View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4981-Insertion-1 (Length: 1017)

Name: NF4981-Insertion-1
Description: NF4981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4981-Insertion-1
NF4981-Insertion-1
[»] chr6 (30 HSPs)
chr6 (266-677)||(12635943-12636350)
chr6 (7-242)||(12635673-12635908)
chr6 (743-936)||(12636416-12636617)
chr6 (113-242)||(30788869-30788996)
chr6 (112-242)||(5253239-5253369)
chr6 (112-242)||(8932625-8932755)
chr6 (112-242)||(8944091-8944221)
chr6 (112-242)||(21898612-21898742)
chr6 (114-242)||(6606113-6606241)
chr6 (126-238)||(12606408-12606520)
chr6 (112-242)||(13036020-13036150)
chr6 (112-242)||(19089462-19089592)
chr6 (456-582)||(33293470-33293599)
chr6 (112-242)||(10311485-10311615)
chr6 (116-241)||(13468901-13469026)
chr6 (126-242)||(29333155-29333270)
chr6 (112-242)||(2271319-2271447)
chr6 (175-242)||(9633641-9633708)
chr6 (115-242)||(29444781-29444908)
chr6 (112-242)||(8611990-8612120)
chr6 (112-242)||(14107374-14107504)
chr6 (529-582)||(1825887-1825940)
chr6 (141-242)||(3601077-3601178)
chr6 (130-205)||(3587998-3588073)
chr6 (112-239)||(9179755-9179882)
chr6 (112-221)||(9366460-9366569)
chr6 (112-241)||(19230576-19230703)
chr6 (112-221)||(24671903-24672012)
chr6 (184-242)||(14783436-14783494)
chr6 (112-209)||(21016800-21016897)
[»] chr4 (53 HSPs)
chr4 (292-582)||(24899084-24899382)
chr4 (421-579)||(41495957-41496112)
chr4 (110-242)||(47078421-47078553)
chr4 (112-242)||(5472864-5472994)
chr4 (112-239)||(29895752-29895879)
chr4 (112-242)||(38165992-38166122)
chr4 (292-581)||(56328958-56329246)
chr4 (131-242)||(3159485-3159596)
chr4 (112-242)||(36262783-36262911)
chr4 (112-232)||(1446791-1446911)
chr4 (131-242)||(49260681-49260792)
chr4 (115-242)||(1940793-1940917)
chr4 (131-242)||(7246662-7246773)
chr4 (112-239)||(20532428-20532555)
chr4 (112-231)||(41162909-41163028)
chr4 (112-242)||(29588701-29588831)
chr4 (115-236)||(41339417-41339538)
chr4 (126-242)||(40272347-40272463)
chr4 (112-242)||(2559272-2559402)
chr4 (121-239)||(3507245-3507362)
chr4 (112-242)||(55920999-55921129)
chr4 (146-242)||(30317232-30317328)
chr4 (131-242)||(20128293-20128404)
chr4 (112-215)||(24166415-24166518)
chr4 (131-242)||(38075417-38075528)
chr4 (112-231)||(43458578-43458697)
chr4 (131-242)||(43468331-43468442)
chr4 (112-238)||(6779176-6779302)
chr4 (112-221)||(53599025-53599134)
chr4 (126-242)||(8889001-8889117)
chr4 (138-242)||(42722395-42722498)
chr4 (112-242)||(27248393-27248521)
chr4 (116-231)||(36145242-36145357)
chr4 (131-221)||(48015110-48015200)
chr4 (112-241)||(14123981-14124110)
chr4 (456-560)||(18102804-18102906)
chr4 (151-235)||(20354641-20354725)
chr4 (126-242)||(42722593-42722709)
chr4 (175-242)||(8424582-8424649)
chr4 (151-242)||(40780877-40780968)
chr4 (115-242)||(52950050-52950177)
chr4 (135-241)||(295550-295655)
chr4 (112-242)||(4736562-4736692)
chr4 (115-212)||(33647689-33647786)
chr4 (114-242)||(20421741-20421868)
chr4 (117-221)||(38168227-38168330)
chr4 (194-242)||(50485990-50486038)
chr4 (112-231)||(3574473-3574592)
chr4 (115-242)||(18531487-18531614)
chr4 (149-215)||(10541018-10541084)
chr4 (173-231)||(17080069-17080127)
chr4 (112-161)||(6032737-6032786)
chr4 (146-187)||(13436811-13436852)
[»] chr3 (57 HSPs)
chr3 (466-587)||(5411360-5411481)
chr3 (112-241)||(25294920-25295049)
chr3 (112-239)||(13893886-13894013)
chr3 (112-242)||(30767264-30767394)
chr3 (378-535)||(38086088-38086245)
chr3 (126-242)||(47219118-47219234)
chr3 (112-227)||(10855344-10855459)
chr3 (131-242)||(47749122-47749232)
chr3 (112-242)||(15320146-15320276)
chr3 (112-241)||(29135873-29136002)
chr3 (126-242)||(15795511-15795626)
chr3 (148-242)||(3507550-3507644)
chr3 (112-242)||(26207818-26207948)
chr3 (112-242)||(29127879-29128009)
chr3 (112-242)||(29762172-29762302)
chr3 (112-242)||(45877414-45877544)
chr3 (112-242)||(51682971-51683101)
chr3 (112-232)||(42412801-42412921)
chr3 (131-239)||(49198330-49198438)
chr3 (115-242)||(49543482-49543609)
chr3 (147-239)||(8164548-8164640)
chr3 (112-242)||(45402368-45402495)
chr3 (126-242)||(47471806-47471921)
chr3 (134-242)||(55069696-55069804)
chr3 (131-242)||(7328823-7328933)
chr3 (110-241)||(7650185-7650316)
chr3 (300-427)||(38086345-38086470)
chr3 (115-221)||(6462375-6462481)
chr3 (112-242)||(28572228-28572358)
chr3 (112-242)||(35315916-35316046)
chr3 (112-242)||(51060298-51060428)
chr3 (112-242)||(54261186-54261316)
chr3 (112-241)||(10040517-10040645)
chr3 (112-205)||(11687163-11687256)
chr3 (112-205)||(48341980-48342073)
chr3 (126-214)||(52364845-52364933)
chr3 (112-242)||(41630529-41630659)
chr3 (176-242)||(50405620-50405686)
chr3 (114-198)||(7612987-7613071)
chr3 (191-242)||(43330749-43330800)
chr3 (116-242)||(3136711-3136836)
chr3 (112-230)||(39849032-39849149)
chr3 (149-242)||(7310720-7310813)
chr3 (149-242)||(26361984-26362077)
chr3 (112-237)||(31072838-31072963)
chr3 (112-205)||(45450501-45450591)
chr3 (141-205)||(13167497-13167561)
chr3 (126-230)||(33251636-33251740)
chr3 (147-242)||(30045816-30045911)
chr3 (114-165)||(33560822-33560873)
chr3 (126-221)||(35923661-35923756)
chr3 (112-199)||(37092565-37092652)
chr3 (191-242)||(49021220-49021271)
chr3 (176-242)||(2029284-2029350)
chr3 (152-238)||(26043812-26043898)
chr3 (112-237)||(32873571-32873695)
chr3 (112-205)||(49082784-49082877)
[»] chr7 (43 HSPs)
chr7 (112-242)||(48804646-48804776)
chr7 (292-454)||(22620909-22621070)
chr7 (112-238)||(34659189-34659315)
chr7 (112-242)||(10047892-10048022)
chr7 (131-242)||(38578883-38578994)
chr7 (112-242)||(21530711-21530841)
chr7 (112-242)||(47341839-47341969)
chr7 (112-241)||(4195219-4195348)
chr7 (131-242)||(17748398-17748509)
chr7 (112-242)||(5069831-5069961)
chr7 (112-242)||(42210278-42210408)
chr7 (112-216)||(1797423-1797527)
chr7 (116-242)||(13095825-13095951)
chr7 (112-242)||(22993383-22993513)
chr7 (112-242)||(43346795-43346925)
chr7 (126-239)||(1605918-1606031)
chr7 (112-205)||(18785632-18785725)
chr7 (112-242)||(4228770-4228897)
chr7 (126-242)||(21190796-21190912)
chr7 (416-540)||(37486170-37486294)
chr7 (112-242)||(16802086-16802216)
chr7 (112-214)||(43925475-43925577)
chr7 (134-242)||(36619270-36619378)
chr7 (131-242)||(14535273-14535384)
chr7 (126-221)||(43862009-43862104)
chr7 (116-242)||(27028246-27028372)
chr7 (115-221)||(39420804-39420909)
chr7 (112-242)||(42032059-42032189)
chr7 (112-241)||(19914720-19914848)
chr7 (157-238)||(41945482-41945562)
chr7 (126-242)||(22973944-22974060)
chr7 (126-242)||(37514898-37515014)
chr7 (112-215)||(26423330-26423433)
chr7 (110-205)||(45447931-45448026)
chr7 (112-231)||(45960030-45960148)
chr7 (147-242)||(49142685-49142780)
chr7 (112-242)||(23658143-23658272)
chr7 (114-242)||(8734702-8734830)
chr7 (112-199)||(22268088-22268175)
chr7 (191-242)||(24983435-24983486)
chr7 (112-242)||(27875104-27875233)
chr7 (173-242)||(28396176-28396245)
chr7 (126-242)||(39474916-39475033)
[»] chr2 (50 HSPs)
chr2 (112-242)||(6358167-6358297)
chr2 (417-563)||(16644421-16644571)
chr2 (112-242)||(25540420-25540550)
chr2 (112-240)||(3643905-3644033)
chr2 (126-242)||(10823034-10823150)
chr2 (112-239)||(38005362-38005489)
chr2 (131-242)||(44139463-44139574)
chr2 (112-242)||(45263683-45263813)
chr2 (111-242)||(41220594-41220725)
chr2 (112-242)||(34356166-34356296)
chr2 (112-242)||(38962723-38962853)
chr2 (112-241)||(331461-331590)
chr2 (127-240)||(9360766-9360879)
chr2 (145-242)||(12455303-12455400)
chr2 (112-242)||(20612550-20612682)
chr2 (126-242)||(35946713-35946828)
chr2 (112-230)||(8410091-8410209)
chr2 (112-242)||(18902546-18902676)
chr2 (344-502)||(45134833-45134991)
chr2 (112-241)||(21286404-21286533)
chr2 (126-242)||(11069852-11069968)
chr2 (115-231)||(44945557-44945672)
chr2 (112-239)||(39806904-39807031)
chr2 (112-242)||(22593095-22593224)
chr2 (112-242)||(37560133-37560263)
chr2 (112-242)||(41031922-41032051)
chr2 (112-242)||(42770667-42770797)
chr2 (136-239)||(7787040-7787143)
chr2 (112-231)||(19976834-19976953)
chr2 (112-242)||(7747234-7747364)
chr2 (112-242)||(12864184-12864314)
chr2 (112-241)||(2550828-2550957)
chr2 (131-227)||(15079462-15079558)
chr2 (131-242)||(3811707-3811818)
chr2 (112-242)||(10026632-10026762)
chr2 (112-242)||(10046493-10046622)
chr2 (456-560)||(37860413-37860515)
chr2 (131-235)||(16034916-16035020)
chr2 (174-242)||(27725962-27726030)
chr2 (126-242)||(34346303-34346419)
chr2 (131-242)||(10669571-10669682)
chr2 (112-231)||(29422175-29422294)
chr2 (151-242)||(43303308-43303399)
chr2 (112-226)||(21180346-21180460)
chr2 (151-240)||(29653626-29653714)
chr2 (131-242)||(14169625-14169736)
chr2 (131-242)||(28616395-28616506)
chr2 (192-242)||(21641990-21642040)
chr2 (112-221)||(13026448-13026557)
chr2 (173-242)||(16325616-16325685)
[»] scaffold0002 (4 HSPs)
scaffold0002 (112-240)||(319385-319513)
scaffold0002 (141-205)||(139427-139491)
scaffold0002 (115-242)||(536-663)
scaffold0002 (126-187)||(412097-412158)
[»] scaffold0170 (1 HSPs)
scaffold0170 (112-242)||(9808-9938)
[»] chr8 (28 HSPs)
chr8 (112-238)||(2467138-2467264)
chr8 (112-242)||(14666087-14666217)
chr8 (112-215)||(38922457-38922560)
chr8 (112-242)||(8141066-8141196)
chr8 (112-242)||(15884572-15884701)
chr8 (112-242)||(44893294-44893424)
chr8 (112-221)||(1013014-1013123)
chr8 (145-242)||(6042818-6042915)
chr8 (112-238)||(17981405-17981531)
chr8 (112-242)||(43032865-43032995)
chr8 (112-242)||(45521133-45521262)
chr8 (114-242)||(6100438-6100566)
chr8 (112-229)||(13085488-13085605)
chr8 (112-239)||(9860014-9860142)
chr8 (115-242)||(2964043-2964170)
chr8 (112-239)||(24837206-24837333)
chr8 (112-198)||(6940522-6940608)
chr8 (112-242)||(18373974-18374104)
chr8 (134-242)||(10927592-10927700)
chr8 (112-229)||(7673686-7673800)
chr8 (112-231)||(33401826-33401945)
chr8 (112-215)||(34846778-34846880)
chr8 (131-229)||(44031464-44031567)
chr8 (172-242)||(11298283-11298353)
chr8 (173-242)||(4479312-4479381)
chr8 (112-242)||(17845697-17845824)
chr8 (126-215)||(11785894-11785982)
chr8 (500-541)||(39587287-39587328)
[»] chr5 (47 HSPs)
chr5 (112-241)||(19572685-19572814)
chr5 (112-242)||(1538392-1538522)
chr5 (112-242)||(42861234-42861364)
chr5 (112-240)||(30349540-30349668)
chr5 (115-239)||(38897738-38897861)
chr5 (112-239)||(20525799-20525926)
chr5 (112-242)||(25417199-25417329)
chr5 (116-242)||(42086292-42086418)
chr5 (112-241)||(7866542-7866671)
chr5 (114-241)||(1898964-1899085)
chr5 (129-241)||(20682634-20682746)
chr5 (135-238)||(12081892-12081995)
chr5 (112-235)||(14152011-14152134)
chr5 (112-242)||(4016271-4016401)
chr5 (112-242)||(9812833-9812963)
chr5 (126-239)||(5079306-5079419)
chr5 (112-205)||(5731973-5732066)
chr5 (150-242)||(9805003-9805095)
chr5 (112-216)||(28857089-28857193)
chr5 (115-242)||(8513483-8513610)
chr5 (112-215)||(26077102-26077205)
chr5 (163-242)||(32874799-32874878)
chr5 (115-241)||(11845818-11845944)
chr5 (112-242)||(12704975-12705105)
chr5 (111-215)||(15034036-15034139)
chr5 (145-231)||(42291532-42291618)
chr5 (110-231)||(7308391-7308512)
chr5 (112-242)||(18136292-18136426)
chr5 (149-242)||(23383655-23383748)
chr5 (158-231)||(24463913-24463986)
chr5 (115-239)||(30995085-30995209)
chr5 (112-231)||(37263202-37263320)
chr5 (112-231)||(39728348-39728467)
chr5 (112-242)||(2485158-2485287)
chr5 (126-239)||(3653933-3654044)
chr5 (145-231)||(18262645-18262731)
chr5 (131-209)||(20692913-20692991)
chr5 (141-239)||(40117405-40117503)
chr5 (112-242)||(41163476-41163605)
chr5 (135-239)||(7336604-7336708)
chr5 (134-238)||(14588637-14588741)
chr5 (131-242)||(9168269-9168379)
chr5 (116-215)||(13664225-13664324)
chr5 (112-166)||(6767143-6767197)
chr5 (149-239)||(21149732-21149822)
chr5 (112-242)||(35561834-35561964)
chr5 (116-166)||(35813090-35813140)
[»] chr1 (45 HSPs)
chr1 (114-241)||(18915830-18915957)
chr1 (112-231)||(43959849-43959968)
chr1 (112-242)||(10172988-10173118)
chr1 (112-242)||(41663873-41664003)
chr1 (112-221)||(48798108-48798217)
chr1 (126-242)||(33004032-33004148)
chr1 (131-241)||(37339799-37339910)
chr1 (116-242)||(8763956-8764082)
chr1 (112-242)||(26325773-26325903)
chr1 (112-242)||(49078075-49078205)
chr1 (134-242)||(50503378-50503486)
chr1 (115-242)||(40288494-40288621)
chr1 (112-242)||(5855483-5855613)
chr1 (112-242)||(11397906-11398035)
chr1 (112-242)||(30927744-30927874)
chr1 (112-242)||(33418132-33418262)
chr1 (115-201)||(34334353-34334439)
chr1 (112-241)||(9659197-9659325)
chr1 (110-231)||(10336475-10336596)
chr1 (173-242)||(21849222-21849291)
chr1 (114-237)||(10422751-10422874)
chr1 (127-242)||(14254285-14254400)
chr1 (420-522)||(2845974-2846076)
chr1 (112-242)||(17642021-17642151)
chr1 (126-242)||(32142863-32142978)
chr1 (116-239)||(12036764-12036887)
chr1 (115-238)||(31152680-31152803)
chr1 (115-213)||(2980977-2981075)
chr1 (126-231)||(18649380-18649485)
chr1 (117-242)||(34719742-34719867)
chr1 (126-242)||(15465940-15466056)
chr1 (131-215)||(47312943-47313026)
chr1 (112-215)||(6563402-6563505)
chr1 (131-242)||(12744540-12744651)
chr1 (131-242)||(12755530-12755641)
chr1 (134-205)||(16263528-16263599)
chr1 (131-210)||(45536688-45536767)
chr1 (112-242)||(32150939-32151069)
chr1 (117-242)||(16956432-16956557)
chr1 (131-235)||(13262063-13262167)
chr1 (114-242)||(45361899-45362027)
chr1 (116-230)||(34697300-34697414)
chr1 (112-221)||(32832-32941)
chr1 (114-215)||(34877953-34878054)
chr1 (459-536)||(47895811-47895888)
[»] scaffold0006 (1 HSPs)
scaffold0006 (115-242)||(68483-68607)
[»] scaffold0010 (1 HSPs)
scaffold0010 (173-242)||(155727-155796)
[»] scaffold0004 (2 HSPs)
scaffold0004 (132-239)||(7854-7961)
scaffold0004 (112-242)||(94996-95125)
[»] scaffold0291 (1 HSPs)
scaffold0291 (145-242)||(6851-6948)
[»] scaffold0384 (1 HSPs)
scaffold0384 (110-242)||(5934-6065)
[»] scaffold0376 (1 HSPs)
scaffold0376 (115-242)||(12636-12763)
[»] scaffold0316 (1 HSPs)
scaffold0316 (147-242)||(1630-1725)
[»] scaffold0079 (1 HSPs)
scaffold0079 (126-205)||(8152-8230)
[»] scaffold0012 (1 HSPs)
scaffold0012 (459-542)||(177463-177546)
[»] scaffold0086 (1 HSPs)
scaffold0086 (147-235)||(26181-26269)
[»] scaffold0262 (1 HSPs)
scaffold0262 (372-426)||(5505-5559)
[»] scaffold0050 (1 HSPs)
scaffold0050 (126-203)||(72610-72686)
[»] scaffold0016 (1 HSPs)
scaffold0016 (149-242)||(8717-8810)
[»] scaffold0005 (1 HSPs)
scaffold0005 (116-229)||(271103-271216)
[»] scaffold0341 (1 HSPs)
scaffold0341 (112-215)||(18595-18698)
[»] scaffold0029 (1 HSPs)
scaffold0029 (112-238)||(41007-41133)
[»] scaffold0009 (1 HSPs)
scaffold0009 (131-242)||(42848-42959)


Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 266 - 677
Target Start/End: Original strand, 12635943 - 12636350
Alignment:
Q  266 ttgttggagcgttacttggtactttttcatgggtcaaatatgttaaacatccaagtctaattgaagtggaattgaatgctatgaagaatgagtatgatgt 365  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12635943 ttgttggagcgttacttggtactttttcatgggtcaaatatgttaaacatccaagtctaattgaagtggaattgagtgctatgaagaatgagtatgatgt 12636042  T
Q  366 gagctatttaactaccaccttgaggacaaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataataatccaagtaga 465  Q
    ||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12636043 gagctattta----ccaccttgaggacaaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataatattccaagtaga 12636138  T
Q  466 taaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagagagatcttttgtgatgagtcattgg-aatg 564  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  12636139 taaagattataatgagttaattacattatatattttagaggtgagtcatcatgttttaagaggatttagagagatcttttgtgatgagtcattggaaatg 12636238  T
Q  565 tctatgatataaataatgtagtggtnnnnnnnnnnttatatcctcttgatttgataattatttatagtccaagtcgataaaaattatgatgagttaattc 664  Q
    || ||||| |||||||| |||||||          |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||    
T  12636239 tcaatgatgtaaataatatagtggt-aaaaaaaaattatatcctcttgatttgatgattatttatagtccaagtagataaaaattatgattagttaattc 12636337  T
Q  665 attttttattgtt 677  Q
    |||||||||||||    
T  12636338 attttttattgtt 12636350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 7 - 242
Target Start/End: Original strand, 12635673 - 12635908
Alignment:
Q  7 atccccaagcttaagatttatggacaatggatgtctagtggagaaaggaggctctcaacagtggattgaatcatttatcaattgctggaaaatttgttgg 106  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12635673 atccccaagcttaagatttatggacaatagatgtctagtggagaaaggaggctctcaacagtggattgaatcatttatcaattgctggaaaatttgttgg 12635772  T
Q  107 agcgttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctat 206  Q
    ||||| || |||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||  || |||||||||||||| |||||||||||||||     
T  12635773 agcgtaccggtggcaagatgctccttccaaggacgtatccggggaataccaggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctac 12635872  T
Q  207 gcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||| ||||| |||| |||||||| |||||||||||    
T  12635873 gcacaagccggattagtcgcccactattggtgggtc 12635908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 743 - 936
Target Start/End: Original strand, 12636416 - 12636617
Alignment:
Q  743 ggtgtgaatccatatcatctcatagatcatatt-gagtgttatatcctcttggcccccacaacatagtttttatacatcgaatcatttaaggttctttcc 841  Q
    |||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12636416 ggtgtgaatccatatcatctcacagatcatatttgagtattatatcctcttggcccccacaacatagtttttatacatcgaatcatttaaggttctttcc 12636515  T
Q  842 ctttgtcacatttgaatatttgattattaattatatcctttagaataa--------aatacagtatagttgaaaaattaacttgcacaccacaaaccctt 933  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||    
T  12636516 ctttgtcacatttgaatatttgattatt-attatatcctttagaataaaatacactaatacagtatagttgaaaaattaacttgcacaccacaaaccctt 12636614  T
Q  934 ttt 936  Q
    |||    
T  12636615 ttt 12636617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 113 - 242
Target Start/End: Complemental strand, 30788996 - 30788869
Alignment:
Q  113 ccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacga 212  Q
    |||||||||||  |||| |||||||||||||||||||||||| |||||||||||  ||   ||||||||| |||||  ||||||||||||||| ||||||    
T  30788996 ccagtggcaaggagctccttccaaggatgtatccggggaatatcgggtttgattctcat--ggaacaacgtttggccagtgcgcatgcctctaggcacga 30788899  T
Q  213 gccgaattattcgcccaccattggtgggtc 242  Q
    |||| |||| ||||||||| ||||||||||    
T  30788898 gccggattagtcgcccacctttggtgggtc 30788869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 5253369 - 5253239
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  5253369 tccaatggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 5253270  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  5253269 agccggattaatcgcccacctttggtgggtc 5253239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 8932625 - 8932755
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || |||||||||||||||||||||||| |||||| |||| |||  ||||||||| ||||||| ||||||||||||||| ||| |    
T  8932625 tccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatg 8932724  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| || |||||| ||| ||||||    
T  8932725 agccggattaatcacccacctttgatgggtc 8932755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 8944091 - 8944221
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || |||||||||||||||||||||||| |||||| |||| |||  ||||||||| ||||||| ||||||||||||||| ||| |    
T  8944091 tccagtggcaaggagttccttccaaggatgtatccggggaatatcgggttcgattcccagggggaacaacacttggctagtgcgcatgcctctacgcatg 8944190  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| || |||||| ||| ||||||    
T  8944191 agccggattaatcacccacctttgatgggtc 8944221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 21898612 - 21898742
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||   |||||||||||||||  ||||||||||||||| ||| |    
T  21898612 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 21898711  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||| || |||||||    
T  21898712 agccggattagtcgttcacctttagtgggtc 21898742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 6606241 - 6606113
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| ||||||||| ||||||||||||||||||||| ||||  ||  ||||||||| ||||||  |||  |||||||||| ||| |||    
T  6606241 cagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgag 6606142  T
Q  214 ccgaattattcgcccaccattggtgggtc 242  Q
    ||| |||| ||| ||||||||||||||||    
T  6606141 ccggattagtcgtccaccattggtgggtc 6606113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 126 - 238
Target Start/End: Original strand, 12606408 - 12606520
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||| | |||||||||||||||| | || ||||||||  |||||||||| |||||  ||||||||||||||| |||||||||| |||| |||    
T  12606408 gctccttccaagaacgtatccggggaataccagattcgatttccagggggaacaacgtttggccagtgcgcatgcctctacgcacgagccggattagtcg 12606507  T
Q  226 cccaccattggtg 238  Q
    |||||| ||||||    
T  12606508 cccacctttggtg 12606520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 13036150 - 13036020
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||| ||||||||| |||||| ||||| ||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  13036150 tccagtggcaaggagctccttccaaggacgtattcggggaatatcgggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatg 13036051  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| ||| |||| |||||||||||    
T  13036050 agccagattagtcgtccactattggtgggtc 13036020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 19089462 - 19089592
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||| |||||  ||||||| |||||| ||||||| |||||||| ||||||||| |||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  19089462 tccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacg 19089561  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| | ||| ||||||||||    
T  19089562 agccggattagtcgtctacctttggtgggtc 19089592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 456 - 582
Target Start/End: Original strand, 33293470 - 33293599
Alignment:
Q  456 tccaagtagataaagattatgatgagttaattacattatatattttagagg-tgagtcatcatgttctaaaagaatctagagagatc--ttttgtgatga 552  Q
    ||||||||  ||||||||||||||||||| ||  ||||  |||||||| || ||||||| |||| |||| ||| |||||||||||||  |||||||||||    
T  33293470 tccaagtaactaaagattatgatgagttagttgtattaggtattttagtggatgagtcaccatgctctagaaggatctagagagatcctttttgtgatga 33293569  T
Q  553 gtcattggaatgtctatgatataaataatg 582  Q
    |||||||||||| | ||| |||||||||||    
T  33293570 gtcattggaatgccaatgctataaataatg 33293599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 10311615 - 10311485
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||| |||||  |||| ||||||| | ||||||||||||||||||||| |||   ||| ||||||||||||||||  ||||||||| ||||| |||||    
T  10311615 tccagtagcaaggagctccttccaagaacgtatccggggaataccgggttcgatcctcaaggggaacaacgcttggccagtgcgcatgtctctacgcacg 10311516  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||    |||| |||| |||||||||||||||    
T  10311515 agttagattagtcgctcaccattggtgggtc 10311485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 116 - 241
Target Start/End: Original strand, 13468901 - 13469026
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||||| |||||||||||||||| ||||  ||| | |  |||||||||| ||||   |||| |||||||||| |||||||||    
T  13468901 gtggcaaggagctccttccaaggacgtatccggggaataccaggttcaattcctagggggaacaacgattggtcagtgcacatgcctctacgcacgagcc 13469000  T
Q  216 gaattattcgcccaccattggtgggt 241  Q
      |||| |||||||||||||||||||    
T  13469001 agattagtcgcccaccattggtgggt 13469026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 29333270 - 29333155
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| || |||||||||||||| ||||||||  |||||||||| |||||  ||||||||||||||| ||| ||||||||| | |||    
T  29333270 gctccttccaaggacgtacccagggaataccgggttcgatttccag-gggaacaacgtttggccagtgcgcatgcctctacgcatgagccgaatcagtcg 29333172  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||||| ||||    
T  29333171 tccacctttggtaggtc 29333155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 2271447 - 2271319
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||| |||||||||||||||| ||||  |  || ||||||||||| ||  ||||||||| ||||| |||||    
T  2271447 tccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgatt--ctcagagaacaacgcttagccagtgcgcatgtctctacgcacg 2271350  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||| ||||||    
T  2271349 agccggattagtcgtccacctttgatgggtc 2271319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 9633708 - 9633641
Alignment:
Q  175 gaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||  ||||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  9633708 gaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 9633641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 29444908 - 29444781
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| |||||| || ||| |||||| |||||||||| |||||| |  ||||||||||||||||  ||||||||||||||| ||| ||||    
T  29444908 agtggcaaggagctccttccaaagacgtacccgggggataccgggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagc 29444809  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| | | ||| | ||||||||||    
T  29444808 cggattagttgtccatctttggtgggtc 29444781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 8612120 - 8611990
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| | |   ||||||||||||| |  ||| |||||| |||| ||| |    
T  8612120 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatg 8612021  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | ||| |||| ||||||||| ||||||||||    
T  8612020 aaccggattagtcgcccacctttggtgggtc 8611990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 14107504 - 14107374
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| || |||| |||||||||||||||| |||| |||   ||||||||||||| |  |||| |||||||||| ||| |    
T  14107504 tccagtggcaaggagctccttccaaagacgtattcggggaataccgggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcatg 14107405  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||||||  ||| |||||||    
T  14107404 agccggattagtcgcccattattagtgggtc 14107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 529 - 582
Target Start/End: Original strand, 1825887 - 1825940
Alignment:
Q  529 atctagagagatcttttgtgatgagtcattggaatgtctatgatataaataatg 582  Q
    ||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||    
T  1825887 atctagagagatcctttgtgatgagtcattgaaatgtcaatgctataaataatg 1825940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 141 - 242
Target Start/End: Original strand, 3601077 - 3601178
Alignment:
Q  141 gtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtggg 240  Q
    |||| ||||||||||||| || ||||  ||  ||||||||||||||||  |||||||||||| ||  ||||||||| |||| ||| ||||| ||||||||    
T  3601077 gtattcggggaataccggtttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtggg 3601176  T
Q  241 tc 242  Q
    ||    
T  3601177 tc 3601178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 205
Target Start/End: Complemental strand, 3588073 - 3587998
Alignment:
Q  130 attccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||| || |||||||| |||||||||||| |||| |||| ||||||||||||||||  |||| ||| ||||||    
T  3588073 attccaaagacgtatccggagaataccgggttcgattcccaaggggaacaacgcttggccagtgcacatacctcta 3587998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 9179882 - 9179755
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||| || |||||||||||||| |||| |||  ||||||||| |||| |  ||  |||| |||||| ||| |    
T  9179882 tccagtggcaaggagctcattccaaggacgtacccagggaataccgggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatg 9179783  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||| | |||| ||| ||||| |||||||    
T  9179782 agctggattagtcgtccacctttggtgg 9179755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 9366569 - 9366460
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| |||||||||||||   |||||||| | |||| |||||  |  ||||| ||||||||||  ||||||||||||||| |||||    
T  9366569 tccagtgacaaggagctccttccaaggatgtacttggggaatatcaggttcgatttttagggggaataacgcttggccagtgcgcatgcctctacgcacg 9366470  T
Q  212 agccgaatta 221  Q
    ||||| ||||    
T  9366469 agccggatta 9366460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 19230703 - 19230576
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||  |||| |||||||| || ||||| ||| |||||||||||||||   ||  ||||||||||| |||||    
T  19230703 tccagtggcaaggagctccttccaaggacgtactcggg-aataccggattcgattttcaa-gggaacaacgcttggtcagtatgcatgcctctacgcacg 19230606  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| |||  || |||||||||||    
T  19230605 agccggattagtcgttcatcattggtgggt 19230576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 24672012 - 24671903
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||||| ||||| || ||||||||||||  ||| ||| |||||||||| |||| |  ||| ||||||||||| ||||     
T  24672012 tccagtggcaaggagctcctttcaaggacgtatctggagaataccgggttctattcccagagggaacaacacttgaccagtgtgcatgcctctacgcaca 24671913  T
Q  212 agccgaatta 221  Q
    ||||| ||||    
T  24671912 agccggatta 24671903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 242
Target Start/End: Complemental strand, 14783494 - 14783436
Alignment:
Q  184 ttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||| ||| ||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  14783494 ttggctagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 14783436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 209
Target Start/End: Complemental strand, 21016897 - 21016800
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    ||||||||||||  |||| ||||| ||| ||| ||||||||||||||||| |||| | || | ||||||| ||| |   ||| |||||||||||||||    
T  21016897 tccagtggcaaggagctccttccagggacgtacccggggaataccgggttcgattcctaaggagaacaacacttagtcagtgtgcatgcctctatgca 21016800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 148; Significance: 1e-77; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 292 - 582
Target Start/End: Original strand, 24899084 - 24899382
Alignment:
Q  292 tcatgggtcaaatatgttaaacatccaagtctaattgaagtggaattgaatgctatgaagaatgagtatgatgtgagctatttaactaccaccttgagga 391  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  24899084 tcatgggtcaaatatgttaaacatcaaagtccaattgaagtggaattgaatgctatgaagaatgagtatgatgtgagctatttaattaccaccttgatga 24899183  T
Q  392 -----caaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataataatccaagtaga-taaagattatgatgagttaa 485  Q
          |||||||||||| |||||||||||||||||| ||    ||||||  |||| |||||||||||   ||| |||| ||||||||||||||||||||    
T  24899184 taaggtaaggtgtttgtgcaagaccaatggaatgtaaagatctaagatagacccaatagaatataatagctcaactagattaaagattatgatgagttaa 24899283  T
Q  486 ttacattat--atattttagaggtgagtcatcatgttctaaaagaatctagagagatcttttgtgatgagtcattggaatgtctatgatataaataatg 582  Q
    ||  |||||  |||||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||| |||||| ||  |||||||||||    
T  24899284 ttgaattatacatattttagaggtgagtcatcatgttttaaaaggatctagagagatcatttgtgacgagtcattgaaatgtcaatactataaataatg 24899382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 421 - 579
Target Start/End: Original strand, 41495957 - 41496112
Alignment:
Q  421 taatgactcgagataggtccaagagaatataataatccaag-tagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgt 519  Q
    ||||||| | ||||||||||||||||||||||||  ||||| || ||||||||||||||||||||||| |||   ||||||||||| | |||||||||||    
T  41495957 taatgacccaagataggtccaagagaatataatag-ccaagctaaataaagattatgatgagttaattgcat---atattttagagattagtcatcatgt 41496052  T
Q  520 tctaaaagaatctagagagatcttttgtgatgagtcattggaatgtctatgatataaata 579  Q
    |||| |||||| |||||| ||| |||||||||||||||| ||||||| ||| ||||||||    
T  41496053 tctagaagaatatagagatatcatttgtgatgagtcattagaatgtcaatgctataaata 41496112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 47078421 - 47078553
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    ||||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||  ||||||||||||||||  |||| |||||||||| |||    
T  47078421 gttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgca 47078520  T
Q  210 cgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||| |||| |||| |||||||||||||||    
T  47078521 cgagccggattagtcgctcaccattggtgggtc 47078553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 5472994 - 5472864
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  ||||||| |||||| |||||||||||||||| |||||||||  ||  || |||||||||||||  ||||||||||||||| |||||    
T  5472994 tccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacg 5472895  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  5472894 agccggattagtcgcccacctttggtgggtc 5472864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 29895752 - 29895879
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  29895752 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 29895851  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||||| |||| ||| |||||||||||||    
T  29895852 agccggattagtcgtccaccattggtgg 29895879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 38165992 - 38166122
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||||| ||||||||||||||| ||||| |||| |||  ||||||||||||||||  ||||||||| ||||| |||||    
T  38165992 tccactggcaaggagctccttccaaggacgtatccggggaatactgggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacg 38166091  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  38166092 agccggattagtcgcccacctttggtgggtc 38166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 292 - 581
Target Start/End: Original strand, 56328958 - 56329246
Alignment:
Q  292 tcatgggtcaaatatgttaaacatccaagtctaattgaagtggaattgaatgctatgaagaatgagtatgatgtgagctatttaactaccaccttgagga 391  Q
    |||||||||||||||||||| |||| ||||| || ||||   |||||||||  |||||| |||||||||  |||||||| ||||| || ||||| |||||    
T  56328958 tcatgggtcaaatatgttaa-catcaaagtccaaatgaaa--gaattgaatt-tatgaacaatgagtatattgtgagctttttaattatcacctcgagga 56329053  T
Q  392 caaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataataatccaagtagataaagattatgatgagttaattacat 491  Q
     |||||||||||| | || |||||||||||||| ||   |||||   |||| | |||| | || ||||||||| ||||||||||||||||||| ||  ||    
T  56329054 taaggtgtttgtgcatgatcaatggaatgtaataacctaagataaacccaatataatagagtagtccaagtaggtaaagattatgatgagttagttgtat 56329153  T
Q  492 tatatattttagagg-tgagtcatcatgttctaaaagaatc--tagagagatcttttgtgatgagtcattggaatgtctatgatataaataat 581  Q
    || ||||||||  || |||| || | ||||||| ||| |||   ||||| || ||||| ||||||||||||||||||| ||| ||||||||||    
T  56329154 tagatattttaatggatgagccaccgtgttctagaaggatccaaagagatattttttgcgatgagtcattggaatgtcaatgctataaataat 56329246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 3159596 - 3159485
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||||||| |||||||||||| || |||||  ||||||||||||||||  ||||||||||||||| |||||||||  |||| |||| |||    
T  3159596 ttccaaggacgtatccggagaataccgggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcac 3159497  T
Q  231 cattggtgggtc 242  Q
    ||||||||||||    
T  3159496 cattggtgggtc 3159485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 36262911 - 36262783
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||| |||| ||||||||| ||| |||| |||||||||||| |||| |||  ||||||||||||||||  |||| |||||||||| |||||    
T  36262911 tccagtggcaagaagctccttccaaggacgtacccggagaataccgggttcgattccca--gggaacaacgcttggccagtgcacatgcctctacgcacg 36262814  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    || || |||| ||||||||| ||||||||||    
T  36262813 agtcggattagtcgcccacctttggtgggtc 36262783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 112 - 232
Target Start/End: Original strand, 1446791 - 1446911
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  1446791 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 1446890  T
Q  212 agccgaattattcgcccacca 232  Q
    ||||| |||| ||| ||||||    
T  1446891 agccggattagtcgtccacca 1446911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 49260792 - 49260681
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||||||||||||||||||| |  ||  ||| |||| ||||||||||||||||  ||||||||||||||| |||||||||| |||| ||| ||||    
T  49260792 ttccaaggatgtatccggggaatactgaattcaattcccaaggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccac 49260693  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  49260692 ctttggtgggtc 49260681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 1940917 - 1940793
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| ||||| |||| |||||| |||| |||  |||||||||||||||   ||||||||||||||| ||||||||    
T  1940917 agtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagc 1940821  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| ||||||||| ||||||||||    
T  1940820 cggattagtcgcccacctttggtgggtc 1940793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 7246773 - 7246662
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||| ||||||||||| ||||| |||| | |  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||||||||    
T  7246773 ttccaaggacgtacccggggaatactgggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 7246674  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  7246673 ctttggtgggtc 7246662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 20532555 - 20532428
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||| ||||||||||||||   || |||| |||||||| ||| ||||||||   |||||||||||||||  ||||||||||||||| ||| |    
T  20532555 tccagtggcaaggtgctcattccaaggccatacccggagaataccgagttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 20532456  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||||| || | ||||||||| |||||||    
T  20532455 agccggataagtcgcccacctttggtgg 20532428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 41163028 - 41162909
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| ||||||||| ||||||||| ||||||| ||| |||||||| |||||||||| ||||||  |||  ||||| |||||||| |    
T  41163028 tccagtgacaaggagctccttccaaggacgtatccgggaaataccgagttcgatttccagagggaacaacacttggccagtgtacatgcttctatgcatg 41162929  T
Q  212 agccgaattattcgcccacc 231  Q
    |||||||||| |||||||||    
T  41162928 agccgaattagtcgcccacc 41162909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 29588701 - 29588831
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  ||||||||||| || ||  ||||| ||||||||||| |||| |||  || ||||| |||||||| ||||||||||||||| |||||    
T  29588701 tccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgcacg 29588800  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |   ||||||||||||||||    
T  29588801 agccggattagttatccaccattggtgggtc 29588831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 41339538 - 41339417
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| |||| |||||||||||| || | |||| ||||||||||||||||  ||| | ||||||||| |||||||     
T  41339538 agtggcaaggagctccttccaaggacgtacccggagaataccgggttcgactcccaaggggaacaacgcttggccagtgtgtatgcctctacgcacgaga 41339439  T
Q  215 cgaattattcgcccaccattgg 236  Q
    || |||| ||||||||||||||    
T  41339438 cggattagtcgcccaccattgg 41339417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 40272463 - 40272347
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| |||||| ||||||||||||||||| |||||| ||||||||  ||||||||||||||||  ||||||||||||||| |||  || || |||  |||    
T  40272463 gctctttccaatgatgtatccggggaatatcgggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcg 40272364  T
Q  226 cccaccattggtgggtc 242  Q
      |||||||||||||||    
T  40272363 ttcaccattggtgggtc 40272347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 2559272 - 2559402
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||| | |||||||||||| || |||||| |   |||||||||||||||  ||||||||||||||| ||||     
T  2559272 tccagtggcaacgagctccttccaaggacgtacctggggaataccggattcgatttctaggaggaacaacgcttggccagtgcgcatgcctctacgcaca 2559371  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  2559372 agccggattactcgtccacctttggtgggtc 2559402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 3507245 - 3507362
Alignment:
Q  121 aagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatt 220  Q
    |||| |||| || |||| |||||||||| ||||| |||||| |||| |||| ||||||||||||||||| |||||| ||||||||  ||||||||| |||    
T  3507245 aagaagctcctttcaagaatgtatccggagaatatcgggttcgattcccaa-gggaacaacgcttggctagtgcgcgtgcctctacacacgagccggatt 3507343  T
Q  221 attcgcccaccattggtgg 239  Q
    | ||| ||||| |||||||    
T  3507344 agtcgtccacctttggtgg 3507362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 55920999 - 55921129
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| | | ||||||||||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| | | |    
T  55920999 tccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatg 55921098  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| |||| ||||||||||    
T  55921099 agccggattaatcgctcacctttggtgggtc 55921129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 30317232 - 30317328
Alignment:
Q  146 cggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||| | |||| ||||  || |||||||||||||||||  || || ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  30317232 cggggaatatcaggttcgattctcagagggaacaacgcttggccagtacgaatgcctctacgcacgagccgaattagtcgcccacctttggtgggtc 30317328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 20128293 - 20128404
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||||||||||||||| ||||| ||||  ||  |||||||| |||||||  |||||||||||| || ||||||||   |||| ||| ||||    
T  20128293 ttccaaggacgtatccggggaatactgggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccac 20128392  T
Q  231 cattggtgggtc 242  Q
    ||||||||||||    
T  20128393 cattggtgggtc 20128404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 24166415 - 24166518
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||  |||||||||| ||||| |||| |||| || ||||||| |||||  ||||||||||||||| |||||    
T  24166415 tccagtggcaaggagctccttccaaggacgtactcggggaatactgggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgcacg 24166514  T
Q  212 agcc 215  Q
    ||||    
T  24166515 agcc 24166518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 38075417 - 38075528
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||| ||| |||||||||||| ||||  ||  || |||||||||||||  ||||||||||||||| ||| ||||||||||| | | ||||    
T  38075417 ttccaaggacgtattcggagaataccgggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattaattgtccac 38075516  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  38075517 ctttggtgggtc 38075528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 43458578 - 43458697
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||| || || |||| |||   |||| ||||||||||  ||||||||||||||| | |||    
T  43458578 tccagtggcaagaagctcattccaaggacgtatttggggaatactggattcgattcccaggaggaagaacgcttggccagtgcgcatgcctctacggacg 43458677  T
Q  212 agccgaattattcgcccacc 231  Q
    ||||| |||| ||| |||||    
T  43458678 agccggattagtcgtccacc 43458697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 43468331 - 43468442
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||| | ||| ||||||||||||||||| |||| |||  ||||||||||||||||  |||| |||  ||||| ||| |||||| |||| ||||||||    
T  43468331 ttccaagaacgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcacatttctctacgcatgagccggattagtcgcccac 43468430  T
Q  231 cattggtgggtc 242  Q
    || |||||||||    
T  43468431 cagtggtgggtc 43468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 6779176 - 6779302
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||||||||| ||| | || |||||||||||| |||| |||  ||||||||| | ||||  ||||||||||||||||||| |    
T  6779176 tccagtggcaaggagcttcttccaaggacgtacctggagaataccgggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatg 6779275  T
Q  212 agccgaattattcgcccaccattggtg 238  Q
    ||||| |||| ||| ||||| ||||||    
T  6779276 agccggattagtcgtccacctttggtg 6779302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 53599025 - 53599134
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||   ||||||||| |||||  ||||||||||||||| ||| |    
T  53599025 tccattggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatg 53599124  T
Q  212 agccgaatta 221  Q
    ||||| ||||    
T  53599125 agccggatta 53599134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 8889001 - 8889117
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||| ||||| ||||||||||||||||||||| |||| | |  ||||||||| |||||   ||||||||| ||||| ||| |||||| |||| |||    
T  8889001 gctccttctaaggacgtatccggggaataccgggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcg 8889100  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||||||||||    
T  8889101 tccacctttggtgggtc 8889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 42722498 - 42722395
Alignment:
Q  138 gatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggt 237  Q
    |||||| |||||||||||||||||||| |||| | ||||||||| |||| |  |||||||| |||||||||| ||| || |||| ||| |||||| ||||    
T  42722498 gatgtacccggggaataccgggtttga-ttcccaggggaacaacacttgaccagtgcgcatacctctatgcatgagtcggattagtcgtccaccaatggt 42722400  T
Q  238 gggtc 242  Q
    |||||    
T  42722399 gggtc 42722395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 27248393 - 27248521
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||||||||||||||||||||| || | |||   |||||||||||||||    ||||||||||||| ||| |    
T  27248393 tccagtggcaacgagctccttccaaggacgtatccggggaataccgggttcgagtcccaggaggaacaacgcttggc--cagcgcatgcctctacgcagg 27248490  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| ||||||||| ||||| ||||    
T  27248491 agccagattagtcgcccacctttggtaggtc 27248521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 231
Target Start/End: Complemental strand, 36145357 - 36145242
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||||||||||||| ||| ||||||||||||||||| |||| |||  || |||||||||||    |||||||||||||||  || |||||    
T  36145357 gtggcaaggagctcattccaaggacgtacccggggaataccgggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagcc 36145258  T
Q  216 gaattattcgcccacc 231  Q
    | |||| ||| |||||    
T  36145257 ggattagtcgtccacc 36145242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Complemental strand, 48015200 - 48015110
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 221  Q
    |||||| || ||| ||| ||||||||||||| |||| |||  ||||||||||||||||  ||||||| ||||||| |||||||||| ||||    
T  48015200 ttccaaagacgtacccgaggaataccgggttcgattcccagtgggaacaacgcttggccagtgcgcaagcctctacgcacgagccggatta 48015110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 14123981 - 14124110
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||| |||| ||||||| | |||   | |||||||| |||| |||| |||  |||||||||  |||||  |||||||||||||||  ||||    
T  14123981 tccaatggcaagaagctccttccaagaacgtacttgaggaataccaggttcgattcccagggggaacaacatttggccagtgcgcatgcctctacacacg 14124080  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| |||| ||||||||||||||    
T  14124081 agccggattagtcgctcaccattggtgggt 14124110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 18102906 - 18102804
Alignment:
Q  456 tccaagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagagagatcttttgtgatgagtc 555  Q
    ||||||||| ||||||||||||||||||| ||   ||| |||| ||||||||||||||||||||| || |||  | |||||||| |  || |||||||||    
T  18102906 tccaagtaggtaaagattatgatgagttagttg--ttagatatattagaggtgagtcatcatgttttagaagggtgtagagagacccgttatgatgagtc 18102809  T
Q  556 attgg 560  Q
    |||||    
T  18102808 attgg 18102804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 20354641 - 20354725
Alignment:
Q  151 aataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 235  Q
    ||||||| ||||||||||||  | ||||||||||||||| ||||||||||||||| ||| ||| || |||| ||| |||| ||||    
T  20354641 aataccgagtttgatttccagggagaacaacgcttggctagtgcgcatgcctctacgcatgagtcggattagtcgtccactattg 20354725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 42722709 - 42722593
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| ||||| |||||||||||  ||| |||   |||||||||||||||  ||||||||||||||| ||| |||||| |||| |||    
T  42722709 gctccttccaaggacgtacccgggaaataccgggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcg 42722610  T
Q  226 cccaccattggtgggtc 242  Q
      |||| || |||||||    
T  42722609 ttcacctttagtgggtc 42722593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 242
Target Start/End: Original strand, 8424582 - 8424649
Alignment:
Q  175 gaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||| |||||  ||||||||||||||||||||||||| ||||| |||| || | ||||||||||    
T  8424582 gaacaacgtttggccagtgcgcatgcctctatgcacgagccaaattaatcgctcatctttggtgggtc 8424649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 40780968 - 40780877
Alignment:
Q  151 aataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||| |||||| ||||  ||| |||||||||||||||   ||||||||||||||| ||| |||||| |||| ||| ||||| ||||||||||    
T  40780968 aatatcgggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 40780877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 52950050 - 52950177
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| | |||||||| |||||| |||| |||  ||||||||||||||||  ||||||||| |||||  || || |    
T  52950050 agtggcaaggagctccttccaaggacgtacctggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaac 52950149  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    |  |||| ||| ||||| ||||||||||    
T  52950150 cagattagtcgtccacctttggtgggtc 52950177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 241
Target Start/End: Complemental strand, 295655 - 295550
Alignment:
Q  135 aaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 234  Q
    ||||| |||||||||||||||| | || |||| ||| ||| ||||||| |||||  ||||||||||||||| |||||| ||  |||| ||| ||||| ||    
T  295655 aaggacgtatccggggaataccagattcgattcccagagg-aacaacgtttggccagtgcgcatgcctctacgcacgaaccagattagtcgtccaccgtt 295557  T
Q  235 ggtgggt 241  Q
    |||||||    
T  295556 ggtgggt 295550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 4736562 - 4736692
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| || |||||||||| ||| |||||||||||||  |||  ||  || ||||||| |||||   || ||||||||||| | ||     
T  4736562 tccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggttcaattctcagtggaaacaacgtttggccaatgtgcatgcctctacgtaca 4736661  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| ||||||||| ||||||||||    
T  4736662 agccgaattagtcgcccaccgttggtgggtc 4736692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 33647689 - 33647786
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacga 212  Q
    |||||||||  |||| || |||||| ||||| ||||||||||||||| ||||||||  | |||||||||||| |  |||| ||| |||||| ||||||    
T  33647689 agtggcaaggagctcctttcaaggacgtatctggggaataccgggttcgatttccagggagaacaacgcttgaccagtgcacattcctctacgcacga 33647786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 20421741 - 20421868
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| || ||| || ||||| ||||||||| || || ||||||||  ||||||||| ||||||  ||||||||||||||| ||| |||    
T  20421741 cagtggcaaggagctcctttcaaagacgtatctggggaatactgg-ttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgag 20421839  T
Q  214 ccgaattattcgcccaccattggtgggtc 242  Q
    ||  |||| ||| ||| ||||| ||||||    
T  20421840 ccagattaatcgtccatcattgatgggtc 20421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 38168227 - 38168330
Alignment:
Q  117 tggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 216  Q
    |||||||  |||| ||||||||| ||| |||||||||||| |||| |||| | ||  |||||||||||||||  |||| |||||||||| ||| ||||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggttcgattcctaagaggaacaacgcttggccagtgc-catgcctctacgcatgagccg 38168325  T
Q  217 aatta 221  Q
     ||||    
T  38168326 gatta 38168330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 242
Target Start/End: Original strand, 50485990 - 50486038
Alignment:
Q  194 cgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||||| |||||||||| |||| |||||||||||| |||||||    
T  50485990 cgcatgcctctacgcacgagccggattagtcgcccaccattagtgggtc 50486038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 3574592 - 3574473
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |  |||||||||| |||  ||| |||  | ||||||| ||||||  ||||||||||||||| |||||    
T  3574592 tccagtggcaaggagctccttccaaggacgtacctagggaataccgagttcaattcccagggagaacaacacttggccagtgcgcatgcctctacgcacg 3574493  T
Q  212 agccgaattattcgcccacc 231  Q
    || || |||| |||| ||||    
T  3574492 agtcggattagtcgctcacc 3574473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 18531487 - 18531614
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||| | |||||||||||| | ||||| |||||||||    ||||||  |||  ||||||||| |||||   ||||||||||||| |||||||| |    
T  18531487 agtggcaaaaagctcattccaagaacgtatctggggaatactatatttgatccccagggggaacaacacttggtcagtgcgcatgcctccatgcacgaac 18531586  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    |  |||||||| ||||| || |||||||    
T  18531587 cagattattcgtccaccttttgtgggtc 18531614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 10541018 - 10541084
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    |||||| |||||| ||||||||  || |||||||||||||  ||| ||||||||||| |||||||||    
T  10541018 ggaatatcgggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgcacgagcc 10541084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 17080069 - 17080127
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 231  Q
    ||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||| ||||    
T  17080069 gggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacc 17080127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 6032786 - 6032737
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtt 161  Q
    ||||||||||||  |||| ||||||||| ||| |||||||||||||||||    
T  6032786 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 6032737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 13436811 - 13436852
Alignment:
Q  146 cggggaataccgggtttgatttccaaagggaacaacgcttgg 187  Q
    |||||||||||||||| |||| ||| ||||||||||||||||    
T  13436811 cggggaataccgggttcgattcccagagggaacaacgcttgg 13436852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 2e-33; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 466 - 587
Target Start/End: Original strand, 5411360 - 5411481
Alignment:
Q  466 taaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagagagatcttttgtgatgagtcattggaatgt 565  Q
    ||||||||||||||||||  || ||||| |||||||||||| |||||||||||||||| ||| ||||||||||||| ||| ||||||||||||| ||||     
T  5411360 taaagattatgatgagttggttgcattagatattttagaggcgagtcatcatgttctagaaggatctagagagatcctttatgatgagtcattgtaatgc 5411459  T
Q  566 ctatgatataaataatgtagtg 587  Q
    | ||||||||||||||||||||    
T  5411460 caatgatataaataatgtagtg 5411481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 25294920 - 25295049
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||||||||  |   || |||||| ||||||  ||||||||||||||||||| |    
T  25294920 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatg 25295019  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| ||| |||||||||||||||    
T  25295020 agccggattagtcgtccaccattggtgggt 25295049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 13893886 - 13894013
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| || |||||||||||||||||| ||||||||  |||||||||||||||    ||||||||||||||  ||||    
T  13893886 tccagtggcaaggagctccttccaaggacgtgtccggggaataccgggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacg 13893985  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||||| |||| ||||||||| |||||||    
T  13893986 agccggattagtcgcccacctttggtgg 13894013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 30767394 - 30767264
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || ||||||||||||| | |||||||| |||||| ||||||||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  30767394 tccagtggcaaggagttccttccaaggatgtacctggggaatatcgggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacg 30767295  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  30767294 agccggattagtcgcccacctttggtgggtc 30767264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 378 - 535
Target Start/End: Complemental strand, 38086245 - 38086088
Alignment:
Q  378 taccaccttgaggacaaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataataatccaagtagataaagattatga 477  Q
    |||||||||||||||| || ||||||| | || ||| ||||||||||||| | ||||||||||||    ||| |||| || |||||  ||||||||||||    
T  38086245 taccaccttgaggacagggagtttgtgcaggaacaaaggaatgtaatgacccaagataggtccaatgtgatagaatagtcaaagtatgtaaagattatga 38086146  T
Q  478 tgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctaga 535  Q
    ||||||| || ||||| |||||||| ||||| |||||||| |||||  ||||||||||    
T  38086145 tgagttagttgcattaaatattttaaaggtgggtcatcatattctagtagaatctaga 38086088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 47219118 - 47219234
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| |||||||||||||||| |||| |||| |||| || |||||||||||||| ||||||||||||||| ||| |||||| |||| |||    
T  47219118 gctctttccaaggacgtatccggggaataccaggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcg 47219217  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||| ||||||    
T  47219218 tccacctttgatgggtc 47219234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 10855344 - 10855459
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||||||||||   ||| ||||||||||||||||||||  ||||||||||||||||  || |||||||||||| |||||    
T  10855344 tccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtttgatttccagggggaacaacgcttggccagtacgcatgcctctacgcacg 10855443  T
Q  212 agccgaattattcgcc 227  Q
    | |||||||| |||||    
T  10855444 aaccgaattagtcgcc 10855459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 47749232 - 47749122
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||||| |||||||||||||| |||| || | ||||||||| ||||||  ||||||||||||||| ||||||||||||||| ||||||||    
T  47749232 ttccaaggacgtatccagggaataccgggttcgatt-cctaggggaacaactcttggccagtgcgcatgcctctacgcacgagccgaattagtcgcccac 47749134  T
Q  231 cattggtgggtc 242  Q
    | ||||| ||||    
T  47749133 ctttggtaggtc 47749122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 15320146 - 15320276
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||||| |   ||||||| | |||||  ||| ||||||||||| |||||    
T  15320146 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatttcgaggaggaacaatgattggccagtgtgcatgcctctacgcacg 15320245  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  15320246 agccggattagtcgcccacctttggtgggtc 15320276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 29135873 - 29136002
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||||||||| |||||||||||||||||| || |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  29135873 tccagtggcaaggagcttcttccaaggacgtatccggggaataccggattcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 29135972  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| ||  |||||||||||||||    
T  29135973 agccggattagtcttccaccattggtgggt 29136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 15795626 - 15795511
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| ||||||||||||| ||| |||| |||  |||||||||||||||   ||||||||||||||| |||||||| |||||| |||    
T  15795626 gctccttccaaggacgtacccggggaataccgagttcgattcccag-gggaacaacgcttggtcagtgcgcatgcctctacgcacgagctgaattagtcg 15795528  T
Q  226 cccaccattggtgggtc 242  Q
    ||||||| |||||||||    
T  15795527 cccaccaatggtgggtc 15795511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 148 - 242
Target Start/End: Complemental strand, 3507644 - 3507550
Alignment:
Q  148 gggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||||| | | |||||||||| ||||||  ||||||||||||||| |||||||||| |||| |||| |||| ||||||||||    
T  3507644 gggaataccgggtttgattcctagagggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtc 3507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 26207948 - 26207818
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||||||| ||||||||||||||||| |||| |||  |||||||||||||| |  ||| ||||||||||| ||| |    
T  26207948 tccagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccacggggaacaacgcttgtccagtgtgcatgcctctacgcatg 26207849  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| |||  ||| |||||||    
T  26207848 agccggattagtcggccattattagtgggtc 26207818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 29127879 - 29128009
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || ||||||||| ||||| |||||||| |||||| ||||||||  | ||||||| |||||   ||||||||||||||| ||| |    
T  29127879 tccagtggcaaggagatccttccaaggacgtatctggggaatatcgggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatg 29127978  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  29127979 agccggattagtcgcccacctttggtgggtc 29128009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 29762302 - 29762172
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||||||||||| ||||||||| |||||  ||||  ||  || |||||| ||||||  ||||||||||||||||||| |    
T  29762302 tccagtggcaaggagctccttccaaggatgtattcggggaatatcgggtccgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatg 29762203  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| | |||| ||| ||||||||||||||||    
T  29762202 agctggattagtcgtccaccattggtgggtc 29762172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 45877414 - 45877544
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  || | ||||||||| ||||||||||||||||||||| ||||||||  || |||||| ||||||  |||| |||||||||| ||| |    
T  45877414 tccagtggcaaggagccccttccaaggacgtatccggggaataccgggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatg 45877513  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||||||| ||||||    
T  45877514 agccggattagtcgttcaccattgatgggtc 45877544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 51683101 - 51682971
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||| ||  |||| |||||| || |||||||||||||||| |||| |||| |||  |||||||||||||| |  ||||||||||||||   ||||    
T  51683101 tccagtggcgaggagctccttccaaagacgtatccggggaataccaggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctccacacg 51683002  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||||||||| |||||||||    
T  51683001 agccggattagtcgcccaccaatggtgggtc 51682971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 112 - 232
Target Start/End: Complemental strand, 42412921 - 42412801
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||||| ||||||||||||||||||||| |||| ||   ||||||||||||||||  |||| |||||||||| ||| |    
T  42412921 tccaatggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatg 42412822  T
Q  212 agccgaattattcgcccacca 232  Q
    ||||| |||| |||| |||||    
T  42412821 agccggattagtcgctcacca 42412801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 49198330 - 49198438
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    |||||||||  |||||||||||||||||||| |||| | |  ||||||||| ||||||  ||||||||||||||| ||| |||||| |||| ||| ||||    
T  49198330 ttccaaggacatatccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccac 49198429  T
Q  231 cattggtgg 239  Q
    |||||||||    
T  49198430 cattggtgg 49198438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 49543482 - 49543609
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| |||||| ||||||| |||||| ||||  ||  |||||||||| ||||   ||| ||||||||||| ||||||||    
T  49543482 agtggcaaggagctccttccaaggacgtatcccgggaatatcgggttcgattctcatggggaacaacgtttggtcagtgtgcatgcctctacgcacgagc 49543581  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    ||||||| ||||||||| || |||||||    
T  49543582 cgaattagtcgcccacctttagtgggtc 49543609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 147 - 239
Target Start/End: Original strand, 8164548 - 8164640
Alignment:
Q  147 ggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgg 239  Q
    |||||||||||||||  ||||| || ||||||||||||||||  |||||||||||| || ||||||| || |||| ||||||||| |||||||    
T  8164548 ggggaataccgggttcaatttctaaggggaacaacgcttggccagtgcgcatgcctttacgcacgagtcggattagtcgcccacctttggtgg 8164640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 45402495 - 45402368
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||| ||||||||   ||||||| |||||||||| |||||| |||| | | |||||||||| || ||| |||||||||||||||| ||| |    
T  45402495 tccagtggcaagaagctcattc---ggatgtacccggggaatatcgggttcgattcctagagggaacaacactcggcctgtgcgcatgcctctacgcatg 45402399  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||| || |||||||    
T  45402398 agccggattagtcgttcacctttagtgggtc 45402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 47471806 - 47471921
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| |  |||||||||||||| |||| |||  |||||||| |||||||| |||||||||| |||| ||| ||||||||||| |||    
T  47471806 gctccttccaaggacgtacctagggaataccgggttcgattcccag-gggaacaatgcttggctagtgcgcatgcttctacgcatgagccgaattagtcg 47471904  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||||||||||    
T  47471905 tccacctttggtgggtc 47471921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 55069804 - 55069696
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 233  Q
    |||||| |||| | |||||||| |||||||||| | | ||||||||||| |||||  |||| |||||||||| |||||||||| |||| |||| |||| |    
T  55069804 caaggacgtattcagggaatactgggtttgattcctatagggaacaacgtttggccagtgcacatgcctctacgcacgagccggattaatcgctcacctt 55069705  T
Q  234 tggtgggtc 242  Q
    |||||||||    
T  55069704 tggtgggtc 55069696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 7328823 - 7328933
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||| ||||| ||||||||||| |||| |||  ||||||||| ||||||  |||||||||||| || ||| |||||| |||| ||||||||    
T  7328823 ttccaaggacgtacccgggaaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccac 7328921  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  7328922 ctttggtgggtc 7328933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 241
Target Start/End: Original strand, 7650185 - 7650316
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    ||||||||||||||  | || || ||||||||||    |||||||||||||| ||||||||  ||||||||| ||||||  || || ||| ||||| |||    
T  7650185 gttccagtggcaaggagttcctttcaaggatgtacttagggaataccgggttcgatttccagggggaacaacacttggccagtacgaatgtctctacgca 7650284  T
Q  210 cgagccgaattattcgcccaccattggtgggt 241  Q
    ||||||| |||| ||||||||| |||||||||    
T  7650285 cgagccggattagtcgcccacctttggtgggt 7650316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 300 - 427
Target Start/End: Complemental strand, 38086470 - 38086345
Alignment:
Q  300 caaatatgttaaacatccaagtctaattgaagtggaattgaatgctatgaagaatgagtatgatgtgagctatttaactaccaccttgaggacaaggtgt 399  Q
    ||||||| || |||||| |||||||| || |||||||||||||  | |||||||||||||| |||||| || ||||| |||||| || ||||||  ||||    
T  38086470 caaatatatttaacatcaaagtctaaatggagtggaattgaatt-tgtgaagaatgagtattatgtgaact-tttaattaccacattaaggacattgtgt 38086373  T
Q  400 ttgtgtaagaccaatggaatgtaatgac 427  Q
    ||||| || ||||||| |||||||||||    
T  38086372 ttgtgcaacaccaatgaaatgtaatgac 38086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 6462375 - 6462481
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||||| ||||||||||||||| ||||  ||  | ||||||||||||||  ||||||||||||||| ||| ||||    
T  6462375 agtggcaaggagctccttccaaggacgtatctggggaataccgggttcgattcacagggagaacaacgcttggccagtgcgcatgcctctacgcatgagc 6462474  T
Q  215 cgaatta 221  Q
    || ||||    
T  6462475 cggatta 6462481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 28572358 - 28572228
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||| | | | ||||||||||| ||||| |||| |||  || |||||||||||||  ||  ||||||||||| |||||    
T  28572358 tccagtggcaaggagctcctttcaagaacgcacccggggaatactgggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacg 28572259  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  28572258 agccggattagtcgcccacctttggtgggtc 28572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 35315916 - 35316046
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||| |||| ||||| |||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  35315916 tccagtggcaaagagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 35316015  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| | |||| ||||||||  ||||||||||    
T  35316016 agctggattagtcgcccacttttggtgggtc 35316046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 51060428 - 51060298
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| |||||||||| ||||||||||||| |||||| ||||  ||  ||||||||| |||||   ||||||||||||||| ||| |    
T  51060428 tccagtggcaaatagctccttccaaggatctatccggggaatatcgggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatg 51060329  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | | | |||| ||| ||||||||||||||||    
T  51060328 aactggattagtcgtccaccattggtgggtc 51060298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 54261186 - 54261316
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| | ||||||||||||||| |||| | |   |||||||||||||||  ||||||||||||||| ||| |    
T  54261186 tccagtggcaaggagctccttccaaggacgtacctggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 54261285  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||| || |||||||    
T  54261286 agccggattagtcgttcacctttagtgggtc 54261316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 10040517 - 10040645
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||| ||||| ||| |||||||||| |||||| ||||  ||  ||||||||||||||||  ||||||||||||||| |||||    
T  10040517 tccagtggcaaggagctccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccagtgcgcatgcctctacgcacg 10040615  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| | |  ||| ||||| |||||||||    
T  10040616 agccggaatggtcgtccacctttggtgggt 10040645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 11687256 - 11687163
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||||||||| |||| ||||||||| ||| | || |||||||||||||||||  ||  |||||||| |||||||  |||||||||||||||    
T  11687256 tccagtggcaagaagctccttccaaggacgtacctggagaataccgggtttgattctcagggggaacaatgcttggccagtgcgcatgcctcta 11687163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 48341980 - 48342073
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||||||||  |||| ||||||||| ||| | |||||||||||||||  ||| | |  ||||||||||||||||| |||||||||||||||    
T  48341980 tccagtggcaaggagctccttccaaggacgtacctggggaataccgggttctattcctagggggaacaacgcttggctagtgcgcatgcctcta 48342073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 52364933 - 52364845
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||| ||||||||| ||| ||||||||||||| ||| |||| ||| | ||||||||||||| |  ||||||||||||||| ||||||||    
T  52364933 gctccttccaaggacgtacccggggaataccgagttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgcacgagc 52364845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 41630659 - 41630529
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| ||||| ||| ||| ||||  |||||||||||  ||| |||| |||||||||||||| |  |||||||||||||||  || |    
T  41630659 tccagtgacaaggagctccttccatggacgtaaccggaaaataccgggttcaattcccaaggggaacaacgcttgcccagtgcgcatgcctctacacatg 41630560  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||| ||||    
T  41630559 agccggattagtcgcccacctttggttggtc 41630529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 50405686 - 50405620
Alignment:
Q  176 aacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||| |  ||||||||||||||| ||||||| || |||| ||||||||||||||||||||    
T  50405686 aacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtc 50405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 198
Target Start/End: Complemental strand, 7613071 - 7612987
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcat 198  Q
    ||||||||||  |||| ||||||||| |||   ||||||||||||||| |||| |||  ||||||||||||||||| ||||||||    
T  7613071 cagtggcaaggagctccttccaaggacgtacttggggaataccgggttcgattcccagggggaacaacgcttggctagtgcgcat 7612987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 43330800 - 43330749
Alignment:
Q  191 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  43330800 gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 43330749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 242
Target Start/End: Complemental strand, 3136836 - 3136711
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||| |||| || |||||| ||| |||||||||||||| || ||||| | | ||||||||| |||||   ||||||||||||||| ||| ||| |    
T  3136836 gtggcaagaagctcctttcaaggacgtacccggggaataccggattcgattttc-aggggaacaacacttgggcagtgcgcatgcctctacgcatgagtc 3136738  T
Q  216 gaattattcgcccaccattggtgggtc 242  Q
    | |||| ||| ||||| ||||| ||||    
T  3136737 ggattagtcgtccacctttggttggtc 3136711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 39849032 - 39849149
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||  | ||||||  |||||| |||| ||| ||| |||||||||||||  ||| ||||||||||| ||| |    
T  39849032 tccagtggcaaggagctccttccaaggacgtactcagggaatttcgggttcgattcccagagg-aacaacgcttggccagtgtgcatgcctctacgcatg 39849130  T
Q  212 agccgaattattcgcccac 230  Q
    ||||| |||| ||||||||    
T  39849131 agccggattagtcgcccac 39849149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 7310813 - 7310720
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| |||||||||| |||| |||| || | ||||||||||    
T  7310813 ggaataccgggttcgattcccagtgggaacaacacttgcccggtgtgcatgcctctacgcacgagccggattagtcgctcatctttggtgggtc 7310720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 26362077 - 26361984
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||| | ||||||||| |||| |||||||||| ||||   ||| ||||||||||| |||||||||| |||| |||| |||| ||| ||||||    
T  26362077 ggaatatcaggtttgattcccaaggggaacaacgtttggtcagtgtgcatgcctctacgcacgagccggattagtcgcacacctttgatgggtc 26361984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 31072838 - 31072963
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| || |||||| ||| |||| ||||||| |||| ||||||||  |||||||||||||||   |||| |||||||||| |||||    
T  31072838 tccaatggcaaggagctcctttcaaggacgtacccggagaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacg 31072937  T
Q  212 agccgaattattcgcccaccattggt 237  Q
    | ||  |||| ||| ||||| |||||    
T  31072938 acccagattaatcgtccacctttggt 31072963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 45450591 - 45450501
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||||||||| |||||||||||| | |||||||  |||||| ||||||||||||| | |||||||| ||||| |  |||||||||||||||    
T  45450591 tccagtggcaaga-gctcattccaag-acgtatccgtagaatactgggtttgatttcc-aggggaacaatgcttgaccagtgcgcatgcctcta 45450501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Complemental strand, 13167561 - 13167497
Alignment:
Q  141 gtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||| |||||||| |||||| |||| ||||| |||||||||||||||  |||| ||||||||||    
T  13167561 gtatctggggaatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 13167497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 33251636 - 33251740
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||||  ||||||||||||||| |||| ||   |||||||||| |||||  ||| ||||||||||| ||| |||||| |||| |||    
T  33251636 gctccttccaaggacgtattaggggaataccgggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcg 33251735  T
Q  226 cccac 230  Q
     ||||    
T  33251736 tccac 33251740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 30045816 - 30045911
Alignment:
Q  147 ggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||| |||| | |  ||||||||||||||||  ||||||||| ||||| ||||||| |  |||| ||| ||||| ||| ||||||    
T  30045816 ggggaataccgggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtc 30045911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 33560822 - 33560873
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgat 165  Q
    ||||||||||  |||| ||||||||||||| | |||||||||||||||||||    
T  33560822 cagtggcaaggagctccttccaaggatgtacctggggaataccgggtttgat 33560873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 35923756 - 35923661
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 221  Q
    |||||||||||||| ||| | || ||||||| |||| ||||   |  |||||||||| |||||  ||||||||||||||| ||||||| |||||||    
T  35923756 gctcattccaaggacgtacctggagaataccaggttcgattcatagggggaacaacgtttggccagtgcgcatgcctctaagcacgagtcgaatta 35923661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 37092652 - 37092565
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatg 199  Q
    ||||||||||||  |||  ||||||||| ||| ||| |||||| ||| || ||||||||| |||||||||| |||||  |||||||||    
T  37092652 tccagtggcaaggagcttcttccaaggacgtacccgtggaatatcggattagatttccaaggggaacaacgtttggccagtgcgcatg 37092565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 49021271 - 49021220
Alignment:
Q  191 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  49021271 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 49021220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 176 - 242
Target Start/End: Complemental strand, 2029350 - 2029284
Alignment:
Q  176 aacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||||| | || |||||||||||| ||| |||| | |||| ||||||||||||| ||||||    
T  2029350 aacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtc 2029284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 26043812 - 26043898
Alignment:
Q  152 ataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtg 238  Q
    |||||||||| |||| |||  | ||||||| ||||||  ||||||||||||||| ||| |||||| |||| |||| |||| ||||||    
T  26043812 ataccgggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtg 26043898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 32873695 - 32873571
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||| || ||||||||| |||| |||| | |  | |||||||||||| |  |||| |||||||||| | | |    
T  32873695 tccagtggcaaggagctcattccaaggacgta-cccgggaataccaggttcgattcctagggagaacaacgcttgaccagtgcacatgcctctacgtatg 32873597  T
Q  212 agccgaattattcgcccaccattggt 237  Q
    ||||  |||| ||||||||| |||||    
T  32873596 agccagattagtcgcccacctttggt 32873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 49082784 - 49082877
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    |||||||||| |  |||| ||| ||||| ||||||||||||||||| ||| |||| |||  | ||||||||||| ||  |||||||||| ||||    
T  49082784 tccagtggcagggagctccttctaaggacgtatccggggaataccgagttcgattcccagggagaacaacgcttagccagtgcgcatgcatcta 49082877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 1e-31; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 48804646 - 48804776
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||| ||||||||| ||||||  ||||||||||||||| ||| |    
T  48804646 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatg 48804745  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||||||||||||||    
T  48804746 agccggattagtcgtccaccattggtgggtc 48804776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 292 - 454
Target Start/End: Complemental strand, 22621070 - 22620909
Alignment:
Q  292 tcatgggtcaaatatgttaaacatccaagtctaattgaagtggaattgaatgctatgaagaatgagtatgatgtgagctatttaactaccaccttgagga 391  Q
    ||||||||||||| || |||||||  |||||||| |  |||||||||||| | || ||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  22621070 tcatgggtcaaatgtgctaaacattaaagtctaaatagagtggaattgaa-gttaggaagaatgactataatgtgagctttttaattaccaccttgagga 22620972  T
Q  392 caaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaagagaatataata 454  Q
    |||||||||| || |||| || ||||||||||||| |  |||||||||||  |||||||||||    
T  22620971 caaggtgtttctgcaagaacagtggaatgtaatgaattaagataggtccattagaatataata 22620909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 34659189 - 34659315
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||| ||||||| ||||||||||||||||| ||||  ||| |||||||||||||| |  ||||||||||||||| |||||    
T  34659189 tccagtggcaaggagctccttccagggatgtacccggggaataccgggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacg 34659288  T
Q  212 agccgaattattcgcccaccattggtg 238  Q
    ||||| |||| ||||||||||||||||    
T  34659289 agccggattagtcgcccaccattggtg 34659315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 10048022 - 10047892
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||| ||||||| ||| |    
T  10048022 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatg 10047923  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| |||||| ||| ||||||||||||||||    
T  10047922 agcagaattagtcgtccaccattggtgggtc 10047892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 38578994 - 38578883
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||| |||||||||| |||||| |||| |||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||||||||    
T  38578994 ttccaaggacgtacccggggaatatcgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccac 38578895  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  38578894 ctttggtgggtc 38578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 21530711 - 21530841
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| | ||||||||| |||||||||| |||  ||||||||| |||||   |||| |||||||||| |||||    
T  21530711 tccagtggcaaggagctccttccaaggacgtacctggggaatactgggtttgattcccagggggaacaacacttggtcagtgcacatgcctctacgcacg 21530810  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| |||| |||| ||||||||||    
T  21530811 agccgaattaatcgctcacctttggtgggtc 21530841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 47341839 - 47341969
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||| ||||||||||||| ||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  47341839 tccagtggcaaggagctcattccaaggacgtacccggggaataccgagttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 47341938  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| | |||  |||  |||||||||||||||    
T  47341939 agcaggattggtcgttcaccattggtgggtc 47341969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 4195348 - 4195219
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| | ||||||| ||||||||||||||||| ||| ||||||||   ||||||||  |||||| ||||||||||||||| ||| |    
T  4195348 tccagtggcaaggagctcctgccaaggacgtatccggggaataccgagttcgatttccaggaggaacaacatttggctagtgcgcatgcctctacgcatg 4195249  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| ||||  || |||||||||||||||    
T  4195248 agccggattagccgtccaccattggtgggt 4195219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 17748509 - 17748398
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||| |||||||||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| | |||||||| |||| ||| ||||    
T  17748509 ttccaaggacgtattcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccac 17748410  T
Q  231 cattggtgggtc 242  Q
    | ||| ||||||    
T  17748409 ctttgttgggtc 17748398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 5069961 - 5069831
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||| ||||| ||| ||||| ||||||||||| ||||||||   |||||||||||| ||| ||| ||||||||||| ||||     
T  5069961 tccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggttcgatttccaggaggaacaacgcttagctagtgtgcatgcctctacgcaca 5069862  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  5069861 agccggattagtcgcccacctttggtgggtc 5069831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 42210408 - 42210278
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||| |||||||||| || |||| |||  |  ||||||| |||||  ||||||||||||||| |||||    
T  42210408 tccagtggcaaggagctctttccaaggacgtatccgaggaataccggcttcgattcccagtgaaaacaacgtttggccagtgcgcatgcctctacgcacg 42210309  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| || |||||| ||||||||||    
T  42210308 agccggattaatcacccaccgttggtgggtc 42210278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 1797423 - 1797527
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||| ||||||||||||| |||| |||  || |||||||||||||  ||||||||| ||||| |||||    
T  1797423 tccagtggcaaggagctccttccaaggacgtatccgaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgcacg 1797522  T
Q  212 agccg 216  Q
    |||||    
T  1797523 agccg 1797527  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 13095825 - 13095951
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| || |||||| ||| |||||||||||||||||  ||| |||  ||||||||| ||||||  ||||||||||||||| ||| |||||    
T  13095825 gtggcaaggagctcctttcaaggacgtacccggggaataccgggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagcc 13095924  T
Q  216 gaattattcgcccaccattggtgggtc 242  Q
    | |||| |||| |||| ||||||||||    
T  13095925 ggattagtcgctcacctttggtgggtc 13095951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 22993513 - 22993383
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |||||||||| |||||| |||| | |   |||||||||||||||  ||| ||||||||||| |||||    
T  22993513 tccagtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacg 22993414  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | ||| |||| |||| |||| ||||||||||    
T  22993413 aaccggattagtcgctcacctttggtgggtc 22993383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 43346925 - 43346795
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| || ||||| |||||||||||||||  |||  ||| ||||||||| ||||||  ||||||||||||||| | |||    
T  43346925 tccagtggcaaggagctccttccaaagacgtatctggggaataccgggttcaattctcaaggggaacaacacttggccggtgcgcatgcctctacgtacg 43346826  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| || | ||||||||||    
T  43346825 agccggattagtcgctcatctttggtgggtc 43346795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 1605918 - 1606031
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| |||| ||||||| |||| ||||||||  ||||||||||||||||  |||| |||||||||| ||  |||||| |||| |||    
T  1605918 gctccttccaaggacgtacccggagaatacctggttcgatttccagggggaacaacgcttggccagtgcacatgcctctaggcttgagccggattagtcg 1606017  T
Q  226 cccaccattggtgg 239  Q
    |||||| |||||||    
T  1606018 cccacctttggtgg 1606031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 112 - 205
Target Start/End: Original strand, 18785632 - 18785725
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||||||||| |||| ||||||||| ||| ||||||||||||||||| |||| | |  ||||||||| ||||||  |||||||||||||||    
T  18785632 tccagtggcaagaagctccttccaaggacgtacccggggaataccgggttcgattcctagggggaacaacacttggccagtgcgcatgcctcta 18785725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 4228897 - 4228770
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||| ||||||  |||| ||||||||| ||||||| |||||||| |||| ||||||||   ||||||||| |||||  |||| |||||| ||| ||| |    
T  4228897 tccagcggcaaggagctccttccaaggacgtatccgaggaataccaggttcgatttcca---ggaacaacgtttggccagtgcacatgcccctacgcatg 4228801  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||||||| ||||||    
T  4228800 agccggattagtcgcccaccattgatgggtc 4228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 21190912 - 21190796
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| |||||||||  |||||||||||||||||||| |||| | |   ||| |||||||||||| ||||||||||||||| ||||||| |  |||| |||    
T  21190912 gctccttccaaggacttatccggggaataccgggttcgattcctaggaggagcaacgcttggctagtgcgcatgcctctacgcacgagtcagattagtcg 21190813  T
Q  226 cccaccattggtgggtc 242  Q
    |||| || |||||||||    
T  21190812 cccatcaatggtgggtc 21190796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 416 - 540
Target Start/End: Complemental strand, 37486294 - 37486170
Alignment:
Q  416 gaatgtaatgactcgagataggtccaagagaatataataatccaagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatc 515  Q
    ||||||||||| || ||||| |||||||| |||| ||||| |||||||| ||| || | |||||||||| ||  |||| ||| |||||||| ||| ||||    
T  37486294 gaatgtaatgaatcaagataagtccaagaaaataaaataacccaagtagctaaggaatgtgatgagttagttgtattagataatttagaggcgagccatc 37486195  T
Q  516 atgttctaaaagaatctagagagat 540  Q
    || |||| |||| ||||||||||||    
T  37486194 atattctgaaaggatctagagagat 37486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 16802086 - 16802216
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||| |||||||||||||| || ||||   |   ||||||||| |||||  ||||| ||||||||| |||||    
T  16802086 tccagtggcaatgagctccttccaaggacgtacccggggaataccggattcgattcttaggaggaacaacgattggccagtgcgtatgcctctacgcacg 16802185  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| |||||||||||||||    
T  16802186 agccggattagtcgctcaccattggtgggtc 16802216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 214
Target Start/End: Original strand, 43925475 - 43925577
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  43925475 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatg 43925574  T
Q  212 agc 214  Q
    |||    
T  43925575 agc 43925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 36619378 - 36619270
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 233  Q
    |||||| ||||  ||||||||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| ||| |||||| |||| ||| |||||||    
T  36619378 caaggacgtatttggggaataccgggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccat 36619279  T
Q  234 tggtgggtc 242  Q
    |||||||||    
T  36619278 tggtgggtc 36619270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 14535273 - 14535384
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||  | ||||||||||||||| |||| ||  | ||||||| ||||||  ||| ||||||||||| |||||||| | |||| ||||||||    
T  14535273 ttccaaggacgtactccgggaataccgggtttcattttcagggagaacaacacttggccagtgtgcatgcctctacgcacgagctggattagtcgcccac 14535372  T
Q  231 cattggtgggtc 242  Q
    ||||| ||||||    
T  14535373 cattgatgggtc 14535384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 43862104 - 43862009
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaatta 221  Q
    |||| |||||| || ||||| ||||||||||||||| |||| |||  |||||||||| |||||  ||||||||||||||| ||| |||||| ||||    
T  43862104 gctctttccaaagacgtatctggggaataccgggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggatta 43862009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 27028246 - 27028372
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||||||||||| | ||| | ||| |||||| |||| ||||||||  ||||||||| ||||||  |||||||||||||||  || ||||     
T  27028246 gtggcaaggagctcattccaagaacgtacctgggaaataccaggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagct 27028345  T
Q  216 gaattattcgcccaccattggtgggtc 242  Q
    | |||| |||| |||| ||||||||||    
T  27028346 ggattagtcgctcacctttggtgggtc 27028372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 221
Target Start/End: Original strand, 39420804 - 39420909
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| || |||||| ||| |||||||||||||| || || | |||||||||||||||||||||  |||||| |||||||| ||| ||||    
T  39420804 agtggcaaggagctcctttcaaggaggtacccggggaataccgg-ttcgaatcccaaagggaacaacgcttggccagtgcgcgtgcctctacgcatgagc 39420902  T
Q  215 cgaatta 221  Q
    || ||||    
T  39420903 cggatta 39420909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 42032059 - 42032189
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||| |||||| |||| ||||||||| ||| |||||||||||| |||| |||| |||  |||||||||| |||||  |||| ||| | |||| ||| |    
T  42032059 tccagtagcaagaagctccttccaaggacgtacccggggaatacctggttcgattcccacggggaacaacgtttggccagtgcacatacatctacgcatg 42032158  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| | | ||||| ||| ||||||    
T  42032159 agccgaattagttgtccacctttgatgggtc 42032189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 19914848 - 19914720
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |   ||||||| ||||| |||| ||||||| |||||||||||||   |||||||||||||| ||| |    
T  19914848 tccagtggcaaggagctccttccaaggacgtacctaaggaatactgggttcgattcccaaagg-aacaacgcttggccaatgcgcatgcctctacgcatg 19914750  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||  |||| ||||||||| ||| |||||    
T  19914749 agccagattaatcgcccacctttgatgggt 19914720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 41945482 - 41945562
Alignment:
Q  157 gggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtg 238  Q
    ||||||||||| ||| ||||| ||||||||||  ||||||||||||||| |||||||||| |||| ||| ||||| ||||||    
T  41945482 gggtttgattttcaa-gggaataacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtg 41945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 22973944 - 22974060
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| |||  |||||||||||||||| ||||  ||  ||||||||||||||||  ||| |||||| |||| ||| |||||  |||| |||    
T  22973944 gctccttccaaggacgtactcggggaataccgggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcg 22974043  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||||||||||    
T  22974044 tccacctttggtgggtc 22974060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 37514898 - 37515014
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| |||||||||  || ||||||||||| ||||| ||||| ||  |||||||||| ||||   ||||||||| ||||| |||||||||| |||| |||    
T  37514898 gctccttccaaggacatacccggggaatactgggttcgattttcagtgggaacaacgtttggtcagtgcgcatgtctctacgcacgagccggattaatcg 37514997  T
Q  226 cccaccattggtgggtc 242  Q
      ||||||| |||||||    
T  37514998 ttcaccattagtgggtc 37515014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 26423433 - 26423330
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||||  ||| ||||||||| ||| ||  ||||||||||||| |||| |||  || |||||||||||||  |||| | |||||||| |||||    
T  26423433 tccagtggcaagaaactccttccaaggacgtacccaaggaataccgggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacg 26423334  T
Q  212 agcc 215  Q
    ||||    
T  26423333 agcc 26423330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 110 - 205
Target Start/End: Original strand, 45447931 - 45448026
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    |||| |||||||||  |||| ||||||||| ||| ||| | |||||| |||| ||||||||  | ||||||||||||||| |||||||| ||||||    
T  45447931 gttctagtggcaaggagctccttccaaggacgtacccgagaaataccaggttcgatttccagggagaacaacgcttggctagtgcgcatccctcta 45448026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 45960148 - 45960030
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||| |||||  |||| ||||||||| ||||| ||||||||||| |||||||| |||| || |||||| |||||   ||||||||||||||| |||      
T  45960148 tccagtagcaaggagctctttccaaggacgtatc-ggggaataccgagtttgattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcata 45960050  T
Q  212 agccgaattattcgcccacc 231  Q
    ||||| |||| |||| ||||    
T  45960049 agccggattagtcgctcacc 45960030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 49142780 - 49142685
Alignment:
Q  147 ggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||| |||| | |  ||||||||||||| ||  |||| |||||||||| |||||||||| |||| | ||||||| ||| ||||||    
T  49142780 ggggaataccgggttcgattcctagggggaacaacgcttagccagtgcacatgcctctacgcacgagccggattagttgcccacctttgatgggtc 49142685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 23658143 - 23658272
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||| ||||| ||| || ||||||| |  ||| ||||||||  ||||||||||||||||  ||| |||||||||||  ||||    
T  23658143 tccagtggcaaggagctccttc-aaggacgtacccagggaatatccagttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacg 23658241  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||| | ||||||||||    
T  23658242 agccggattagtcgtccatctttggtgggtc 23658272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 8734830 - 8734702
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| |||||||||  ||||  ||||||| | |||| ||||||    |||||||| ||||||   ||||||||||||| | |||||||    
T  8734830 cagtggcaaggagctccttccaaggacatatctcgggaatatcaggttcgatttcttgggggaacaatgcttgggcagtgcgcatgcctcaacgcacgag 8734731  T
Q  214 ccgaattattcgcccaccattggtgggtc 242  Q
    ||  |||| ||||||||| ||||||||||    
T  8734730 ccagattagtcgcccacctttggtgggtc 8734702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 199
Target Start/End: Complemental strand, 22268175 - 22268088
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatg 199  Q
    ||||||||||||  |||||||||||||| |||   ||||||||||||||| |||| |||  |||||||||  |||||  |||||||||    
T  22268175 tccagtggcaaggagctcattccaaggacgtacttggggaataccgggttcgattcccagggggaacaacatttggccagtgcgcatg 22268088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 24983486 - 24983435
Alignment:
Q  191 gtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||| ||| |||||| |||| ||| ||||||||||||||||    
T  24983486 gtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtc 24983435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 27875233 - 27875104
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||| | ||||| |||||||||||| || |||| |||  ||||| ||| ||||||  |||| |||||||||| ||| |    
T  27875233 tccagtggcaagtagctccttccaag-acgtatctggggaataccggattcgattcccagggggaataacacttggccagtgcacatgcctctacgcatg 27875135  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    || || |||| ||| ||||| || |||||||    
T  27875134 agtcgcattagtcgtccacctttagtgggtc 27875104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 28396245 - 28396176
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||| ||| |||||||||||| || ||| |||||| |||| ||| | ||| ||||||||||    
T  28396245 gggaacaacgcttagctggtgcgcatgcctttacgcatgagccggattagtcgtctacctttggtgggtc 28396176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 39474916 - 39475033
Alignment:
Q  126 gctcattccaaggatgtatccgggga-ataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattc 224  Q
    |||| |||||| || ||||||||||  |||||||||| |||| | |  |||||||||||||||   |||||||| |||||| ||| |||||| |||| ||    
T  39474916 gctctttccaaagacgtatccgggggtataccgggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtc 39475015  T
Q  225 gcccaccattggtgggtc 242  Q
    | ||||| || |||||||    
T  39475016 gtccacctttagtgggtc 39475033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 6358297 - 6358167
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||| |||||||| ||||| |||||||||||||||| | || ||||||||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  6358297 tccagtggcaagaagctcattcaaaggacgtatccggggaataccagattcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatg 6358198  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||||||||||||||    
T  6358197 agccggattagtcgtccaccattggtgggtc 6358167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 417 - 563
Target Start/End: Complemental strand, 16644571 - 16644421
Alignment:
Q  417 aatgtaatgactcgagataggtccaagagaatataataatccaagtagataaagattatgatgagttaattacat----tatatattttagaggtgagtc 512  Q
    ||||||||||| | |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||  ||    | |||||| |||||||||||     
T  16644571 aatgtaatgacccaagataggttcaagagaatataacaattcaagtagataaagattatgatgagttaattgtattctatctatattatagaggtgagta 16644472  T
Q  513 atcatgttctaaaagaatctagagagatcttttgtgatgagtcattggaat 563  Q
    ||||||||||| ||| || || ||||||| |||||||||| | ||||||||    
T  16644471 atcatgttctagaaggatatatagagatcctttgtgatgaattattggaat 16644421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 25540550 - 25540420
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||||| ||||||||| ||||| |||| | |  ||||||||||||||||  ||||||||||||||| |||||    
T  25540550 tccagtggcaaggagctcattccaaggacgtatctggggaatactgggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacg 25540451  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  25540450 agccggattagtcgtccacctttggtgggtc 25540420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 112 - 240
Target Start/End: Complemental strand, 3644033 - 3643905
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||| |||  |||||||||||||| |||||||||||||||||||||||||||| |   |||||||||||||||  ||||||||||||||| ||| |    
T  3644033 tccagtggaaaggagctcattccaaggacgtatccggggaataccgggtttgatttctacgaggaacaacgcttggccagtgcgcatgcctctacgcatg 3643934  T
Q  212 agccgaattattcgcccaccattggtggg 240  Q
    ||| | |||| ||| ||||| ||||||||    
T  3643933 agctggattagtcgtccacctttggtggg 3643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 10823034 - 10823150
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| |||||||||||||||||||||| |||   |||||||||||||||  ||||||||||||||| |||||||||| |||| |||    
T  10823034 gctccttccaaggacgtacccggggaataccgggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcg 10823133  T
Q  226 cccaccattggtgggtc 242  Q
    |||||| || |||||||    
T  10823134 cccaccttttgtgggtc 10823150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 38005362 - 38005489
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||| ||||| |||| |||| ||||||||||||||||  |||||||||||||||  || |    
T  38005362 tccagtggcaaggagctccttccaaggacgtacccggggaatactgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatg 38005461  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||||| |||| ||||||||| |||||||    
T  38005462 agccggattagtcgcccacctttggtgg 38005489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 44139463 - 44139574
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||||| ||| ||||||||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| |||||||||| |||| ||||||||    
T  44139463 ttccaaggatgcatctggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgcacgagccggattagtcgcccac 44139562  T
Q  231 cattggtgggtc 242  Q
    || |||||||||    
T  44139563 caatggtgggtc 44139574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 45263813 - 45263683
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||  || |||||||||||||||||||| |||| ||| |||||||||||||||||  ||||||||||||||| |||||    
T  45263813 tccagtggcaaggagctcctttcaaaaatttatccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacg 45263714  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| || | ||||||||||    
T  45263713 agccggattaatcgctcatctttggtgggtc 45263683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 111 - 242
Target Start/End: Original strand, 41220594 - 41220725
Alignment:
Q  111 ttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 210  Q
    |||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||   |||||||||||||||  ||||||||||||||| |||     
T  41220594 ttccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcat 41220693  T
Q  211 gagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||| |||  |||| || |||||||    
T  41220694 gagccgaattagtcgttcacctttagtgggtc 41220725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 34356166 - 34356296
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||||||||| ||||| ||||||||||||||| ||||||||  ||||||||| |||||   ||||||||||||||||||| |    
T  34356166 tccagtggcaaggagctatttccaaggacgtatctggggaataccgggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatg 34356265  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||||||| ||||||    
T  34356266 agccggattaatcgtgcaccattgatgggtc 34356296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 38962723 - 38962853
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||| |||  ||||||| |||||| ||||||||||||||||||||| ||||| ||   |||||||||||||||  ||||||||||||||| ||| |    
T  38962723 tccagtggtaaggagctcatttcaaggacgtatccggggaataccgggttcgattttcaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 38962822  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | ||| |||| ||| ||||| ||||||||||    
T  38962823 aaccggattagtcgtccacctttggtgggtc 38962853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 331461 - 331590
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||| ||||||||||||||||| |||| |||  ||||||||| ||||||  |||||||||| |||| ||| |    
T  331461 tccagtggcaatgagctctttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatg 331560  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| ||||||||| |||||||||    
T  331561 agccggattagtcgcccacctttggtgggt 331590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 127 - 240
Target Start/End: Complemental strand, 9360879 - 9360766
Alignment:
Q  127 ctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgc 226  Q
    ||||||||||||| ||| |||||||||||| |||| |||| | | ||| ||||||| |||||  ||||||||||||||| ||||||||||||||| ||||    
T  9360879 ctcattccaaggacgtacccggggaataccaggttcgattactagaggaaacaacgtttggccagtgcgcatgcctctacgcacgagccgaattagtcgc 9360780  T
Q  227 ccaccattggtggg 240  Q
    ||||| || |||||    
T  9360779 ccacctttagtggg 9360766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 12455303 - 12455400
Alignment:
Q  145 ccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||| ||||||||  || |||||||||| ||  ||||||||||||||| |||||||||| |||| |||| |||||||||||||||    
T  12455303 ccggggaataccgggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtc 12455400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 20612682 - 20612550
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatt-tccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 210  Q
    ||||||||||||  |||| |||||||| ||||| |||||||||||||||| |||| ||   |||||||||| ||||||  |||||||||||||||||||     
T  20612682 tccagtggcaaggagctccttccaaggttgtattcggggaataccgggttcgattctcaggagggaacaacacttggccagtgcgcatgcctctatgcat 20612583  T
Q  211 gagcc-gaattattcgcccaccattggtgggtc 242  Q
    ||||| | |||| ||| ||||||||||||||||    
T  20612582 gagccgggattagtcgtccaccattggtgggtc 20612550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 35946713 - 35946828
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||||||| ||||| ||||||||||||||||| ||| |||| || | ||||||||||||||||   || ||||||||||| |||||||||| |||| |||    
T  35946713 gctcattctaaggacgtatccggggaataccgagttcgatt-cctaggggaacaacgcttggccattgtgcatgcctctacgcacgagccggattagtcg 35946811  T
Q  226 cccaccattggtgggtc 242  Q
     ||||||||||||||||    
T  35946812 tccaccattggtgggtc 35946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 230
Target Start/End: Original strand, 8410091 - 8410209
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |||| ||||| |||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  8410091 tccagtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 8410190  T
Q  212 agccgaattattcgcccac 230  Q
    ||||| |||| ||||||||    
T  8410191 agccggattagtcgcccac 8410209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 18902676 - 18902546
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||  |||||||||||||||| |||| |||  |||||||||||||| |  |||||| || ||||| |||||    
T  18902676 tccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacg 18902577  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| ||||||||| ||||||||||    
T  18902576 agccagattagtcgcccacctttggtgggtc 18902546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 344 - 502
Target Start/End: Complemental strand, 45134991 - 45134833
Alignment:
Q  344 ctatgaagaatgagtatgatgtgagctatttaactaccaccttgaggacaaggtgtttgtgtaagaccaatggaatgtaatgactcgagataggtccaag 443  Q
    ||||||||||||||||| |||| |||| ||||| |||||| ||||||| |||||||||||| |||| ||||||||| |||||||   |||||||  |||     
T  45134991 ctatgaagaatgagtataatgtaagctttttaattaccacattgaggataaggtgtttgtgcaagatcaatggaatataatgacctaagataggctcaat 45134892  T
Q  444 agaatataataatccaagtagataaagattatgatgagttaattacattatatatttta 502  Q
    | |||| | || || || ||| ||||||||| ||||||||| ||  |||| ||||||||    
T  45134891 ataataaagtagtctaaataggtaaagattacgatgagttagttgtattagatatttta 45134833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 21286404 - 21286533
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||   | ||||||||||| |  ||||||||||||||| |||||    
T  21286404 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgcacg 21286503  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||| | |||| || | || |||||||||||    
T  21286504 agctggattagtcactcatcattggtgggt 21286533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 11069852 - 11069968
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||||||||||||| ||| |||||||||||| |||| |||| | |  |||||||||| |||||  |||||||| |||||| |||||||| |||||| |||    
T  11069852 gctcattccaaggacgtacccggggaataccaggttcgattccgagggggaacaacgtttggccagtgcgcatacctctacgcacgagctgaattagtcg 11069951  T
Q  226 cccaccattggtgggtc 242  Q
     ||||| ||||||||||    
T  11069952 tccaccgttggtgggtc 11069968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 115 - 231
Target Start/End: Original strand, 44945557 - 44945672
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| |||  ||| |||||| |||||||||| ||| ||| |||||||||||| | ||||||||||||||| ||||||||    
T  44945557 agtggcaaggagctccttccaaggacgtactcggagaatactgggtttgattcccagagg-aacaacgcttggatagtgcgcatgcctctacgcacgagc 44945655  T
Q  215 cgaattattcgcccacc 231  Q
    || |||| |||||||||    
T  44945656 cggattagtcgcccacc 44945672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 39807031 - 39806904
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||||||||| || |||||| ||| ||||||||||||||||| |||| ||||  | ||||||| |||||  |||||||||||||||  ||||    
T  39807031 tccagtggcaagatgctccttacaaggacgtacccggggaataccgggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacg 39806932  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    || || |||| ||  ||||| |||||||    
T  39806931 agtcggattagtcatccacctttggtgg 39806904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 22593095 - 22593224
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||| | ||| |||| |||  |||||||||| |||||  ||||||||||||||| ||| |    
T  22593095 tccagtggcaaggagctccttccaaggacgtacccggggaatactgagttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatg 22593193  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  22593194 agccggattagtcgtccacctttggtgggtc 22593224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 37560133 - 37560263
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||| |||| |||| ||||||||| ||| ||| |||||||| |||| ||||  ||| |||||||||| ||||   ||||||||||||||| |||||    
T  37560133 tccagtggtaagaagctccttccaaggacgtacccgaggaataccaggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacg 37560232  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||| ||||||    
T  37560233 agccggattaatcgtccacctttgatgggtc 37560263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 41032051 - 41031922
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| || ||||| |||||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||    
T  41032051 tccagtggcaaggagctccttccaaggacgta-ccagggaacaccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacg 41031953  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| || |||||| ||||||||||    
T  41031952 agccggattagtcacccacctttggtgggtc 41031922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 42770797 - 42770667
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||||||| | |||||||||||  |||  ||  ||||||||||||||||  ||||||||||||||  |||||    
T  42770797 tccagtggcaaagagctccttccaaggacgtatccgagaaataccgggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacg 42770698  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  42770697 agccggattaatcgtccacctttggtgggtc 42770667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 7787040 - 7787143
Alignment:
Q  136 aggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 235  Q
    |||| ||| ||||||||||||||||| ||||||||  ||||||||  ||||||  || |||||||||||| |||||||||| |||| ||||||| | |||    
T  7787040 aggacgtacccggggaataccgggttcgatttccagggggaacaatacttggccagtacgcatgcctctacgcacgagccggattagtcgcccatctttg 7787139  T
Q  236 gtgg 239  Q
    ||||    
T  7787140 gtgg 7787143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 19976953 - 19976834
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| ||||| ||  ||||| |||| ||||   ||||||||| ||||| |||      
T  19976953 tccagtggcaagtagctctttccaaggacgtatccggggaataccgggttcgattttcagggggaataacgtttggtcagtgcgcatgtctctacgcata 19976854  T
Q  212 agccgaattattcgcccacc 231  Q
    || ||||||| |||||||||    
T  19976853 agtcgaattagtcgcccacc 19976834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 7747234 - 7747364
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| | |   ||||||||| |||||  ||| ||||||||||| ||| |    
T  7747234 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatg 7747333  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||| || |||||||    
T  7747334 agccggattagtcgttcacctttagtgggtc 7747364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 12864184 - 12864314
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| |||||| || |||| ||||||||||||| || ||||||||  ||||||||| |||||   ||||||||||||||  ||| |    
T  12864184 tccagtgacaaggagctccttccaatgacgtattcggggaataccggattcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatg 12864283  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| ||| ||||||||||||||||    
T  12864284 agccagattagtcgtccaccattggtgggtc 12864314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 2550828 - 2550957
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||||| |||||||||||||| |||||| |||| |||   |||||||| ||| ||  ||||||||| ||||| ||| |    
T  2550828 tccagtggcaaggagctccttacaaggacgtatccggggaatatcgggttcgattcccaggaggaacaacacttagccagtgcgcatgtctctacgcatg 2550927  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| ||||||||  |||||||||    
T  2550928 agccggattagtcgcccacttttggtgggt 2550957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 227
Target Start/End: Original strand, 15079462 - 15079558
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcc 227  Q
    ||||||||| ||| ||||||||||| ||||| ||||||||  |||||||||||||| |  ||| ||||| ||||| ||||||||| ||||| |||||    
T  15079462 ttccaaggacgtacccggggaatacagggttcgatttccagggggaacaacgcttgaccagtgtgcatgactctacgcacgagccaaattagtcgcc 15079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 3811818 - 3811707
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||  || |||||| |||||| |||| ||| |||||||||| |||||    |||||||||||||| ||| |||||| |||| ||||||||    
T  3811818 ttccaaggacgtactcgaggaatatcgggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccac 3811719  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  3811718 ctttggtgggtc 3811707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 10026762 - 10026632
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||||| |||  |||  ||||||||||| ||||  ||  |||||||||| |||||  ||||||||||||||| ||| |    
T  10026762 tccaatggcaaggagctccttccaaggacgtactcggaaaataccgggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatg 10026663  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  10026662 agccggattagtcgaccacctttggtgggtc 10026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 10046622 - 10046493
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||| | |||||||| |||||||||||| ||||  ||| || ||||||| ||| |  ||||||||||||||| ||| |    
T  10046622 tccaatggcaaggagctccttccaagaacgtatccggagaataccgggttcgattctcaagggaaacaacgtttgaca-gtgcgcatgcctctacgcatg 10046524  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  10046523 agccggattagtcgaccacctttggtgggtc 10046493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 37860515 - 37860413
Alignment:
Q  456 tccaagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagagagatcttttgtgatgagtc 555  Q
    ||||||||| ||||||||||||||||||| ||   ||| |||| ||||||||||||||||||||| || |||  | |||||||| |  || |||||||||    
T  37860515 tccaagtaggtaaagattatgatgagttagttg--ttagatatattagaggtgagtcatcatgttttagaagggtgtagagagacccgttatgatgagtc 37860418  T
Q  556 attgg 560  Q
    |||||    
T  37860417 attgg 37860413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 16034916 - 16035020
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||||||| ||||||||||||| ||||| ||   ||||||||||||| |  ||| |||||||| || | |||||||| |||| |||| |||    
T  16034916 ttccaaggacgtatccgaggaataccgggttcgattttcaggcggaacaacgcttgaccagtgtgcatgcctatacgtacgagccggattagtcgctcac 16035015  T
Q  231 cattg 235  Q
    |||||    
T  16035016 cattg 16035020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 242
Target Start/End: Original strand, 27725962 - 27726030
Alignment:
Q  174 ggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||| |||||||  ||||||||||||||| |||| ||||| |||| |||||||||| |||||||||    
T  27725962 ggaacaatgcttggccagtgcgcatgcctctacgcactagccggattagtcgcccaccaatggtgggtc 27726030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 34346419 - 34346303
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||||||||||||| ||| | ||||||||| ||||||||||  ||  ||||||||| ||||||  ||| ||||||||||| ||| ||| |  |||| |||    
T  34346419 gctcattccaaggacgtacctggggaatactgggtttgattatcagggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcg 34346320  T
Q  226 cccaccattggtgggtc 242  Q
    | |||| ||||||||||    
T  34346319 ctcacctttggtgggtc 34346303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 10669571 - 10669682
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||| | ||||  |||||||||||||| |||  | ||||||||||||||  ||||||||| ||||| ||||||| || |||| |||  |||    
T  10669571 ttccaaggacgtacctgggggctaccgggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcac 10669670  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  10669671 ctttggtgggtc 10669682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 29422175 - 29422294
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||| |||||  |||| || |||||| ||| ||||||||||| ||||| |||||||| |||||||||| ||||||   || |||| ||| || |||||    
T  29422175 tccagtagcaaggagctcctttcaaggacgtacccggggaatactgggttcgatttccagagggaacaacacttggccaatgagcatacctttacgcacg 29422274  T
Q  212 agccgaattattcgcccacc 231  Q
    ||||| |||| ||| |||||    
T  29422275 agccggattagtcgtccacc 29422294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 242
Target Start/End: Complemental strand, 43303399 - 43303308
Alignment:
Q  151 aataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||| |||||| ||||| ||| |||||||||||||| |  || ||||||||||||||||||||| | |||| ||||||| || || ||||||    
T  43303399 aatatcgggttcgattttcaaggggaacaacgcttgaccagtacgcatgcctctatgcacgagctggattaatcgcccatcaatgatgggtc 43303308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 226
Target Start/End: Complemental strand, 21180460 - 21180346
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |||  ||||||||| || |||| |||  | ||||||| ||||||  |||| |||||||||| |||||    
T  21180460 tccagtggcaaggagctccttccaaggacgtacccgaagaataccggattcgattcccatggagaacaacacttggccagtgcacatgcctctacgcacg 21180361  T
Q  212 agccgaattattcgc 226  Q
    ||||| |||| ||||    
T  21180360 agccggattagtcgc 21180346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 29653626 - 29653714
Alignment:
Q  151 aataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtggg 240  Q
    |||||||| || ||||||||  |  ||||||||||||   ||||||||||||||| ||||||||||||||| ||| ||||| ||||||||    
T  29653626 aataccggattcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgcacgagccgaattagtcg-ccacctttggtggg 29653714  T

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Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 14169736 - 14169625
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| |||| ||||||||| |||||| ||||  |   ||||||||| |||| |  ||||||||| ||||| ||| |||||| |||| ||| | ||    
T  14169736 ttccaaggacgtattcggggaatatcgggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctac 14169637  T
Q  231 cattggtgggtc 242  Q
    ||||||||||||    
T  14169636 cattggtgggtc 14169625  T

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Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 28616506 - 28616395
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    |||||||||  |||||| |||||| |||||| ||||| ||  ||||| ||| |||||   ||||||||||||||| |||||||||  |||| |||||||     
T  28616506 ttccaaggacatatccgcggaatatcgggttcgattttcagggggaataacacttgggcagtgcgcatgcctctacgcacgagccagattagtcgcccat 28616407  T
Q  231 cattggtgggtc 242  Q
    | || |||||||    
T  28616406 ctttagtgggtc 28616395  T

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Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 192 - 242
Target Start/End: Original strand, 21641990 - 21642040
Alignment:
Q  192 tgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||||||| ||| ||||||||||| |||||| || ||||||||||    
T  21641990 tgcgcatgcctctacgcatgagccgaattaatcgcccgcctttggtgggtc 21642040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 13026557 - 13026448
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||   ||| ||||||||| |||||| ||||||| |||||| ||||  ||   ||||||| | |||||  ||||||||||||||| ||| |    
T  13026557 tccagtggcaaggaactccttccaaggacgtatccagggaatatcgggttcgattatcaggaggaacaatgattggccagtgcgcatgcctctacgcatg 13026458  T
Q  212 agccgaatta 221  Q
    ||||| ||||    
T  13026457 agccggatta 13026448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 242
Target Start/End: Original strand, 16325616 - 16325685
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||| ||||||  ||| ||||||||||| ||| |||||  |||| ||| ||||||||||||||||    
T  16325616 gggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtc 16325685  T

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Target: scaffold0002 (Bit Score: 65; Significance: 5e-28; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 319385 - 319513
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||| |  ||||||||||||||||  |||||||| |||||||||| |    
T  319385 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaacgcttggccagtgcgcatccctctatgcatg 319484  T
Q  212 agccgaattattcgcccaccattggtggg 240  Q
    ||| | |||| ||| ||||| ||||||||    
T  319485 agctggattagtcgtccacctttggtggg 319513  T

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Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 205
Target Start/End: Original strand, 139427 - 139491
Alignment:
Q  141 gtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||| |||||||| |||||| |||| ||||| |||||||||||||||  |||| ||||||||||    
T  139427 gtatctggggaatatcgggttcgattcccaaaaggaacaacgcttggccagtgcacatgcctcta 139491  T

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Target: scaffold0002; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 536 - 663
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| ||||||||||||||||| ||||  ||  ||||||||| ||||    ||| ||||||||||| | | ||||    
T  536 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagc 635  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    |  |||| |||| |||| ||||||||||    
T  636 cagattagtcgctcacctttggtgggtc 663  T

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Target: scaffold0002; HSP #4
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 412158 - 412097
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttgg 187  Q
    |||| ||||||||| ||||||||||||||||| ||| ||||  ||  |||||||||||||||    
T  412158 gctccttccaaggacgtatccggggaataccgagttcgattcacagggggaacaacgcttgg 412097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 63; Significance: 7e-27; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 9808 - 9938
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| ||||||||||||||| | |||||||||| || ||||||||  ||||||||||||||||  ||||||||||||||| |||||    
T  9808 tccagtgacaaggagctccttccaaggatgtatctgaggaataccggattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacg 9907  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  9908 agccggattagtcgtccacctttggtgggtc 9938  T

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Target: chr8 (Bit Score: 63; Significance: 7e-27; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 2467264 - 2467138
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| ||||||||  ||||||||| ||||||  ||||||||| ||||||||| |    
T  2467264 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttcgatttccagggggaacaactcttggccagtgcgcatgtctctatgcatg 2467165  T
Q  212 agccgaattattcgcccaccattggtg 238  Q
    ||||| |||| ||| |||| |||||||    
T  2467164 agccggattagtcgtccacaattggtg 2467138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 14666217 - 14666087
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||||||| |||| |||  || |||||| ||||||  ||||||||||||||| ||||     
T  14666217 tccagtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcaca 14666118  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| ||||||||  ||||||||||    
T  14666117 agccagattagtcgcccacagttggtgggtc 14666087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 112 - 215
Target Start/End: Complemental strand, 38922560 - 38922457
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| ||| |||||||||||||||||  |||||||||||| || |||||    
T  38922560 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccagagggaacaacgcttggccagtgcgcatgcctttacgcacg 38922461  T
Q  212 agcc 215  Q
    ||||    
T  38922460 agcc 38922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 8141066 - 8141196
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||||||||| |||| |||||||||||||||| ||||||||  || |||||||||||||  ||||||||||||||| ||| |    
T  8141066 tccagtggcaaggagctgcttccaaggacgtattcggggaataccgggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatg 8141165  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| |||||| ||| ||||  ||||||||||    
T  8141166 agctgaattagtcgtccacatttggtgggtc 8141196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 15884701 - 15884572
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||| |||  |||| ||||||||| ||| | ||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  15884701 tccagtggtaaggagctccttccaaggacgtacctggggaataccgggttcgattcccag-gggaacaacacttggcaagtgcgcatgcctctacgcacg 15884603  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  15884602 agccggattagtcgcccacctttggtgggtc 15884572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 44893424 - 44893294
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| |||||||||||||||||  ||||| |  |||||||| |||||||  ||| ||||||||||| |||||    
T  44893424 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcaatttctagggggaacaatgcttggccagtgtgcatgcctctacgcacg 44893325  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| |||| ||| ||||||    
T  44893324 agccggattaatcgctcacccttgatgggtc 44893294  T

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Target: chr8; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 1013123 - 1013014
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||  ||||||||| ||||||||||||||||||||| |||| |||  ||||||||||||||||  || | |||||||||| ||| |    
T  1013123 tccagtggcaaggagctttttccaaggacgtatccggggaataccgggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatg 1013024  T
Q  212 agccgaatta 221  Q
    ||||||||||    
T  1013023 agccgaatta 1013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 6042818 - 6042915
Alignment:
Q  145 ccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||  ||||||||||||  | ||| |||||| |||| |||||||||| |||||||||    
T  6042818 ccggggaataccgggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctaaacgcatgagccggattagtcgcccaccactggtgggtc 6042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 17981405 - 17981531
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||||||| ||||| ||||||||||| |||| |||  ||||||||| |||| |  ||| ||||||||||| |||||    
T  17981405 tccagtggcaaggagctccttccaaggatgtacccgggaaataccgggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgcacg 17981504  T
Q  212 agccgaattattcgcccaccattggtg 238  Q
    || ||||||| | ||||| | ||||||    
T  17981505 agtcgaattagttgcccagctttggtg 17981531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 43032865 - 43032995
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || ||||||  ||||||| ||| |||| ||| || |||| |||  ||||||||||||||||  |||||||||||||||  ||||    
T  43032865 tccagtggcaaggagttccttccaaaaatgtatctgggaaatatcggattcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacg 43032964  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  43032965 agccggattagtcgcccacctttggtgggtc 43032995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 45521133 - 45521262
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | |||||||||||||||| ||||||||||||||||| || |||| | ||||||||| ||||    ||||||||||||||| ||| |    
T  45521133 tccagtggcaaggagttcattccaaggatgtacccggggaataccgggttcga-ttcccaggggaacaacacttgatcagtgcgcatgcctctacgcatg 45521231  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||| |||| ||| ||||||    
T  45521232 agccggattagtcgctcacctttgatgggtc 45521262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 114 - 242
Target Start/End: Original strand, 6100438 - 6100566
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| || |||||| ||||||||||||||||||||| |||| |||   |||||||||||||||  ||||||||||| ||| ||| |||    
T  6100438 cagtggcaaggagctcctttcaaggacgtatccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgag 6100537  T
Q  214 ccgaattattcgcccaccattggtgggtc 242  Q
    ||| |||| |||  |||| || |||||||    
T  6100538 ccggattagtcgttcacctttagtgggtc 6100566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 112 - 229
Target Start/End: Original strand, 13085488 - 13085605
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||| ||  |||| ||||||||| ||||||||||||||||||||| ||||  || ||||||||||| || ||  ||| |||| |||||| |||||    
T  13085488 tccagtggcgaggagctccttccaaggacgtatccggggaataccgggttcgattctcagagggaacaacgtttagccagtgtgcatacctctacgcacg 13085587  T
Q  212 agccgaattattcgccca 229  Q
    ||||  |||| |||||||    
T  13085588 agccagattaatcgccca 13085605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 9860142 - 9860014
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccgggg-aataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 210  Q
    |||||||||||   |||| ||||||||| |||||||||| ||||||||||| |||| |||  ||||||||| ||||||  ||| |||||||||||  ||     
T  9860142 tccagtggcaaagagctccttccaaggacgtatccgggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacat 9860043  T
Q  211 gagccgaattattcgcccaccattggtgg 239  Q
    |||||  |||| ||| |||||||||||||    
T  9860042 gagccagattagtcgtccaccattggtgg 9860014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 2964043 - 2964170
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||| | ||| ||||||||||||| ||| |||| | |   |||||||||||||||   || ||||||||||| |||||| |    
T  2964043 agtggcaagtagctccttccaagaacgtacccggggaataccgtgttcgattccgatgaggaacaacgcttggccaatgtgcatgcctctacgcacgaac 2964142  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| ||||||||| ||||||||||    
T  2964143 cggattagtcgcccacctttggtgggtc 2964170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 24837206 - 24837333
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||| | ||| ||||||||||||| ||| |||| |||  | ||||||||||||||  |||  |||||||||| |||||    
T  24837206 tccagtggcaaggagctccttccaagtacgtacccggggaataccgtgttcgattcccagggagaacaacgcttggccagtgttcatgcctctaagcacg 24837305  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||| | |||| ||| ||||| |||||||    
T  24837306 agcaggattagtcgtccacctttggtgg 24837333  T

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Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 198
Target Start/End: Original strand, 6940522 - 6940608
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcat 198  Q
    |||||||| |||  |||||||||||||| ||||||||  |||| |||||| ||||||||   |||||||||||||||| ||||||||    
T  6940522 tccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggttcgatttccaggtggaacaacgcttggctagtgcgcat 6940608  T

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Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 18373974 - 18374104
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  ||||||||||| ||| |||||||| |||||| |||| ||||  ||  | |||||||||||| |  ||||||||||||||| ||| |    
T  18373974 tccaatggcaaggagctcattccaaagatatatccgggaaataccaggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatg 18374073  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||| | ||||||||||    
T  18374074 agccggattagtcgtccaactttggtgggtc 18374104  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 10927592 - 10927700
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 233  Q
    |||||| ||| ||||||||||||||||| |||| | |   |||||||||||||||  ||||||||||||||| ||| |||||| |||| |||  |||| |    
T  10927592 caaggacgtacccggggaataccgggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctt 10927691  T
Q  234 tggtgggtc 242  Q
    | |||||||    
T  10927692 tagtgggtc 10927700  T

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Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 7673800 - 7673686
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||| |||||||| |  ||| ||||   |  |||||||||| |||||| ||| ||||||||||| |||||    
T  7673800 tccagtggcaaggagctccttccaaggacgtatctggggaatatcaagttcgatt---agggggaacaacgtttggctagtgtgcatgcctctacgcacg 7673704  T
Q  212 agccgaattattcgccca 229  Q
    ||||| ||| ||||||||    
T  7673703 agccggatttttcgccca 7673686  T

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Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 33401945 - 33401826
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||||| |||  |||||||||||||||| ||||| ||  ||||||||| |||| |  ||| ||||||||||| ||| |    
T  33401945 tccagtggcaaggagctcctttcaaggacgtactcggggaataccgggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatg 33401846  T
Q  212 agccgaattattcgcccacc 231  Q
    || || |||| |||||||||    
T  33401845 agtcggattagtcgcccacc 33401826  T

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Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 34846778 - 34846880
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||||||||| ||| ||||| ||||||||||| |||| |||  | ||||||||||||||  ||  ||||||||||| ||||     
T  34846778 tccagtggcaaggagctcattccaaggacgtacccggg-aataccgggttcgattcccatggtgaacaacgcttggccagtatgcatgcctctacgcaca 34846876  T
Q  212 agcc 215  Q
    ||||    
T  34846877 agcc 34846880  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 44031567 - 44031464
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggc-----ttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    ||||||||||||| ||||| |||| |||||| ||||||||  ||||||||||||||||     | ||| ||||||||||  |||||||||| |||| |||    
T  44031567 ttccaaggatgtaaccgggaaatatcgggttcgatttccagggggaacaacgcttggccagtgtagtgtgcatgcctctgcgcacgagccggattagtcg 44031468  T
Q  226 ccca 229  Q
    ||||    
T  44031467 ccca 44031464  T

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Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 242
Target Start/End: Complemental strand, 11298353 - 11298283
Alignment:
Q  172 agggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| ||| ||  ||||||||||||||||||| ||||| ||||| |||| |||| ||||||||||    
T  11298353 agggaacaacacttagccagtgcgcatgcctctatgcatgagccaaattaatcgctcacctttggtgggtc 11298283  T

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Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 4479381 - 4479312
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||  ||||||||||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  4479381 gggaacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtc 4479312  T

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Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 17845697 - 17845824
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| |||||||||||||  ||||||||| | ||||||| |||| | ||||||||| ||||||| |||| ||| |||||| ||||     
T  17845697 tccagtggcaatgagctccttccaaggatgtactcggggaata-ctggtttga-ttcccaggggaacaacacttggctagtgcacattcctctacgcaca 17845794  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||   ||||| ||||||||| ||||||||||    
T  17845795 agtttaattaatcgcccacc-ttggtgggtc 17845824  T

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Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 11785894 - 11785982
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    |||||||||||||| ||| |||||||||||||| || || |||||| |||| ||||| ||||   ||| ||||||||||| ||| |||||    
T  11785894 gctcattccaaggacgtacccggggaataccggattcga-ttccaaggggagcaacgtttgggcagtgtgcatgcctctacgcatgagcc 11785982  T

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Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 500 - 541
Target Start/End: Original strand, 39587287 - 39587328
Alignment:
Q  500 ttagaggtgagtcatcatgttctaaaagaatctagagagatc 541  Q
    |||||||||||||||||||||||| ||| |||| ||||||||    
T  39587287 ttagaggtgagtcatcatgttctagaaggatcttgagagatc 39587328  T

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Target: chr5 (Bit Score: 62; Significance: 3e-26; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 19572685 - 19572814
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||||||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  19572685 tccagtggcaaggagctccttccaaggacgtatccggggaataccgggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 19572784  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| |||  ||||||||||||||    
T  19572785 agccggattagtcgttcaccattggtgggt 19572814  T

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Target: chr5; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 1538392 - 1538522
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||| |||| |||| |||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  1538392 tccagtggcaaggagctccttccgaggacgtattcggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 1538491  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||||||||||||||    
T  1538492 agccggattaatcgtccaccattggtgggtc 1538522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 42861364 - 42861234
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  ||||||||||||||  ||||||||||||| ||||||  |||||| | || |||||| ||||||  ||||||||||||||| ||| |    
T  42861364 tccagtggcaaggagctcattccaaggacatatccggggaatatcgggttcaatttcccagggaaacaacacttggccagtgcgcatgcctctacgcatg 42861265  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||||||||||||||    
T  42861264 agccggattaatcgtccaccattggtgggtc 42861234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 112 - 240
Target Start/End: Original strand, 30349540 - 30349668
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || ||||||||| |||||||||||||||||||||||||||| |  |||||||| | |||||  ||||||||||||||||||| |    
T  30349540 tccagtggcaaggagttccttccaaggacgtatccggggaataccgggtttgatttctagggggaacaatgattggccagtgcgcatgcctctatgcatg 30349639  T
Q  212 agccgaattattcgcccaccattggtggg 240  Q
    ||| |||||| ||| ||||| | ||||||    
T  30349640 agctgaattagtcgtccaccttaggtggg 30349668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 115 - 239
Target Start/End: Complemental strand, 38897861 - 38897738
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| || |||||| ||||  ||||||||||||||| ||||||||  ||||||||||||||||  ||||||||||||||| ||||||||    
T  38897861 agtggcaaggagctctttacaaggacgtatatggggaataccgggttcgatttccag-gggaacaacgcttggccagtgcgcatgcctctacgcacgagc 38897763  T
Q  215 cgaattattcgcccaccattggtgg 239  Q
    || |||| | ||||||| |||||||    
T  38897762 cggattagttgcccacctttggtgg 38897738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 112 - 239
Target Start/End: Original strand, 20525799 - 20525926
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || ||||||||||||||||||||| |||||| |||| |||   |||||||| ||| ||  ||||||||||||||| ||| |    
T  20525799 tccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatg 20525898  T
Q  212 agccgaattattcgcccaccattggtgg 239  Q
    ||||| |||| ||| |||||||||||||    
T  20525899 agccggattagtcgtccaccattggtgg 20525926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 25417329 - 25417199
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||  |||||||||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| | |||    
T  25417329 tccagtggcaaggagctccttccaaggacgtactcggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacg 25417230  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||    ||||||||||||||    
T  25417229 agccggattagtcatttaccattggtgggtc 25417199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 42086292 - 42086418
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||||| ||| ||| ||||||||||||| |||| |||  |||||||||||||| |  ||||||||||||||| ||| |||||    
T  42086292 gtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagcc 42086391  T
Q  216 gaattattcgcccaccattggtgggtc 242  Q
    | |||| ||| ||||| ||||||||||    
T  42086392 ggattagtcgtccacctttggtgggtc 42086418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 7866542 - 7866671
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||| ||||||||||||| |||| | |   |||||||||||||||  ||| ||||||||||| |||||    
T  7866542 tccagtggcaaggagctccttccaaggacgtacccgaggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcctctacgcacg 7866641  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    | ||| |||| ||||||||| |||||||||    
T  7866642 aaccggattagtcgcccacctttggtgggt 7866671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 1898964 - 1899085
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| ||||||||||||| ||||||||||||||||| |||| |||  ||||||||||||||||  ||||||||||      |||||||    
T  1898964 cagtggcaaggagctccttccaaggatgtacccggggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgc------gcacgag 1899057  T
Q  214 ccgaattattcgcccaccattggtgggt 241  Q
    |||||||| || |||||| || ||||||    
T  1899058 ccgaattagtcacccaccttttgtgggt 1899085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 20682746 - 20682634
Alignment:
Q  129 cattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccc 228  Q
    ||||| ||||| ||| ||||||||||  ||||| ||||||||  ||||||||||||||||  ||||||||||||||| |||||||||| |||| ||| ||    
T  20682746 cattctaaggacgtacccggggaatattgggttagatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgacc 20682647  T
Q  229 accattggtgggt 241  Q
    ||| || ||||||    
T  20682646 acctttagtgggt 20682634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 12081892 - 12081995
Alignment:
Q  135 aaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 234  Q
    ||||| ||||||||||||||| ||||| ||||  ||  ||||||||||||||||  |||||||||| |||| ||||||||||||||| ||| ||||| ||    
T  12081892 aaggacgtatccggggaatactgggttcgattctcagggggaacaacgcttggccagtgcgcatgcatctacgcacgagccgaattagtcgtccaccttt 12081991  T
Q  235 ggtg 238  Q
    ||||    
T  12081992 ggtg 12081995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 14152011 - 14152134
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| |||||| | ||||||||||||||| ||||  || |||||||||||||||||  ||| |||||| ||||| || |    
T  14152011 tccagtggcaaggagctccttccaatgatgtacctggggaataccgggttcgattctcatagggaacaacgcttggccagtgtgcatgcttctatccatg 14152110  T
Q  212 agccgaattattcgcccaccattg 235  Q
    ||||| |||| ||| |||||||||    
T  14152111 agccggattaatcgtccaccattg 14152134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 4016401 - 4016271
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||| |||||||||||||| ||| | | | |||| |||||| ||||  ||  ||||||||| ||||||  |||||||||||||||  ||||    
T  4016401 tccagtggcaagaagctcattccaaggacgtacctgagaaatatcgggttcgattatcagggggaacaacacttggccagtgcgcatgcctctacacacg 4016302  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| | || |||||||||||||||    
T  4016301 agccggattagttgctcaccattggtgggtc 4016271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 9812833 - 9812963
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| | |   |||||||||||||||  ||| |||||| |||| ||| |    
T  9812833 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatg 9812932  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | ||| |||| ||||||||| ||||||||||    
T  9812933 aaccggattagtcgcccacctttggtgggtc 9812963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 126 - 239
Target Start/End: Original strand, 5079306 - 5079419
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||| | ||||||| ||||||||||| ||||||||||  ||||||| |||||||    ||||||||| |||| |||||||||| |||| |||    
T  5079306 gctccttccaagcacgtatccgtggaataccggggttgatttccagggggaacagcgcttggtcaatgcgcatgcttctacgcacgagccggattagtcg 5079405  T
Q  226 cccaccattggtgg 239  Q
    |||||| |||||||    
T  5079406 cccacctttggtgg 5079419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 112 - 205
Target Start/End: Complemental strand, 5732066 - 5731973
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| |||   |||||||||||||||  |||||||||||||||    
T  5732066 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctcta 5731973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 150 - 242
Target Start/End: Original strand, 9805003 - 9805095
Alignment:
Q  150 gaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||||| |||| |||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| ||| ||||| ||||||||||    
T  9805003 gaataccgggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 9805095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 112 - 216
Target Start/End: Original strand, 28857089 - 28857193
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| | | ||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |    
T  28857089 tccagtggcaaggagctccttccaaggacgcacccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatg 28857188  T
Q  212 agccg 216  Q
    |||||    
T  28857189 agccg 28857193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 8513483 - 8513610
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| | |  || ||||| |||||||  |||| |||||||||| ||||||||    
T  8513483 agtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagc 8513582  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    |  |||| ||| ||||| ||||||||||    
T  8513583 cagattagtcgtccacctttggtgggtc 8513610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 26077102 - 26077205
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||| |||  |||||||||||||| ||||  |||||||||  |||| |||| ||| |||||||||||||||||  |||| |||||||||| |||||    
T  26077102 tccagtggtaaggagctcattccaaggacgtatttggggaatactaggttcgattcccagagggaacaacgcttggccagtgcacatgcctctacgcacg 26077201  T
Q  212 agcc 215  Q
    ||||    
T  26077202 agcc 26077205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 242
Target Start/End: Original strand, 32874799 - 32874878
Alignment:
Q  163 gatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||| ||| |||||||||||||| || |||||||| ||| || ||||||||||||||| ||| ||||||||||||||||    
T  32874799 gattttcaaggggaacaacgcttgactagtgcgcatacctttacgcacgagccgaattaatcgtccaccattggtgggtc 32874878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 115 - 241
Target Start/End: Complemental strand, 11845944 - 11845818
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| ||| | |||| |||||| |||||| |  |||||||||| |||||  ||||||||||||||| | | ||||    
T  11845944 agtggcaaggagctccttccaaggacgtacccgagaaatatcgggttcgatttcgagggggaacaacgtttggccagtgcgcatgcctctacgtatgagc 11845845  T
Q  215 cgaattattcgcccaccattggtgggt 241  Q
    ||||||| ||||||||| ||| |||||    
T  11845844 cgaattaatcgcccacctttgatgggt 11845818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 12704975 - 12705105
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| |||| | |   ||||||||||||| |  ||| |||||| |||| ||| |    
T  12704975 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatg 12705074  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    | ||| |||| ||||||||| ||||||||||    
T  12705075 aaccggattagtcgcccacctttggtgggtc 12705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 111 - 215
Target Start/End: Original strand, 15034036 - 15034139
Alignment:
Q  111 ttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 210  Q
    |||||||||||||| |||| ||||||||||||| |||||||||||||||||  |||||||  || |||||| |||||   ||| ||||||||||| |||     
T  15034036 ttccagtggcaaga-gctccttccaaggatgtacccggggaataccgggttcaatttccatgggaaacaacacttggtcagtgtgcatgcctctacgcat 15034134  T
Q  211 gagcc 215  Q
    |||||    
T  15034135 gagcc 15034139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 42291618 - 42291532
Alignment:
Q  145 ccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 231  Q
    |||| ||||||||||||||||| |||  | ||||||||||||||  |||| |||||||||| |||||||||| |||| ||| |||||    
T  42291618 ccggagaataccgggtttgattcccagggtgaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgtccacc 42291532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 7308512 - 7308391
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    |||| |||||||||  |||||||||||||| ||||  | |||||| |||||| |||| |||  |||||||||||||||   |||| |||||||||| |||    
T  7308512 gttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgca 7308413  T
Q  210 cgagccgaattattcgcccacc 231  Q
     |||||| |||| |||| ||||    
T  7308412 tgagccggattagtcgctcacc 7308391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 18136426 - 18136292
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| || |||||||| |||||||||||| |||| |||  ||||||||| |||||   ||| |||||||||||  || |    
T  18136426 tccagtggcaaggagctccttccaaagacgtatccggagaataccgggttcgattcccagggggaacaacacttggtcagtgtgcatgcctctacacatg 18136327  T
Q  212 agccg----aattattcgcccaccattggtgggtc 242  Q
    |||||    ||||| ||| ||||||||||||||||    
T  18136326 agccggattaattagtcgtccaccattggtgggtc 18136292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 23383655 - 23383748
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  23383655 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 23383748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 231
Target Start/End: Complemental strand, 24463986 - 24463913
Alignment:
Q  158 ggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 231  Q
    |||| ||||| ||| | |||||||| |||||  |||||||||||||||||||||||||| |||| |||||||||    
T  24463986 ggttcgattttcaaggcgaacaacgattggccagtgcgcatgcctctatgcacgagccggattagtcgcccacc 24463913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 239
Target Start/End: Original strand, 30995085 - 30995209
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| |||   |||||||||| |||| |||| |||  ||||||||| ||||||  | ||||||||||||| ||||||||    
T  30995085 agtggcaaggagctccttccaaggacgtacatggggaataccaggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagc 30995184  T
Q  215 cgaattattcgcccaccattggtgg 239  Q
    || |||| |||| || | |||||||    
T  30995185 cggattagtcgctcatctttggtgg 30995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 37263202 - 37263320
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  | || ||| ||||| ||| |||||||||| |||||| ||||  ||  ||||||||||||||||   |||||||||||||| |||||    
T  37263202 tccagtggcaaggagttccttctaaggacgtacccggggaatatcgggttcgattctcag-gggaacaacgcttggccaatgcgcatgcctctacgcacg 37263300  T
Q  212 agccgaattattcgcccacc 231  Q
    ||||| |||| ||| |||||    
T  37263301 agccggattagtcgtccacc 37263320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 231
Target Start/End: Original strand, 39728348 - 39728467
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||| | ||| |||||||||||| |||| ||||  || ||| |||||| ||||||  ||| ||||||||||| || ||    
T  39728348 tccagtggcaaggagctctttccaagaacgtacccggggaataccaggttcgattatcagaggaaacaacacttggccagtgtgcatgcctctacgctcg 39728447  T
Q  212 agccgaattattcgcccacc 231  Q
    || ||||||| |||| ||||    
T  39728448 agtcgaattagtcgctcacc 39728467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 2485158 - 2485287
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||||||||||||| |||| | |||||||| ||||| || |||| | ||||||||| || ||| |||||||||||||||| | | |    
T  2485158 tccaatggcaaggagctcattccaaggacgtattcagggaatactgggttcga-ttcctaggggaacaaccctgggcctgtgcgcatgcctctacgtatg 2485256  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    || || |||| |||| |||| ||| ||||||    
T  2485257 agtcggattagtcgctcacctttgatgggtc 2485287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 3654044 - 3653933
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||| |||| |||||||||||| |||| | | ||  ||||||||||| |  ||||||||||||||| ||||||| || |||| |||    
T  3654044 gctctttccaaggacgtacccggagaataccgggttcgattcctagag--aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcg 3653947  T
Q  226 cccaccattggtgg 239  Q
     ||||| |||||||    
T  3653946 tccacctttggtgg 3653933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 18262731 - 18262645
Alignment:
Q  145 ccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 231  Q
    |||||||||||||||||  |||| ||  |||||||||||||| |  |||||||| ||||||  ||||||||| |||| |||||||||    
T  18262731 ccggggaataccgggttctattttcagggggaacaacgcttgaccagtgcgcatacctctacacacgagccggattagtcgcccacc 18262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 20692913 - 20692991
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    ||||||||| ||| |||||||||||||||||||||| | | ||| |||||||||||||  || | ||||||||| ||||    
T  20692913 ttccaaggacgtacccggggaataccgggtttgattcctagaggaaacaacgcttggccagtacacatgcctctgtgca 20692991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 40117405 - 40117503
Alignment:
Q  141 gtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgg 239  Q
    |||| ||||||||| ||  || ||||||||  ||||||||||||||||  ||||||||||||||| ||| |||||| |||| |||  |||| |||||||    
T  40117405 gtattcggggaatatcgaattcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtgg 40117503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 41163605 - 41163476
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||| | ||| ||||||||||||||||| || |||| | |||||||||| |||||  |||| |||| ||||| ||| |    
T  41163605 tccagtggcaaggagctccttccaagaacgtacccggggaataccgggttcga-ttcccaggggaacaacgtttggccagtgcacatgtctctacgcatg 41163507  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| | |||| ||| ||||| || |||||||    
T  41163506 agctggattagtcgtccaccttttgtgggtc 41163476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 7336604 - 7336708
Alignment:
Q  135 aaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccatt 234  Q
    ||||| ||||||| |||||| |||||| |||||| || | |||||||||||     ||||||||||||||| |||||||||| |||| ||| | ||| ||    
T  7336604 aaggacgtatccgaggaatatcgggttcgatttctaaggagaacaacgctttatcagtgcgcatgcctctacgcacgagccggattaatcgtctaccttt 7336703  T
Q  235 ggtgg 239  Q
    |||||    
T  7336704 ggtgg 7336708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 238
Target Start/End: Complemental strand, 14588741 - 14588637
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 233  Q
    |||||| ||||| |||||||| |||||| ||||| ||   |||| |||||||| |  ||||||||||||||| ||| |||||| |||| ||| ||||| |    
T  14588741 caaggacgtatctggggaatatcgggttcgattttcaggaggaataacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctt 14588642  T
Q  234 tggtg 238  Q
    |||||    
T  14588641 tggtg 14588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 9168379 - 9168269
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    |||||| || ||||||||||||||||| |   |||| ||| | |||||||||||||||  |||||||| |||||| ||| |||||| |||| ||| ||||    
T  9168379 ttccaaagacgtatccggggaataccgagaacgattcccaga-ggaacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccac 9168281  T
Q  231 cattggtgggtc 242  Q
    | || |||||||    
T  9168280 ctttagtgggtc 9168269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 215
Target Start/End: Original strand, 13664225 - 13664324
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||||| |||||  ||||||||||| || ||||  ||  ||||||||| ||||||  ||||||||||||||| ||| |||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccggattcgattatcagggggaacaacacttggccagtgcgcatgcctctacgcatgagcc 13664324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 6767197 - 6767143
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatt 166  Q
    ||||||||||||  |||| ||||||||| ||| ||||||||||||||||| ||||    
T  6767197 tccagtggcaaggagctccttccaaggacgtacccggggaataccgggttcgatt 6767143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 21149732 - 21149822
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgg 239  Q
    |||||||| |||| ||||| ||  |||||||||| ||| |  ||||||||| ||||| |||||||  | |||| |||||||||||||||||    
T  21149732 ggaataccaggttcgattttcagggggaacaacgtttgaccagtgcgcatgactctacgcacgagttggattagtcgcccaccattggtgg 21149822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 35561964 - 35561834
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| |||||| || |||||||||||||| || ||| || ||||| |||||||||| | || |  |||||||||||||||  || |    
T  35561964 tccagtggcaaagagctccttccaatgacgtatccggggaatatcgagttcgacttccagagggaacaacacctgaccagtgcgcatgcctctacacatg 35561865  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||  |||| |||| |||| ||||| ||||    
T  35561864 agccagattagtcgctcaccgttggtaggtc 35561834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 166
Target Start/End: Complemental strand, 35813140 - 35813090
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatt 166  Q
    ||||||||| |||||||||||||| ||| ||| ||||||||||||| ||||    
T  35813140 gtggcaagaagctcattccaaggacgtacccgaggaataccgggttcgatt 35813090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 1e-22; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 114 - 241
Target Start/End: Original strand, 18915830 - 18915957
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||  ||||||||| ||| ||||||||||||||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||||    
T  18915830 cagtggcaaggagcttcttccaaggacgtacccggggaataccgggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgag 18915929  T
Q  214 ccgaattattcgcccaccattggtgggt 241  Q
    ||| |||| |||| ||||||||||||||    
T  18915930 ccggattagtcgctcaccattggtgggt 18915957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 112 - 231
Target Start/End: Complemental strand, 43959968 - 43959849
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||| ||||| |||||| || ||| |||||||||| ||||||  ||| |||  ||||||||||||||||  ||||||||||||||| |||||    
T  43959968 tccagtggcaaggtgctccttccaatgacgtacccggggaatatcgggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgcacg 43959869  T
Q  212 agccgaattattcgcccacc 231  Q
    ||||| |||| |||||||||    
T  43959868 agccggattagtcgcccacc 43959849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 10173118 - 10172988
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||| ||||| ||||||||| ||||| |||||||||||| ||  ||| ||| |  ||||||||||||||  |||| |||||||||| ||| |    
T  10173118 tccagtggcaaggtgctccttccaaggacgtatctggggaataccggattcaattcccataaagaacaacgcttggccagtgcccatgcctctacgcatg 10173019  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||||||||| ||||||||||    
T  10173018 agccggattactcgcccacctttggtgggtc 10172988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 41664003 - 41663873
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||| ||||| ||||||||||||||||||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  41664003 tccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatg 41663904  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||| | |||| ||| ||||||||||||||||    
T  41663903 agctggattagtcgtccaccattggtgggtc 41663873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 112 - 221
Target Start/End: Complemental strand, 48798217 - 48798108
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| || |||||||||||||| |||||| ||||||||  |||||||||||||| || ||||||||||||||| ||| |    
T  48798217 tccagtggcaaggagctccttccaatgacgtatccggggaatatcgggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcatg 48798118  T
Q  212 agccgaatta 221  Q
    ||||| ||||    
T  48798117 agccggatta 48798108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 33004148 - 33004032
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| |||||||||||||| ||| || ||||||||  || ||||| |||||||  ||||||||||||||| |||||||||| |||| ||     
T  33004148 gctccttccaaggacgtatccggggaatatcggattcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgcacgagccggattagtca 33004049  T
Q  226 cccaccattggtgggtc 242  Q
    ||||||| |||||||||    
T  33004048 cccaccaatggtgggtc 33004032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 37339799 - 37339910
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaaggga-acaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgccca 229  Q
    ||||||||||||| ||||||||||||||||| |||| |||  |||  ||||||||||||  ||||||||||||| | |||||||||| |||| |||||||    
T  37339799 ttccaaggatgtacccggggaataccgggttcgattcccagggggggacaacgcttggccagtgcgcatgcctcaacgcacgagccggattagtcgccca 37339898  T
Q  230 ccattggtgggt 241  Q
    || |||||||||    
T  37339899 cctttggtgggt 37339910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 116 - 242
Target Start/End: Original strand, 8763956 - 8764082
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||||| ||| |||||||||| |||||| | || |||  ||||||||| ||||||  ||||||||||||||| |||||||||    
T  8763956 gtggcaaggagctccttccaaggacgtacccggggaatatcgggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcc 8764055  T
Q  216 gaattattcgcccaccattggtgggtc 242  Q
    | |||| ||| ||||| ||||||||||    
T  8764056 ggattagtcgtccaccgttggtgggtc 8764082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 26325773 - 26325903
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| || |||||| ||||||| |||||| |||||| |||| |||  ||||||||| |||||   ||||||||||||||| ||| |    
T  26325773 tccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatg 26325872  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||||||||||||||    
T  26325873 agccggattagtcgtccaccattggtgggtc 26325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 49078075 - 49078205
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||| ||||| ||||||||||||||||||||| |||| |||  || |||||| ||||||  ||||||||||||||| ||| |    
T  49078075 tccagtggcaaggagctccttctaaggacgtatccggggaataccgggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatg 49078174  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| |||  |||||||||| ||||    
T  49078175 agccggattagtcgttcaccattggtaggtc 49078205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 50503486 - 50503378
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccat 233  Q
    |||||| |||||||||||||| |||||| |||| |||  ||||||||| |||| |  ||||||||||||||| |||||||||| |||  ||||||||||     
T  50503486 caaggacgtatccggggaatatcgggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgcacgagccggatttgtcgcccaccaa 50503387  T
Q  234 tggtgggtc 242  Q
    |||||||||    
T  50503386 tggtgggtc 50503378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 115 - 242
Target Start/End: Complemental strand, 40288621 - 40288494
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| |||| |||||||||||||||| ||||||||  |||||||||| |||||  ||  |||||||||||  |||||||    
T  40288621 agtggcaaggagctctttccaaggacgtattcggggaataccgggttcgatttccagggggaacaacggttggccagtatgcatgcctctacacacgagc 40288522  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| |||| || | ||||||||||    
T  40288521 cggattagtcgctcatccttggtgggtc 40288494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Original strand, 5855483 - 5855613
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| |||| |||||||||||||||| |||| |||   |||||||||||||||  ||||||||||||||| ||| |    
T  5855483 tccagtggcaaggagctccttccaaggacgtattcggggaataccgggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatg 5855582  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    || || |||| |||  |||| || |||||||    
T  5855583 aggcggattagtcgttcacctttagtgggtc 5855613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 11398035 - 11397906
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||||||| || |||| | |||||||||| |||||   |||| ||||||||| ||| |    
T  11398035 tccagtggcaaggagctccttccaaggatgtatccggagaataccgggttcga-ttccgaggggaacaacgtttggccaatgcgtatgcctctacgcatg 11397937  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    || || |||| ||| ||||| ||||||||||    
T  11397936 agtcggattagtcgtccacctttggtgggtc 11397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 30927874 - 30927744
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| ||| | ||| |||| |||||| |||||||| |||||||||||||||||   || ||||||||||| ||| |    
T  30927874 tccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatg 30927775  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||  ||||||||||    
T  30927774 agccggattagtcgtccacttttggtgggtc 30927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 33418262 - 33418132
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| |||||| || ||| |||| ||||||||| || |||| | |  ||| ||||||||||||  |||||||||||||||||||||    
T  33418262 tccagtggcaaggagctccttccaaagacgtacccggagaataccggattcgattcctaggggggacaacgcttggccagtgcgcatgcctctatgcacg 33418163  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||| ||||    
T  33418162 agccggattagtcgtccacctttggtcggtc 33418132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 115 - 201
Target Start/End: Complemental strand, 34334439 - 34334353
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcc 201  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||| |||| |||  ||||||||| ||||||  |||||||||||    
T  34334439 agtggcaaggagctcattccaaggacgtatccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcc 34334353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 112 - 241
Target Start/End: Complemental strand, 9659325 - 9659197
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||||||| ||||| |||  |||||||||||||||| |||| |||  |||||||||| ||| || |||||||||||| || ||| |    
T  9659325 tccagtggcaaggagctcattctaaggacgtactcggggaataccgggttcgattcccag-gggaacaacgtttgactagtgcgcatgcctttacgcatg 9659227  T
Q  212 agccgaattattcgcccaccattggtgggt 241  Q
    ||||| |||| ||| ||||| |||||||||    
T  9659226 agccggattagtcgtccacctttggtgggt 9659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 110 - 231
Target Start/End: Original strand, 10336475 - 10336596
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    ||||||||||||||  |||| |||||| || |||||||| ||||| |||||| ||||| ||  |||||||||||||| |  ||||||||||||||| |||    
T  10336475 gttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgca 10336574  T
Q  210 cgagccgaattattcgcccacc 231  Q
     |||||| |||| ||| |||||    
T  10336575 tgagccggattaatcgtccacc 10336596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 21849291 - 21849222
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||| |||| ||| |||||||||||    
T  21849291 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtc 21849222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 237
Target Start/End: Original strand, 10422751 - 10422874
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| |||||| || |||| |||||||||||||||| |||||| |   |||||||| ||||||  ||||||||||||||| ||| |||    
T  10422751 cagtggcaaggagctccttccaatgacgtattcggggaataccgggttcgatttctaggaggaacaacacttggccagtgcgcatgcctctacgcatgag 10422850  T
Q  214 ccgaattattcgcccaccattggt 237  Q
    ||| |||| ||| ||||| |||||    
T  10422851 ccggattagtcgtccacctttggt 10422874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 242
Target Start/End: Complemental strand, 14254400 - 14254285
Alignment:
Q  127 ctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgc 226  Q
    ||||||||||||| |||| |||||||||||| ||| ||||| ||  ||||||||||||||||  || ||||||||| || ||| |||||| |||| |||     
T  14254400 ctcattccaaggacgtattcggggaataccgagttcgattttcagggggaacaacgcttggccagtacgcatgcctttacgcatgagccggattagtcgt 14254301  T
Q  227 ccaccattggtgggtc 242  Q
    ||||| ||| ||||||    
T  14254300 ccacctttgatgggtc 14254285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 420 - 522
Target Start/End: Complemental strand, 2846076 - 2845974
Alignment:
Q  420 gtaatgactcgagataggtccaagagaatataataatccaagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgt 519  Q
    |||||||||| ||||||||| |||||||||  |||| | |||||| ||||||||||||| || ||||| ||||| |||||||| ||| |||| ||| |||    
T  2846076 gtaatgactcaagataggtctaagagaataggataagctaagtaggtaaagattatgataaggtaattgcattagatattttaaaggcgagttatcgtgt 2845977  T
Q  520 tct 522  Q
    |||    
T  2845976 tct 2845974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 17642151 - 17642021
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||| ||||  |||| ||||| ||| ||| || || ||||| ||||| |||| |||  ||||||||| ||||||  ||||||||||||||| |||||    
T  17642151 tccagtgacaaggagctccttccacggacgtacccaggaaatactgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacg 17642052  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    ||||| |||| ||| ||||| ||||||||||    
T  17642051 agccggattagtcgtccacctttggtgggtc 17642021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 242
Target Start/End: Complemental strand, 32142978 - 32142863
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||||||||||||| ||| || || ||||||||||| ||||| ||  ||||||||| ||||||  |||||||||||| || ||| ||||||||||| |||    
T  32142978 gctcattccaaggacgtaccctgg-aataccgggttcgattttcagggggaacaacacttggccagtgcgcatgcctttacgcatgagccgaattagtcg 32142880  T
Q  226 cccaccattggtgggtc 242  Q
    | |||| ||| ||||||    
T  32142879 ctcacctttgatgggtc 32142863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 239
Target Start/End: Complemental strand, 12036887 - 12036764
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||| |||| ||||||||| ||| |  | |||||| |||||||||| | |  |||||||| |||||||  ||||||||||||||| |||||||||    
T  12036887 gtggcaagaagctccttccaaggacgtacctagagaatactgggtttgattcctagggggaacaatgcttggccagtgcgcatgcctctacgcacgagcc 12036788  T
Q  216 gaattattcgcccaccattggtgg 239  Q
      |||| ||| ||||| |||||||    
T  12036787 agattaatcgtccacctttggtgg 12036764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 31152680 - 31152803
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||||||| || |||||||||||||| |||||||   ||||| |||||||||   |||||| ||||||||  ||||||     
T  31152680 agtggcaaggagctctttccaaggatgtacccagggaataccgggttcgatttcccgggggaataacgcttggtcagtgcgcgtgcctctacacacgagt 31152779  T
Q  215 cgaattattcgcccaccattggtg 238  Q
    | ||||| ||| ||||| ||||||    
T  31152780 caaattagtcgtccacctttggtg 31152803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Complemental strand, 2981075 - 2980977
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    |||||||||  |||| ||||| ||| ||||||||||||||| ||||| |||| |||  ||||||||| ||||||  ||| ||||||||||| |||||||    
T  2981075 agtggcaaggagctccttccagggacgtatccggggaatactgggttcgattcccagcgggaacaacacttggccagtgtgcatgcctctacgcacgag 2980977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 18649485 - 18649380
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||||| || ||||| |||||| ||||| ||  |||||||||||||| |  ||||||||||||||| | |||||||  |||| |||    
T  18649485 gctccttccaaggacgtatctggagaatatcgggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgtacgagccagattaatcg 18649386  T
Q  226 cccacc 231  Q
    ||||||    
T  18649385 cccacc 18649380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 34719742 - 34719867
Alignment:
Q  117 tggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 216  Q
    |||||||  |||| ||||||||| ||| | ||||||||| ||||| |||| |||  ||||| |||||||| |  ||||||||||||||| ||||||| |     
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtca 34719841  T
Q  217 aattattcgcccaccattggtgggtc 242  Q
     |||| |||| |||| ||||||||||    
T  34719842 gattagtcgctcacctttggtgggtc 34719867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 15465940 - 15466056
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcg 225  Q
    |||| ||||||||| ||||  |||||||||| |||| ||||||||  |||||||||||||||   |||| |||||||||| ||||||| |  |||  |||    
T  15465940 gctccttccaaggacgtatttggggaataccaggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcg 15466039  T
Q  226 cccaccattggtgggtc 242  Q
    | |||| ||||||||||    
T  15466040 ctcacctttggtgggtc 15466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 47313026 - 47312943
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||| ||||| |||||||||||||||||| |||| | |||||||||| |||||  ||||| ||||||||| ||| |||||    
T  47313026 ttccaaggacgtatctggggaataccgggtttga-ttcctaggggaacaacgtttggccagtgcgtatgcctctacgcatgagcc 47312943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 6563402 - 6563505
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||||||| |||  ||| |||||||| |||| | |  ||||||||||||||||  |||| |||| ||||| |||||    
T  6563402 tccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcacg 6563501  T
Q  212 agcc 215  Q
    ||||    
T  6563502 agcc 6563505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 12744651 - 12744540
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||||| | |||||| | | || ||||| ||  |||||||||||||| || ||||||||| ||||| ||| ||||||||||| |||| |||    
T  12744651 ttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcac 12744552  T
Q  231 cattggtgggtc 242  Q
      ||||||||||    
T  12744551 tgttggtgggtc 12744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 12755641 - 12755530
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||| ||||| | |||||| | | || ||||| ||  |||||||||||||| || ||||||||| ||||| ||| ||||||||||| |||| |||    
T  12755641 ttccaaggacgtatctgaggaatatcagattcgattttcagggggaacaacgcttgactagtgcgcatgtctctacgcatgagccgaattagtcgctcac 12755542  T
Q  231 cattggtgggtc 242  Q
      ||||||||||    
T  12755541 tgttggtgggtc 12755530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 16263528 - 16263599
Alignment:
Q  134 caaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    |||||| ||||| |||||||||| |||| ||||||||   |||||||||||||||  |||||||||||||||    
T  16263528 caaggacgtatctggggaataccaggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctcta 16263599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 45536688 - 45536767
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcac 210  Q
    |||||| || ||| |||| |||||||||||| |||||| || ||||||||||||||||  |||| |||||||||| ||||    
T  45536688 ttccaatgacgtacccggagaataccgggttcgatttctaaggggaacaacgcttggccagtgcacatgcctctacgcac 45536767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 32151069 - 32150939
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||| || | || |||||| | |||| ||||||||  |||||||||  ||||   |||||||||||| || ||| |    
T  32151069 tccagtggcaaggagctccttccaaggacgttttcgaggaatatcaggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatg 32150970  T
Q  212 agccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| |||| |||| ||| ||||||    
T  32150969 agccgaattagtcgctcacctttgatgggtc 32150939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 16956432 - 16956557
Alignment:
Q  117 tggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccg 216  Q
    |||||||  |||| ||||||||| ||| ||||||||||||| ||| | ||  ||  || ||||||| ||| |  ||||||||||||||| ||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccgtgttcggttctcaggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccg 16956531  T
Q  217 aattattcgcccaccattggtgggtc 242  Q
     |||| || | |||| ||||||||||    
T  16956532 gattagtcactcacctttggtgggtc 16956557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 13262063 - 13262167
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||||||||||  ||||||||||||||| ||||||||  | |||||||| ||||    | |||||| ||||| ||||||| || |||| ||| ||||    
T  13262063 ttccaaggatgtatatggggaataccgggttcgatttccagggagaacaacgtttggtcaatacgcatgtctctacgcacgagtcggattagtcgtccac 13262162  T
Q  231 cattg 235  Q
    |||||    
T  13262163 cattg 13262167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 114 - 242
Target Start/End: Complemental strand, 45362027 - 45361899
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  |||| ||||||||| ||| || |||||||||||||| ||||  ||   |||||||||||||||  ||||||||||| ||| |||  ||    
T  45362027 cagtggcaaggagctccttccaaggacgtaccctgggaataccgggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataag 45361928  T
Q  214 ccgaattattcgcccaccattggtgggtc 242  Q
    ||| |||| |||  |||| || |||||||    
T  45361927 ccggattagtcgttcacctttagtgggtc 45361899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 230
Target Start/End: Original strand, 34697300 - 34697414
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||  | |||| ||||||||||| |||| ||||   |  ||||||||| ||||||| ||| ||||||||||| ||| |||||    
T  34697300 gtggcaaggagctccttccaaaaacgtattcggggaataccaggttcgattcttagggggaacaacacttggctagtgtgcatgcctctacgcatgagcc 34697399  T
Q  216 gaattattcgcccac 230  Q
    | |||| ||||||||    
T  34697400 ggattagtcgcccac 34697414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 221
Target Start/End: Original strand, 32832 - 32941
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||||||||||   |||| ||||||||| ||| | |||||||| |||||  |||| |||   ||||||||||||||   |||| |||||||||| ||| |    
T  32832 tccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggtccgattcccaggaggaacaacgcttggtcagtgcacatgcctctacgcatg 32931  T
Q  212 agccgaatta 221  Q
    ||||||||||    
T  32932 agccgaatta 32941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 215
Target Start/End: Original strand, 34877953 - 34878054
Alignment:
Q  114 cagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgag 213  Q
    ||||||||||  || | ||||||||| |||| ||||||||||| |||| |||| | |   |||||||| ||||||  |||||||||||||||  ||||||    
T  34877953 cagtggcaaggagcaccttccaaggacgtattcggggaataccaggttcgattcctaggcggaacaacacttggccagtgcgcatgcctctacacacgag 34878052  T
Q  214 cc 215  Q
    ||    
T  34878053 cc 34878054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 459 - 536
Target Start/End: Original strand, 47895811 - 47895888
Alignment:
Q  459 aagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagag 536  Q
    |||||| ||||||||||||||| ||| ||  |||| |||||| ||| ||||||| |||| ||||||||| ||| ||||    
T  47895811 aagtaggtaaagattatgatgaattagttgtattagatatttaagatgtgagtcgtcatattctaaaaggatcgagag 47895888  T

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Target: scaffold0006 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 68483 - 68607
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||  |||| ||||||||| ||| ||||| |||| |||||| |||| |||  |||||||||||||||   ||||||||||||||| ||||||||    
T  68483 agtggcaaggagctccttccaaggacgtacccgggaaatatcgggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagc 68579  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| ||||||||| ||||||||||    
T  68580 cggattagtcgcccacctttggtgggtc 68607  T

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Target: scaffold0010 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 173 - 242
Target Start/End: Complemental strand, 155796 - 155727
Alignment:
Q  173 gggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||| ||||||||||    
T  155796 gggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 155727  T

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Target: scaffold0004 (Bit Score: 48; Significance: 7e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 7961 - 7854
Alignment:
Q  132 tccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccacc 231  Q
    |||||||| ||| |||||||||||||||||||||| |||| ||||| ||| ||||||  ||||||||||||||| |||  ||| | |||| |||||||||    
T  7961 tccaaggacgtacccggggaataccgggtttgattcccaaggggaaaaacacttggccagtgcgcatgcctctacgcattagctggattagtcgcccacc 7862  T
Q  232 attggtgg 239  Q
     |||||||    
T  7861 tttggtgg 7854  T

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Target: scaffold0004; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 242
Target Start/End: Complemental strand, 95125 - 94996
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    |||| |||||||  |||| ||||||| | |||||||||||||||| |||| ||||||   ||| ||||||| ||| |  |||||||||||| || ||| |    
T  95125 tccaatggcaaggagctccttccaagaaagtatccggggaataccaggttcgatttc--taggaaacaacgtttgaccagtgcgcatgcctttacgcatg 95028  T
Q  212 agccgaattattcgcccacca-ttggtgggtc 242  Q
    ||||| |||| |||||||||| ||||||||||    
T  95027 agccggattagtcgcccaccatttggtgggtc 94996  T

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Target: scaffold0291 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 145 - 242
Target Start/End: Original strand, 6851 - 6948
Alignment:
Q  145 ccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||||||| |||| |||  ||||||||| ||||||  ||||||||||||||| ||| |||||| |||| |||| |||| ||||||||||    
T  6851 ccggggaataccgggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtc 6948  T

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Target: scaffold0384 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 5934 - 6065
Alignment:
Q  110 gttccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgca 209  Q
    |||| |||||||||  |||| || |||||  ||| ||||||||||| ||||| ||||||||  |||| |||||||||||  |||| |||||||||| |||    
T  5934 gttctagtggcaaggagctcctttcaagggcgtacccggggaatactgggttcgatttccaggggga-caacgcttggccagtgcacatgcctctacgca 6032  T
Q  210 cgagccgaattattcgcccaccattggtgggtc 242  Q
     ||| ||||||| ||| ||||||||||||||||    
T  6033 tgagacgaattagtcgtccaccattggtgggtc 6065  T

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Target: scaffold0376 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 242
Target Start/End: Original strand, 12636 - 12763
Alignment:
Q  115 agtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagc 214  Q
    |||||||||| |||| ||||||||| ||  ||||||||||||||||| ||||   |   |||||||||||||||  ||| ||||||||||| |||||| |    
T  12636 agtggcaagaagctccttccaaggacgtgcccggggaataccgggttcgattcagaggaggaacaacgcttggccagtgtgcatgcctctacgcacgaac 12735  T
Q  215 cgaattattcgcccaccattggtgggtc 242  Q
    || |||| ||||||||| ||| ||||||    
T  12736 cggattagtcgcccacctttgatgggtc 12763  T

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Target: scaffold0316 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 147 - 242
Target Start/End: Complemental strand, 1725 - 1630
Alignment:
Q  147 ggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    |||||||||| |||| ||||||||  |||||||||| || ||  ||||||||||||||| ||| ||||| ||||| ||||||||| ||||||||||    
T  1725 ggggaataccaggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtc 1630  T

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Target: scaffold0079 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 8152 - 8230
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctcta 205  Q
    |||| ||||||||| ||| ||||||||||||||||| |||| |||| ||||||||||||||||  |||||||||||||||    
T  8152 gctccttccaaggacgtacccggggaataccgggttcgattcccaa-gggaacaacgcttggccagtgcgcatgcctcta 8230  T

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Target: scaffold0012 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 177463 - 177546
Alignment:
Q  459 aagtagataaagattatgatgagttaattacattatatattttagaggtgagtcatcatgttctaaaagaatctagagagatct 542  Q
    |||||| |||||||||||||||||| |||  |||| |||||||||| ||||||||| || ||||||||| | ||||||||||||    
T  177463 aagtaggtaaagattatgatgagtttattgtattagatattttagatgtgagtcatgattttctaaaaggacctagagagatct 177546  T

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Target: scaffold0086 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 26181 - 26269
Alignment:
Q  147 ggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattg 235  Q
    ||||||||| ||||| ||||||||  ||||||||||||||||  ||| ||||||||||| |||||||||| |||| ||| |||| ||||    
T  26181 ggggaatactgggttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacgcacgagccggattagtcgtccacaattg 26269  T

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Target: scaffold0262 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 372 - 426
Target Start/End: Complemental strand, 5559 - 5505
Alignment:
Q  372 tttaactaccaccttgaggacaaggtgtttgtgtaagaccaatggaatgtaatga 426  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||||| |||||||||    
T  5559 tttaattaccaccttaaggacaaggtgtttgtgcaagaccaatgggatgtaatga 5505  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 72610 - 72686
Alignment:
Q  126 gctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctc 203  Q
    |||| ||||||||| ||||| ||| ||||||||||| ||||||||| |||||||||||||| |  |||||||||||||    
T  72610 gctccttccaaggacgtatcaggg-aataccgggttcgatttccaaggggaacaacgcttgaccagtgcgcatgcctc 72686  T

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Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 242
Target Start/End: Complemental strand, 8810 - 8717
Alignment:
Q  149 ggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccaccattggtgggtc 242  Q
    ||||||||||||| |||| |||  ||||||||||||||||  |||||| |||||||| ||| |||| | |||| ||| ||||| ||||||||||    
T  8810 ggaataccgggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 8717  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 229
Target Start/End: Complemental strand, 271216 - 271103
Alignment:
Q  116 gtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagcc 215  Q
    ||||||||  |||| ||||||||| ||| |||| ||||| |||||| |||| |||  |||||||||||||||   ||||||||| ||||| |||||||||    
T  271216 gtggcaaggagctccttccaaggacgtacccggagaatatcgggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgcacgagcc 271117  T
Q  216 gaattattcgccca 229  Q
    |  ||| |||||||    
T  271116 gggttagtcgccca 271103  T

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Target: scaffold0341 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 215
Target Start/End: Original strand, 18595 - 18698
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||||||||||| |||  ||| |||||||| |||| | |  ||||||||||||||||  |||| |||| ||||| |||||    
T  18595 tccagtggcaaggagctccttccaaggatgtacccgaagaacaccgggttcgattcctagggggaacaacgcttggccagtgcacatgtctctacgcacg 18694  T
Q  212 agcc 215  Q
    ||||    
T  18695 agcc 18698  T

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Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 238
Target Start/End: Original strand, 41007 - 41133
Alignment:
Q  112 tccagtggcaagatgctcattccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacg 211  Q
    ||||||||||||  |||| ||||| ||| |||  | ||||||| |||||| ||||  ||| ||||||||| |||||   ||| ||||||||||| |||||    
T  41007 tccagtggcaaggagctccttccatggacgtactcagggaatatcgggttcgattctcaaggggaacaacacttggtcagtgtgcatgcctctacgcacg 41106  T
Q  212 agccgaattattcgcccaccattggtg 238  Q
    ||||| |||| ||||||| | ||||||    
T  41107 agccggattagtcgcccatctttggtg 41133  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 42959 - 42848
Alignment:
Q  131 ttccaaggatgtatccggggaataccgggtttgatttccaaagggaacaacgcttggcttgtgcgcatgcctctatgcacgagccgaattattcgcccac 230  Q
    ||||||| ||||| | |||||||| |||||| |||| | |  | |||||| ||||||   |||||||||||||||  || |||||| |||| ||||||||    
T  42959 ttccaagaatgtacctggggaatatcgggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccac 42860  T
Q  231 cattggtgggtc 242  Q
    | ||||||||||    
T  42859 ctttggtgggtc 42848  T

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