||(29912142-29912241)
chr8 (106-193)||(42964789-42964875)
chr8 (106-197)||(41235844-41235930)
chr8 (757-851)||(13143550-13143645)
chr8 (152-205)||(44812782-44812835)
chr8 (758-891)||(45425195-45425331)
chr8 (106-205)||(13521715-13521814)
chr8 (106-205)||(13611250-13611349)
chr8 (106-204)||(41657600-41657698)
chr8 (759-878)||(17856517-17856638)
chr8 (126-187)||(17922087-17922148)
chr8 (759-880)||(23687905-23688029)
chr8 (149-193)||(43471369-43471413)
chr8 (756-880)||(23487236-23487363)
chr8 (758-879)||(29321033-29321156)
chr8 (152-221)||(31331355-31331421)
chr8 (758-878)||(44888856-44888979)
chr8 (133-207)||(7859127-7859201)
chr8 (757-870)||(33865281-33865395)
chr8 (106-207)||(41291443-41291545)
chr8 (159-205)||(43799150-43799196)
chr8 (149-197)||(1883870-1883919)
chr8 (106-183)||(3036505-3036582)
chr8 (106-195)||(24585829-24585918)
chr8 (156-205)||(31082359-31082408)
chr8 (159-204)||(35471572-35471617)
[»] chr5 (37 HSPs)
chr5 (759-891)||(13236101-13236236)
chr5 (756-908)||(23259875-23260034)
chr5 (758-908)||(41686854-41687009)
chr5 (758-879)||(31657859-31657982)
chr5 (758-877)||(21069814-21069935)
chr5 (759-880)||(1303317-1303440)
chr5 (759-879)||(7001477-7001599)
chr5 (756-876)||(8949993-8950115)
chr5 (758-891)||(35784659-35784795)
chr5 (756-908)||(6328540-6328699)
chr5 (757-879)||(24857730-24857854)
chr5 (756-879)||(11432491-11432616)
chr5 (769-908)||(25837149-25837295)
chr5 (758-876)||(16284929-16285049)
chr5 (759-908)||(27834085-27834241)
chr5 (759-879)||(15559712-15559834)
chr5 (769-908)||(28414435-28414580)
chr5 (758-891)||(39971174-39971312)
chr5 (757-874)||(5283227-5283346)
chr5 (802-908)||(16926594-16926705)
chr5 (761-876)||(31642365-31642482)
chr5 (756-891)||(39692391-39692529)
chr5 (758-876)||(18251198-18251318)
chr5 (761-908)||(8356281-8356435)
chr5 (805-878)||(41470821-41470895)
chr5 (116-197)||(20975555-20975636)
chr5 (763-837)||(16636748-16636823)
chr5 (130-205)||(41360897-41360972)
chr5 (113-205)||(13203135-13203227)
chr5 (759-879)||(40004149-40004271)
chr5 (109-207)||(41807234-41807331)
chr5 (756-879)||(186273-186398)
chr5 (107-207)||(6562633-6562732)
chr5 (152-197)||(8611775-8611820)
chr5 (131-205)||(19608804-19608878)
chr5 (758-880)||(7940624-7940749)
chr5 (756-879)||(16127434-16127559)
[»] chr3 (59 HSPs)
chr3 (759-891)||(29719451-29719588)
chr3 (756-908)||(28810858-28811017)
chr3 (754-876)||(32968961-32969085)
chr3 (758-908)||(44561435-44561592)
chr3 (759-908)||(42526365-42526521)
chr3 (757-908)||(1111386-1111544)
chr3 (756-879)||(45404549-45404674)
chr3 (757-906)||(47008240-47008396)
chr3 (759-878)||(12918578-12918699)
chr3 (757-879)||(8379852-8379976)
chr3 (758-908)||(38341091-38341246)
chr3 (757-879)||(48902447-48902571)
chr3 (758-879)||(48904002-48904125)
chr3 (757-891)||(24813746-24813883)
chr3 (757-908)||(27646044-27646202)
chr3 (757-876)||(31541200-31541321)
chr3 (759-882)||(36584877-36585002)
chr3 (762-908)||(21497554-21497707)
chr3 (759-891)||(4564397-4564534)
chr3 (759-908)||(34021735-34021891)
chr3 (759-876)||(34811492-34811610)
chr3 (759-879)||(42043994-42044116)
chr3 (777-906)||(4836451-4836585)
chr3 (756-891)||(17589613-17589753)
chr3 (775-905)||(29447551-29447688)
chr3 (759-879)||(42755516-42755638)
chr3 (758-908)||(54927829-54927987)
chr3 (756-839)||(30820116-30820200)
chr3 (766-845)||(48654992-48655072)
chr3 (766-879)||(28874999-28875113)
chr3 (759-838)||(40214820-40214900)
chr3 (793-906)||(33290489-33290606)
chr3 (761-865)||(52693442-52693547)
chr3 (759-879)||(22494395-22494522)
chr3 (793-879)||(34265499-34265586)
chr3 (149-223)||(24487781-24487851)
chr3 (123-207)||(25985391-25985475)
chr3 (820-891)||(15095358-15095433)
chr3 (119-193)||(31732095-31732169)
chr3 (806-860)||(41392667-41392721)
chr3 (131-205)||(43767318-43767392)
chr3 (131-205)||(53248635-53248709)
chr3 (757-841)||(2801213-2801298)
chr3 (118-198)||(34600792-34600873)
chr3 (106-204)||(15496146-15496244)
chr3 (756-879)||(29383189-29383315)
chr3 (131-207)||(44765132-44765209)
chr3 (758-879)||(14428784-14428907)
chr3 (156-207)||(27473692-27473743)
chr3 (106-197)||(35365199-35365290)
chr3 (806-891)||(49543967-49544056)
chr3 (756-878)||(8503237-8503362)
chr3 (159-205)||(16041426-16041471)
chr3 (794-879)||(41824283-41824369)
chr3 (106-193)||(47077662-47077751)
chr3 (826-879)||(53589464-53589517)
chr3 (758-880)||(20621424-20621549)
chr3 (758-870)||(41750926-41751039)
chr3 (758-880)||(45513375-45513500)
[»] chr7 (53 HSPs)
chr7 (759-908)||(19845407-19845565)
chr7 (758-891)||(27813660-27813798)
chr7 (759-908)||(42887820-42887976)
chr7 (758-891)||(30534865-30535001)
chr7 (759-908)||(45722148-45722307)
chr7 (759-874)||(32643544-32643661)
chr7 (774-908)||(3775970-3776111)
chr7 (762-891)||(33682873-33683005)
chr7 (759-908)||(32964135-32964291)
chr7 (759-880)||(35888484-35888607)
chr7 (759-891)||(49044860-49044997)
chr7 (757-876)||(34693579-34693700)
chr7 (759-908)||(21135389-21135545)
chr7 (759-879)||(47648918-47649040)
chr7 (757-879)||(8781950-8782072)
chr7 (752-879)||(9682776-9682905)
chr7 (759-908)||(3881278-3881437)
chr7 (758-874)||(2345282-2345400)
chr7 (756-891)||(44510081-44510220)
chr7 (758-849)||(19293329-19293421)
chr7 (762-880)||(32699449-32699569)
chr7 (774-879)||(24504859-24504966)
chr7 (759-842)||(40299092-40299176)
chr7 (769-879)||(43934764-43934876)
chr7 (774-879)||(23801938-23802045)
chr7 (802-879)||(6910599-6910677)
chr7 (801-876)||(37915320-37915396)
chr7 (759-842)||(33682629-33682715)
chr7 (794-908)||(22991521-22991640)
chr7 (793-908)||(31802897-31803016)
chr7 (113-196)||(43638968-43639052)
chr7 (116-205)||(8902973-8903063)
chr7 (152-207)||(7711927-7711982)
chr7 (806-879)||(19497420-19497494)
chr7 (759-879)||(34896033-34896155)
chr7 (106-196)||(39258866-39258955)
chr7 (106-207)||(6707600-6707700)
chr7 (152-197)||(22329592-22329637)
chr7 (132-196)||(3237308-3237372)
chr7 (758-876)||(9303828-9303948)
chr7 (149-205)||(47188465-47188521)
chr7 (152-206)||(36586839-36586893)
chr7 (152-205)||(11663013-11663066)
chr7 (116-197)||(24423447-24423528)
chr7 (764-878)||(42298172-42298289)
chr7 (756-876)||(46148609-46148731)
chr7 (107-205)||(38987145-38987243)
chr7 (758-851)||(12631552-12631646)
chr7 (825-878)||(19920737-19920791)
chr7 (118-204)||(49142863-49142949)
chr7 (759-870)||(26842956-26843069)
chr7 (152-197)||(30424892-30424937)
chr7 (106-207)||(34004772-34004873)
[»] chr2 (40 HSPs)
chr2 (758-879)||(30858113-30858236)
chr2 (759-908)||(31633587-31633743)
chr2 (759-908)||(28566292-28566448)
chr2 (757-908)||(6028483-6028641)
chr2 (758-891)||(18970468-18970606)
chr2 (759-879)||(41494362-41494484)
chr2 (757-908)||(40544467-40544625)
chr2 (759-877)||(34431941-34432061)
chr2 (759-876)||(9701248-9701367)
chr2 (758-879)||(21838791-21838914)
chr2 (759-891)||(36750624-36750761)
chr2 (759-879)||(41422687-41422809)
chr2 (758-876)||(11944377-11944497)
chr2 (757-879)||(43700796-43700920)
chr2 (765-891)||(2788084-2788215)
chr2 (757-849)||(13214966-13215059)
chr2 (794-908)||(4408555-4408673)
chr2 (793-879)||(30830118-30830205)
chr2 (779-860)||(27725450-27725532)
chr2 (106-204)||(37426531-37426629)
chr2 (806-908)||(18294134-18294240)
chr2 (106-197)||(11074519-11074610)
chr2 (106-205)||(16011806-16011905)
chr2 (130-205)||(19204405-19204480)
chr2 (757-879)||(1359966-1360090)
chr2 (149-205)||(38788769-38788825)
chr2 (752-880)||(12889942-12890073)
chr2 (759-879)||(16805531-16805653)
chr2 (759-879)||(16844813-16844935)
chr2 (133-207)||(44949251-44949325)
chr2 (825-876)||(3095477-3095529)
chr2 (757-879)||(23789144-23789268)
chr2 (126-197)||(31549752-31549823)
chr2 (152-203)||(31663614-31663665)
chr2 (806-857)||(32978865-32978916)
chr2 (106-205)||(35316150-35316249)
chr2 (806-852)||(44417605-44417651)
chr2 (808-879)||(8867756-8867829)
chr2 (752-879)||(16108208-16108337)
chr2 (806-870)||(22302574-22302639)
[»] scaffold0236 (1 HSPs)
scaffold0236 (759-879)||(17639-17761)
[»] scaffold0294 (1 HSPs)
scaffold0294 (758-908)||(11401-11556)
[»] chr6 (34 HSPs)
chr6 (759-876)||(2364409-2364528)
chr6 (759-879)||(4175417-4175539)
chr6 (759-878)||(13321068-13321189)
chr6 (752-879)||(17992164-17992293)
chr6 (759-891)||(6418392-6418529)
chr6 (759-880)||(8217461-8217584)
chr6 (759-879)||(9038815-9038937)
chr6 (759-879)||(22998785-22998907)
chr6 (759-879)||(23789497-23789619)
chr6 (759-879)||(8345405-8345526)
chr6 (759-879)||(28980595-28980717)
chr6 (758-851)||(8637052-8637148)
chr6 (759-908)||(4823112-4823266)
chr6 (772-880)||(22710438-22710555)
chr6 (758-879)||(28235942-28236065)
chr6 (777-891)||(27581546-27581664)
chr6 (778-908)||(11161992-11162131)
chr6 (756-851)||(29293559-29293654)
chr6 (794-908)||(11200735-11200855)
chr6 (759-908)||(32615128-32615284)
chr6 (794-891)||(14630063-14630162)
chr6 (763-891)||(27310594-27310725)
chr6 (106-196)||(30326677-30326767)
chr6 (758-908)||(33012404-33012561)
chr6 (131-205)||(31597531-31597605)
chr6 (116-205)||(342961-343050)
chr6 (131-223)||(2801303-2801392)
chr6 (113-204)||(24396782-24396873)
chr6 (106-205)||(2817240-2817340)
chr6 (107-210)||(28738471-28738574)
chr6 (756-880)||(31149984-31150111)
chr6 (758-880)||(13866767-13866892)
chr6 (758-891)||(15498789-15498926)
chr6 (758-870)||(16122439-16122552)
[»] scaffold0009 (1 HSPs)
scaffold0009 (759-879)||(246630-246752)
[»] scaffold0043 (1 HSPs)
scaffold0043 (506-640)||(46630-46764)
[»] scaffold0038 (1 HSPs)
scaffold0038 (758-879)||(36104-36227)
[»] scaffold0486 (1 HSPs)
scaffold0486 (793-876)||(537-621)
[»] scaffold0039 (1 HSPs)
scaffold0039 (760-872)||(103804-103918)
[»] scaffold1268 (1 HSPs)
scaffold1268 (149-207)||(1507-1565)
[»] scaffold1267 (1 HSPs)
scaffold1267 (149-207)||(1507-1565)
[»] scaffold0012 (1 HSPs)
scaffold0012 (759-879)||(47815-47937)
[»] scaffold0237 (1 HSPs)
scaffold0237 (758-880)||(6350-6475)


Alignment Details
Target: chr4 (Bit Score: 349; Significance: 0; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 355 - 757
Target Start/End: Original strand, 41134743 - 41135142
Alignment:
Q  355 ttattagaagttaagttttagtattagttatggccttaaacaaggatttgtgatgccttatatttgagttggttcgatatacaactaaagaatgattgat 454  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  41134743 ttattagaagttaagttttagtattagttatggccttaaacaaggatttgtgatgccttatatttgagttggttcgatatacaactaaagaatgattg-- 41134840  T
Q  455 tggkggttgattaatttgcctcttatttaaaaggggactgttatttattgcgagcagttttgtcccgaaagctccgtgaattgcc-gtcgtccaataaaa 553  Q
      | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  41134841 --gtggttgattaatttgcttcttatttaaaaggggactgttatttattgcgagcagttttgtcccgaaagctccgtgaattgcccgtcgtcaaataaaa 41134938  T
Q  554 acttgctctggtcgaaaataagggagtcatgggtgtaagttttggtcaaacttgggatttagtagcattaaaatttcattcaagaaactttggccgaaaa 653  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41134939 acttgctctggtcgaaaataaaggagtcatgggtgtaagttttggtcaaacttgggatttagtagcattaaaatttcattcaagaaactttggctgaaaa 41135038  T
Q  654 tttcattttcctatttaaaatcaatgtaatcctcacatataactatgaagactaatatcttgaggtagttaagatttgtttaagaaattatcgtcttcaa 753  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  41135039 tttcattttcctatttaaaatcaatgtaatcctcacatataattatgaagactaatatcttgaggtagttaagattcgtttaagaagttatcgtcttcaa 41135138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 765 - 908
Target Start/End: Complemental strand, 20783477 - 20783329
Alignment:
Q  765 ctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-att 862  Q
    |||||||| |||||||| ||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||| |||    
T  20783477 ctccgtccctaaatataagaggcttttgccaaaattacggagattaagaaagttggttgcagtattaaatttgtatataattactattatttttacaatt 20783378  T
Q  863 ttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  20783377 ttatccttaagagagagttaatttatgttttcaacataatatttattgt 20783329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 17468186 - 17468031
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||||||||||||  |||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |||    
T  17468186 atactacctccgtccctaaatataggagcatttttcaaaaattacggagattaagaaagttggttgtagtattaaatttatatataattactattgtttt 17468087  T
Q  857 tac-attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  17468086 tacaattttatccttaagagagagttaatttatgttttcaacataatatttattgt 17468031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 37779955 - 37780090
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  37779955 tactacctccgtccctaaatataggagccttttgctaaaattgcggagattaagaaagtttgttgtagtattaaatttgtatataattactattgttttt 37780054  T
Q  858 ac-attttatccttaagagagagt-aatttatgttt 891  Q
    || ||||||||||||||||||||| |||||||||||    
T  37780055 acaattttatccttaagagagagtaaatttatgttt 37780090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 759 - 878
Target Start/End: Complemental strand, 21265516 - 21265395
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  21265516 tactacctccgtccttaaatataggagccttttgccaaaattgcggagattaagaaagttgattgtaatattaaatttgtatataattactattgttttt 21265417  T
Q  858 ac-attttatccttaagagaga 878  Q
    || ||||||||||||| |||||    
T  21265416 acaattttatccttaaaagaga 21265395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 47109559 - 47109716
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||||||||| |||||||||||| |||||||  ||||||||||||||||||||||||||||||||  |||    
T  47109559 atactacctccgtccctaaatataggagccttttgcaaaaattacggagattaggaaagttagttgtagtattaaatttgtatataattactattgtttt 47109658  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||||||||||||||||   ||||| ||||||   ||||||||||||||||    
T  47109659 tacaattttatccttaagagagagagttaattcatgttttcaacataatatttattgt 47109716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 30868538 - 30868696
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||| ||| ||||| |||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||    
T  30868538 atactacctacgttcttaattataggagccttttgcaaaaattacggagattaagaaagttgatt-tagtattaaatttgtatataattactattgtttt 30868636  T
Q  857 tac-attttatccttaagagagag-----taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||||||||||||||||     ||||||||||||   ||||||||||||||||    
T  30868637 tacaattttatccttaagagagagagagttaatttatgttttcaacataatatttattgt 30868696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 32684893 - 32684769
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||| ||||  |||    
T  32684893 atactacctccgtccctaaatataggagtcttttgtcaaaattgcggagattaagaaagttagttgtagtattaaatttgtatataattattattgtttt 32684794  T
Q  857 tac-attttatccttaagagagagt 880  Q
    ||| ||||||||||||||| |||||    
T  32684793 tacaattttatccttaagaaagagt 32684769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 891
Target Start/End: Complemental strand, 18873014 - 18872877
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||  ||||    
T  18873014 tactacctccgtccctaaatataggagccttttgctaaaattacggagattaagaaaatttgttgtagtattaaatttgtataaaattactattgttttt 18872915  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  18872914 acaattttatccttaagagagagagttaatttatgttt 18872877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 23390087 - 23390210
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||  |||    
T  23390087 atactacctccgtccctaaatataggagccttttgctaaaattacggagattaagaaaatttgttgtagtattaaatttgtataaaattactattgtttt 23390186  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  23390187 tacaattttatccttaagagagag 23390210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 891
Target Start/End: Complemental strand, 29509102 - 29508965
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||  ||||    
T  29509102 tactacctccgtctctaaatataggagttttttgccaaaattacggagattaagaaagttggttgtagtattaaatttgtatatagttactattgttttt 29509003  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||| ||||||   ||||||||||||    
T  29509002 acaattttatccttaaaagagagagttaatttatgttt 29508965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 53564096 - 53564233
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||| ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| |||| |||||||||||||  ||||    
T  53564096 tactacatccgtccctaaatataggagccttttgcaaaaattacggagattaagaaagttggttgtagtattaaagttgtgtataattactattgttttt 53564195  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  53564196 acaattttatccttaagagagagaattaatttatgttt 53564233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 756 - 908
Target Start/End: Original strand, 6656482 - 6656640
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |    
T  6656482 atatactaccttcgtccctaattataggagccttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattaatattgtt 6656581  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||| ||||||| ||||||||||||   ||||||||||||   ||||||||||||||||    
T  6656582 tttacaattttat-cttaagagagagagttaatttatgttttcaacataatatttattgt 6656640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 35909939 - 35909817
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||| ||||||||  ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  35909939 tactacctccgtccctaaatatagaagtcttttatcaaaatcgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 35909840  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  35909839 acaattttatccttaagagagag 35909817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 756 - 879
Target Start/End: Original strand, 24072219 - 24072344
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| |||||||| ||| |||||| |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||   |    
T  24072219 atatactacctccgtccctaaatatatgagccttttgaaaaaattacggagattaagaaagttggttgtggtattaaatttgtatataattactatggtt 24072318  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  24072319 tttacaattttatccttaagagagag 24072344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 3085740 - 3085604
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||| || |||| |||||||||||| |||||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  |||    
T  3085740 atactacatctgtccctaaatataggagccttttgtcaaaattgcggagattaagaaagtttgttgtagtattaaatttgtatataattactattgtttt 3085641  T
Q  857 tac-attttatccttaagagagagt-aatttatgttt 891  Q
    ||| ||||||||||| ||||||||| |||||||||||    
T  3085640 tacaattttatccttgagagagagtaaatttatgttt 3085604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 880
Target Start/End: Original strand, 6629216 - 6629339
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| || | |||||| |||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||    
T  6629216 tactacctccgtccctaaatatatgatttttttgctaaaattgcggagattaagaaagttggttgtaatattaaatttgtatataattactattgttttt 6629315  T
Q  858 ac-attttatccttaagagagagt 880  Q
    || |||||||||||||||||||||    
T  6629316 acaattttatccttaagagagagt 6629339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 7776683 - 7776806
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||| ||||| |||| |||||||||||| ||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  |||    
T  7776683 ataccacctcagtccctaaatataggagccttttgccaaaattgcggagattaaaaaagttggttgtagtattaaatttgtatataattactattgtttt 7776782  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  7776783 tacaattttatccttaagagagag 7776806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 28501127 - 28501283
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||||||| |||||| ||||||||||||| |||||||||||  ||||    
T  28501127 tactacctccgtccctaattataggagccttttgcaaaaattacagagattaagaaagttggttgtagcattaaatttgtatgtaattactattgttttt 28501226  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || |||||||||||||||||| |   ||||||||||||   ||||||||||||||||    
T  28501227 acaattttatccttaagagagcgagttaatttatgttttcaacataatatttattgt 28501283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 752 - 879
Target Start/End: Complemental strand, 13549283 - 13549154
Alignment:
Q  752 aaacatatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactat 850  Q
    ||||| ||||||||||||||| |||||||| |||  |||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  13549283 aaacacatactacctccgtccctaaatataagagcattttgccaaaattgtggacattaagaaagttggttgtagtattaaatttgtatataattactat 13549184  T
Q  851 tagttttac-attttatccttaagagagag 879  Q
    |  |||||| ||||||||||||||||||||    
T  13549183 tgtttttacaattttatccttaagagagag 13549154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 762 - 908
Target Start/End: Original strand, 26889644 - 26889795
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||||| ||| |||| ||| ||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||| |||||||||||  ||||||     
T  26889644 tacctccgtccataattatacgagccttttgcaaaaattacgaagattaagaaagttggttgtagtattaaatttatatgtaattactattgtttttaca 26889743  T
Q  860 attttatccttaagagagag-taatttatg--tttcacataatatttattgt 908  Q
    |||||||||||||||| ||| |||||||||  ||| ||||||||||||||||    
T  26889744 attttatccttaagagggagttaatttatgtttttaacataatatttattgt 26889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 762 - 879
Target Start/End: Original strand, 2507598 - 2507717
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgcaaaatt-acggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||| |||||||||||||||| ||||||||||||| | ||||||||||||| ||| ||||||||||||||||||||||||||| ||||  ||||||     
T  2507598 tacctccatccttaaatataggagccttttgcaaaatttatggagattaagaaaattggttgtagtattaaatttgtatataattattattgattttaca 2507697  T
Q  860 attttatccttaagagagag 879  Q
    |||||||||||||| |||||    
T  2507698 attttatccttaagtgagag 2507717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 793 - 908
Target Start/End: Original strand, 41333825 - 41333946
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatg 888  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||| |||||||| |||||||||||   |||||||||    
T  41333825 caaaattacggagattaagaaagttggttgtagtattaaatttgtatataattattattgtttttacaattttatctttaagagagagagttaatttatg 41333924  T
Q  889 ttt--cacataatatttattgt 908  Q
    |||   ||||||||||||||||    
T  41333925 ttttcaacataatatttattgt 41333946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 30010592 - 30010714
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||| ||||||||||||| ||| |||||| |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  30010592 atactacctc-gtccttaaatatatgagccttttgtcaaaattgtggaaattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 30010690  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||| ||||||||    
T  30010691 tacaattttatccttgagagagag 30010714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 758 - 878
Target Start/End: Original strand, 19596180 - 19596302
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||| ||||||  ||||||||| ||  |||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||  |||    
T  19596180 atactacatccgtctctaaatatagaagcattttgccaaaattacggagaataagaaagttggttgtagtattaaatttgtatataactactattgcttt 19596279  T
Q  857 tac-attttatccttaagagaga 878  Q
    ||| |||||||||||||||||||    
T  19596280 tacaattttatccttaagagaga 19596302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 758 - 851
Target Start/End: Complemental strand, 38613676 - 38613582
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactatt 851  Q
    ||||||| ||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  38613676 atactacttccgtccctaaatataggagtcttttgtaaaaattactgagattaagaaagttgattgtagtattaaatttatatataattattatt 38613582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 54639790 - 54639689
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||||||||||| ||||||||||||| |||   || |||||||||||| ||||||||||||||| |||| ||||||||||||| ||||||    
T  54639790 tttaaagtagaaattttattttgggatttgtgtattgaacaaattgaaacatcaaaaagcaactttttctacatgaaagctatcaattgttttcattttt 54639691  T
Q  206 aa 207  Q
    ||    
T  54639690 aa 54639689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 766 - 908
Target Start/End: Original strand, 13498233 - 13498382
Alignment:
Q  766 tccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attt 863  Q
    ||||||| |||||||| ||| ||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||||   ||||| ||||    
T  13498233 tccgtccctaaatatatgagccttttgcaaaaattacggagaaaaagaaagttggttgtagtattaaatttgtatataattactattgtatttacaattt 13498332  T
Q  864 tatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||||||| | ||||   ||||||||||||   ||||||||||||||||    
T  13498333 tatccttaaaaaagagagttaatttatgttttcaacataatatttattgt 13498382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 759 - 851
Target Start/End: Complemental strand, 39797686 - 39797593
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactatt 851  Q
    |||||||||||||| ||||||||||||   ||||| |||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39797686 tactacctccgtccctaaatataggagcactttgccaaaattgcagagattaagaaagttggttgtagtattaaatttgtatataattactatt 39797593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 104 - 197
Target Start/End: Original strand, 18915537 - 18915629
Alignment:
Q  104 actttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||| |||||||||||||||||||||| |||||||||| |   ||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  18915537 actttaaattagaaattttattttaggatttatgtattcaacataa-aaaacatcaaaaaacaattttttttacataaaaattatcaattgttt 18915629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 766 - 872
Target Start/End: Original strand, 50621486 - 50621595
Alignment:
Q  766 tccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgta-tataattactattagttttac-att 862  Q
    ||||||| |||||||||||  ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||| ||||  |||||| |||    
T  50621486 tccgtccctaaatataggaaccttttgccaaaattacggagattaataaagttggttgtagtattaaatttgtactataattattattgtttttacaatt 50621585  T
Q  863 ttatccttaa 872  Q
    ||||||||||    
T  50621586 ttatccttaa 50621595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 21240132 - 21240230
Alignment:
Q  109 aaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||||| ||||||| |||||||| ||||||||   || ||| || ||||||||||||||||||| | |||||||||||||||||  ||||||||    
T  21240132 aaagtagaaatattattttgggatttgtatattcaacacattgaaatattaaaaaacaactttttctacgtgaaagttatcaattgtttccatttttaa 21240230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 794 - 891
Target Start/End: Complemental strand, 38616090 - 38615991
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagag-agtaatttatgttt 891  Q
    |||||| |||| ||||||||||||  ||||| |||||||||||| |||||||||||||| |||||| |||||||| ||||| ||| | ||||||||||||    
T  38616090 aaaattgcggaaattaagaaagttagttgtaatattaaatttgtttataattactattatttttacaattttatctttaagggagaattaatttatgttt 38615991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 819 - 891
Target Start/End: Original strand, 52180987 - 52181061
Alignment:
Q  819 attgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag-taatttatgttt 891  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||| |||||||| ||||||||||||    
T  52180987 attgtagtattaaatttatatataattactattgtttttacaattttatccttgagagagagttaatttatgttt 52181061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 37626970 - 37627043
Alignment:
Q  132 tttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||   || |||||| |||||  |||||||||||||||||||||||||||||||| |||||||    
T  37626970 tttgtgtattcaacacatttaaacattaaaaagtaactttttctacataaaagttatcaattgtttctattttt 37627043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 809 - 880
Target Start/End: Original strand, 5840086 - 5840158
Alignment:
Q  809 aagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagagt 880  Q
    ||||||||||||  || |||||||||||| |||||||| ||||| |||||| |||||||||||||||||||||    
T  5840086 aagaaagttgataataatattaaatttgtttataattattattatttttacaattttatccttaagagagagt 5840158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 24157866 - 24157773
Alignment:
Q  111 agtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaacttt-ttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||| | | |||||||||||||   ||||||||||||||| ||||||| ||||  || ||||||||||||| |||||||||||    
T  24157866 agtagaaattttatttttgaacttgtgtattcaacacattaaaacatcaaaaagcaactttattct--atgaaagttatcaattatttttattttt 24157773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 759 - 826
Target Start/End: Original strand, 52180292 - 52180360
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagt 826  Q
    |||||||||||| | |||||||| ||| ||||||||||| || ||||||||||||||||||||||||||    
T  52180292 tactacctccgttcctaaatatatgagccttttgcaaaaattgcggagattaagaaagttgattgtagt 52180360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 52820671 - 52820595
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||| |||||| | || || ||||||||||||| ||||| |||||||||||||| ||||||||| ||||||||    
T  52820671 atttgtgtgttcaacatattgaagcatcaaaaaacaattttttatacataaaagttattaattgttttcatttttaa 52820595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 11123466 - 11123557
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||  |||||||||  ||| ||||||||||||||| | ||||||||||||||| |||  ||||||||||| || |||| ||||||||    
T  11123466 tttaaagtgaaaattttatcatagaatttgtgtattcaacatattaaaacatcaaaaatcaatcttttctacatagaaattattaattgttt 11123557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 807 - 876
Target Start/End: Original strand, 48801408 - 48801478
Alignment:
Q  807 ttaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagaga 876  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||   |||||| |||||||||||||||||    
T  48801408 ttaagaaagttgatggtaatattaaatttgtatataattattatagtttttacaattttatccttaagaga 48801478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 758 - 870
Target Start/End: Original strand, 54158642 - 54158756
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||| |||||||||||| || ||||||| | |||| | ||| ||| | ||| ||| | |||||||||||||||| | |||||||||||| |||    
T  54158642 atactacctccatccttaaatataagaatcttttggccaaatcatggaaattgaaaaaattggtggtagtattaaatttgtttgtaattactattatttt 54158741  T
Q  857 tac-attttatcctt 870  Q
    ||| |||||||||||    
T  54158742 tacaattttatcctt 54158756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 46695633 - 46695709
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||||||| | | |||||||||||||||| || ||||| ||||||||| ||||| ||| ||| |||||||||    
T  46695633 atttgtgtattcagcatattaaaacatcaaaaaataattttttatacataaaaattatcgattatttctatttttaa 46695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 3775389 - 3775444
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||  |||||||    
T  3775389 aaacatcaaaaaacaacattttctacataaaaactatcaattgttttcttttttaa 3775444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 22478036 - 22478111
Alignment:
Q  133 ttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaat 208  Q
    |||||||||||||   || ||| | |||||| ||||||||||| |||||||||||||||||||||  |||||||||    
T  22478036 ttgtgtattcaacacattgaaataacaaaaaccaactttttctccataaaagttatcaattgtttccatttttaat 22478111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 26009787 - 26009689
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    ||||||||| ||| ||||| || | ||||||||||||||  | || ||| || ||||| ||||||||| ||||||||||||| ||||| ||| ||||||    
T  26009787 tttaaagtaaaaactttatcttggaatttgtgtattcaaaatattgaaatattaaaaagcaactttttatacataaaagttagcaattatttctatttt 26009689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 5497795 - 5497840
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||||||  |||||||||||||||||||||||||| |||||    
T  5497795 aaacatcaaaaagtaactttttctacataaaagttatcaactgttt 5497840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 52378492 - 52378444
Alignment:
Q  159 aaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||| |||||||| ||||| ||||||||||||| |||||||||||||    
T  52378492 aaaaaaaaactttttttacattaaagttatcaattatttttatttttaa 52378444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 37776475 - 37776598
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||| ||||| ||||||| |||||||  ||||| ||||  ||||||||||| |||  | ||||||||| ||| | |||||| ||||  ||||    
T  37776475 tactacctccgttcttaattataggactcttttgaaaaaataacgggaattaagaaagtggatatttgtattaaatatgtttgtaattaatattgttttt 37776574  T
Q  858 ac-attttatcc-ttaagagagag 879  Q
    || ||||||||| |||||||||||    
T  37776575 acaattttatcctttaagagagag 37776598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 47683386 - 47683263
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaatta-cggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| |||||||  |||||| |||| || |||  ||||||| ||| |||  ||||||||||| ||| |  ||||||||||| ||||    
T  47683386 tactacctccgtccctaattataggatccttttgaaaaaataacgggaattaagatagtggatattagtattaaatatgtttgcaattactattattttt 47683287  T
Q  858 ac-attttatcc-ttaagagagag 879  Q
    || ||||||||| |||||||||||    
T  47683286 acaattttatcctttaagagagag 47683263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 51834862 - 51834763
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| | ||||||||| ||   |||||||||||||||   || ||||| |||||| ||||||| ||||||| |||||||||| || ||| |||||||    
T  51834862 tttaaagcaaaaattttatcttgaaatttgtgtattcaactcgttgaaacaccaaaaagcaactttatctacatgaaagttatcatttatttctattttt 51834763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 879
Target Start/End: Original strand, 2615731 - 2615805
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttaca-ttttatccttaagagagag 879  Q
    |||||||||||||||  | |||||||| |||| | |||| ||||||  ||||||| |||||||||||||||||||    
T  2615731 attaagaaagttgatatttgtattaaagttgtttgtaatcactattgtttttacaattttatccttaagagagag 2615805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 763 - 879
Target Start/End: Complemental strand, 6083577 - 6083459
Alignment:
Q  763 acctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttaca- 860  Q
    ||||||||||||| ||||| || |||||||  ||||||||||  ||||||||||| |||  |  ||||||| |||| | ||| |||||||  |||||||     
T  6083577 acctccgtccttatatataagactcttttgttaaaattacgggaattaagaaagtggatatttatattaaagttgtttgtaagtactattgtttttacag 6083478  T
Q  861 ttttatccttaagagagag 879  Q
    ||||||| |||||||||||    
T  6083477 ttttatctttaagagagag 6083459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 20032567 - 20032640
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||||   || |||||| |||||  || ||||| ||||||||||||||||||||||| |||||||    
T  20032567 atttgtgtattcaacggattgaaacattaaaaagtaatttttt-tacataaaagttatcaattgtttctattttt 20032640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 48051723 - 48051776
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||| ||||||  |||||||||||||||||| ||||||||| ||| |||||||    
T  48051723 aaacaacaaaaagtaactttttctacataaaatttatcaattatttctattttt 48051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 49672145 - 49672068
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaa 183  Q
    ||||||||||||| |||||  ||| | |||| ||||||||||||||||| |  |||||| || |||||| ||||||||    
T  49672145 tttaaagtagaaactttatcctagaaattgtatattcaaccttttaaaataataaaaaataattttttcaacataaaa 49672068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 806 - 847
Target Start/End: Original strand, 50138446 - 50138487
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattac 847  Q
    ||||||||||||| | ||| ||||||||||||||||||||||    
T  50138446 attaagaaagttggtggtaatattaaatttgtatataattac 50138487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 1e-46; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 27479895 - 27479739
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  27479895 tactacctccgtccctaaatataggagtcttttgtcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattgttttt 27479796  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || |||||||||||||||| |||   ||||||||||||   ||||||||||||||||    
T  27479795 acaattttatccttaagagggaggattaatttatgttttcaacataatatttattgt 27479739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 2636927 - 2637082
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttta 858  Q
    ||||||||| |||| ||||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||    
T  2636927 tactacctctgtccctaaatatagtagccttttgaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttta 2637026  T
Q  859 -cattttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
      ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  2637027 taattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 2637082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 758 - 891
Target Start/End: Original strand, 37850176 - 37850314
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||  |||    
T  37850176 atactacctccgtccctaaatataggagccttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtgtataattactattgtttt 37850275  T
Q  857 tac-attttatccttaagagagag---taatttatgttt 891  Q
    | | ||||||||||||||||||||   ||||||||||||    
T  37850276 tgcaattttatccttaagagagagaattaatttatgttt 37850314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 17484029 - 17483907
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||  ||||    
T  17484029 tactacctccgtccctaaatataggagccttttgccaaaattgcggagattaagaaaattggttgtagtattaaatttgtatataattactattgatttt 17483930  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  17483929 acaattttatccttaagagagag 17483907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 49549298 - 49549176
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||| ||| ||| ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  49549298 tactacttccctccctaaatataggagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 49549199  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  49549198 acaattttatccttaagagagag 49549176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 757 - 908
Target Start/End: Original strand, 23893435 - 23893593
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    ||||||| ||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||  ||    
T  23893435 tatactatctctgtccctaaatataggagtcttttgtcaaaattacagagattaagaaagttggttgtaatattaaatttgtatataattaccattgttt 23893534  T
Q  856 ttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  23893535 ttacaattttatccttaagagagagaattaatttatgttttcaacataatatttattgt 23893593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 38920534 - 38920409
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||| ||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||  |    
T  38920534 atatactccctccgtccctaaatataggagccttttgctaaaattgcggagattaagaaagttggttgtagtattaaatttttatataattactattgtt 38920435  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  38920434 tttacaattttatccttaagagagag 38920409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 30997040 - 30996885
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  30997040 tactacctc-gtccctaaatataggagtcttttgccaaaattacggagactaagaaagttgattgtaatattaaatttgtatataattactattgttttt 30996942  T
Q  858 a-cattttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |  ||||||||||||||||||||   ||||||| ||||   ||||||||||||||||    
T  30996941 ataattttatccttaagagagaggattaatttacgttttcaacataatatttattgt 30996885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 39425570 - 39425726
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaatta-cggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||| ||||||||||||   |||||||||| || || ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  39425570 tactacctccgtcattaaatataggatctttttgcaaaaataacgcagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 39425669  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  39425670 acaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 39425726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 15302485 - 15302606
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||| |||||||| ||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||    
T  15302485 tactacatccgtcct-aaatataggagacttttgccaaaattgcggagattaagaaaattggttgtagtattaaatttgtatataattactattattttt 15302583  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  15302584 acaattttatccttaagagagag 15302606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 4279868 - 4279990
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||| |||| |||||||||||||||||||| |||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||  ||||    
T  4279868 tactacctctgtccctaaatataggagtcttttgccaaaattgcagagattaagaaagttggttgtagtattaaatttatatataattactattgttttt 4279967  T
Q  858 ac-attttatccttaagagagag 879  Q
    || |||||||||||||| |||||    
T  4279968 acaattttatccttaagcgagag 4279990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 52429184 - 52429062
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| |||  |||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||||    
T  52429184 tactacctccgtccctaaatataagagctttttgccaaaattgcggagattaataaagttggttgtagtattaaatttgtatataattactattgttttt 52429085  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  52429084 acaattttatccttaagagagag 52429062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 774 - 891
Target Start/End: Complemental strand, 27670123 - 27670002
Alignment:
Q  774 taaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactatt-agttttac-attttatcctt 870  Q
    ||||||||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||    
T  27670123 taaatataggagctttttgcaaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattgttttttacaattttatcctt 27670024  T
Q  871 aagagagag-taatttatgttt 891  Q
    || |||||| ||||||||||||    
T  27670023 aaaagagagttaatttatgttt 27670002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 45810287 - 45810130
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||| || ||||| ||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||    
T  45810287 tactatcttcgtccctaattataggagccttttgcaaaaattaccgagattaagaaagttgattgtagtattaaatttatatataattactattattttt 45810188  T
Q  858 ac-attttatcctt---aagagagag-taatttatgttt--cacataatatttattgt 908  Q
    || |||||||||||   | ||||||| ||||||||||||   ||||||||||||||||    
T  45810187 acaattttatcctttaaaggagagagttaatttatgttttcaacataatatttattgt 45810130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 757 - 879
Target Start/End: Original strand, 51467211 - 51467335
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| |||||||   || ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  51467211 tatactacctccgtccctaaatatcttagccttttgctaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttt 51467310  T
Q  856 tta-cattttatccttaagagagag 879  Q
    |||  ||||||||||||||||||||    
T  51467311 ttataattttatccttaagagagag 51467335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 29437594 - 29437716
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| ||  |||||||||||||||| |||| ||||||||||  ||||    
T  29437594 tactacctccgtccctaaatataggagccttttgctaaaattacggagattaagaaaatttgttgtagtattaaatttttataaaattactattgttttt 29437693  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||| ||||||    
T  29437694 acaattttatccttaatagagag 29437716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 794 - 891
Target Start/End: Complemental strand, 4389870 - 4389769
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgt 889  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||   ||||||||||    
T  4389870 aaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttttacaattttatccttaagagagagagttaatttatgt 4389771  T
Q  890 tt 891  Q
    ||    
T  4389770 tt 4389769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 38509210 - 38509087
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| | |||||| |||||||||  |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  38509210 atactacctccgtcccttaatatatgagtcttttatcaaatttgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 38509111  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| |||| |||||||| ||||||    
T  38509110 tacaatttcatccttaaaagagag 38509087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 768 - 876
Target Start/End: Original strand, 39626985 - 39627095
Alignment:
Q  768 cgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-atttta 865  Q
    ||||| |||||||||||  ||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||||||||  |||||| ||||||    
T  39626985 cgtccctaaatataggaaccttttgcaaaaattacggagattaagaaagtaggttgtagtattaaatttatatataattactattgtttttacaatttta 39627084  T
Q  866 tccttaagaga 876  Q
    |||||||||||    
T  39627085 tccttaagaga 39627095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 46271092 - 46271214
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| |||||||| ||||||| |||||| || ||||||||||| ||| || |||||||||||||||||||||||||||||  ||||    
T  46271092 tactacctccgtccctaagtataggagccttttgccaaaattgcgtagattaagaaatttggttatagtattaaatttgtatataattactattgttttt 46271191  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||| ||||||||||||    
T  46271192 acaattttattcttaagagagag 46271214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 48363752 - 48363876
Alignment:
Q  759 tactacctccgtccttaaatataggagt--cttttgcaaaatta-cggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||| ||| ||||||||||||   ||||||| |||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||  ||    
T  48363752 tactacctccatccctaaatataggagagccttttgccaaatttgcggagattaagaaagttggtagtagtattaaatttgtatataattactattgttt 48363851  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  48363852 ttacaattttatccttaagagagag 48363876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 19349783 - 19349657
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattg----tagtattaaatttgtatataattactattag 853  Q
    |||||||| ||||||||||||||||||  |||||||||| ||| |||||||| |||||||| |||    | ||||||||||||||||||||||||||||     
T  19349783 tactaccttcgtccttaaatataggagcattttgcaaaaattagggagattaggaaagttggttggttgttgtattaaatttgtatataattactattat 19349684  T
Q  854 ttttac-attttatccttaagagagag 879  Q
     ||||| ||||||| ||||||||||||    
T  19349683 gtttacaattttatacttaagagagag 19349657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 760 - 874
Target Start/End: Complemental strand, 21290417 - 21290301
Alignment:
Q  760 actacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttta 858  Q
    ||||||||| ||  |||||||| ||| ||||||||||| || |||||||||||||| ||| ||||| ||||||||||||||||||||||||||  |||||    
T  21290417 actacctccatcactaaatatatgagccttttgcaaaaattgcggagattaagaaaattggttgtaatattaaatttgtatataattactattgttttta 21290318  T
Q  859 -cattttatccttaaga 874  Q
      |||||||||||||||    
T  21290317 taattttatccttaaga 21290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 806 - 880
Target Start/End: Original strand, 4371554 - 4371629
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagagt 880  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||  |||||| |||||||||||||||||||||    
T  4371554 attaagaaagttggttgtaatattaaatttgtatataattactattgtttttacaattttatccttaagagagagt 4371629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 767 - 908
Target Start/End: Original strand, 41619913 - 41620062
Alignment:
Q  767 ccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatata---attactattagttttac-at 861  Q
    |||||| ||||||||||||  || ||||||| || | |||||||| ||||||| |||||||||||||||||||||||   | |||||||  |||||| ||    
T  41619913 ccgtccctaaatataggagctttatgcaaaaattgctgagattaaaaaagttgtttgtagtattaaatttgtatatagttactactattgtttttacaat 41620012  T
Q  862 tttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    |||||| ||||||||||| ||||||||||||   ||||||||||||||||    
T  41620013 tttatctttaagagagagttaatttatgttttcaacataatatttattgt 41620062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 27262851 - 27262752
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||| | |||||||| | |||| |||||||||||||||   ||||||||| |||||  || ||||||||||||||||||||||||||||| |||||||    
T  27262851 tttaaaatggaaattttgtcttagaatttgtgtattcaacacattaaaacattaaaaagtaattttttctacataaaagttatcaattgtttctattttt 27262752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 32003023 - 32003114
Alignment:
Q  113 tagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    ||||||| ||||||| ||||||| ||||||||| | || ||| |||||||||||| ||||||||||||| | ||||||||||||| ||||||    
T  32003023 tagaaatcttattttgggatttgcgtattcaacatattgaaatatcaaaaaacaattttttctacataagatttatcaattgtttctatttt 32003114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 794 - 908
Target Start/End: Complemental strand, 35945469 - 35945349
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttta-cattttatccttaagagag---agtaatttatgt 889  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| |||||| ||||  |||||  ||||||||||||||| ||   | ||||||||||    
T  35945469 aaaatttcggagattaagaaagttggttgtagtattaaatttgtatgtaattattattgtttttataattttatccttaagaaagaaaattaatttatgt 35945370  T
Q  890 tt--cacataatatttattgt 908  Q
    ||   ||||||||||||||||    
T  35945369 tttcaacataatatttattgt 35945349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 108 - 197
Target Start/End: Original strand, 52698438 - 52698527
Alignment:
Q  108 taaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||||||||| | || ||| |||||||||||||   || ||| | |||||||||||||||||| |||||||||||||||||||||    
T  52698438 taaagtagaaattttttcttgggaattgtgtattcaacacattgaaataacaaaaaacaactttttctccataaaagttatcaattgttt 52698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 809 - 908
Target Start/End: Original strand, 1867246 - 1867351
Alignment:
Q  809 aagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgttt--cacataatatt 902  Q
    |||||||||| || ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||   ||||||||||||   ||||||||||    
T  1867246 aagaaagttggttatagtattaaatttgtatataagtactattggttttacaattttatccttaagaaatagagttaatttatgttttcaacataatatt 1867345  T
Q  903 tattgt 908  Q
    ||||||    
T  1867346 tattgt 1867351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 26478062 - 26478137
Alignment:
Q  130 gatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||| |||||   |||||||||||||||| |||||||||||||||||| ||||||||||||  |||||||    
T  26478062 gatttgtgtactcaacacattaaaacatcaaaaaataactttttctacataaaaattatcaattgttcctattttt 26478137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 759 - 830
Target Start/End: Complemental strand, 15911343 - 15911271
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtatta 830  Q
    |||||| ||||||| |||||||||||| ||||||| |||||| |||||||||||||||||| |||| ||||||    
T  15911343 tactacttccgtccctaaatataggagccttttgcaaaaattgcggagattaagaaagttggttgtggtatta 15911271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 24980918 - 24980830
Alignment:
Q  117 aattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||| |||| |||||||||||||||   || ||||| |||||| ||||||  ||||||||||| ||||||||||||| |||||||    
T  24980918 aattttatcttagaatttgtgtattcaacacattgaaacaacaaaaagcaacttaatctacataaaaattatcaattgtttatattttt 24980830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 117 - 205
Target Start/End: Complemental strand, 24989676 - 24989588
Alignment:
Q  117 aattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||| |||| |||||||||||||||   || ||||| |||||| ||||||  ||||||||||| ||||||||||||| |||||||    
T  24989676 aattttatcttagaatttgtgtattcaacacattgaaacaacaaaaagcaacttaatctacataaaaattatcaattgtttatattttt 24989588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 10383781 - 10383903
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||| ||||| |||||||||| || |||||| | ||||| ||||| ||||||||||| |||  |  |||||||||||| | |||| ||||||  ||||    
T  10383781 tactacatccgtacttaaatataagactctttttctaaaatcacggaaattaagaaagtggatatttatattaaatttgtttgtaatcactattgttttt 10383880  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  10383881 acaattttatccttaagagagag 10383903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 757 - 891
Target Start/End: Original strand, 31635868 - 31636005
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    ||||||||||| |||| ||| |||| || | |||||| ||||||||||  |||||||||||  ||  | |||||||| |||| |||||| ||||||  ||    
T  31635868 tatactacctcggtccctaattataagacttttttgctaaaattacgggaattaagaaagtgaatatttgtattaaagttgtttataatcactattgttt 31635967  T
Q  856 ttaca-ttttatccttaagagagag-taatttatgttt 891  Q
    ||||| |||||||||||| |||||| ||||||||||||    
T  31635968 ttacaattttatccttaaaagagagttaatttatgttt 31636005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 794 - 891
Target Start/End: Complemental strand, 1427460 - 1427359
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgt 889  Q
    ||||| ||||| ||||||||| ||||| ||  || |||||||||   ||||||||||| ||||||| ||||||||||||||||||||   ||||||||||    
T  1427460 aaaataacggaaattaagaaaattgatagtgataataaatttgttggtaattactattggttttacaattttatccttaagagagagagttaatttatgt 1427361  T
Q  890 tt 891  Q
    ||    
T  1427360 tt 1427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 759 - 849
Target Start/End: Original strand, 5854046 - 5854137
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattacta 849  Q
    |||||||||||||| ||| ||||  | |||||||| ||||| ||||| |||||||||||||||| ||  ||||||||||| ||||| |||||    
T  5854046 tactacctccgtccctaattatatcactcttttgccaaaatcacggaaattaagaaagttgattataacattaaatttgtttataaatacta 5854137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 204
Target Start/End: Original strand, 7444921 - 7445016
Alignment:
Q  109 aaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||| ||||| ||||| ||  ||||||||||||||||   || ||| |||||||| ||||||||| ||||| ||||||||||||| ||| ||||||    
T  7444921 aaagaagaaactttatcttgagatttgtgtattcaacacattgaaatatcaaaaagcaactttttatacatgaaagttatcaattatttctatttt 7445016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 806 - 891
Target Start/End: Complemental strand, 33337048 - 33336961
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttaca-ttttatccttaagagagag-taatttatgttt 891  Q
    ||||||||| ||||| ||  || |||||||||   ||||||||||| |||||||| ||||||||||||||||||| ||||||||||||    
T  33337048 attaagaaaattgatagtgataataaatttgttggtaattactattggttttacaattttatccttaagagagagttaatttatgttt 33336961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 44529260 - 44529347
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaatt 193  Q
    |||||||| ||| |||||| |||  | ||||||||||||| | ||||||||| |||||  ||||||||| |||||||| |||||||||    
T  44529260 tttaaagtggaagttttatcttaaaagttgtgtattcaacatattaaaacattaaaaagtaactttttcaacataaaatttatcaatt 44529347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 758 - 860
Target Start/End: Complemental strand, 26547803 - 26547701
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||| ||| ||||||   |||||| ||||| ||||| ||||||| |||||||  | ||||||||| ||| | |||||||||||  ||||    
T  26547803 atactacctccgtccctaattatagggcccttttgaaaaataacggaaattaagatagttgatatttgtattaaatatgtttgtaattactattgttttt 26547704  T
Q  858 aca 860  Q
    |||    
T  26547703 aca 26547701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 44698034 - 44698124
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtt 196  Q
    |||||||| ||| |||||| || | | ||||||||||||| | || |||||| |||||  ||||||||| |||||||| ||||||||||||    
T  44698034 tttaaagtggaagttttatcttggaagttgtgtattcaacatattgaaacattaaaaagtaactttttcaacataaaatttatcaattgtt 44698124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 47235506 - 47235580
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||||   || |||||| ||||| ||||||| | ||||| ||||||||||||||||| |||||||    
T  47235506 atttgtgtattcaacaaattgaaacattaaaaagcaactttatttacatgaaagttatcaattgtttctattttt 47235580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 49806051 - 49805977
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||||||   |||||| || |||||  ||||||||||||||||||||||| |||||||| |||||||    
T  49806051 atttgtgcattcaacacattaaaatataaaaaagtaactttttctacataaaagttataaattgtttctattttt 49805977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 9433820 - 9433888
Alignment:
Q  129 ggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||||||||||||   || |||||||||| | |||||||||||| ||  ||||||||||||||||    
T  9433820 ggatttgtgtattcaacacattgaaacatcaaagagcaactttttctatatgcaagttatcaattgttt 9433888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 757 - 870
Target Start/End: Complemental strand, 14171829 - 14171714
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||| ||||||||| ||| |||||||  |||||| |||| ||||||  ||||||| ||| |||  | ||||||||| ||| |||||||||||||  ||    
T  14171829 tatactccctccgtccctaattataggacccttttgaaaaaattacgggaattaagatagtggatatttgtattaaatatgtttataattactattgttt 14171730  T
Q  856 ttac-attttatcctt 870  Q
    |||| |||||||||||    
T  14171729 ttacaattttatcctt 14171714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 30289601 - 30289724
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||| ||||||||| ||| |||| || |||||||| ||||| ||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  |||    
T  30289601 atactccctccgtccctaattataagactcttttgctaaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgtttt 30289700  T
Q  857 taca-ttttatccttaagagagag 879  Q
    |||| |||||||||||||||||||    
T  30289701 tacaattttatccttaagagagag 30289724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 765 - 879
Target Start/End: Complemental strand, 43789949 - 43789834
Alignment:
Q  765 ctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attt 863  Q
    |||||||| |||||||||||  ||||  |||||| ||||  |||||| |||||| |  |||| |||||||||||||||| |||||||  |||| | | ||    
T  43789949 ctccgtccctaaatataggaccctttgccaaaatcacgggaattaagtaagttggtactagtgttaaatttgtatataagtactattgtttttccaaatt 43789850  T
Q  864 tatccttaagagagag 879  Q
    |||||| |||||||||    
T  43789849 tatcctcaagagagag 43789834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 878
Target Start/End: Original strand, 2606702 - 2606776
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcc-ttaagagaga 878  Q
    ||||||||||||||| ||| |||||||||||| | |||||| ||||  |||||| ||||||||| ||||||||||    
T  2606702 attaagaaagttgatggtaatattaaatttgtttgtaattagtattgtttttacgattttatcctttaagagaga 2606776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 12807025 - 12806991
Alignment:
Q  155 catcaaaaaacaactttttctacataaaagttatc 189  Q
    ||||||||||||| |||||||||||||||||||||    
T  12807025 catcaaaaaacaattttttctacataaaagttatc 12806991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 23542276 - 23542154
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| ||| |||| ||  ||||||| ||||| ||||  ||||||||||  |||  | ||||||||||||| | |||| ||||||  ||||    
T  23542276 tactccctccgtccctaattataagacccttttgctaaaatcacgggaattaagaaagcggatatttgtattaaatttgtttgtaatcactattgttttt 23542177  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  23542176 acaattttatccttaagagagag 23542154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 45039709 - 45039587
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| ||| |||| ||  ||||||| ||||| ||||  ||||||||||  |||  |||||||||| |||| | |||| ||||||  ||||    
T  45039709 tacttcctccgtccctaattataagacccttttgctaaaatcacgggaattaagaaagcggatattagtattaaagttgtttgtaatcactattgttttt 45039610  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  45039609 acaattttatccttaagagagag 45039587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 756 - 879
Target Start/End: Original strand, 1047989 - 1048114
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||| ||||||||| ||| |||| ||  ||||||| ||||| ||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  |    
T  1047989 atatactccctccgtccctaattataagacccttttgctaaaatcacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgtt 1048088  T
Q  855 tttaca-ttttatccttaagagagag 879  Q
    |||||| |||||||||||||||||||    
T  1048089 tttacaattttatccttaagagagag 1048114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 757 - 891
Target Start/End: Complemental strand, 22567368 - 22567229
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| || ||||| ||  ||||||  ||||||||||| ||||||||||| |||  | ||||||  ||||| | |||| ||||||  ||    
T  22567368 tatactacctccgtccctatatataagacccttttgttaaaattacggaaattaagaaagtggatatttgtattatttttgtttgtaatcactattgttt 22567269  T
Q  856 ttac-attttatccttaagagagag---taatttatgttt 891  Q
    |||| |||||||  |||||||||||   ||||||||||||    
T  22567268 ttacaattttattattaagagagagagttaatttatgttt 22567229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 141 - 16
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    |||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  141 atatactacctccgtccttaaatataggagccttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattatt 42  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  41 tttacaattttatccttaagagagag 16  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 36941568 - 36941443
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  36941568 atatactacctccgtccctaaatataggagtcttttgtcaaaattgcggagattaagaaagttgattgtagtattaaatttgtatataattactattgtt 36941469  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  36941468 tttacaattttatccttaagagagag 36941443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 11293951 - 11293794
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  11293951 atactacctccgtctctaaatataggagtcttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 11293852  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||||||||||||||||   |||||||| |||   ||||||||||||||||    
T  11293851 tacaattttatccttaagagagagagttaatttatattttcaacataatatttattgt 11293794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 43292737 - 43292892
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||  |||    
T  43292737 atactacctccgtccctaaatataggagccttttgccaaaattacggagattaagatagttggttgtaatattaaatttgtatataattactattgtttt 43292836  T
Q  857 tac-attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  43292837 tacaattttatccttaagagagagttaatttatgttttcaacataatatttattgt 43292892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 12802905 - 12802751
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||| |||||||||||| ||||| |||||||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||  ||||    
T  12802905 atactacctccgtccctaaatataggagccttttccaaaattatggagattaaaaaagttggttgtagtattaaatttgtatttaattactattgttttt 12802806  T
Q  858 ac-attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    || |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  12802805 acaattttatccttaagagagagttaatttatgttttcaacataatatttattgt 12802751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 762 - 908
Target Start/End: Complemental strand, 36786761 - 36786608
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||||||     
T  36786761 tacctccgtccctaaatataggagccttttgccaaaattacggagattatgaaagttggttgtagtattaaatttgtatataattactattgtttttaca 36786662  T
Q  860 attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  36786661 attttatccttaagagagagagttaatttatgttttcaacataatatttattgt 36786608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 29073917 - 29073765
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||    
T  29073917 tactacctccgtccctaaatatatgagccttttgcaaaaattacggagattaagaaaattggttgtagtattaaatttgtatataattactatt-gtttt 29073819  T
Q  858 acattttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    | | |||||| ||||||||||| ||||||||||||   ||||||||||||||||    
T  29073818 ataatttatcattaagagagagttaatttatgttttcaacataatatttattgt 29073765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 762 - 908
Target Start/End: Original strand, 23894651 - 23894802
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||||| ||||||||||| | |||||  ||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  ||||||     
T  23894651 tacctccgtccctaaatataggaattttttgttaaaattacggagattaagaaagttggttgtagtgttaaatttgtatataattattattgtttttaca 23894750  T
Q  860 attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  23894751 attttatccttaagagagagttaatttatgttttcaacataatatttattgt 23894802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 757 - 891
Target Start/End: Complemental strand, 19176989 - 19176851
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| |||||| || |  ||    
T  19176989 tatactacctccgtccttaattatagaagtcttttgcaaaaattacagagattaagaaagttggttgtagtattaaatttgtatgtaattaatactgttt 19176890  T
Q  856 ttac-attttatccttaagagagag--taatttatgttt 891  Q
    |||| ||||||||||||||||||||  ||||||||||||    
T  19176889 ttacaattttatccttaagagagagattaatttatgttt 19176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 26502778 - 26502655
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||| ||||| ||||||||||||||||||| ||||||  |||    
T  26502778 atactacctccgtccttaaatataggagtcttttgtaaaaattacgcatattaagaaagttggttgtattattaaatttgtatataatcactattgtttt 26502679  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  26502678 tacaattttatccttaagagagag 26502655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 879
Target Start/End: Original strand, 5244364 - 5244489
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatat-aattactattagt 854  Q
    |||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||  |    
T  5244364 tatactacttccgtccctaaatataggagtcttttacaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataaattactattgtt 5244463  T
Q  855 ttta-cattttatccttaagagagag 879  Q
    ||||  ||||||||||||||||||||    
T  5244464 tttagaattttatccttaagagagag 5244489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 759 - 905
Target Start/End: Complemental strand, 5110178 - 5110025
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||| ||| ||||||||||||| |||| | ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||  ||||    
T  5110178 tactacctccatccctaaatataggagttttttaccaaaattacggagattaaaaaagttaattgtagtattaaatttgtatataattattattgttttt 5110079  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttat 905  Q
    || ||||||||||||||||||||   ||||||||||||   |||||||||||||    
T  5110078 acaattttatccttaagagagaggattaatttatgttttcaacataatatttat 5110025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 876
Target Start/End: Original strand, 44165209 - 44165328
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||||||| ||  ||||||||||||||||| || |||||||||||||||||||||||||||||  ||||    
T  44165209 tactacctccgtccctaaatataggagccttttgcaaaaattgtggagattaagaaagttggttatagtattaaatttgtatataattactattgttttt 44165308  T
Q  858 ac-attttatccttaagaga 876  Q
    || |||||||||||||||||    
T  44165309 acaattttatccttaagaga 44165328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 759 - 878
Target Start/End: Complemental strand, 23425106 - 23424985
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||| |||| ||||||||||||  ||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||    
T  23425106 tactacctctgtccctaaatataggagcattttgtcaaaattacggagattaagaaagttggttgttgtattaaatttgtatataattactattgttttt 23425007  T
Q  858 ac-attttatccttaagagaga 878  Q
    || ||||||||||||| |||||    
T  23425006 acaattttatccttaaaagaga 23424985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 17336715 - 17336559
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||| ||||||| ||| |||||||   |||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||| ||||    
T  17336715 atactacgtccgtccctaattataggaacattttgcaaaaattacggagattaagaaaattggttgtagtattaaatttgtatgtaattactatt-gttt 17336617  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  17336616 tacaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 17336559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 498 - 633
Target Start/End: Complemental strand, 12908815 - 12908680
Alignment:
Q  498 tttattgcgagcagttttgtcccgaaagctccgtgaattgccgtcgtccaataaaaacttgctctggtcgaaaataagggagtcatgggtgtaagttttg 597  Q
    ||||| || |||||||||||| | || ||| |  |||||||| || ||||||| ||||| ||| ||| |||| |||| ||||||||||||||||||||||    
T  12908815 tttatcgcaagcagttttgtctcaaatgcttcacgaattgccttcctccaatagaaactcgctttggccgaatataaaggagtcatgggtgtaagttttg 12908716  T
Q  598 gtcaaacttgggatttagtagcattaaaatttcatt 633  Q
    ||||||||||||||| ||||||||||||||||||||    
T  12908715 gtcaaacttgggattgagtagcattaaaatttcatt 12908680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 765 - 906
Target Start/End: Complemental strand, 35179891 - 35179743
Alignment:
Q  765 ctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-att 862  Q
    |||||| | |||||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||  |||||| |||    
T  35179891 ctccgtgcctaaatataggagccttttgccaaaattactgagattaagaaagttggttgtagtattaaatttgtatataattaatattgtttttacaatt 35179792  T
Q  863 ttatccttaagagagag---taatttatgttt--cacataatatttatt 906  Q
    |||||||||||| ||||   ||||||||||||   ||||||||||||||    
T  35179791 ttatccttaagaaagagaattaatttatgttttcaacataatatttatt 35179743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 23498028 - 23497871
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||| ||||| ||| |||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||  ||||| ||||  |||    
T  23498028 atactaccttcgtccctaattataggagccttttgcaaaaattacggagattgagaaagttggttgtagtattaaatttgtatgcaattattattgtttt 23497929  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    | | ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  23497928 tccaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 23497871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 23995874 - 23995751
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||| ||  |||    
T  23995874 atactacctccgtccctaaatataagagccttttaccaaaattgtggagattaagaaagttggttgtagtattaaatttgtatataattactgttgtttt 23995775  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||| ||||||||    
T  23995774 tacaattttatccttgagagagag 23995751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 759 - 876
Target Start/End: Complemental strand, 26626089 - 26625971
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagatt-aagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||||||| |||||||||||||||||||| |||||| |||||||| |||||||||| ||||| |||||||||||  |||||||||||||  |||    
T  26626089 tactacctccgtccctaaatataggagtcttttgcaaaaattgcggagattaaagaaagttggttgtaatattaaatttg--tataattactattgtttt 26625992  T
Q  857 tac-attttatccttaagaga 876  Q
    ||| |||||||||||||||||    
T  26625991 tacaattttatccttaagaga 26625971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 793 - 891
Target Start/End: Complemental strand, 36409858 - 36409756
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatg 888  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||| ||||||| ||||||||||||   |||||||||    
T  36409858 caaaattacggagattaagaaagttggttgtagtattaaatttgtataaaattactattgtttttacaattttattcttaagagagagaattaatttatg 36409759  T
Q  889 ttt 891  Q
    |||    
T  36409758 ttt 36409756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 113 - 234
Target Start/End: Original strand, 13244681 - 13244797
Alignment:
Q  113 tagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaatttga 212  Q
    ||||||||||||||||| ||||||||||||||  | || ||| |||||||||||| ||| ||||||||||||||||||||||||| ||||     |||||    
T  13244681 tagaaattttattttagaatttgtgtattcaatatattgaaatatcaaaaaacaattttgtctacataaaagttatcaattgtttctatt-----tttga 13244775  T
Q  213 atcattaacaactatccttaga 234  Q
    ||||||||||| |||| |||||    
T  13244776 atcattaacaagtatctttaga 13244797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 41898233 - 41898357
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactatt-agtt 855  Q
    |||||| |||||||  |||||||||||| |||||   ||||||  ||||||||||||||||| ||||||||||||||||||| ||||||||||||   ||    
T  41898233 atactatctccgtctctaaatataggagccttttattaaaattgtggagattaagaaagttggttgtagtattaaatttgtacataattactattgtttt 41898332  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  41898333 ttacaattttatccttaagagagag 41898357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 759 - 880
Target Start/End: Complemental strand, 5449729 - 5449606
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||  ||||||||||| | ||||| |||| ||| | | ||||| ||||||| |||||||||||||||| |||||||||| ||||  ||||    
T  5449729 tactacctccgtctctaaatataggaattttttgtaaaaattatgcaaattaaaaaagttggttgtagtattaaatttatatataattattattgttttt 5449630  T
Q  858 ac-attttatccttaagagagagt 880  Q
    || |||||||| ||||||||||||    
T  5449629 acaattttatctttaagagagagt 5449606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 32615839 - 32615938
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||||| || | ||| |||||||||||   || |||||| ||||||||||||| | ||||| ||||||||||||||||| |||||||    
T  32615839 tttaaagtagaaattttatcttggaattcgtgtattcaacacattgaaacattaaaaaacaactttatttacatgaaagttatcaattgtttctattttt 32615938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 29912142 - 29912241
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||||| |||  |||||||||||||||   || |||||||||||| ||||||| |||||||  ||||||||| || ||| |||||||    
T  29912142 tttaaagtagaaattttatcttaaaatttgtgtattcaactcattgaaacatcaaaaagcaactttatctacatggaagttatcatttatttctattttt 29912241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 42964789 - 42964875
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaatt 193  Q
    |||||||| |||||||||| || ||||| |||||||||||   || ||||||||||||| |||||||||||||| |||||||||||||    
T  42964789 tttaaagtggaaattttatcttgggatt-gtgtattcaacacattgaaacatcaaaaaataactttttctacatgaaagttatcaatt 42964875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 41235930 - 41235844
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||||||||||||| ||  |||||||||||||||||      |||||||||||||||||||||||||||| ||| |||||||||||||    
T  41235930 tttaaagtagaaattttacttg-ggatttgtgtattcaacac----aaacatcaaaaaacaactttttctacatgaaatttatcaattgttt 41235844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 757 - 851
Target Start/End: Complemental strand, 13143645 - 13143550
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactatt 851  Q
    |||||||| || |||  ||| |||| ||| ||||||||||| |||||||| ||| |||| ||| |||||||||||||||| |||||||||||||||    
T  13143645 tatactacatctgtctctaattatatgagccttttgcaaaaattacggagtttaggaaacttggttgtagtattaaatttatatataattactatt 13143550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 44812835 - 44812782
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||||||||||| ||||||||||||| ||| |||||| ||||||    
T  44812835 aaacatcaaaaaacaactttttatacataaaagttaacaactgttttcattttt 44812782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 45425331 - 45425195
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| || ||||| ||   |||||  |||||| |||| |||||||||||||||  |  ||||||| |||| | |||| ||||||  |||    
T  45425331 atactacctccgtccctatatataagaccattttgttaaaattgcggaaattaagaaagttgatatttatattaaagttgtttgtaatcactattgtttt 45425232  T
Q  857 taca-ttttatccttaagagagag-taatttatgttt 891  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  45425231 tacaattttatccttaagagagagttaatttatgttt 45425195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 13521814 - 13521715
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||||||||   |||||||||||| ||   || |||||| |||||| || ||| | ||||| ||||||||||||| ||| |||||||    
T  13521814 tttaaagtagaaattttattttgaaatttgtgtattctacacattgaaacattaaaaaataattttatttacatgaaagttatcaattatttctattttt 13521715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 13611349 - 13611250
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||||||||   |||||||||||| ||   || |||||| |||||| || ||| | ||||| ||||||||||||| ||| |||||||    
T  13611349 tttaaagtagaaattttattttgaaatttgtgtattctacacattgaaacattaaaaaataattttatttacatgaaagttatcaattatttctattttt 13611250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 41657698 - 41657600
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||||||| || ||||||||||  ||||| |||||| ||| | ||||||||||||||||||| | ||| || |||||| |||||  |||||| ||||||    
T  41657698 tttaaagtggagattttattttgagatttatgtatttaacatattaaaacatcaaaaaacaattatttttatataaaaattatcgcttgtttatatttt 41657600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 759 - 878
Target Start/End: Original strand, 17856517 - 17856638
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||||||| |||| ||  ||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  ||||    
T  17856517 tactccctccgtccttaattataagacccttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgttttt 17856616  T
Q  858 aca-ttttatccttaagagaga 878  Q
    ||| ||||||||||||||||||    
T  17856617 acaattttatccttaagagaga 17856638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 17922087 - 17922148
Alignment:
Q  126 ttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagtta 187  Q
    ||||||||||| |||||||| | |||||| || ||||| ||| |||||||||||||||||||    
T  17922087 ttaggatttgtatattcaacatattaaaaaataaaaaagcaattttttctacataaaagtta 17922148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 759 - 880
Target Start/End: Original strand, 23687905 - 23688029
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaatta-cggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| |||||||  |||||| |||| || |||  ||||||| ||| |||  | ||||||||| ||| |||||||||||||  ||||    
T  23687905 tactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttataattactattgttttt 23688004  T
Q  858 ac-attttatcc-ttaagagagagt 880  Q
    || ||||||||| ||||||||||||    
T  23688005 acaattttatcctttaagagagagt 23688029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 193
Target Start/End: Original strand, 43471369 - 43471413
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaatt 193  Q
    ||||||||||||||||||| ||||| ||||||||| |||||||||    
T  43471369 ttaaaacatcaaaaaacaattttttatacataaaaattatcaatt 43471413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 880
Target Start/End: Complemental strand, 23487363 - 23487236
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  |    
T  23487363 atatactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgtt 23487264  T
Q  855 tttac-attttatcc-ttaagagagagt 880  Q
    ||||| ||||||||| ||||||||||||    
T  23487263 tttacaattttatcctttaagagagagt 23487236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 29321033 - 29321156
Alignment:
Q  758 atactacctccgtccttaaatataggagtctttt-gcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| | | ||||||| |||||| | |||| |||||   |||||||||| |||  | |||||||| |||| | |||| ||||||  |||    
T  29321033 atactacctccgtcccttattataggattcttttagaaaaaatacgggttttaagaaagtggatatttgtattaaagttgtttgtaatcactattgtttt 29321132  T
Q  857 taca-ttttatccttaagagagag 879  Q
    |||| |||||||||||||||||||    
T  29321133 tacaattttatccttaagagagag 29321156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 221
Target Start/End: Complemental strand, 31331421 - 31331355
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaatttgaatcattaac 221  Q
    |||||| ||||| ||||||||| || || ||| ||||||||||||||||||||   ||||||||||||||    
T  31331421 aaacataaaaaagcaactttttatatatgaaaattatcaattgtttttatttt---tttgaatcattaac 31331355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 878
Target Start/End: Complemental strand, 44888979 - 44888856
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| ||||||| |||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | ||||| |||||| |||    
T  44888979 atactacctccgtccctaattataggactcttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattgctattatttt 44888880  T
Q  857 tac-attttatcc-ttaagagaga 878  Q
    ||| ||||||||| ||||||||||    
T  44888879 tacaattttatcctttaagagaga 44888856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 7859201 - 7859127
Alignment:
Q  133 ttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||||||||   ||||||||| |||||  ||||||||| ||||||||  |||||||||||||  |||||||    
T  7859201 ttgtgtattcaacacattaaaacattaaaaagtaactttttcaacataaaatatatcaattgttttcttttttaa 7859127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 757 - 870
Target Start/End: Original strand, 33865281 - 33865395
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||||||||| ||| ||||||   |||||| ||||| ||||| ||||||| ||| |||  | ||||||||| ||| | |||||| ||||  |||    
T  33865281 tatactacctccgtccctaattatagggtccttttgaaaaataacggaaattaagatagtggatatttgtattaaatatgtttgtaattagtattgtttt 33865380  T
Q  857 taca-ttttatcctt 870  Q
    |||| ||||||||||    
T  33865381 tacagttttatcctt 33865395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 41291545 - 41291443
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaa-ctttttctacataaaagttatcaattgtttttatttt 204  Q
    ||||||||| ||||||||| |   ||||||| |||||||| | || ||||||||||||| ||  ||||| ||||| ||| ||| ||||| ||||||||||    
T  41291545 tttaaagtataaattttatatggagatttgtatattcaacatattgaaacatcaaaaaataatttttttttacattaaaattaccaattatttttatttt 41291446  T
Q  205 taa 207  Q
    |||    
T  41291445 taa 41291443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 43799196 - 43799150
Alignment:
Q  159 aaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||| |||| ||| |||||||||||||||||||||||| ||||||||    
T  43799196 aaaatacaattttatctacataaaagttatcaattgttcttattttt 43799150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Complemental strand, 1883919 - 1883870
Alignment:
Q  149 ttaaaacatc-aaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||||| ||||||||| ||||| |||| ||||||||||||||||||    
T  1883919 ttaaaacatctaaaaaacaattttttttacacaaaagttatcaattgttt 1883870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 3036582 - 3036505
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaa 183  Q
    |||||||||| || ||||| |||  | ||||||||||||| | |||||| || |||||||||||||||  ||||||||    
T  3036582 tttaaagtagcaactttatcttaaaaattgtgtattcaacttattaaaagattaaaaaacaacttttttcacataaaa 3036505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 24585829 - 24585918
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgt 195  Q
    |||||| |||||||||||| ||   |||||| ||||||||   ||||||||||||||| |||  || | ||||| |||||||||||||||    
T  24585829 tttaaaatagaaattttatcttgaaatttgtttattcaacacattaaaacatcaaaaagcaatcttatatacatgaaagttatcaattgt 24585918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 31082359 - 31082408
Alignment:
Q  156 atcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||| ||| ||||||||||||||||| ||| ||||||| |||||||    
T  31082359 atcaaaaagcaattttttctacataaaagtgatctattgtttctattttt 31082408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 204
Target Start/End: Original strand, 35471572 - 35471617
Alignment:
Q  159 aaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||| |||| ||||||||||||||| |||| |||||||||||||||    
T  35471572 aaaatacaattttttctacataaaaattattaattgtttttatttt 35471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 3e-44; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 759 - 891
Target Start/End: Complemental strand, 13236236 - 13236101
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  13236236 tactacctccgtccctaaatacaggagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattattttt 13236137  T
Q  858 ac-attttatccttaagagagagt-aatttatgttt 891  Q
    || ||||||||||||||||||||| |||||||||||    
T  13236136 acaattttatccttaagagagagtaaatttatgttt 13236101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 756 - 908
Target Start/End: Original strand, 23259875 - 23260034
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |    
T  23259875 atatactacctccgtccctaaatatagaagtcttttgccaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattaatattgtt 23259974  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||| ||||||||||||||||| ||   ||||||||||||   ||||||||||||||||    
T  23259975 tttacaattttatccttaagagaaagtgttaatttatgttttcaacataatatttattgt 23260034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 41686854 - 41687009
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgca-aaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||| |||| |||||||||||| |||||||  |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||  |||    
T  41686854 atactacctctgtccctaaatataggagccttttgcccaaattacggagattaagaaaattggttgtagtattaaatttgtatataattactattgtttt 41686953  T
Q  857 tac-attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  41686954 tacaattttatccttaagagagagttaatttatgttttcaacataatatttattgt 41687009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 31657982 - 31657859
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  31657982 atactacctccgtccctaaatatatgagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 31657883  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  31657882 tacaattttatccttaagagagag 31657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 758 - 877
Target Start/End: Complemental strand, 21069935 - 21069814
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||    
T  21069935 atactacctccgttcttaaatataagagtcttttgtcaaaattgcggagattaagaaagttggttgtattattaaatttgtatataattactattatttt 21069836  T
Q  857 tac-attttatccttaagagag 877  Q
    ||| ||||||||||||||||||    
T  21069835 tacaattttatccttaagagag 21069814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 759 - 880
Target Start/End: Original strand, 1303317 - 1303440
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||| ||||    
T  1303317 tactacctccgtccctaaatataagagttttttgtcaaaattacggagattaagaaagttggttgtagtattaaattaatatataattactattattttt 1303416  T
Q  858 ac-attttatccttaagagagagt 880  Q
    || |||||||||||||||||||||    
T  1303417 acaattttatccttaagagagagt 1303440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 7001599 - 7001477
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| | |||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  7001599 tactacctccgtccctgaatataagagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 7001500  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  7001499 acaattttatccttaagagagag 7001477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 756 - 876
Target Start/End: Complemental strand, 8950115 - 8949993
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||| ||||||| |||||||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  8950115 atatactacatccgtccctaaatataggagccttttgcaaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtt 8950016  T
Q  855 tttac-attttatccttaagaga 876  Q
    ||||| |||||||||||||||||    
T  8950015 tttacaattttatccttaagaga 8949993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 758 - 891
Target Start/End: Original strand, 35784659 - 35784795
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||| ||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||| ||||  |||    
T  35784659 atactaccttcgtccctaaatataggagtcttttgtcaaaattgcggagattaaaaaagttggttgtaatattaaatttgtatataattattattgtttt 35784758  T
Q  857 tac-attttatccttaagagagag-taatttatgttt 891  Q
    ||| |||||||||||||||||||| ||||||||||||    
T  35784759 tacaattttatccttaagagagagttaatttatgttt 35784795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 756 - 908
Target Start/End: Original strand, 6328540 - 6328699
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    |||||||| ||||||| |||||||||||| | |||| ||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  |    
T  6328540 atatactatctccgtcattaaatataggattattttacaaaaattacggagattaagaaagttggttgtagtattaaatttatatataattactattgtt 6328639  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||| ||||||||||||||||||||   |||||||| |||   ||||||||||||||||    
T  6328640 tttacaattttatccttaagagagagagttaatttatattttcaacataatatttattgt 6328699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 757 - 879
Target Start/End: Complemental strand, 24857854 - 24857730
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    ||||||||||||||  ||||||||||||| ||||||| ||||||   |||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  24857854 tatactacctccgtttttaaatataggagccttttgctaaaattgtagagattaagaaagttggttgtagtattaaatttgtatataattactattgttt 24857755  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  24857754 ttacaattttatccttaagagagag 24857730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 11432616 - 11432491
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    |||||||||||| || | ||||||||||||  |||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||  |    
T  11432616 atatactacctctgttcctaaatataggagcattttgcaaaaattacggagattaagaaagttggttgcagtattaaatttgtatatatttactattgtt 11432517  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  11432516 tttacaattttatccttaagagagag 11432491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 769 - 908
Target Start/End: Complemental strand, 25837295 - 25837149
Alignment:
Q  769 gtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttat 866  Q
    |||| |||||||||||| ||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||    
T  25837295 gtccctaaatataggagccttttaccaaaattacgaagattaagaaagttgtttgtagtattaaatttgtatataattactattgtttttacaattttat 25837196  T
Q  867 ccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||||| ||||||   ||||||||||||   ||||||||||||||||    
T  25837195 ccttaaaagagagagttaatttatgttttcaacataatatttattgt 25837149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 758 - 876
Target Start/End: Original strand, 16284929 - 16285049
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||| || ||||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| ||||  |||    
T  16284929 atactatcttcgtccctaaatataggagtcttttgtcaaaattacggagattaagaaaattggttgtaatattaaatttgtatataattattattgtttt 16285028  T
Q  857 tac-attttatccttaagaga 876  Q
    ||| |||||||||||||||||    
T  16285029 tacaattttatccttaagaga 16285049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 27834241 - 27834085
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||| ||| |||||||||||| || |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||  |||  ||||    
T  27834241 tactacatccatccttaaatatatgaatcttttgcaaaaattacgtagattaagaaagttggttgtagtattaaatttgtatataattatcattgttttt 27834142  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || |||||||| |||||||||||   ||||||||||||   ||||||||||||||||    
T  27834141 acaattttatcattaagagagagagttaatttatgttttcaacataatatttattgt 27834085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 15559834 - 15559712
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| ||| |||||| |||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||  ||||    
T  15559834 tactacctccgtccctaaatataagagccttttgtaaaaattacggagattaagaaagttggttctagtattaaatttgcatataattactattgttttt 15559735  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||| ||||||||||||    
T  15559734 acaattttattcttaagagagag 15559712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 769 - 908
Target Start/End: Original strand, 28414435 - 28414580
Alignment:
Q  769 gtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatc 867  Q
    |||| |||||||| |||  |||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  28414435 gtccctaaatatatgagctttttgcaaaactacggagattaagaaagtttgttgtagtattaaatttatatataattattattgtttttacaattttatc 28414534  T
Q  868 cttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||||||||||   ||||||||||||   ||||||||||||||||    
T  28414535 cttaagagagagagttaatttatgttttcaacataatatttattgt 28414580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 39971312 - 39971174
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||| ||||||||||  || ||||||| |||||| ||||||||||||||||   ||||||||||||||||||||| ||||||||||  |||    
T  39971312 atactacctccgttcttaaatatataagccttttgccaaaattgcggagattaagaaagtgagttgtagtattaaatttgtatacaattactattgtttt 39971213  T
Q  857 tac-attttatccttaagagagag---taatttatgttt 891  Q
    ||| ||||||||||||||||||||   ||||||||||||    
T  39971212 tacaattttatccttaagagagagagttaatttatgttt 39971174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 757 - 874
Target Start/End: Complemental strand, 5283346 - 5283227
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||| |||||||||| |||| ||||||| | |||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||  ||    
T  5283346 tatattacctccgtctttaattataggaatattttgcaaaaattacggagattaagaaagtttgttgtagtattaaatttgtatgtaattactattgttt 5283247  T
Q  856 ttac-attttatccttaaga 874  Q
    |||| |||||||||||||||    
T  5283246 ttacaattttatccttaaga 5283227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 802 - 908
Target Start/End: Complemental strand, 16926705 - 16926594
Alignment:
Q  802 ggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagag-agag-taatttatgttt--cacat 896  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| |||| ||||||||||||   ||||    
T  16926705 ggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttttacaattttatccttaagagaagagttaatttatgttttcaacat 16926606  T
Q  897 aatatttattgt 908  Q
    ||||||||||||    
T  16926605 aatatttattgt 16926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 761 - 876
Target Start/End: Complemental strand, 31642482 - 31642365
Alignment:
Q  761 ctacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac 859  Q
    |||| ||||||| |||||||| ||| ||||||||||| || |||||||||||||||||| |||||||||||||||||   ||||||||||||  ||||||    
T  31642482 ctacatccgtccctaaatatacgagccttttgcaaaaattgcggagattaagaaagttggttgtagtattaaatttgataataattactattgtttttac 31642383  T
Q  860 -attttatccttaagaga 876  Q
     |||||||||||||||||    
T  31642382 aattttatccttaagaga 31642365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 756 - 891
Target Start/End: Original strand, 39692391 - 39692529
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||| ||||| | |||||||||||  |||||  |||||||||||| ||||||||||||| | ||| ||||||||||||||||||||| | ||  |    
T  39692391 atatactacatccgttcctaaatataggaaccttttatcaaaattacggaaattaagaaagttggtagtaatattaaatttgtatataattattgttgtt 39692490  T
Q  855 tttac-attttatccttaagagagag-taatttatgttt 891  Q
    ||||| ||||||| |||||||||||| ||||||||||||    
T  39692491 tttacaattttattcttaagagagagttaatttatgttt 39692529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 758 - 876
Target Start/End: Complemental strand, 18251318 - 18251198
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||| ||  |||||| |||||| |||   ||||| ||||||| | ||| ||||||||||||||||||||||||||  |||    
T  18251318 atactacctccgtccctaaatatatgatccttttgtcaaaatcacgagaattaaaaaagttggtagtaatattaaatttgtatataattactattgtttt 18251219  T
Q  857 tac-attttatccttaagaga 876  Q
    ||| |||||||||||||||||    
T  18251218 tacaattttatccttaagaga 18251198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 761 - 908
Target Start/End: Original strand, 8356281 - 8356435
Alignment:
Q  761 ctacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac 859  Q
    |||||||||||| ||||||||||||  ||||  ||||||||| |  ||||||||||||||| ||| |||||||||| |||||||||||| ||  ||||||    
T  8356281 ctacctccgtccctaaatataggagcattttatcaaaattactggaattaagaaagttgatagtaatattaaatttatatataattactgttgtttttac 8356380  T
Q  860 -attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
     ||||||| ||||| ||| ||   ||||||||||||   ||||||||||||||||    
T  8356381 aattttatacttaaaagatagagttaatttatgttttcaacataatatttattgt 8356435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 805 - 878
Target Start/End: Complemental strand, 41470895 - 41470821
Alignment:
Q  805 gattaagaaagttgattgtagtattaaatttgtatataattactattagtttta-cattttatccttaagagaga 878  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||  |||||  |||||||| ||||||||||    
T  41470895 gattaagaaagttgatagtaatattaaatttgtatataattactattgtttttataattttatctttaagagaga 41470821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 20975555 - 20975636
Alignment:
Q  116 aaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||||||| ||||| ||||||| ||| | || ||||||||| ||||||||||||| ||||  ||||||||||||||||    
T  20975555 aaattttattttgggattcgtgtattgaacatattgaaacatcaacaaacaactttttcaacatgtaagttatcaattgttt 20975636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 763 - 837
Target Start/End: Original strand, 16636748 - 16636823
Alignment:
Q  763 acctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgt 837  Q
    |||||||||| |||||||| ||||||||||| |||||| | |||||||||||||||  ||||| ||||||||||||    
T  16636748 acctccgtccctaaatataagagtcttttgccaaaattgcagagattaagaaagtttgttgtaatattaaatttgt 16636823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 41360972 - 41360897
Alignment:
Q  130 gatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||| ||| | || |||||||||||  |||| ||||||||||||||||||||||||||||| ||||||    
T  41360972 gatttgtatatttaacatattgaaacatcaaaaggcaacattttctacataaaagttatcaattgttttcattttt 41360897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 113 - 205
Target Start/End: Complemental strand, 13203227 - 13203135
Alignment:
Q  113 tagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaac-aactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||| ||||||| |||||||   || |||||| ||||||  |||||||||||||| ||| ||||||||| |||||||||||    
T  13203227 tagaaattttattttagaatttgtg-attcaacacattgaaacattaaaaaaataactttttctacatgaaaattatcaattatttttattttt 13203135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 40004149 - 40004271
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| |||||||| ||  ||||||| ||||| ||||| ||||||||||  |||  | |||||||| |||| | |||| ||||||  ||||    
T  40004149 tactccctccgtccctaaatataagatccttttgctaaaatcacggaaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgttttt 40004248  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  40004249 acaattttatccttaagagagag 40004271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 41807331 - 41807234
Alignment:
Q  109 aaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||||||||||||||   | ||||||||||||||| || ||| || ||||   |||||||||||||||||| |||  |||||||| |||||||||    
T  41807331 aaagtagaaattttattttgtaaattgtgtattcaacctattgaaatattaaaagt-aactttttctacataaaatttagtaattgtttctatttttaa 41807234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 186398 - 186273
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||| ||||||||| ||| |||| ||  ||||||| ||||| ||||  ||||||||||  |||  | ||||||||||||| | |||| ||||||  |    
T  186398 atatactccctccgtccctaattataagacccttttgctaaaatcacgggaattaagaaagcggatatttgtattaaatttgtttgtaatcactattgtt 186299  T
Q  855 tttaca-ttttatccttaagagagag 879  Q
    |||||| |||||||||||||||||||    
T  186298 tttacaattttatccttaagagagag 186273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 207
Target Start/End: Original strand, 6562633 - 6562732
Alignment:
Q  107 ttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaac-tttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||| |||||||||||||  |||||||||||||||   || ||||||| ||||||||| || || ||||||||| ||||||||| ||| |||||||    
T  6562633 ttaaagtaaaaattttattttaaaatttgtgtattcaacacattgaaacatc-aaaaacaacattgttttacataaaa-ttatcaattatttctattttt 6562730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 8611820 - 8611775
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    |||||||||||| ||||||||||||||| ||| |||||||||||||    
T  8611820 aaacatcaaaaagcaactttttctacatgaaaattatcaattgttt 8611775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 19608804 - 19608878
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||| ||||||||   || |||||| |||||  |||||||||||||||||| ||||||||| ||| |||||||    
T  19608804 atttgtctattcaacacattgaaacattaaaaagtaactttttctacataaaaattatcaattatttctattttt 19608878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 7940749 - 7940624
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  |||    
T  7940749 atactacctccgtccctaattataggatccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgtttt 7940650  T
Q  857 tac-attttatcc-ttaagagagagt 880  Q
    ||| ||||||||| ||||||||||||    
T  7940649 tacaattttatcctttaagagagagt 7940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 16127559 - 16127434
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||| | ||||||| ||| |||| ||  ||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  |    
T  16127559 atatactccatccgtccctaattataagacccttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgtt 16127460  T
Q  855 tttaca-ttttatccttaagagagag 879  Q
    |||||| |||||||||||||||||||    
T  16127459 tttacaattttatccttaagagagag 16127434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 3e-44; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 29719451 - 29719588
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  29719451 tactacctccgtccttaaatataggagccttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 29719550  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  29719551 acaattttatccttaagagagagagttaatttatgttt 29719588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 756 - 908
Target Start/End: Original strand, 28810858 - 28811017
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |    
T  28810858 atatactacctccgttcctaaatatagaagtcttttgctaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgtt 28810957  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  28810958 tttacaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 28811017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 754 - 876
Target Start/End: Original strand, 32968961 - 32969085
Alignment:
Q  754 acatatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactatta 852  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  32968961 acatatactacctccgtccctaaatataggagtcttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattg 32969060  T
Q  853 gttttac-attttatccttaagaga 876  Q
     |||||| |||||||||||||||||    
T  32969061 tttttacaattttatccttaagaga 32969085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 44561435 - 44561592
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  44561435 atactacctccgtccctaaatatagaagccttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 44561534  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  44561535 tacaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 44561592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 42526365 - 42526521
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||  ||||    
T  42526365 tactacctccgtccttaaatataagagccttttgtcaaaattacagagattaagaaagttgattatagtattaaatttgtatataattactattgttttt 42526464  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  42526465 acaattttatccttaagagagaggattaatttatgttttcaacataatatttattgt 42526521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 757 - 908
Target Start/End: Original strand, 1111386 - 1111544
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||  ||    
T  1111386 tatactacctccgtccctaattataggagccttttgcaaaaattacggagattaagaaagttggttgtagcattaaatttgtatgtaattactattgttt 1111485  T
Q  856 ttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  1111486 ttacaattttatccttaagagagagaattaatttatgttttcaacataatatttattgt 1111544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 45404674 - 45404549
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  |    
T  45404674 atatactacctccgtccctaaatataggagccttttgccaaaattgcggagattaagaaagtttgttgtagtattaaatttgtatataattactattgtt 45404575  T
Q  855 tttac-attttatccttaagagagag 879  Q
    ||||| ||||||||||||||||||||    
T  45404574 tttacaattttatccttaagagagag 45404549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 757 - 906
Target Start/End: Original strand, 47008240 - 47008396
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| |||||||||||  ||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||  ||    
T  47008240 tatactacctccgtccctaaatataggacccttttgccaaaattacggagattaaaaaagttggttgtagtattaaatttgtatataattactattgttt 47008339  T
Q  856 ttac-attttatccttaagagagag---taatttatgttt--cacataatatttatt 906  Q
    |||| |||||||||||||| |||||   ||||||||||||   ||||||||||||||    
T  47008340 ttacaattttatccttaagggagagagttaatttatgttttcaacataatatttatt 47008396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 759 - 878
Target Start/End: Original strand, 12918578 - 12918699
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  12918578 tactacctccgtccctaaatatatgagccttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 12918677  T
Q  858 ac-attttatccttaagagaga 878  Q
    || |||||||||||||||||||    
T  12918678 acaattttatccttaagagaga 12918699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 757 - 879
Target Start/End: Complemental strand, 8379976 - 8379852
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||| |  ||    
T  8379976 tatactacctccgtccctaaatatagaagtcttttgaaaaaattacggagattaagaaagttagttgtagtattaaatttgtatataattactactgttt 8379877  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  8379876 ttacaattttatccttaagagagag 8379852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 758 - 908
Target Start/End: Complemental strand, 38341246 - 38341091
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||| ||| ||||| ||||| |||| |||||||||||||||| ||||| |||||||| |||||||||||||||||  |||    
T  38341246 atactacctccgtccctaaatatacgagccttttacaaaaattacagagattaagaaagttggttgtaatattaaatctgtatataattactattgtttt 38341147  T
Q  857 tac-attttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||| |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  38341146 tacaattttatccttaagagagagttaatttatgttttcaacataatatttattgt 38341091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 757 - 879
Target Start/End: Original strand, 48902447 - 48902571
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||||||||||||  |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||  ||    
T  48902447 tatactacctccgtccctaaatataggagcattttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataactactattgttt 48902546  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  48902547 ttacaattttatccttaagagagag 48902571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 48904002 - 48904125
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||| | ||||||||||||  ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  48904002 atactacctccgttcctaaatataggagcattttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 48904101  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  48904102 tacaattttatccttaagagagag 48904125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 891
Target Start/End: Complemental strand, 24813883 - 24813746
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    ||||||||||| |||| |||||||| ||||||||||| |||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||  ||    
T  24813883 tatactacctctgtccctaaatataagagtcttttgccaaaattgcagagattaagaaagctggttgtagtattaaatttgtatataattactattgttt 24813784  T
Q  856 ttac-attttatccttaagagagagt-aatttatgttt 891  Q
    |||| ||||||||||||||||| ||| |||||||||||    
T  24813783 ttacaattttatccttaagagaaagtaaatttatgttt 24813746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 908
Target Start/End: Original strand, 27646044 - 27646202
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||| ||||||||  |||||||||| ||||||||||||| ||||||| |||||| ||||||||||||| |||||||||||  ||    
T  27646044 tatactacctccgtccctaattataggagctttttgcaaaaattacggagattaaaaaagttggttgtagcattaaatttgtatgtaattactattgttt 27646143  T
Q  856 ttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  27646144 ttacaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 27646202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 876
Target Start/End: Complemental strand, 31541321 - 31541200
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| |||||| ||||| ||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||    
T  31541321 tatactacctccgtccctaaatacaggagccttttgccaaaattgtggagattaagaaagttggttgtagtattaaatttgtatataattactattgttt 31541222  T
Q  856 ttac-attttatccttaagaga 876  Q
    |||| |||||||||||||||||    
T  31541221 ttacaattttatccttaagaga 31541200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 759 - 882
Target Start/End: Complemental strand, 36585002 - 36584877
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||||||  ||||| ||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||  ||||    
T  36585002 tactacctccgtccctaaatataggagctttttgtcaaaattgcggagattaagaaagtcggttgtagtattaaatttgtatataattactattgttttt 36584903  T
Q  858 a-cattttatccttaagagagagtaa 882  Q
    |  |||||||||||||||||||||||    
T  36584902 ataattttatccttaagagagagtaa 36584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 762 - 908
Target Start/End: Original strand, 21497554 - 21497707
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||||  ||| ||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||     
T  21497554 tacctccgtctctaattataggagtattttataaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattattattgtttttaca 21497653  T
Q  860 attttatccttaagagagag---taatttatg--tttcacataatatttattgt 908  Q
    ||||||||||||||||||||   |||||||||  ||| ||||||||||||||||    
T  21497654 attttatccttaagagagagagttaatttatgtttttaacataatatttattgt 21497707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 891
Target Start/End: Complemental strand, 4564534 - 4564397
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||  ||||    
T  4564534 tactacctccgtctctaaatatatgagtcttttgccaaaattacggagattatgaaagttggttgtaatattaaatttgtatattattactattgttttt 4564435  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  4564434 acaattttatccttaagagagagagttaatttatgttt 4564397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 34021735 - 34021891
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||||||||| ||||||  |||||| |||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||||  ||||    
T  34021735 tactacctccgtccttaaatttaggagcattttgccaaaattacagagattaaaaaagttggttgtagtattaaatttgtatataattattattgttttt 34021834  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||| ||   ||||||||||||   ||||||||||||||||    
T  34021835 acaattttatccttaagagatagagttaatttatgttttcaacataatatttattgt 34021891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 876
Target Start/End: Complemental strand, 34811610 - 34811492
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||| || |||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | |||    
T  34811610 tactacctccgtccctaaatatagtagccttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactatt-gcttt 34811512  T
Q  858 ac-attttatccttaagaga 876  Q
    || |||||||||||||||||    
T  34811511 acaattttatccttaagaga 34811492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 42043994 - 42044116
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||||||  ||||| ||||| | |||||||||||||||||| |||||||||||||||||| |||||||||||||  ||||    
T  42043994 tactacctccgtccctaaatataggagctttttgtcaaaaatgcggagattaagaaagttggttgtagtattaaatttgtgtataattactattgttttt 42044093  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  42044094 acaattttatccttaagagagag 42044116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 777 - 906
Target Start/End: Original strand, 4836451 - 4836585
Alignment:
Q  777 atataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaaga 874  Q
    |||||||||||||||| |||| ||||||||||||||||||||  || |||||||||||||| ||||||||||||||  |||||| |||||||||||||||    
T  4836451 atataggagtcttttgtaaaaattacggagattaagaaagttagttttagtattaaatttgaatataattactattgtttttacgattttatccttaaga 4836550  T
Q  875 gagag-taatttatgttt--cacataatatttatt 906  Q
    ||||| ||||||||||||   ||||||||||||||    
T  4836551 gagagttaatttatgttttcaacataatatttatt 4836585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 756 - 891
Target Start/End: Original strand, 17589613 - 17589753
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| |||||||||||  ||||||| |||||| | |||||||| || | || ||||||||||||||||||||||||||||||||  |    
T  17589613 atatactacctccgtccctaaatataggacccttttgccaaaattgcagagattaaaaatggtggttgtagtattaaatttgtatataattactattgtt 17589712  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt 891  Q
    ||||| ||||||||||||||||||||   ||||||||||||    
T  17589713 tttacaattttatccttaagagagagagttaatttatgttt 17589753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 775 - 905
Target Start/End: Original strand, 29447551 - 29447688
Alignment:
Q  775 aaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaa 872  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||  ||||||||||||||||||||||||||||||||| || ||| |||||||||||||    
T  29447551 aaatataggtgtcttttacaaaaattacggagattaagaaaattagttgtagtattaaatttgtatataattactattatttgtacaattttatccttaa 29447650  T
Q  873 gagagag---taatttatgttt--cacataatatttat 905  Q
    |||||||   ||||||||||||   |||||||||||||    
T  29447651 gagagagaattaatttatgttttcaacataatatttat 29447688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 42755638 - 42755516
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||| |||||||||||||| ||||||| |||| | |||||||||||||||||| ||||||||||||||||  ||||||||||||||  ||||    
T  42755638 tactacctccgttcttaaatataggagccttttgccaaaactgcggagattaagaaagttggttgtagtattaaatttacatataattactattgttttt 42755539  T
Q  858 a-cattttatccttaagagagag 879  Q
    |  ||||||||||||| ||||||    
T  42755538 ataattttatccttaaaagagag 42755516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 54927829 - 54927987
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| ||||||||  |||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||||||||  |||    
T  54927829 atactacctccgtccctaattataggagctttttgcaaaaattacggagattaagcaagttggttgtagtattaaatttgtatgtaattactattgtttt 54927928  T
Q  857 ta-cattttatcctt---aagagagag-taatttatgttt--cacataatatttattgt 908  Q
    ||  |||||||| ||   ||||||||| ||||||||||||   ||||||||||||||||    
T  54927929 tataattttatcatttaaaagagagagttaatttatgttttcaacataatatttattgt 54927987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 756 - 839
Target Start/End: Complemental strand, 30820200 - 30820116
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtat 839  Q
    ||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  30820200 atatactacctccgtccctaaatataagagccttttgtcaaaattacggagattaagaaagttggttgtagtattaaatttgtat 30820116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 766 - 845
Target Start/End: Original strand, 48654992 - 48655072
Alignment:
Q  766 tccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataatt 845  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||    
T  48654992 tccgtccctaaatataggagtcttttgcaaaaattaccgagattaggaaagttgattgtagtattaaatttgtatataatt 48655072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 766 - 879
Target Start/End: Original strand, 28874999 - 28875113
Alignment:
Q  766 tccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attt 863  Q
    ||||||| ||||||||||||  |||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||    
T  28874999 tccgtccctaaatataggagcattttgccaaaattgtggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttttacaattt 28875098  T
Q  864 tatccttaagagagag 879  Q
    ||| ||||||||||||    
T  28875099 tat-cttaagagagag 28875113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 759 - 838
Target Start/End: Original strand, 40214820 - 40214900
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgta 838  Q
    |||||||||| |||||||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||    
T  40214820 tactacctccatccttaaatataggagccttttgtcaaaattacggagattaggaaagttggttgtagtattaaatttgta 40214900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 793 - 906
Target Start/End: Complemental strand, 33290606 - 33290489
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag-taatttatgtt 890  Q
    |||||| ||||| |||||||||||||||  ||||||||||||||| |||||||||||||| |||||| ||| ||| |||||||||||| |||||||||||    
T  33290606 caaaatcacggaaattaagaaagttgataatagtattaaatttgtttataattactattatttttacaattgtattcttaagagagagttaatttatgtt 33290507  T
Q  891 -tc-acataatatttatt 906  Q
     || ||||||||||||||    
T  33290506 ctcaacataatatttatt 33290489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 761 - 865
Target Start/End: Original strand, 52693442 - 52693547
Alignment:
Q  761 ctacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac 859  Q
    ||||||| |||| |||||||| |||  |||||  |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||    
T  52693442 ctacctctgtccctaaatataagagctttttgttaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttttac 52693541  T
Q  860 atttta 865  Q
    | ||||    
T  52693542 aattta 52693547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 22494395 - 22494522
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg--caaaattacggagattaagaaagttgattgtagtattaa----atttgtatataattactatta 852  Q
    |||||||||||||| || |||||||   |||||   |||||||||||||||| ||||||||||||||||||||||     ||| | ||||||||||||||    
T  22494395 tactacctccgtccctatatataggcaactttttgccaaaattacggagatttagaaagttgattgtagtattaattttttttttttataattactatta 22494494  T
Q  853 gttttac-attttatccttaagagagag 879  Q
     |||||| ||||||||||||||||||||    
T  22494495 tttttacaattttatccttaagagagag 22494522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 793 - 879
Target Start/End: Original strand, 34265499 - 34265586
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag 879  Q
    |||||||||||  ||||||||||| | | ||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  34265499 caaaattacgggaattaagaaagtcggtagtagtattaaatttgtatataattactattgtttttacaattttattcttaagagagag 34265586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 24487781 - 24487851
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaatttgaatcattaacaa 223  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| |||||    ||||||||||||||||    
T  24487781 ttaaaacatcaaaaattaactttttctacataaaagttatcaattgtttctattt----tttgaatcattaacaa 24487851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 123 - 207
Target Start/End: Original strand, 25985391 - 25985475
Alignment:
Q  123 attttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||| |||| |||||||||| | |  |||||| |||||||||||||||||| |||||||||||||||| ||| |||||||||    
T  25985391 attttagaatttttgtattcaacatatcgaaacattaaaaaacaactttttctatataaaagttatcaattatttctatttttaa 25985475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 820 - 891
Target Start/End: Complemental strand, 15095433 - 15095358
Alignment:
Q  820 ttgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgttt 891  Q
    ||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||||   ||||||||||||    
T  15095433 ttgtagtattaaatttgtatatatttactattgtttttacaattttatccttaagagagagagttaatttatgttt 15095358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 31732169 - 31732095
Alignment:
Q  119 ttttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaatt 193  Q
    |||||| || ||||||||||||||||| | || |||||||||||| |||||||||| |||| |||||||| ||||    
T  31732169 ttttatcttgggatttgtgtattcaacatattgaaacatcaaaaagcaactttttcaacatgaaagttatgaatt 31732095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 806 - 860
Target Start/End: Original strand, 41392667 - 41392721
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttaca 860  Q
    |||||||||||||||||||||||||||||||| | |||||||||||  |||||||    
T  41392667 attaagaaagttgattgtagtattaaatttgtttgtaattactattgtttttaca 41392721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 43767318 - 43767392
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||||||   |||||||||||||||  || ||||||||||||||| ||||||||||||| |||||||    
T  43767318 atttgtgcattcaacacattaaaacatcaaaaagtaattttttctacataaaatttatcaattgtttatattttt 43767392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 53248635 - 53248709
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||| |||||||| | |||||| | ||||||  |||||||| ||||||||||||||||||||||| |||||||    
T  53248635 atttgtatattcaacatattaaaaaaccaaaaagtaactttttatacataaaagttatcaattgtttctattttt 53248709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 757 - 841
Target Start/End: Original strand, 2801213 - 2801298
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatat 841  Q
    ||||||| |||| ||| |||||||| |||| ||||| |||||| ||||  |||||||||||||||  |||||||||||||||||||    
T  2801213 tatactaactccatccctaaatataagagttttttgtcaaaatcacgggaattaagaaagttgataatagtattaaatttgtatat 2801298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 118 - 198
Target Start/End: Complemental strand, 34600873 - 34600792
Alignment:
Q  118 attttattttaggatttgtgtattcaaccttttaaaacatcaaaaaac-aactttttctacataaaagttatcaattgtttt 198  Q
    |||||||||| ||||||||||| |||||   ||  ||||||||||||  |||||||| ||||||||||||||||||||||||    
T  34600873 attttattttgggatttgtgtaatcaacacattgtaacatcaaaaaaataactttttatacataaaagttatcaattgtttt 34600792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 15496244 - 15496146
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||||||||| || ||||| || ||||||||||||||||| | || ||  |||||||| ||||||||   |||| ||||||||||||| ||| ||||||    
T  15496244 tttaaagtaggaactttatcttgggatttgtgtattcaacatattgaattatcaaaaagcaacttttaacacatgaaagttatcaattatttatatttt 15496146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 756 - 879
Target Start/End: Complemental strand, 29383315 - 29383189
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| |||||||||||   |||||  ||||| ||||  ||||||||| |||||  ||||| ||||||||| | |||||| ||||  |    
T  29383315 atatactacctccgtccctaaatataggacctttttgaaaaaataacgggaattaagaaaattgataatagtaataaatttgtttgtaattattattgtt 29383216  T
Q  855 tttac-attttatcctt-aagagagag 879  Q
    ||||| ||||||||||| |||||||||    
T  29383215 tttacaattttatccttgaagagagag 29383189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 44765132 - 44765209
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaa-acaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||||||||||   || |||||| | ||| |||| |||||||||||||||||||| |||| |||||||||||||    
T  44765132 atttgtgtattcaacacattcaaacataagaaacacaattttttctacataaaagttattaattatttttatttttaa 44765209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 14428907 - 14428784
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||| ||||||||| ||| |||| ||  ||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  |||    
T  14428907 atactccctccgtccctaattataagacccttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgtttt 14428808  T
Q  857 taca-ttttatccttaagagagag 879  Q
    |||| |||||||||||||||||||    
T  14428807 tacaattttatccttaagagagag 14428784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 207
Target Start/End: Complemental strand, 27473743 - 27473692
Alignment:
Q  156 atcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||| |||||||||||| || ||||||||||||| |||| ||||||||    
T  27473743 atcaaaaagcaactttttctaaatgaaagttatcaattattttgatttttaa 27473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 197
Target Start/End: Original strand, 35365199 - 35365290
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||| ||||||  |||| |||||||| |||||| |   || || |||||||||||||| |||| || || |||||||||||||||||    
T  35365199 tttaaagtataaatttcttttttggatttgtatattcatcacattcaatcatcaaaaaacaacgttttttaaatgaaagttatcaattgttt 35365290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 891
Target Start/End: Original strand, 49543967 - 49544056
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttaca-ttttatccttaagagagag---taatttatgttt 891  Q
    ||||||||| ||||| ||  || |||||||||   ||||||||||| |||||||| |||||||||||||||||||   ||||||||||||    
T  49543967 attaagaaaattgatagtgataataaatttgttggtaattactattggttttacaattttatccttaagagagagagttaatttatgttt 49544056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 756 - 878
Target Start/End: Original strand, 8503237 - 8503362
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa--ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattag 853  Q
    ||||||||||||| ||| ||| ||||||  ||||| | ||||  | ||||  ||||||||| ||||| ||  || |||||||||   ||||||||||| |    
T  8503237 atatactacctccatccctaattatagggttctttagaaaaaaataacgggaattaagaaaattgatagtgataataaatttgttggtaattactattgg 8503336  T
Q  854 ttttac-attttatccttaagagaga 878  Q
    |||||| |||||||||||||||||||    
T  8503337 ttttacaattttatccttaagagaga 8503362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 16041471 - 16041426
Alignment:
Q  159 aaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||| || ||||||||||||||| |||||||||||||||    
T  16041471 aaaaaacaacttatt-tacataaaagttatcgattgtttttattttt 16041426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 794 - 879
Target Start/End: Complemental strand, 41824369 - 41824283
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttaca-ttttatccttaagagagag 879  Q
    ||||||||||| ||||||||||| |||  |  ||||||| |||| | ||| |||||||  ||||||| |||||||||||||||||||    
T  41824369 aaaattacggaaattaagaaagtggatatttatattaaagttgtttgtaagtactattgtttttacagttttatccttaagagagag 41824283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 47077662 - 47077751
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaaca--actttttctacataaaagttatcaatt 193  Q
    ||||||||| |||||||||||| | ||||||||||| ||| | |||||| || |||||| |  | |||||| |||| |||||||||||||    
T  47077662 tttaaagtaaaaattttatttttgaatttgtgtatttaacatattaaaatataaaaaaaaaatattttttcaacatgaaagttatcaatt 47077751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 826 - 879
Target Start/End: Original strand, 53589464 - 53589517
Alignment:
Q  826 tattaaatttgtatataattactattagtttta-cattttatccttaagagagag 879  Q
    |||||||||||||||||||||||||| ||||||  | ||||||||||||||||||    
T  53589464 tattaaatttgtatataattactatt-gttttataaatttatccttaagagagag 53589517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 20621424 - 20621549
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  |||    
T  20621424 atactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgtttt 20621523  T
Q  857 tac-attttatcc-ttaagagagagt 880  Q
    ||| ||||||||| ||||||||||||    
T  20621524 tacaattttatcctttaagagagagt 20621549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 870
Target Start/End: Original strand, 41750926 - 41751039
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||||||| |||| ||  |||||| ||||| ||||  ||||||| ||| |||  |  |||||||| ||| | |||||||||||  ||||    
T  41750926 atactacctccgtccttaattatatgatccttttgaaaaataacgggaattaagatagtggatatttatattaaatatgtttgtaattactattgttttt 41751025  T
Q  858 ac-attttatcctt 870  Q
    || |||||||||||    
T  41751026 acaattttatcctt 41751039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 45513375 - 45513500
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||||||| |||||||  ||||||  ||||| ||||| ||||||| |||  ||  | ||||||||| ||| | ||||||||||   |||    
T  45513375 atactacctccgtccttaattataggacccttttgaaaaaataacggaaattaagatagtgaatatttgtattaaatatgtttgtaattactatcgtttt 45513474  T
Q  857 tac-attttatcc-ttaagagagagt 880  Q
    ||| ||||||||| ||||||||||||    
T  45513475 tacaattttatcctttaagagagagt 45513500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 8e-42; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 19845407 - 19845565
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  19845407 tactacctccgtccctaaatataggagtcttttgccaaaattacggagattaagaaagttagttgtagtattaaatttgtatataattactattgttttt 19845506  T
Q  858 ac-attttatccttaagagagag-----taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||     ||||||||||||   ||||||||||||||||    
T  19845507 acaattttatccttaagagagagagagttaatttatgttttcaacataatatttattgt 19845565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 27813798 - 27813660
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||    
T  27813798 atactacctccgtccctaaatataggagccttttgcaaaaattgcggagattaagaaagtggattgtagtattaaatttgtatataattactattgtttt 27813699  T
Q  857 tac-attttatccttaagagagag---taatttatgttt 891  Q
    ||| ||||||||||||||||||||   ||||||||||||    
T  27813698 tacaattttatccttaagagagagagttaatttatgttt 27813660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 42887820 - 42887976
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||||||  ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  42887820 tactacctccgtccctaaatataggagcattttgtcaaaattacagagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 42887919  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  42887920 acaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 42887976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 30535001 - 30534865
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||| ||||| | |||||| | |||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  30535001 atactacctccgtccctaaatataggagcctttttccaaaattgcagagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 30534902  T
Q  857 tac-attttatccttaagagagag-taatttatgttt 891  Q
    ||| |||||||||||||||||||| ||||||||||||    
T  30534901 tacaattttatccttaagagagagttaatttatgttt 30534865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 45722307 - 45722148
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg--caaaattac--ggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    |||||||||||||||||||||||||||| ||||   |||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| |||| |    
T  45722307 tactacctccgtccttaaatataggagtttttttgccaaaattacacggagattaagaaagttggttgtagtattaaatttgtatataattaccattatt 45722208  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||| ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  45722207 tttacaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 45722148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 759 - 874
Target Start/End: Original strand, 32643544 - 32643661
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||    
T  32643544 tactacctcagtccctaaatataggagtcttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttatatataattactattgttttt 32643643  T
Q  858 ac-attttatccttaaga 874  Q
    || |||||||||||||||    
T  32643644 acaattttatccttaaga 32643661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 774 - 908
Target Start/End: Complemental strand, 3776111 - 3775970
Alignment:
Q  774 taaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcctta 871  Q
    ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||| || |||||||||    
T  3776111 taaatatagaagtcttttgcaaaaattacggagattaaaaaagttgattgtagtattaaatttgtatataattactattgtttttacaatattatcctta 3776012  T
Q  872 agagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||||||||   ||||||||||||   ||||||||||||||||    
T  3776011 agagagagagttaatttatgttttcaacataatatttattgt 3775970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 762 - 891
Target Start/End: Complemental strand, 33683005 - 33682873
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||| | |||||||||||| |||||| ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||  ||||||     
T  33683005 tacctccgtacctaaatataggagccttttgtcaaaattgcggagattaagaaagttggttgtagttttaaatttgtatataattactattgtttttaca 33682906  T
Q  860 attttatccttaagagagagt-aatttatgttt 891  Q
    ||||||||||||||||||||| |||||||||||    
T  33682905 attttatccttaagagagagtaaatttatgttt 33682873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 32964135 - 32964291
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| |||| |||||||||| ||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||  ||||    
T  32964135 tactacctccgtccataaatatatgagttttttgcaaaaattacggagattaaaaaagttggttgtattattaattttgtatataattactattgttttt 32964234  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  32964235 acaattttatccttaagagagagaattaatttatgttttcaacataatatttattgt 32964291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 880
Target Start/End: Complemental strand, 35888607 - 35888484
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| ||||||||||  |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  35888607 tactacctccgtccctaaatataagagtcttttgttaaaattgcggagattaagaaagtttgttgtagtattaaatttgtatataattactattgttttt 35888508  T
Q  858 ac-attttatccttaagagagagt 880  Q
    || |||||||||||||||||||||    
T  35888507 acaattttatccttaagagagagt 35888484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 49044860 - 49044997
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||| | ||||||||||||||||||||| ||||||||||  ||||    
T  49044860 tactacctccgtccctaaatataggagccttttgccaaaattgcggagattaagaaagtgggttgtagtattaaatttgtatacaattactattgttttt 49044959  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  49044960 acaattttatccttaagagagagagttaatttatgttt 49044997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 876
Target Start/End: Complemental strand, 34693700 - 34693579
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||| ||  ||||||||||||||||||||| ||||||||||| ||    
T  34693700 tatactacctccgtccctaaatatagaagccttttgctaaaattacggagattaagaaaatttgttgtagtattaaatttgtatacaattactattattt 34693601  T
Q  856 ttac-attttatccttaagaga 876  Q
    |||| |||||||||||||||||    
T  34693600 ttacaattttatccttaagaga 34693579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 21135545 - 21135389
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| |||| ||| ||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||| |||  ||||    
T  21135545 tactacctccgtccgtaattataagagccttttgcaaaaattacggagaataagcaagttgattgtagtattaaatttgtatgtaattaccattgttttt 21135446  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  21135445 acaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 21135389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 47648918 - 47649040
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||||||||||||  |||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  47648918 tactacctccgtccataaatataggagctttttgccaaaattgcggagattgagaaagttggttgtagtattaaatttgtatataattactattgttttt 47649017  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||| ||||||||||||    
T  47649018 acaattttattcttaagagagag 47649040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 757 - 879
Target Start/End: Original strand, 8781950 - 8782072
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| |||||||| ||| ||||||| |||||| |||||||||||||||||| ||||||||||  ||||||||||||||||||||  ||    
T  8781950 tatactacctccgtccctaaatatatgagccttttgccaaaattgcggagattaagaaagttggttgtagtatt--atttgtatataattactattgttt 8782047  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  8782048 ttacaattttatccttaagagagag 8782072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 752 - 879
Target Start/End: Complemental strand, 9682905 - 9682776
Alignment:
Q  752 aaacatatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactat 850  Q
    ||||| ||||||||||||||| |||||||| |||  |||||| ||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  9682905 aaacacatactacctccgtccctaaatataagagcattttgccaaaattgtggacattaagaaagttggttgtagtattaaatttgtatataattactat 9682806  T
Q  851 tagttttac-attttatccttaagagagag 879  Q
    |  |||||| ||||||||||||||||||||    
T  9682805 tgtttttacaattttatccttaagagagag 9682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 3881278 - 3881437
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactatta--gtt 855  Q
    ||||| || ||||| ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||  |||    
T  3881278 tactatcttcgtccctaaatatagaagtcttttgtaaaaattacggagattaagaaagttagttgtagtattaaatttgtatataattactattattgtt 3881377  T
Q  856 tt--acattttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||  | ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  3881378 tttaaaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 3881437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 758 - 874
Target Start/End: Original strand, 2345282 - 2345400
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||||||   ||||||||||||  |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||  |||    
T  2345282 atactacctccgtttctaaatataggagctttttgccaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattaatattgtttt 2345381  T
Q  857 tac-attttatccttaaga 874  Q
    ||| |||||||||||||||    
T  2345382 tacaattttatccttaaga 2345400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 756 - 891
Target Start/End: Original strand, 44510081 - 44510220
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||| ||||||||| |||||||| ||| ||||||| |||||| |||||||||||||||| | ||||||||||||||| ||||| |||||||||| ||    
T  44510081 atatactccctccgtccctaaatatatgagacttttgccaaaattgcggagattaagaaagtgggttgtagtattaaattggtatacaattactatt-gt 44510179  T
Q  855 tttac-attttatccttaagagagag---taatttatgttt 891  Q
    ||||| ||||||||||||||||||||   ||||||||||||    
T  44510180 tttacaattttatccttaagagagagagttaatttatgttt 44510220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 758 - 849
Target Start/End: Complemental strand, 19293421 - 19293329
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattacta 849  Q
    ||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  19293421 atactacatccgtccctaaatataggagccttttgccaaaattacggagattaagaaagttggttgtaatattaaatttgtatataattacta 19293329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 762 - 880
Target Start/End: Original strand, 32699449 - 32699569
Alignment:
Q  762 tacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac- 859  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||||||||||| |   ||||||||||||||||||||| ||||| ||||  ||||||     
T  32699449 tacctccgtccctaaatataggagtcttttgctaaaattacagagattaagaaaatatgttgtagtattaaatttgtataaaattattattgtttttaca 32699548  T
Q  860 attttatccttaagagagagt 880  Q
    |||||||||||||||||||||    
T  32699549 attttatccttaagagagagt 32699569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 774 - 879
Target Start/End: Complemental strand, 24504966 - 24504859
Alignment:
Q  774 taaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcctta 871  Q
    ||||||||| | | |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  24504966 taaatatagaaattttttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttttacaattttatcctta 24504867  T
Q  872 agagagag 879  Q
    || |||||    
T  24504866 agcgagag 24504859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 759 - 842
Target Start/End: Original strand, 40299092 - 40299176
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatata 842  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  40299092 tactacctccgtccctaaatataggagtcttttgtcaaaattatggagattaaaaaagttggttgtagtattaaatttgtatata 40299176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 769 - 879
Target Start/End: Complemental strand, 43934876 - 43934764
Alignment:
Q  769 gtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttat 866  Q
    |||| |||||||||||| ||||||  |||||| |||||||||||||||||| |||||||||||||||| ||||||||||| |||  |||||| |||||||    
T  43934876 gtccctaaatataggagccttttgtgaaaattgcggagattaagaaagttggttgtagtattaaatttttatataattacaattgtttttacaattttat 43934777  T
Q  867 ccttaagagagag 879  Q
    |||||||||||||    
T  43934776 ccttaagagagag 43934764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 774 - 879
Target Start/End: Original strand, 23801938 - 23802045
Alignment:
Q  774 taaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcctta 871  Q
    |||||||| ||| ||||||| |||||| ||| |||||| ||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  23801938 taaatatatgagccttttgccaaaattgcggggattaacaaagttggttgtagtattaaatttgtatataattactattgtttttacaattttatcctta 23802037  T
Q  872 agagagag 879  Q
    ||||||||    
T  23802038 agagagag 23802045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 802 - 879
Target Start/End: Original strand, 6910599 - 6910677
Alignment:
Q  802 ggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag 879  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  6910599 ggagattcagaaagttggttgtagtattaaatttgtatataattactattgtttttacaattttatccttaagagagag 6910677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 801 - 876
Target Start/End: Complemental strand, 37915396 - 37915320
Alignment:
Q  801 cggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagaga 876  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||  |||||| |||||||||||||||||    
T  37915396 cggagattaagaaagttggttgtagtattaaatttatatataattactattgtttttacaattttatccttaagaga 37915320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 759 - 842
Target Start/End: Original strand, 33682629 - 33682715
Alignment:
Q  759 tactacctccgtccttaaatataggag--tcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatata 842  Q
    ||||||||| |||| ||||||||||||  | |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  33682629 tactacctctgtccctaaatataggagcatattttgcaaaaattacggagattaagaaagttggttgtagtattaaatttgtatata 33682715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 794 - 908
Target Start/End: Original strand, 22991521 - 22991640
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttacattttatccttaagagagag---taatttatgtt 890  Q
    ||||||||||  |||||||||||||    ||||||||||||||| |||||||||||||  |||||||||||||||| |||||||||   || ||||||||    
T  22991521 aaaattacgggaattaagaaagttggaattagtattaaatttgtttataattactattgtttttacattttatcctaaagagagagagttagtttatgtt 22991620  T
Q  891 t--cacataatatttattgt 908  Q
    |   ||||||||||||||||    
T  22991621 ttcaacataatatttattgt 22991640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 793 - 908
Target Start/End: Original strand, 31802897 - 31803016
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag-taatttatgtt 890  Q
    |||||| ||| | ||||| |||||| ||  ||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||| || ||||||||    
T  31802897 caaaatcacgaaaattaaaaaagttaataatagtattaaatttgtttataattactattgtttttacaattttatccttaagagagagttagtttatgtt 31802996  T
Q  891 t--cacataatatttattgt 908  Q
    |   ||||||||||||||||    
T  31802997 ttcaacataatatttattgt 31803016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 113 - 196
Target Start/End: Original strand, 43638968 - 43639052
Alignment:
Q  113 tagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaac-aactttttctacataaaagttatcaattgtt 196  Q
    |||||||||||||||  |||||||||||||||  | || |||||| ||||||  |||||||||||||||||||||||||||||||    
T  43638968 tagaaattttattttgagatttgtgtattcaatatattgaaacataaaaaaaataactttttctacataaaagttatcaattgtt 43639052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 8902973 - 8903063
Alignment:
Q  116 aaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaa-caactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||| ||||||||||| ||| | || || ||| |||||| ||||||| | || ||||||||||||||||||||||||||||    
T  8902973 aaattttattttagaatttgtgtatttaacgtattgaagcattaaaaaagcaactttatttatataaaagttatcaattgtttttattttt 8903063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 7711927 - 7711982
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    |||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||    
T  7711927 aaacatcaaaaaacaattttctctacataaaagttctcaattatttttatttttaa 7711982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 806 - 879
Target Start/End: Complemental strand, 19497494 - 19497420
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag 879  Q
    ||||||||| ||| | |||||||||||||||| ||||||| |||||  |||||| ||||||||||||||||||||    
T  19497494 attaagaaaattggtagtagtattaaatttgtttataattcctattgtttttacaattttatccttaagagagag 19497420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 34896155 - 34896033
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||||||| ||||||| | |||||| ||||| ||||  ||||||||| |  ||  | |||||||| |||| | |||| ||||||| ||||    
T  34896155 tactacctccgtccttaattataggacttttttgctaaaatcacgggaattaagaaaataaatatttgtattaaagttgtttgtaatcactattattttt 34896056  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  34896055 acaattttatccttaagagagag 34896033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 39258866 - 39258955
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtt 196  Q
    |||||| | |||||||||||||   ||||||||||||| | | || ||||||||||||| ||||||||||| || ||||||||||||||||    
T  39258866 tttaaaatggaaattttattttgaaatttgtgtattca-catattcaaacatcaaaaaataactttttctatatgaaagttatcaattgtt 39258955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 6707700 - 6707600
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||||||||||||||  |||  |||| ||||||||||   ||||||||| |||||| |||||||| ||||| |||||||||||||| ||  ||||||    
T  6707700 tttaaagtagaaattttaccttaatatttatgtattcaacacattaaaacattaaaaaataacttttt-tacatgaaagttatcaattgcttccattttt 6707602  T
Q  206 aa 207  Q
    ||    
T  6707601 aa 6707600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 197
Target Start/End: Complemental strand, 22329637 - 22329592
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||    
T  22329637 aaacatcaaaaaacaactttttctacatataagttataaattgttt 22329592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 3237372 - 3237308
Alignment:
Q  132 tttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtt 196  Q
    |||||||||||||||| || |||||||||| | ||| ||||| ||||| ||||||||||||||||    
T  3237372 tttgtgtattcaacctattgaaacatcaaagagcaattttttttacatgaaagttatcaattgtt 3237308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 758 - 876
Target Start/End: Complemental strand, 9303948 - 9303828
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||||||||||||||||| ||||| || |||||||| ||||| ||||  ||||||||||| |||  |  ||||||| |||| | ||| |||||||  |||    
T  9303948 atactacctccgtccttatatataagactcttttgctaaaatcacgggaattaagaaagtggatatttatattaaagttgtttgtaagtactattgtttt 9303849  T
Q  857 taca-ttttatccttaagaga 876  Q
    |||| ||||||||||||||||    
T  9303848 tacagttttatccttaagaga 9303828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 47188465 - 47188521
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||| ||||||||  ||||||||||||||||||||||| |||||||| |||||||    
T  47188465 ttaaaatatcaaaaagtaactttttctacataaaagttattaattgtttctattttt 47188521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 36586893 - 36586839
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttta 206  Q
    |||| ||||||||||||||| ||||||| ||||||||||||| |||| |||||||    
T  36586893 aaacgtcaaaaaacaactttatctacatgaaagttatcaattattttcattttta 36586839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 11663066 - 11663013
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||| |||| |||||||||| ||||||||||||||||| |||||||    
T  11663066 aaacatcgaaaagcaacgttttctacatgaaagttatcaattgtttctattttt 11663013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 197
Target Start/End: Original strand, 24423447 - 24423528
Alignment:
Q  116 aaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||| ||  ||||| ||||||||||   || ||||| |||||||||||||||||||||| ||||| ||| |||||||    
T  24423447 aaattttatcttgagatttatgtattcaacacattgaaacaccaaaaaacaactttttctacatgaaagtcatcgattgttt 24423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 764 - 878
Target Start/End: Original strand, 42298172 - 42298289
Alignment:
Q  764 cctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-at 861  Q
    ||||||||| ||| |||||||  |||||| |||| ||||||  ||||||| ||| |||  | ||||||||| ||| |||||||||||||| |||||| ||    
T  42298172 cctccgtccctaattataggatccttttgaaaaaattacgggaattaagatagtggatatttgtattaaatatgtttataattactattatttttacaat 42298271  T
Q  862 tttatcc-ttaagagaga 878  Q
    ||||||| ||||||||||    
T  42298272 tttatcctttaagagaga 42298289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 756 - 876
Target Start/End: Complemental strand, 46148731 - 46148609
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaa--ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattag 853  Q
    ||||||||||||||||| ||| |||| | |||||||  ||||  | ||||  ||||||||| ||||| ||  || |||||||||  |||||||||||| |    
T  46148731 atatactacctccgtccctaattataag-gtcttttataaaaaataacgggaattaagaaaattgatagtgataataaatttgttgataattactattgg 46148633  T
Q  854 ttttac-attttatccttaagaga 876  Q
    |||||| |||||||||||||||||    
T  46148632 ttttacaattttatccttaagaga 46148609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 205
Target Start/End: Original strand, 38987145 - 38987243
Alignment:
Q  107 ttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctac-ataaaagttatcaattgtttttattttt 205  Q
    |||||||| ||||||||| ||| |||||| ||||||||| | || ||| ||||||||| || | ||| ||  ||||||||||||||| ||||||||||||    
T  38987145 ttaaagta-aaattttatcttaagatttgagtattcaacatattgaaatatcaaaaaataattctttttaatataaaagttatcaatggtttttattttt 38987243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 758 - 851
Target Start/End: Original strand, 12631552 - 12631646
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactatt 851  Q
    ||||||| ||||||||||| |||||||  |||||  || ||| | ||| |||||||||||| ||  ||||||||||||||| ||| |||||||||    
T  12631552 atactacatccgtccttaattataggacccttttatcacaatcatggaaattaagaaagttaataatagtattaaatttgtttatgattactatt 12631646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 825 - 878
Target Start/End: Complemental strand, 19920791 - 19920737
Alignment:
Q  825 gtattaaatttgtatataattactattagttttacattttatcc-ttaagagaga 878  Q
    ||||||||| ||| | |||||||||||| ||||||||||||||| ||||||||||    
T  19920791 gtattaaatatgtttgtaattactattatttttacattttatcctttaagagaga 19920737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 204
Target Start/End: Complemental strand, 49142949 - 49142863
Alignment:
Q  118 attttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    ||||||||||| ||||||| ||||||||   || ||| || |||||| || ||||| ||||||||| |||||||  |||||||||||    
T  49142949 attttattttaagatttgtttattcaacacgttgaaatattaaaaaataattttttttacataaaaattatcaaccgtttttatttt 49142863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 870
Target Start/End: Complemental strand, 26843069 - 26842956
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| ||| ||||||| |||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  ||||    
T  26843069 tactacctccgtccctaattataggactcttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgttttt 26842970  T
Q  858 ac-attttatcctt 870  Q
    || |||||||||||    
T  26842969 acaattttatcctt 26842956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 30424892 - 30424937
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||||||  |||||||||||||| ||||||| |||||||||    
T  30424892 aaacatcaaaaagaaactttttctacatgaaagttagcaattgttt 30424937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 207
Target Start/End: Complemental strand, 34004873 - 34004772
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||| | |||| ||||| || | |||||||||| ||||   || ||||||| ||| |||||||||||||||| |||| | ||||||||||| | ||||    
T  34004873 tttaaaatggaaaatttatcttggaatttgtgtatgcaacacattgaaacatccaaagacaactttttctacatgaaagatttcaattgttttcaatttt 34004774  T
Q  206 aa 207  Q
    ||    
T  34004773 aa 34004772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 8e-42; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 30858236 - 30858113
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  30858236 atactacctccgtccctaaatataggagtcttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 30858137  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||||||||    
T  30858136 tacaattttatccttaagagagag 30858113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 759 - 908
Target Start/End: Original strand, 31633587 - 31633743
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||  ||||    
T  31633587 tactacctccgtccctaaatataggagtcttttgccaaaattacggagattaagaaagttggttgtaatattaaatttgtacataattactattgttttt 31633686  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||| ||||||||||||||   ||||||||||||   ||||||||||||||||    
T  31633687 acaattttgtccttaagagagagagttaatttatgttttcaacataatatttattgt 31633743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 28566448 - 28566292
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||    
T  28566448 tactacctcagttcttaaatataggactcttttgtcaaaattacggagattaagaaagttaattgtagtattaaatttgtatataattagtattgttttt 28566349  T
Q  858 ac-attttatccttaagagagag---taatttatg-tttca-cataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||| ||||| |||||||||||||||    
T  28566348 acaattttatccttaagagagagagttaatttatgttttcagcataatatttattgt 28566292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 757 - 908
Target Start/End: Complemental strand, 6028641 - 6028483
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||  ||    
T  6028641 tatactacctccgtccctaaatataagagtcttttgcaaaaattacggagattaagaaagttgattatagtattaaatttgtatataactactattgttt 6028542  T
Q  856 tta-cattttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||  ||||||||||||||||||||   |||||||| |||   ||||||||||||||||    
T  6028541 ttataattttatccttaagagagagagttaatttatattttcaacataatatttattgt 6028483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 758 - 891
Target Start/End: Original strand, 18970468 - 18970606
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| |||||||| ||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  18970468 atactacctccgtccctaaatatatgagccttttgcaaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 18970567  T
Q  857 tac-attttatccttaagagagag---taatttatgttt 891  Q
    ||| ||||||||||||||||||||   ||||||||||||    
T  18970568 tacaattttatccttaagagagagagttaatttatgttt 18970606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 41494362 - 41494484
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||  ||||||||||||||||| ||||||||||||||  ||||    
T  41494362 tactacctccgtccctaaatataggagtcttttgttaaaattgcggagattaagaaagttagttgtagtattaaatttgaatataattactattgttttt 41494461  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  41494462 acaattttatccttaagagagag 41494484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 757 - 908
Target Start/End: Complemental strand, 40544625 - 40544467
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaatt-acggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||| |||||||||||||||||||| | | ||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||    
T  40544625 tatactacctccgtccctaattataggagtcttttgcaaaaatgatggagattaagaaagttggttgtaatattaaatttgtatataattactattgttt 40544526  T
Q  856 tta-cattttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    |||  ||||||||||||| ||||||   ||||||||||||   ||||||||||||||||    
T  40544525 ttataattttatccttaaaagagagagttaatttatgttttcaacataatatttattgt 40544467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 759 - 877
Target Start/End: Original strand, 34431941 - 34432061
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||| |||||||  |||||||| ||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  34431941 tactatctccgtctctaaatataagagccttttgccaaaattgcggagattaagaaagttgattgtagtattaaatttgtatataattactattgttttt 34432040  T
Q  858 ac-attttatccttaagagag 877  Q
    || ||||||||||||||||||    
T  34432041 acaattttatccttaagagag 34432061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 876
Target Start/End: Complemental strand, 9701367 - 9701248
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||| | |||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  9701367 tactacctccgttcctaaatataagagccttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 9701268  T
Q  858 ac-attttatccttaagaga 876  Q
    || |||||||||||||||||    
T  9701267 acaattttatccttaagaga 9701248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 758 - 879
Target Start/End: Complemental strand, 21838914 - 21838791
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||| ||||||  ||||||||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  |||    
T  21838914 atactacatccgtctctaaatatagaagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgtttt 21838815  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| |||||||| |||||||||||    
T  21838814 tacaattttatctttaagagagag 21838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 36750624 - 36750761
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| |||||| |||||||||||||||| | ||||||||||||||||||||| |||||| |||  ||||    
T  36750624 tactacctccgtccctaaatataggagccttttgccaaaattgcggagattaagaaagtgggttgtagtattaaatttgtataaaattacaatttttttt 36750723  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  36750724 acaattttatccttaagagagagaattaatttatgttt 36750761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 41422809 - 41422687
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||  |||||| |||||||||||||||||| ||||||||||||||||| ||| ||||||||||  ||||    
T  41422809 tactacctccgtccctaaatataggagccttttgttaaaattgcggagattaagaaagttggttgtagtattaaatttgaatacaattactattgttttt 41422710  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  41422709 acaattttatccttaagagagag 41422687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 758 - 876
Target Start/End: Original strand, 11944377 - 11944497
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||| | | |||||||| ||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||  |||    
T  11944377 atactacctccattcctaaatatacgagccttttgcaaaaattacgaagattaagaaaattgattgtagtattaaatttgtatataattactattgtttt 11944476  T
Q  857 tac-attttatccttaagaga 876  Q
    ||| |||||||| ||||||||    
T  11944477 tacaattttatctttaagaga 11944497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 757 - 879
Target Start/End: Complemental strand, 43700920 - 43700796
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaatt-acggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||||||||||||| ||| ||||||||||||||||||||   ||| ||||||||||| ||| ||||||||||||||||||| || |||||||||  ||    
T  43700920 tatactacctccgtccctaattataggagtcttttgcaaaaaacacgaagattaagaaaattggttgtagtattaaatttgtacatgattactattgttt 43700821  T
Q  856 ttac-attttatccttaagagagag 879  Q
    |||| ||||||||||||||||||||    
T  43700820 ttacaattttatccttaagagagag 43700796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 765 - 891
Target Start/End: Original strand, 2788084 - 2788215
Alignment:
Q  765 ctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-att 862  Q
    |||||| ||||||||||| |  |||||| ||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||||||  |||||| |||    
T  2788084 ctccgttcttaaatatagaaaccttttgtcaaaattgcagagattaaaaaagttggttgtagtattaaatttgtatataattactattgtttttacaatt 2788183  T
Q  863 ttatccttaagagagag---taatttatgttt 891  Q
    |||||||||||||||||   ||||||||||||    
T  2788184 ttatccttaagagagagagttaatttatgttt 2788215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 757 - 849
Target Start/End: Original strand, 13214966 - 13215059
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattacta 849  Q
    |||||||||||||||| ||| |||||||  ||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13214966 tatactacctccgtccctaattataggaaccttttgcaaaaattacggagattaagaaagttagttgtagtattaaatttgtatataattacta 13215059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 794 - 908
Target Start/End: Original strand, 4408555 - 4408673
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgt 889  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||   |||||||| |    
T  4408555 aaaattacggagattaagaaagttgat--tagtattaaatttgtatataattattattgtttttacaattttatccttaagagagagaattaatttatat 4408652  T
Q  890 tt--cacataatatttattgt 908  Q
    ||   ||||||||||||||||    
T  4408653 tttcaacataatatttattgt 4408673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 793 - 879
Target Start/End: Original strand, 30830118 - 30830205
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag 879  Q
    |||||||  ||||||||| ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||    
T  30830118 caaaattggggagattaaaaaagttgattgtagtattaaatttgtatataattattattgtttttacaattttatccttaagagagag 30830205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 779 - 860
Target Start/End: Original strand, 27725450 - 27725532
Alignment:
Q  779 ataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttaca 860  Q
    ||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| || ||||||||| ||||  |||||||    
T  27725450 ataggagccttttgcaaaaattgcggagattaagaaagttgattgtagtattaaatgtgcatataattattattgtttttaca 27725532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 106 - 204
Target Start/End: Complemental strand, 37426629 - 37426531
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||||| ||||||||||| ||| |||||||||||||||||   || ||| |||||||| ||| ||||||||||| ||||||||  ||||||| ||||||    
T  37426629 tttaaaatagaaattttactttgggatttgtgtattcaacacattgaaatatcaaaaagcaattttttctacatgaaagttatggattgtttctatttt 37426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 806 - 908
Target Start/End: Complemental strand, 18294240 - 18294134
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgtttcacataatat 901  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||  |||||| ||||||| ||||||||| ||   | ||||||||||   |||||||    
T  18294240 attaagaaagttggtagtattattaaatttgtatataattactattgtttttacaattttattcttaagagaaagagttgatttatgtttttaataatat 18294141  T
Q  902 ttattgt 908  Q
    |||||||    
T  18294140 ttattgt 18294134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 11074610 - 11074519
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||||||||||| | || |||||||||||||||||   || |||||| ||||| ||||||||||| |||  |||||||| |||||||    
T  11074610 tttaaagtagaaattttttcttgggatttgtgtattcaacacattgaaacataaaaaagcaactttttctgcatggaagttatctattgttt 11074519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 205
Target Start/End: Complemental strand, 16011905 - 16011806
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||| |||||| || | |||| |||||| |||   |||||| ||||||||| || ||||| ||||||||||||||||||| ||| |||||||    
T  16011905 tttaaagtagaagttttatcttggaatttatgtattaaacacattaaaaaatcaaaaaataattttttttacataaaagttatcaattatttatattttt 16011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 130 - 205
Target Start/End: Original strand, 19204405 - 19204480
Alignment:
Q  130 gatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||| ||||||||||   || |||||| |||||| ||||||||| |||||||| |||||||||||||||||||||    
T  19204405 gatttatgtattcaacacattgaaacataaaaaaataactttttcaacataaaaattatcaattgtttttattttt 19204480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 757 - 879
Target Start/End: Complemental strand, 1360090 - 1359966
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||| ||||||||| ||| |||| || |||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  ||    
T  1360090 tatactccctccgtccctaattataagactcttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgttt 1359991  T
Q  856 ttaca-ttttatccttaagagagag 879  Q
    ||||| |||||||||||||||||||    
T  1359990 ttacaattttatccttaagagagag 1359966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 38788769 - 38788825
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    |||||||||||||||  |||||||||||||| |||||| |||||||||| |||||||    
T  38788769 ttaaaacatcaaaaagtaactttttctacatgaaagttgtcaattgtttctattttt 38788825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 752 - 880
Target Start/End: Original strand, 12889942 - 12890073
Alignment:
Q  752 aaacatatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactat 850  Q
    |||||| |||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | ||||||||||    
T  12889942 aaacatgtactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactat 12890041  T
Q  851 tagttttac-attttatcc-ttaagagagagt 880  Q
    || |||||| ||||||||| ||||||||||||    
T  12890042 tatttttacaattttatcctttaagagagagt 12890073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 16805531 - 16805653
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| ||| |||| || |||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  ||||    
T  16805531 tacttcctccgtccctaattataagactcttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgttttt 16805630  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  16805631 acaattttatccttaagagagag 16805653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 16844813 - 16844935
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| ||| |||| || |||||||| ||||||||||  ||||||||||  |||  | |||||||| |||| | |||| ||||||  ||||    
T  16844813 tacttcctccgtccctaattataagactcttttgctaaaattacgggaattaagaaagcggatatttgtattaaagttgtttgtaatcactattgttttt 16844912  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  16844913 acaattttatccttaagagagag 16844935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 44949251 - 44949325
Alignment:
Q  133 ttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||||||| | || ||| || |||||||||| |||||||| ||||| ||| |||||||||| ||||||||    
T  44949251 ttgtgtattcaacttattgaaagattaaaaaacaacattttctacgtaaaatttaacaattgttttcatttttaa 44949325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 825 - 876
Target Start/End: Complemental strand, 3095529 - 3095477
Alignment:
Q  825 gtattaaatttgtatataattactattagttttac-attttatccttaagaga 876  Q
    |||||||||||||||| ||||||||||  |||||| |||||||||||||||||    
T  3095529 gtattaaatttgtatacaattactattgtttttacaattttatccttaagaga 3095477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 757 - 879
Target Start/End: Complemental strand, 23789268 - 23789144
Alignment:
Q  757 tatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtt 855  Q
    |||||| ||||||||| ||| |||| || | |||||| ||||| ||||  ||||||||||| |||  | |||||||| |||| | |||| ||||||  ||    
T  23789268 tatactccctccgtccctaattataagactattttgctaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaatcactattgttt 23789169  T
Q  856 ttaca-ttttatccttaagagagag 879  Q
    ||||| |||||||||||||||||||    
T  23789168 ttacaattttatccttaagagagag 23789144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 31549823 - 31549752
Alignment:
Q  126 ttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgttt 197  Q
    ||||||||| |||||| ||  | || |||||||||||| ||||||||| ||||| ||||||||||| |||||    
T  31549823 ttaggatttatgtatttaatatattgaaacatcaaaaagcaactttttttacattaaagttatcaagtgttt 31549752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 31663665 - 31663614
Alignment:
Q  152 aaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattt 203  Q
    |||||||||||||  |||||||||| |||||| |||||||||||||| ||||    
T  31663665 aaacatcaaaaaattactttttctatataaaatttatcaattgttttcattt 31663614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 806 - 857
Target Start/End: Original strand, 32978865 - 32978916
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||| ||||||||| |||||||||||||||| | |||||||||||| ||||    
T  32978865 attaataaagttgatagtagtattaaatttgtttgtaattactattattttt 32978916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 35316150 - 35316249
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||| |||||||||||||  ||| | |||||||| |||||| || ||| ||  ||||  || | ||||||||||||| ||| |||||||||||||||||    
T  35316150 tttaaggtagaaattttatcatagaaattgtgtatccaacctattgaaatattcaaaagaaattctttctacataaaatttagcaattgtttttattttt 35316249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 806 - 852
Target Start/End: Complemental strand, 44417651 - 44417605
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactatta 852  Q
    ||||||||||||| ||||| |||||||||||| | ||||||||||||    
T  44417651 attaagaaagttggttgtaatattaaatttgtttgtaattactatta 44417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 808 - 879
Target Start/End: Complemental strand, 8867829 - 8867756
Alignment:
Q  808 taagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcc-ttaagagagag 879  Q
    |||||||||||||  |  |||||||||||| | |||||||||||| |||||| ||||||||| |||||||||||    
T  8867829 taagaaagttgatatttctattaaatttgtttgtaattactattatttttacgattttatcctttaagagagag 8867756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 752 - 879
Target Start/End: Original strand, 16108208 - 16108337
Alignment:
Q  752 aaacatatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactat 850  Q
    |||| |||||| ||||||||| ||| |||| ||  ||||||  ||||| ||||  ||||||||||| |||  | |||||||| |||| | |||| |||||    
T  16108208 aaacttatactccctccgtccctaattataagacccttttgttaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaatcactat 16108307  T
Q  851 tagttttaca-ttttatccttaagagagag 879  Q
    |  ||||||| |||||||||||||||||||    
T  16108308 tgtttttacaattttatccttaagagagag 16108337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 806 - 870
Target Start/End: Original strand, 22302574 - 22302639
Alignment:
Q  806 attaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatcctt 870  Q
    |||||||||||||||   |||||||||||||| | |||||| ||||| |||||| |||||||||||    
T  22302574 attaagaaagttgataagagtattaaatttgtttgtaattattattatttttacaattttatcctt 22302639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 87; Significance: 3e-41; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 17761 - 17639
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  17761 tactacctccgtccttaaatataggagcattttgccaaaattgcggagattaagaaagttgattgtagtattaaatttgtatataattactattgttttt 17662  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  17661 acaattttatccttaagagagag 17639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 85; Significance: 5e-40; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 11401 - 11556
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||  ||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  11401 atactacctccgtctctaaatataggagcattttgtcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattgtttt 11500  T
Q  857 tac-attttatccttaagaga-gagtaatttatgttt--cacataatatttattgt 908  Q
    ||| ||||||| ||||||||| || ||||||||||||   ||||||||||||||||    
T  11501 tacaattttatacttaagagaggattaatttatgttttcaacataatatttattgt 11556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 5e-37; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 759 - 876
Target Start/End: Original strand, 2364409 - 2364528
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||||||||||||||| || | |||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  2364409 tactacctccgtccctaaatataggagtcttttgcaaaaattgcagagattaagaaagttggttgtagcattaaatttgtatataattactattattttt 2364508  T
Q  858 ac-attttatccttaagaga 876  Q
    || |||||||||||||||||    
T  2364509 acaattttatccttaagaga 2364528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 4175539 - 4175417
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||    
T  4175539 tactacctccgtccctaaatataggagccttttgctaaaatcacggagattaagaaagttggttgtaatattaaatttgtataaaattactattattttt 4175440  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  4175439 acaattttatccttaagagagag 4175417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 759 - 878
Target Start/End: Original strand, 13321068 - 13321189
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||| |||||| |||||||||||| ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  13321068 tactaccgccgtccctaaatataggagccttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 13321167  T
Q  858 ac-attttatccttaagagaga 878  Q
    || |||||||||||||||||||    
T  13321168 acaattttatccttaagagaga 13321189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 752 - 879
Target Start/End: Complemental strand, 17992293 - 17992164
Alignment:
Q  752 aaacatatactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactat 850  Q
    ||||| ||||||||||||||  |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17992293 aaacacatactacctccgtcactaaatatatgagccttttgctaaaattgcggagattaagaaagttgattgtagtattaaatttgtatataattactat 17992194  T
Q  851 tagttttac-attttatccttaagagagag 879  Q
    |  |||||| ||||||| ||||||||||||    
T  17992193 tgtttttacaattttattcttaagagagag 17992164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 891
Target Start/End: Original strand, 6418392 - 6418529
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||  ||||    
T  6418392 tactacctccgtccctaaatataggagccttttgctaaaatcacggagattaagaaagttggttgtaatattaaatttgtataaaattactattgttttt 6418491  T
Q  858 ac-attttatccttaagagagag---taatttatgttt 891  Q
    || ||||||||||||||||||||   ||||||||||||    
T  6418492 acaattttatccttaagagagagagttaatttatgttt 6418529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 759 - 880
Target Start/End: Original strand, 8217461 - 8217584
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||| |||||||| ||  ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  8217461 tactacctccgtccctaaatatatgaaccttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 8217560  T
Q  858 ac-attttatccttaagagagagt 880  Q
    || |||||||||||||||||||||    
T  8217561 acaattttatccttaagagagagt 8217584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 9038937 - 9038815
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||  ||||    
T  9038937 tactccctccgtccctaaatataggagtcttttgccaaaattgcggagattaagaaagttggttgtagtattaaatttctatataattactattgttttt 9038838  T
Q  858 a-cattttatccttaagagagag 879  Q
    |  ||||||||||||||||||||    
T  9038837 ataattttatccttaagagagag 9038815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 22998785 - 22998907
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||| ||| |||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  22998785 tactacctccctccctaaatataagagccttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 22998884  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  22998885 acaattttatccttaagagagag 22998907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 23789619 - 23789497
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||| ||| |||||||| ||| |||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||    
T  23789619 tactacctccctccctaaatataagagccttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgtatataattactattgttttt 23789520  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||||||||||    
T  23789519 acaattttatccttaagagagag 23789497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 8345526 - 8345405
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||| |||||||| | |||| |||||| ||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||    
T  8345526 tactatctccgtccctgaata-aggagtattttgtcaaaattacagagattaaaaaagttggttgtagtattaaatttgtatataattactattattttt 8345428  T
Q  858 ac-attttatccttaagagagag 879  Q
    || |||||||| |||||||||||    
T  8345427 acaattttatctttaagagagag 8345405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 759 - 879
Target Start/End: Original strand, 28980595 - 28980717
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||| ||| |||||||| |||  |||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  28980595 tactacctccatccctaaatataagagctttttgccaaaattgcggagattaagaaagttagttgtagtattaaatttgtatataattactattgttttt 28980694  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||| ||||||||    
T  28980695 acaattttatccttgagagagag 28980717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 758 - 851
Target Start/End: Original strand, 8637052 - 8637148
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgt--atataattactatt 851  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||||    
T  8637052 atactacttccgttcttaaatataggagtcttttgtcaaaattacggagattaagaaagttagttgtagtattaaatttgttaatataattactatt 8637148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 4823266 - 4823112
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||  ||| ||||||||  |||||||||| ||| | ||||||||||||||| ||| | |||||||||||||| |||||||||||  ||||    
T  4823266 tactacctccgtctctaattataggagctttttgcaaaaattaagaagattaagaaagttggttgcaatattaaatttgtatgtaattactattgttttt 4823167  T
Q  858 a-cattttatccttaagagagag-taatttatgttt--cacataatatttattgt 908  Q
    |  |||||||||||||||||||| ||||||||||||   ||||||||||||||||    
T  4823166 ataattttatccttaagagagagttaatttatgttttcaacataatatttattgt 4823112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 772 - 880
Target Start/End: Complemental strand, 22710555 - 22710438
Alignment:
Q  772 cttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaa-------tttgtatataattactattagttttac-att 862  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||       |||||||||||||||||||  |||||| |||    
T  22710555 cttaaatataggagtcttttgtcaaaattgcggagattaagaaagttggttgtagtattaaatttgaaatttgtatataattactattgtttttacaatt 22710456  T
Q  863 ttatccttaagagagagt 880  Q
    ||||||||||||||||||    
T  22710455 ttatccttaagagagagt 22710438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 28235942 - 28236065
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||| |||| ||||| |||||||||||| ||||||| ||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||||||  |||    
T  28235942 ataccaccttcgtccctaaatataggagccttttgccaaaattgtggagattgagaaagttggttgtggtattaaatttgtatataattactattgtttt 28236041  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||| ||||    
T  28236042 tacaattttatccttaagaaagag 28236065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 777 - 891
Target Start/End: Complemental strand, 27581664 - 27581546
Alignment:
Q  777 atataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaaga 874  Q
    |||||||||||||||  |||| |||||||||||||||| |||| ||||||||||||||||||||||||||||| ||  |||||| |||||||||||||||    
T  27581664 atataggagtcttttataaaaattacggagattaagaa-gttggttgtagtattaaatttgtatataattactgttgtttttacaattttatccttaaga 27581566  T
Q  875 gagag---taatttatgttt 891  Q
    |||||   ||||||||||||    
T  27581565 gagagagttaatttatgttt 27581546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 778 - 908
Target Start/End: Complemental strand, 11162131 - 11161992
Alignment:
Q  778 tataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagag 875  Q
    ||||||||  |||||||||| ||||||| ||||||||||||| |||||||||||||||| ||| |||||||||||  |||||| ||||||||||||||||    
T  11162131 tataggagctttttgcaaaaattacggaaattaagaaagttggttgtagtattaaatttctatgtaattactattgtttttacaattttatccttaagag 11162032  T
Q  876 agag-----taatttatgttt--cacataatatttattgt 908  Q
    ||||     ||||||||||||   ||||||||||||||||    
T  11162031 agagagagttaatttatgttttcaacataatatttattgt 11161992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 756 - 851
Target Start/End: Original strand, 29293559 - 29293654
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttgcaaaatt-acggagattaagaaagttgattgtagtattaaatttgtatataattactatt 851  Q
    ||||||||| ||||||| ||||||||  ||| |||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29293559 atatactac-tccgtccctaaatataaaagttttttgcaaaaatgacggagattaagaaagttggttgtagtattaaatttgtatataattactatt 29293654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 794 - 908
Target Start/End: Complemental strand, 11200855 - 11200735
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagagag---taatttatgt 889  Q
    ||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||  |||||| ||| ||||||||||||||||   ||||||||||    
T  11200855 aaaattacggaaattaagaaagttggctgtagtattaaatttttatataattactattgattttacaattgtatccttaagagagagagttaatttatgt 11200756  T
Q  890 tt--cacataatatttattgt 908  Q
    ||   ||||||||||||||||    
T  11200755 tttcaacataatatttattgt 11200735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 759 - 908
Target Start/End: Complemental strand, 32615284 - 32615128
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||||||||||||  ||| |||| || ||||||| |||||| ||||| ||||||||| |||||  || |||||||||||| |||||||||||||  ||||    
T  32615284 tactacctccgtctctaattatatgactcttttgtcaaaatcacggaaattaagaaaattgataataatattaaatttgtttataattactattgttttt 32615185  T
Q  858 ac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    || ||||||||||||||||||||   ||||||||||||   ||||||||||||||||    
T  32615184 acaattttatccttaagagagagagttaatttatgttttcaacataatatttattgt 32615128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 794 - 891
Target Start/End: Complemental strand, 14630162 - 14630063
Alignment:
Q  794 aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagagag-agtaatttatgttt 891  Q
    ||||||||||||||||||||||| | ||||| |||||||||| | |||||||| ||||| |||||| |||||||||||||||||| | ||||||||||||    
T  14630162 aaaattacggagattaagaaagtcggttgtaatattaaatttatgtataattattattatttttacaattttatccttaagagagaattaatttatgttt 14630063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 763 - 891
Target Start/End: Complemental strand, 27310725 - 27310594
Alignment:
Q  763 acctccgtccttaaatataggagtcttttgcaaaa-ttacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttta-ca 860  Q
    ||||| |||| |||||||||||| |||||  |||| |||  |||||||||||||||  ||||||||||||||||||||||||||||| ||  |||||  |    
T  27310725 acctcagtccctaaatataggagccttttataaaaattatagagattaagaaagtttgttgtagtattaaatttgtatataattactgttgtttttataa 27310626  T
Q  861 ttttatccttaagagaga-gtaatttatgttt 891  Q
    ||||||||||||||||||  ||||||||||||    
T  27310625 ttttatccttaagagagatttaatttatgttt 27310594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 106 - 196
Target Start/End: Original strand, 30326677 - 30326767
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtt 196  Q
    |||||| | |||||||||| || |||||||||||||||||   || |||||||||| ||||||||||||||||| ||||||||||||||||    
T  30326677 tttaaaatggaaattttatcttgggatttgtgtattcaacacattgaaacatcaaagaacaactttttctacatgaaagttatcaattgtt 30326767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 758 - 908
Target Start/End: Original strand, 33012404 - 33012561
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||| ||| |||||||||||||| ||||| |||||||  |  ||||||||||||| | ||| |||||||||||| |||||||| ||||  |||    
T  33012404 atactacctccatccctaaatataggagtcatttgctaaaattataggaattaagaaagttggtagtaatattaaatttgtttataattaatattgtttt 33012503  T
Q  857 tac-attttatccttaagagagag---taatttatgttt--cacataatatttattgt 908  Q
    ||| ||||| || |||| ||||||   ||||||||||||   ||||||||||||||||    
T  33012504 tacaattttgtctttaaaagagagagttaatttatgttttcaacataatatttattgt 33012561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 31597605 - 31597531
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||||||   ||||||||| |||||  ||||||||||||||||||||||| ||||||||||||||||    
T  31597605 atttgtgcattcaacacattaaaacattaaaaagtaactttttctacataaaagttataaattgtttttattttt 31597531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 205
Target Start/End: Original strand, 342961 - 343050
Alignment:
Q  116 aaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttt 205  Q
    ||||||| |||| | |||| ||||||||||   || |||||| |||||| |||||||| | ||||||||||||||||||||| |||||||    
T  342961 aaattttgttttggaatttatgtattcaacacattgaaacattaaaaaataactttttatgcataaaagttatcaattgtttctattttt 343050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 2801303 - 2801392
Alignment:
Q  131 atttgtgtattcaaccttttaaaacatcaaaaaacaactttt-tctacataaaagttatcaattgtttttatttttaatttgaatcattaacaa 223  Q
    |||| ||||||||||   ||||||||| |||||  ||||||| ||||||||||||||||||||||||| |||||    ||||||||||||||||    
T  2801303 atttatgtattcaacacattaaaacattaaaaagtaacttttttctacataaaagttatcaattgtttctattt----tttgaatcattaacaa 2801392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 24396873 - 24396782
Alignment:
Q  113 tagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttt 204  Q
    |||||||||||| |||| ||| ||||||||||    || |||||| ||||||||||||| | || || ||||||||||||||||| ||||||    
T  24396873 tagaaattttatcttagaattcgtgtattcaaaacattgaaacattaaaaaacaactttatttatatgaaagttatcaattgtttctatttt 24396782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 205
Target Start/End: Original strand, 2817240 - 2817340
Alignment:
Q  106 tttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaact-ttttctacataaaagttatcaattgtttttatttt 204  Q
    |||||| |||||||||| |  | | |||||| ||||||||   |||||||||||||||  |||| |||| ||||||||||||||||| ||||| ||||||    
T  2817240 tttaaaatagaaattttttcctggaatttgtttattcaacacgttaaaacatcaaaaagtaactattttttacataaaagttatcaactgtttctatttt 2817339  T
Q  205 t 205  Q
    |    
T  2817340 t 2817340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 210
Target Start/End: Original strand, 28738471 - 28738574
Alignment:
Q  107 ttaaagtagaaattttattttaggatttgtgtattcaaccttttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttattttta 206  Q
    ||||||||||||||||||||||  | |||||||||||||   || ||| || |||| ||||||||||| | |||||| |||| || ||||| | |||| |    
T  28738471 ttaaagtagaaattttattttaaaaattgtgtattcaacacattcaaatattaaaacacaactttttcgatataaaacttattaactgtttcttttttaa 28738570  T
Q  207 attt 210  Q
    ||||    
T  28738571 attt 28738574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 880
Target Start/End: Original strand, 31149984 - 31150111
Alignment:
Q  756 atatactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagt 854  Q
    ||||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| |||| ||  | ||||||||| ||| | |||||||||||  |    
T  31149984 atatactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtttatatttgtattaaatatgtttgtaattactattgtt 31150083  T
Q  855 tttac-attttatcc-ttaagagagagt 880  Q
    ||||| ||||||||| ||||||||||||    
T  31150084 tttacaattttatcctttaagagagagt 31150111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 880
Target Start/End: Complemental strand, 13866892 - 13866767
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  |||    
T  13866892 atactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgtttt 13866793  T
Q  857 tac-attttatcc-ttaagagagagt 880  Q
    ||| ||||||||| ||||||||||||    
T  13866792 tacaattttatcctttaagagagagt 13866767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 891
Target Start/End: Complemental strand, 15498926 - 15498789
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||||||| |||  | ||||||||| ||| | |||||| ||||  |||    
T  15498926 atactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagaaagtggatatttgtattaaatatgtttgtaattagtattgtttt 15498827  T
Q  857 tac-attttatcc-ttaagagagag-taatttatgttt 891  Q
    ||| ||||||||| ||||||||||| | ||||||||||    
T  15498826 tacaattttatcctttaagagagagatgatttatgttt 15498789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 870
Target Start/End: Complemental strand, 16122552 - 16122439
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgcaaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    ||||||||||||||| ||| |||| ||  |||||| ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  ||||    
T  16122552 atactacctccgtccctaattataagacccttttgaaaaataacgggaattaagatagtagatatttgtattaaatatgtttttaattactattgttttt 16122453  T
Q  858 ac-attttatcctt 870  Q
    || |||||||||||    
T  16122452 acaattttatcctt 16122439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 246752 - 246630
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| |||||||||||| ||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||    
T  246752 tacttcctccgtccctaaatataggagccttttgccaaaattgcggagattaagaaagttagttgtagtattaaatttgtatataattactattgttttt 246653  T
Q  858 ac-attttatccttaagagagag 879  Q
    || ||||||||||||| ||||||    
T  246652 acaattttatccttaaaagagag 246630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 506 - 640
Target Start/End: Complemental strand, 46764 - 46630
Alignment:
Q  506 gagcagttttgtcccgaaagctccgtgaattgccgtcgtccaataaaaacttgctctggtcgaaaataagggagtcatgggtgtaagttttggtcaaact 605  Q
    |||||||||||||||||| |||  |  |||||||| ||||||||||||||| ||| ||  || |||||| ||| |||||||||||||||||||||||| |    
T  46764 gagcagttttgtcccgaatgctttgcaaattgccgccgtccaataaaaactcgctttgtccggaaataaaggaatcatgggtgtaagttttggtcaaatt 46665  T
Q  606 tgggatttagtagcattaaaatttcattcaagaaa 640  Q
    || |||| |||||||||||||||||||||| ||||    
T  46664 tgcgattcagtagcattaaaatttcattcaggaaa 46630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 758 - 879
Target Start/End: Original strand, 36104 - 36227
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    |||| |||| ||||| |||||||||||| ||||||| ||||||  ||||||| ||||||||| |||| |||||||||||||||||||||||||||  |||    
T  36104 ataccaccttcgtccctaaatataggagccttttgccaaaattgtggagattgagaaagttggttgtggtattaaatttgtatataattactattgtttt 36203  T
Q  857 tac-attttatccttaagagagag 879  Q
    ||| ||||||||||||||| ||||    
T  36204 tacaattttatccttaagaaagag 36227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 793 - 876
Target Start/End: Original strand, 537 - 621
Alignment:
Q  793 caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttttac-attttatccttaagaga 876  Q
    ||||||||| || ||||||| ||||||| |||||||||||||| |||||||||||||||  |||||| ||||| |||||||||||    
T  537 caaaattaccgaaattaagatagttgatagtagtattaaatttatatataattactattgtttttacaattttgtccttaagaga 621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 760 - 872
Target Start/End: Original strand, 103804 - 103918
Alignment:
Q  760 actacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttta 858  Q
    ||||||||| ||| ||| |||||||   |||||| ||||||||||  ||||| ||| |||||  ||||||||||||||| ||||||| |||||  |||||    
T  103804 actacctccatccctaattataggaccattttgccaaaattacgggaattaaaaaaattgataatagtattaaatttgtttataattgctattgttttta 103903  T
Q  859 c-attttatccttaa 872  Q
    | |||||||||||||    
T  103904 caattttatccttaa 103918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 1507 - 1565
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||| |||||| ||| ||||||||||||| ||||| ||||||||| | ||||||    
T  1507 ttaaaacatgaaaaaataacattttctacataaatgttattaattgttttcaattttaa 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 1507 - 1565
Alignment:
Q  149 ttaaaacatcaaaaaacaactttttctacataaaagttatcaattgtttttatttttaa 207  Q
    ||||||||| |||||| ||| ||||||||||||| ||||| ||||||||| | ||||||    
T  1507 ttaaaacatgaaaaaataacattttctacataaatgttattaattgttttcaattttaa 1565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 759 - 879
Target Start/End: Complemental strand, 47937 - 47815
Alignment:
Q  759 tactacctccgtccttaaatataggagtcttttgc-aaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagtttt 857  Q
    |||| ||||||||| ||| |||| ||  ||||||| ||||| ||||  ||||||||||| |||  | |||||||| |||| | |||| ||||||  ||||    
T  47937 tactccctccgtccctaattataagatccttttgctaaaatcacgggaattaagaaagtggatatttgtattaaagttgtttgtaatcactattgttttt 47838  T
Q  858 aca-ttttatccttaagagagag 879  Q
    ||| |||||||||||||||||||    
T  47837 acaattttatccttaagagagag 47815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 758 - 880
Target Start/End: Original strand, 6350 - 6475
Alignment:
Q  758 atactacctccgtccttaaatataggagtcttttg-caaaattacggagattaagaaagttgattgtagtattaaatttgtatataattactattagttt 856  Q
    ||||||||||||||| ||| |||||||  ||||||  ||||| ||||  ||||||| ||| |||  | ||||||||| ||| | |||||||||||  |||    
T  6350 atactacctccgtccctaattataggacccttttgaaaaaataacgggaattaagatagtggatatttgtattaaatatgtttgtaattactattgtttt 6449  T
Q  857 tac-attttatcc-ttaagagagagt 880  Q
    ||| ||||||||| ||||||||||||    
T  6450 tacaattttatcctttaagagagagt 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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