View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4982_high_15 (Length: 220)

Name: NF4982_high_15
Description: NF4982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4982_high_15
NF4982_high_15
[»] chr7 (45 HSPs)
chr7 (3-113)||(39145866-39145976)
chr7 (3-113)||(9681119-9681230)
chr7 (3-113)||(9679358-9679469)
chr7 (3-113)||(22251465-22251575)
chr7 (3-113)||(21990449-21990560)
chr7 (3-113)||(21592024-21592133)
chr7 (15-113)||(42330881-42330979)
chr7 (20-113)||(42223472-42223565)
chr7 (3-85)||(26804809-26804892)
chr7 (3-113)||(27306111-27306222)
chr7 (3-113)||(31434928-31435036)
chr7 (1-77)||(11355555-11355632)
chr7 (20-113)||(37412002-37412095)
chr7 (3-113)||(44724878-44724987)
chr7 (3-77)||(21680329-21680401)
chr7 (24-94)||(26295764-26295832)
chr7 (3-85)||(443895-443979)
chr7 (25-113)||(7351526-7351612)
chr7 (3-78)||(13099387-13099464)
chr7 (30-91)||(21678388-21678449)
chr7 (25-113)||(28487881-28487967)
chr7 (25-113)||(48457981-48458067)
chr7 (30-113)||(1850314-1850395)
chr7 (3-85)||(4295844-4295924)
chr7 (25-113)||(7471855-7471941)
chr7 (25-113)||(9027068-9027154)
chr7 (25-113)||(11759455-11759541)
chr7 (25-113)||(20297690-20297776)
chr7 (25-113)||(25542856-25542942)
chr7 (25-113)||(38394314-38394400)
chr7 (30-110)||(43253394-43253472)
chr7 (2-61)||(6046792-6046848)
chr7 (30-113)||(20299793-20299874)
chr7 (3-110)||(24465833-24465937)
chr7 (30-113)||(40946663-40946744)
chr7 (35-113)||(7349152-7349228)
chr7 (3-61)||(24813432-24813488)
chr7 (25-113)||(1606707-1606793)
chr7 (20-112)||(7188853-7188942)
chr7 (25-113)||(18345869-18345955)
chr7 (25-113)||(40836618-40836704)
chr7 (30-113)||(35962-36043)
chr7 (25-92)||(3036052-3036117)
chr7 (3-51)||(20091100-20091147)
chr7 (30-113)||(38396972-38397053)
[»] chr5 (48 HSPs)
chr5 (3-113)||(6756781-6756891)
chr5 (3-113)||(2724182-2724292)
chr5 (3-77)||(24127145-24127219)
chr5 (3-113)||(41585615-41585725)
chr5 (1-113)||(26098166-26098280)
chr5 (3-113)||(10474203-10474313)
chr5 (3-85)||(25904392-25904474)
chr5 (5-110)||(31465871-31465977)
chr5 (20-113)||(36208879-36208972)
chr5 (4-85)||(37705690-37705771)
chr5 (8-91)||(12555815-12555898)
chr5 (3-110)||(26098020-26098127)
chr5 (3-113)||(1189487-1189597)
chr5 (3-113)||(17818370-17818482)
chr5 (3-78)||(18509232-18509308)
chr5 (33-113)||(34530594-34530674)
chr5 (3-113)||(18511091-18511202)
chr5 (3-76)||(16092116-16092189)
chr5 (20-93)||(20045292-20045365)
chr5 (30-110)||(17073203-17073283)
chr5 (3-78)||(20043279-20043353)
chr5 (18-85)||(40221833-40221900)
chr5 (18-113)||(21948336-21948433)
chr5 (20-113)||(21289065-21289158)
chr5 (20-78)||(18596951-18597009)
chr5 (25-113)||(2175219-2175305)
chr5 (3-110)||(2954705-2954811)
chr5 (10-113)||(6747601-6747708)
chr5 (17-78)||(39397920-39397981)
chr5 (3-113)||(39854772-39854886)
chr5 (30-113)||(16776477-16776559)
chr5 (3-112)||(20054126-20054231)
chr5 (20-113)||(20505722-20505818)
chr5 (24-113)||(38960006-38960093)
chr5 (25-113)||(18467002-18467088)
chr5 (25-113)||(21684327-21684413)
chr5 (25-113)||(25804342-25804428)
chr5 (25-113)||(38882406-38882492)
chr5 (3-73)||(2818253-2818325)
chr5 (30-77)||(6745386-6745433)
chr5 (32-113)||(31179247-31179326)
chr5 (25-110)||(39798348-39798431)
chr5 (25-113)||(4236946-4237032)
chr5 (25-113)||(10587133-10587218)
chr5 (25-113)||(18469327-18469413)
chr5 (25-113)||(25921348-25921434)
chr5 (25-113)||(27912854-27912940)
chr5 (3-113)||(36402205-36402318)
[»] scaffold0131 (1 HSPs)
scaffold0131 (3-113)||(14264-14374)
[»] chr8 (32 HSPs)
chr8 (3-113)||(14808106-14808216)
chr8 (3-113)||(33541290-33541400)
chr8 (3-113)||(14419070-14419180)
chr8 (3-113)||(37214144-37214254)
chr8 (3-113)||(15073056-15073167)
chr8 (3-110)||(30480386-30480493)
chr8 (20-113)||(36865901-36865994)
chr8 (3-113)||(41383007-41383119)
chr8 (3-78)||(181824-181897)
chr8 (3-113)||(25952866-25952975)
chr8 (3-113)||(35872336-35872443)
chr8 (30-113)||(15068354-15068437)
chr8 (18-113)||(27911439-27911532)
chr8 (18-113)||(27957858-27957951)
chr8 (3-113)||(14477596-14477705)
chr8 (25-113)||(43079976-43080062)
chr8 (25-113)||(43082347-43082433)
chr8 (25-113)||(44721217-44721303)
chr8 (3-62)||(1225512-1225569)
chr8 (30-113)||(13858369-13858450)
chr8 (25-113)||(15809592-15809678)
chr8 (25-113)||(27827359-27827445)
chr8 (25-113)||(28283096-28283182)
chr8 (20-112)||(31162574-31162664)
chr8 (3-113)||(28251445-28251557)
chr8 (3-92)||(41385089-41385181)
chr8 (30-113)||(43530494-43530575)
chr8 (25-113)||(32339683-32339770)
chr8 (25-113)||(3874367-3874453)
chr8 (25-113)||(3883470-3883556)
chr8 (25-113)||(27829670-27829756)
chr8 (20-61)||(31578216-31578256)
[»] chr4 (56 HSPs)
chr4 (3-113)||(6133180-6133290)
chr4 (3-113)||(13547497-13547608)
chr4 (3-113)||(36919464-36919574)
chr4 (3-91)||(2891635-2891723)
chr4 (16-113)||(14787309-14787406)
chr4 (16-113)||(14789308-14789405)
chr4 (3-113)||(36921373-36921483)
chr4 (20-113)||(49088916-49089009)
chr4 (18-85)||(27499406-27499473)
chr4 (3-113)||(40091295-40091405)
chr4 (3-113)||(16453653-16453761)
chr4 (3-113)||(47563104-47563212)
chr4 (3-113)||(12395725-12395835)
chr4 (3-113)||(12400687-12400797)
chr4 (31-113)||(22802612-22802694)
chr4 (3-91)||(24879333-24879423)
chr4 (3-113)||(24446537-24446644)
chr4 (30-110)||(36380718-36380797)
chr4 (22-113)||(38928059-38928150)
chr4 (31-113)||(22800740-22800822)
chr4 (3-110)||(52942368-52942478)
chr4 (20-113)||(37312959-37313052)
chr4 (20-113)||(47275084-47275177)
chr4 (17-113)||(5101273-5101369)
chr4 (30-113)||(17662125-17662208)
chr4 (24-113)||(22046561-22046648)
chr4 (30-91)||(4215673-4215734)
chr4 (25-113)||(9148607-9148693)
chr4 (25-113)||(22044266-22044352)
chr4 (3-113)||(33415369-33415478)
chr4 (30-110)||(48486691-48486771)
chr4 (20-113)||(18409228-18409319)
chr4 (3-74)||(24880795-24880868)
chr4 (25-113)||(51015617-51015703)
chr4 (30-117)||(5198781-5198866)
chr4 (30-113)||(7941700-7941781)
chr4 (30-113)||(9174020-9174101)
chr4 (30-78)||(24889168-24889216)
chr4 (30-113)||(31849473-31849554)
chr4 (3-77)||(40637417-40637493)
chr4 (30-113)||(47210671-47210752)
chr4 (3-112)||(18534718-18534822)
chr4 (4-112)||(18537360-18537463)
chr4 (30-76)||(36378661-36378707)
chr4 (25-113)||(2484748-2484834)
chr4 (25-113)||(5635351-5635437)
chr4 (20-113)||(16455586-16455679)
chr4 (20-61)||(25358000-25358040)
chr4 (20-61)||(31983467-31983507)
chr4 (25-113)||(37089247-37089333)
chr4 (140-184)||(5084222-5084266)
chr4 (30-113)||(8631293-8631374)
chr4 (30-113)||(9176348-9176429)
chr4 (30-113)||(11006128-11006209)
chr4 (30-113)||(11008442-11008523)
chr4 (3-60)||(28454026-28454084)
[»] chr2 (37 HSPs)
chr2 (3-113)||(3022437-3022547)
chr2 (3-112)||(14837533-14837642)
chr2 (3-113)||(6258697-6258807)
chr2 (3-85)||(15539437-15539519)
chr2 (3-113)||(17849382-17849492)
chr2 (3-113)||(19007905-19008015)
chr2 (3-85)||(22407362-22407444)
chr2 (3-113)||(42923386-42923499)
chr2 (3-84)||(28196900-28196981)
chr2 (3-113)||(5375225-5375336)
chr2 (3-110)||(22707634-22707741)
chr2 (3-113)||(6264028-6264138)
chr2 (3-113)||(22287216-22287326)
chr2 (3-78)||(44288982-44289057)
chr2 (3-112)||(28459073-28459180)
chr2 (3-113)||(7462825-7462937)
chr2 (17-113)||(34979469-34979565)
chr2 (3-113)||(21520569-21520683)
chr2 (4-78)||(23871082-23871158)
chr2 (25-113)||(35215467-35215553)
chr2 (37-113)||(11739456-11739532)
chr2 (19-94)||(38414081-38414156)
chr2 (3-92)||(22162925-22163012)
chr2 (25-113)||(13909920-13910006)
chr2 (5-77)||(40031968-40032041)
chr2 (25-113)||(24162098-24162184)
chr2 (25-113)||(35217844-35217930)
chr2 (30-91)||(38020372-38020433)
chr2 (25-113)||(45279876-45279962)
chr2 (3-113)||(17848705-17848814)
chr2 (6-61)||(20146542-20146595)
chr2 (3-91)||(17897153-17897236)
chr2 (3-72)||(43623500-43623570)
chr2 (25-113)||(27105091-27105177)
chr2 (72-113)||(37962826-37962867)
chr2 (3-109)||(20592343-20592444)
chr2 (69-113)||(45332054-45332098)
[»] chr1 (49 HSPs)
chr1 (3-113)||(18307398-18307508)
chr1 (3-113)||(25251156-25251266)
chr1 (3-113)||(14097850-14097961)
chr1 (3-110)||(50248455-50248562)
chr1 (3-113)||(2949114-2949224)
chr1 (3-113)||(12302386-12302497)
chr1 (3-113)||(11457357-11457467)
chr1 (3-113)||(13215373-13215483)
chr1 (3-113)||(31490201-31490311)
chr1 (3-113)||(4131257-4131367)
chr1 (3-110)||(17319176-17319283)
chr1 (3-113)||(41647209-41647320)
chr1 (18-113)||(50078671-50078766)
chr1 (3-113)||(18839877-18839987)
chr1 (20-113)||(25248433-25248526)
chr1 (3-91)||(50076577-50076664)
chr1 (6-113)||(3579465-3579572)
chr1 (3-113)||(9240969-9241077)
chr1 (3-113)||(47906559-47906670)
chr1 (3-85)||(31424925-31425007)
chr1 (3-113)||(27339010-27339123)
chr1 (30-91)||(30780362-30780423)
chr1 (30-113)||(6995575-6995658)
chr1 (30-113)||(23816206-23816289)
chr1 (3-113)||(38925363-38925473)
chr1 (20-112)||(18800458-18800548)
chr1 (3-113)||(27336819-27336932)
chr1 (3-113)||(28206947-28207060)
chr1 (5-113)||(17324365-17324473)
chr1 (7-110)||(47451922-47452027)
chr1 (20-113)||(28998129-28998225)
chr1 (20-113)||(29003845-29003941)
chr1 (25-113)||(28842812-28842898)
chr1 (3-113)||(39462808-39462921)
chr1 (30-78)||(25860319-25860367)
chr1 (3-61)||(6756817-6756873)
chr1 (25-113)||(9459311-9459397)
chr1 (25-113)||(9463138-9463224)
chr1 (25-113)||(13447150-13447236)
chr1 (25-113)||(13762154-13762240)
chr1 (25-113)||(15294711-15294797)
chr1 (25-113)||(51750357-51750443)
chr1 (3-120)||(6114980-6115094)
chr1 (30-113)||(15823865-15823949)
chr1 (8-52)||(31422803-31422847)
chr1 (30-113)||(50307424-50307508)
chr1 (25-113)||(28840997-28841083)
chr1 (16-56)||(27916797-27916836)
chr1 (30-113)||(39932398-39932479)
[»] chr3 (58 HSPs)
chr3 (3-92)||(47148794-47148883)
chr3 (3-78)||(53468366-53468441)
chr3 (5-113)||(15781150-15781258)
chr3 (3-110)||(32263919-32264026)
chr3 (3-113)||(1626561-1626671)
chr3 (1-96)||(54691468-54691564)
chr3 (3-113)||(1313678-1313786)
chr3 (3-113)||(3314954-3315065)
chr3 (3-113)||(53917541-53917652)
chr3 (3-77)||(3307029-3307103)
chr3 (3-85)||(12267882-12267963)
chr3 (25-113)||(3859808-3859895)
chr3 (3-91)||(5926666-5926753)
chr3 (3-110)||(4666783-4666890)
chr3 (17-91)||(6484641-6484716)
chr3 (3-78)||(28181273-28181348)
chr3 (20-91)||(48361568-48361639)
chr3 (3-85)||(53915401-53915484)
chr3 (20-113)||(27635533-27635626)
chr3 (3-91)||(6232069-6232156)
chr3 (3-113)||(41849328-41849437)
chr3 (3-110)||(43423346-43423451)
chr3 (3-113)||(880120-880228)
chr3 (3-77)||(39715734-39715809)
chr3 (20-110)||(53591469-53591559)
chr3 (3-113)||(32219354-32219467)
chr3 (20-113)||(51943659-51943752)
chr3 (3-113)||(18096775-18096888)
chr3 (3-85)||(43421323-43421403)
chr3 (30-113)||(45883239-45883322)
chr3 (3-66)||(51674691-51674754)
chr3 (30-96)||(8183031-8183097)
chr3 (30-110)||(18162961-18163042)
chr3 (30-113)||(24980007-24980091)
chr3 (3-113)||(36012096-36012208)
chr3 (3-113)||(43228560-43228671)
chr3 (20-96)||(47701569-47701645)
chr3 (3-53)||(28101940-28101990)
chr3 (3-78)||(4308192-4308269)
chr3 (25-113)||(10955900-10955986)
chr3 (3-90)||(880354-880439)
chr3 (30-113)||(5191954-5192035)
chr3 (30-113)||(18099045-18099129)
chr3 (3-113)||(25688035-25688148)
chr3 (25-113)||(6063317-6063404)
chr3 (25-113)||(6065667-6065754)
chr3 (3-83)||(27101087-27101169)
chr3 (25-113)||(456206-456292)
chr3 (25-113)||(458583-458669)
chr3 (25-113)||(1321777-1321863)
chr3 (25-113)||(10084262-10084348)
chr3 (25-113)||(10191185-10191271)
chr3 (25-113)||(10958196-10958282)
chr3 (3-113)||(43226352-43226461)
chr3 (25-113)||(50494297-50494383)
chr3 (10-113)||(9604481-9604585)
chr3 (25-113)||(10621400-10621488)
chr3 (20-111)||(28761324-28761412)
[»] chr6 (25 HSPs)
chr6 (3-113)||(15346670-15346778)
chr6 (115-200)||(27612711-27612796)
chr6 (3-113)||(3631819-3631929)
chr6 (1-85)||(1069626-1069710)
chr6 (3-113)||(30728704-30728814)
chr6 (3-113)||(15367355-15367463)
chr6 (7-77)||(3394695-3394765)
chr6 (20-110)||(25480219-25480309)
chr6 (20-113)||(24338330-24338423)
chr6 (3-113)||(3629746-3629855)
chr6 (3-110)||(3233605-3233715)
chr6 (3-61)||(32280321-32280379)
chr6 (3-113)||(9020250-9020363)
chr6 (3-113)||(11982906-11983019)
chr6 (3-53)||(12161498-12161548)
chr6 (25-113)||(28241196-28241282)
chr6 (30-113)||(4816105-4816186)
chr6 (25-113)||(14507051-14507137)
chr6 (142-201)||(27692245-27692304)
chr6 (3-56)||(3027791-3027842)
chr6 (3-61)||(12937128-12937184)
chr6 (25-113)||(1230123-1230210)
chr6 (3-66)||(12186000-12186061)
chr6 (30-117)||(20915227-20915312)
chr6 (30-113)||(26932437-26932518)
[»] scaffold0005 (2 HSPs)
scaffold0005 (16-113)||(50325-50422)
scaffold0005 (16-113)||(52324-52421)
[»] scaffold0045 (1 HSPs)
scaffold0045 (3-73)||(85529-85597)
[»] scaffold0339 (1 HSPs)
scaffold0339 (20-113)||(4309-4402)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-113)||(35892-36004)
[»] scaffold0038 (1 HSPs)
scaffold0038 (25-113)||(41358-41444)
[»] scaffold0031 (1 HSPs)
scaffold0031 (30-113)||(79512-79596)
[»] scaffold0068 (1 HSPs)
scaffold0068 (25-113)||(29497-29583)
[»] scaffold0370 (1 HSPs)
scaffold0370 (30-113)||(1327-1408)
[»] scaffold0154 (1 HSPs)
scaffold0154 (3-113)||(11349-11463)
[»] scaffold0004 (1 HSPs)
scaffold0004 (6-113)||(80160-80270)
[»] scaffold1674 (1 HSPs)
scaffold1674 (25-113)||(1326-1412)
[»] scaffold0468 (1 HSPs)
scaffold0468 (3-56)||(1580-1632)
[»] scaffold0127 (1 HSPs)
scaffold0127 (33-113)||(12749-12827)


Alignment Details
Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 39145976 - 39145866
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||| ||| | ||||||||| |||||| ||||||||||| || |    
T  39145976 tgttctctcttcctttctctctcgttgttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgattatcacttactcca 39145877  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  39145876 cacatcaagtt 39145866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 9681119 - 9681230
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||  |||||||||||| |||     
T  9681119 tgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttcc 9681218  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  9681219 acacatcaagtt 9681230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 9679358 - 9679469
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||| ||||| |||| | ||||||||||  ||     
T  9679358 tgttatctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctcc 9679457  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  9679458 acacatcaagtt 9679469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 22251575 - 22251465
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||| ||||||||||||||| | | ||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| || |||||| |||  || |    
T  22251575 tgttctatcttcctttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgattatcccttgctcaa 22251476  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  22251475 cacatcaagtt 22251465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 21990449 - 21990560
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||||| | ||| ||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||  ||     
T  21990449 tgttctctcttcctttctctctcgctgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctcc 21990548  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  21990549 acacatcaagtt 21990560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 21592133 - 21592024
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||| ||||| |||  | ||||||||||  || |    
T  21592133 tgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttgtctgattatcacttgctcca 21592035  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  21592034 cacatcaagtt 21592024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 42330979 - 42330881
Alignment:
Q  15 ctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| ||||||  ||  || ||||||||||||    
T  42330979 ctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtt 42330881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 42223472 - 42223565
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||| || ||||||||||||| ||||||||||||||||||| ||| ||||| ||||| |||||| |||||| |||| || ||||||||||||    
T  42223472 tctctcattgttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgattatcccttactccacacatcaagtt 42223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 26804809 - 26804892
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  26804809 tgttctctcttcttttctctcgatgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgctt 26804892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 27306222 - 27306111
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| | ||| |||||| |||||| |||||| ||||||||||| |||| ||||||||||| |||||| | |||| ||| |||     
T  27306222 tgttctctcttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttgactatcccttgttcc 27306123  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  27306122 acacatcaagtt 27306111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 31435036 - 31434928
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||||||||||||| | || ||||| |||||||||||| |||||  |||  || |    
T  31435036 tgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgattattccttgctcca 31434939  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  31434938 cacatcaagtt 31434928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 11355555 - 11355632
Alignment:
Q  1 tatgttctctcttcctt-tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    ||||||||||||| ||| ||||||| ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  11355555 tatgttctctcttacttctctctcttgttgttttctacttttggcttgtgtttataattgttccatacactttgtttt 11355632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 37412095 - 37412002
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||| ||||| |||||| ||||||||||| |||| ||||||||||| |||||| |||||  ||| ||| ||||||||||||    
T  37412095 tctctcgttgttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgattattccttgttccacacatcaagtt 37412002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 44724878 - 44724987
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataat-tgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||||||||| |||| |||| ||||||||||| |||||| | |||| |||  ||     
T  44724878 tgttctctcttcatttctctc--gttgttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttgactatcccttgctcc 44724975  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  44724976 acacatcaagtt 44724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 21680329 - 21680401
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  21680329 tgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgttccatacactttgtttt 21680401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 26295764 - 26295832
Alignment:
Q  24 tcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcac 94  Q
    ||||| ||||||||||||| ||||||||||||||  ||||||| |||||||||||||||||| ||||||||    
T  26295764 tcgttgttttctacttttggcttgtgtttataat--tttcatacactttgttttgattgcttgattatcac 26295832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 443895 - 443979
Alignment:
Q  3 tgttctctcttcctttctctctc--gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||||||||||||||  | | ||||||||||||| |||||| |||||||||||  ||| ||||||||||| ||||||    
T  443895 tgttctctcttcctttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttgttttggttgctt 443979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 7351612 - 7351526
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| ||||||||||||| |||| || ||||||||||||    
T  7351612 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttaattatcccttactccacacatcaagtt 7351526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 13099464 - 13099387
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  13099464 tgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttg 13099387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 21678388 - 21678449
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||||||||| |||||||||||||||||| | || ||||||||||| |||||| |||||    
T  21678388 ttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgattat 21678449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 28487881 - 28487967
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  28487881 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 28487967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 48457981 - 48458067
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  48457981 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 48458067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 1850314 - 1850395
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  ||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  1850314 ttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 1850395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 4295924 - 4295844
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| |||||||| |   |||||||||||||| ||||||||||| ||||||  ||| ||||||||||| ||||||    
T  4295924 tgttctctcttcttttctctcgcc--attttctacttttggcttgtgtttattattgttctatacactttgttttggttgctt 4295844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 7471941 - 7471855
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  7471941 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 7471855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 9027154 - 9027068
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  9027154 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 9027068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 11759455 - 11759541
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  11759455 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 11759541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 20297690 - 20297776
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  20297690 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 20297776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 25542856 - 25542942
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| | |||||||||||||||| |||||| |||  || ||||||||||||    
T  25542856 cgttgttttctacttttggcttgtattta--attgttccatacattttgttttgattgcttgattatcccttgctccacacatcaagtt 25542942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 38394314 - 38394400
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  38394314 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 38394400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 110
Target Start/End: Complemental strand, 43253472 - 43253394
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || |||||||||    
T  43253472 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaa 43253394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 6046792 - 6046848
Alignment:
Q  2 atgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||||||||  |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  6046792 atgttctctct--ctttttctctcgtttttttctacttttg-cttgtgtttataattgtt 6046848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 20299793 - 20299874
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  20299793 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 20299874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 24465833 - 24465937
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| |||| ||||||| | |||||||||||||  ||||| |||||| |  | |||| ||||||||||| |||||| | |||||||| ||| |    
T  24465833 tgttctctctttcttt-tctctcgctgttttctacttttggtttgtgattataact--tccatacactttgttttggttgcttgaatatcacttgttcca 24465929  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  24465930 cacatcaa 24465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 40946663 - 40946744
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| ||||| ||||| ||||  ||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  40946663 ttttctatttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 40946744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 7349228 - 7349152
Alignment:
Q  35 tacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||| ||||| ||||||| |  |||||| ||||| ||||| ||||||||||||| |||| || ||||||||||||    
T  7349228 tacttttggcttgtatttataact--ttcatacactttattttggttgcttaattatcccttactccacacatcaagtt 7349152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 24813488 - 24813432
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||||||||||||| ||||||||| |||||||||||||  || ||||||||||||||    
T  24813488 tgttctctcttccttt-tctctcgttgttttctacttttg-tttatgtttataattgtt 24813432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 1606707 - 1606793
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||| || ||||  |||||||||| ||||||||||||| |||  || ||||||||||||    
T  1606707 cgttgttttctacttttggcttgtattta--attattccatacgctttgttttggttgcttaattatcccttgctccacacatcaagtt 1606793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 7188853 - 7188942
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagt 112  Q
    ||||||| | ||||||||||||| ||||||||||||| |  | |||| ||||||||||| |||||| ||||| ||||  || |||||||||||    
T  7188853 tctctcgctgttttctacttttg-cttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctccacacatcaagt 7188942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 18345869 - 18345955
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  18345869 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 18345955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 40836704 - 40836618
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| ||| || |||||| |||  || ||||||||||||    
T  40836704 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgtttgattatcccttgctccacacatcaagtt 40836618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 35962 - 36043
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||||  |||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  35962 ttttctacttttggtttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 36043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 92
Target Start/End: Original strand, 3036052 - 3036117
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatc 92  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| ||||||    
T  3036052 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatc 3036117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 20091147 - 20091100
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtt 51  Q
    ||||||||||| |||| ||||||||| |||||||||||| |||||||||    
T  20091147 tgttctctctttctttttctctcgttgttttctactttt-acttgtgtt 20091100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 38396972 - 38397053
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  ||||||  ||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  38396972 ttttctacttttggcttgtattta--attgttctatacactttgttttggttgctttattatcccttgctccacacatcaagtt 38397053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 6756781 - 6756891
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| | ||||||||||  || |    
T  6756781 tgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgattatcacttgctcca 6756880  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  6756881 cacatcaagtt 6756891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 2724182 - 2724292
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||| ||| ||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| |||  | ||    
T  2724182 tgttctctcttcctttttctttcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctata 2724281  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  2724282 cacatcaagtt 2724292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 24127145 - 24127219
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  24127145 tgttctctctttctttctctctcgttgttttctacttttgacttatgtttataattgtttcatacactttgtttt 24127219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 41585725 - 41585615
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| |||   | |    
T  41585725 tgttctatcttcttttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgcccca 41585626  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  41585625 cacatcaagtt 41585615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26098280 - 26098166
Alignment:
Q  1 tatgttctctcttcctttctctctc--gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttat 98  Q
    |||||||||||||||||||||||||  | | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||  |||      
T  26098280 tatgttctctcttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgc 26098181  T
Q  99 tctacacatcaagtt 113  Q
    || ||||||||||||    
T  26098180 tccacacatcaagtt 26098166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 10474313 - 10474203
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| || |||||||||||  |||||||||||||||||| |||| ||||||||||| || ||| |||||  |||  || |    
T  10474313 tgttctctcttcctttctctctcgctaatttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgattattccttgctcca 10474214  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  10474213 cacatcaagtt 10474203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 25904392 - 25904474
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||||||||||||||| | |||||||||||||  ||||||||||||||||| |||| |||||||||| |||||||    
T  25904392 tgttctctcttcctttctctctcgctgttttctacttttggtttgtgtttataattgttccatacactttgttttcattgctt 25904474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 31465977 - 31465871
Alignment:
Q  5 ttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctac 103  Q
    |||||||||| ||||||||||| | ||||||||||||| |||||||||||||||||| |||| |||||| ||||| ||||||||||||  ||| ||| ||    
T  31465977 ttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccac 31465878  T
Q  104 acatcaa 110  Q
    |||||||    
T  31465877 acatcaa 31465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 36208879 - 36208972
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| |||||| |||||||||||  ||| ||||||||||| |||||| ||||||||||  |||||||||||||||    
T  36208879 tctctcgttgttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgattatcacttgctctacacatcaagtt 36208972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 37705771 - 37705690
Alignment:
Q  4 gttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    ||||||||||||||||||||||| | ||||||||||||| ||||||||| ||||| || |||||||||||||||| ||||||    
T  37705771 gttctctcttcctttctctctcgctgttttctacttttggcttgtgtttttaattattccatatactttgttttggttgctt 37705690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 12555898 - 12555815
Alignment:
Q  8 tctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||| ||||| |||||| |||||    
T  12555898 tctcttcttttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgattat 12555815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 26098020 - 26098127
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||| ||||| | ||||||||||||| || ||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || |    
T  26098020 tgttctctcttcctttctatctcgctgttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcca 26098119  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  26098120 cacatcaa 26098127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 1189597 - 1189487
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||||||||||||||||   ||||||||||||| |||||||||||||||||| |||| | ||||||||| | |||| |||||  |||  || |    
T  1189597 tgttctctcttcctttctctctcgcagttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgattattccttgctcca 1189498  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  1189497 cacatcaagtt 1189487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 17818482 - 17818370
Alignment:
Q  3 tgttctctcttcctttctctctc--gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||| ||||||||||||||  | | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||  |||  ||    
T  17818482 tgttctcttttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctc 17818383  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  17818382 cacacatcaagtt 17818370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 18509308 - 18509232
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||| |||||||| | ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  18509308 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttg 18509232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 34530674 - 34530594
Alignment:
Q  33 tctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||| |||||| ||||||||||  || ||||||||||||    
T  34530674 tctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacacatcaagtt 34530594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 18511202 - 18511091
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| | ||| ||||||||||||  ||||||||||||||||||||||| ||||||||||  |||||| | |||| |||  ||     
T  18511202 tgttctctcttcttttctctcgctgttgttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttgactatcccttgctcc 18511103  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  18511102 acacatcaagtt 18511091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 16092189 - 16092116
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttt 76  Q
    |||||||||||| ||||||||||| | ||||||||||||| |||| ||||| ||||||| ||||||||||||||    
T  16092189 tgttctctcttcttttctctctcgctgttttctacttttggcttgcgtttacaattgttccatatactttgttt 16092116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 20045292 - 20045365
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatca 93  Q
    ||||||||| |||| |||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||||    
T  20045292 tctctcgttgttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatca 20045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 17073203 - 17073283
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||  |||||| || |||||||  || |||||||||    
T  17073203 ttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgatcatcacttgctccacacatcaa 17073283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 20043279 - 20043353
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    ||||||||||| |||| ||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  20043279 tgttctctctttcttt-tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttg 20043353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 40221833 - 40221900
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    ||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  40221833 tctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgctt 40221900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 21948336 - 21948433
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactt--tgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| |||| ||||  | ||||| |||||| |||||| |||  || ||||||||||||    
T  21948336 tctctctcgctattttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgattatcccttgctccacacatcaagtt 21948433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 21289065 - 21289158
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| ||||||||||| ||| || |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  21289065 tctctcgttgttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 21289158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 18596951 - 18597009
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  18596951 tctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttg 18597009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 2175219 - 2175305
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  2175219 cgttgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 2175305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 2954705 - 2954811
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgttt-ataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| |  | ||||||||||||| ||||||||  ||||||||| |||| ||||||||||| |||  | ||||||||||| ||     
T  2954705 tgttctctcttcttttctctcgc--tgttttctacttttggcttgtgttacataattgttccatacactttgttttggttgtctgattatcacttactcc 2954802  T
Q  102 acacatcaa 110  Q
    |||||||||    
T  2954803 acacatcaa 2954811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 113
Target Start/End: Original strand, 6747601 - 6747708
Alignment:
Q  10 tcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg---ttttgattgcttaattatcacttattctacac 105  Q
    ||||| |||||||| | ||| ||||| ||||||| |||||||||||||||||| |||| ||||||   ||||| |||||| |||||| |||  |||||||    
T  6747601 tcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctctacac 6747700  T
Q  106 atcaagtt 113  Q
    ||||||||    
T  6747701 atcaagtt 6747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 39397981 - 39397920
Alignment:
Q  17 ttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||  | ||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  39397981 ttctctctcactgttttctacttttggcttgagtttataattgtttcatacactttgttttg 39397920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 39854772 - 39854886
Alignment:
Q  3 tgttctctcttcctttctctctcg---ttattttctacttttgacttgtgtttataattgtttcatatacttt-gttttgattgcttaattatcacttat 98  Q
    |||||||||||||||| |||||||   || |||| |||||||| |||||||||||||||||| |||| |||||  ||||| |||||||| |||| |||      
T  39854772 tgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttgc 39854871  T
Q  99 tctacacatcaagtt 113  Q
    || ||| ||||||||    
T  39854872 tccacatatcaagtt 39854886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 16776477 - 16776559
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| || |||||||||||||| |||||||||||||||| | |||||  |||  || ||||||||||||    
T  16776477 ttttctacttttggcttgtatt-ataattgtttcatacactttgttttgattgcctgattattccttgctccacacatcaagtt 16776559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 20054126 - 20054231
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| |||| |||||| |  |||||||||||||  |||||||||||| |  |||||| ||||||||||| |||||| ||||| ||||  ||||    
T  20054126 tgttctctctttcttt-tctctcttcgttttctacttttgt-ttgtgtttataact--ttcatacactttgttttggttgcttgattattacttgctcta 20054221  T
Q  103 cacatcaagt 112  Q
    ||||||||||    
T  20054222 cacatcaagt 20054231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 20505818 - 20505722
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg---ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||| ||||| |||||||||||||||||| |||| ||||||   ||||| |||| | ||||| ||||  || ||||||||||||    
T  20505818 tctctcgttgttttctagttttggcttgtgtttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtt 20505722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 38960093 - 38960006
Alignment:
Q  24 tcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  38960093 tcgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 38960006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 18467002 - 18467088
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  | |||| |||||||||||||||||| |||||| |||  || ||||||||||||    
T  18467002 cgttgttttctacttttggcttgtatttataact--tccatacactttgttttgattgcttgattatcccttgctccacacatcaagtt 18467088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 21684413 - 21684327
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||| | ||||  |||||| |||| |||||||||||||||||| |||||| |||  || ||||||||||||    
T  21684413 cgttgttttctacttttggcttttattta--attgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagtt 21684327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 25804342 - 25804428
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  25804342 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 25804428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 38882406 - 38882492
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  38882406 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 38882492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 2818325 - 2818253
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg 73  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| ||||||    
T  2818325 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg 2818253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 6745386 - 6745433
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||||||||    
T  6745386 ttttcgacttttggcttgtgtttataattgttccatacactttgtttt 6745433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 31179326 - 31179247
Alignment:
Q  32 ttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||| ||||||||||  ||| || |||| ||||||||||| ||||||||||||| |||  || | ||||||||||    
T  31179326 ttctacttttggcttgtgttta--attattccatacactttgttttggttgcttaattatcccttgctccatacatcaagtt 31179247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 110
Target Start/End: Original strand, 39798348 - 39798431
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || |||||||||    
T  39798348 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaa 39798431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 4236946 - 4237032
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  |  ||||||||||||    
T  4236946 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgcttcacacatcaagtt 4237032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 10587133 - 10587218
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| |||||||   || |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  10587133 cgttgttttctacttttgacttgtatttataa--cttccatacactttgttttggttgcttgattatc-cttgctccacacatcaagtt 10587218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 18469327 - 18469413
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  | |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  18469327 cgttgttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 18469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 25921434 - 25921348
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||| ||||| |||||| |||||| |||  || ||||||||||||    
T  25921434 cgttgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatcaagtt 25921348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 27912854 - 27912940
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||  ||||| ||||||| |  | |||| ||||||||||| |||||| |||||| |||| || ||||||||||||    
T  27912854 cgttgttttctacttttagcttgtatttataact--tccatacactttgttttggttgcttgattatcccttactccacacatcaagtt 27912940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 36402318 - 36402205
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||  ||||||||||||||||||  ||| |||||| ||||| |||| | |||||| |||  |    
T  36402318 tgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgct 36402219  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  36402218 ccacacatcaagtt 36402205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 14374 - 14264
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| |||  || |    
T  14374 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctcca 14275  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  14274 cacatcaagtt 14264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 6e-30; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 14808106 - 14808216
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| ||||||  ||  || |    
T  14808106 tgttctctcttcttttctctctcgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatccgttgctcca 14808205  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  14808206 cacatcaagtt 14808216  T

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Target: chr8; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 33541400 - 33541290
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| |  |||||||||||| |||||||||||||||||| |||| ||||| |||||||||||| |||||| |||| || |    
T  33541400 tgttctctcttcctttctctctcgctgatttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgattatcccttactcca 33541301  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  33541300 cacatcaagtt 33541290  T

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Target: chr8; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 14419180 - 14419070
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||| || | | ||||||||||  || |    
T  14419180 tgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgttttggtttcctgattatcacttgctcca 14419081  T
Q  103 cacatcaagtt 113  Q
     ||||||||||    
T  14419080 tacatcaagtt 14419070  T

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Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 37214254 - 37214144
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||  ||| ||||||||||| ||||||  ||||| |||| || |    
T  37214254 tgttttctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttgcttatctcttactcca 37214155  T
Q  103 cacatcaagtt 113  Q
     ||||||||||    
T  37214154 tacatcaagtt 37214144  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 15073056 - 15073167
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||| | |||| |||  ||     
T  15073056 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttgactatcccttgctcc 15073155  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  15073156 acacatcaagtt 15073167  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 30480493 - 30480386
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | ||||||||||||| ||||| |||||||||||| |||| ||||||||||| |||||| |||||  |||| || |    
T  30480493 tgttctctcttcttttctctctcgctgttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgattattccttactcca 30480394  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  30480393 cacatcaa 30480386  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 36865901 - 36865994
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| ||| |||||||||||||| |||| ||||||||||| |||||| ||||||||||  || ||||||||||||    
T  36865901 tctctcgttgttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgattatcacttgctccacacatcaagtt 36865994  T

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Target: chr8; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 41383007 - 41383119
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||||||| ||||| | ||| |||||||||| || |||||||||||||||||| |||| |||||||||||||||||| |||||| |||  ||    
T  41383007 tgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgattatctcttgctc 41383106  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  41383107 cacacatcaagtt 41383119  T

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Target: chr8; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 181824 - 181897
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||| ||||||||  ||| ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  181824 tgttctctcttcttttctctc--gttgttttctacttttggcttgtgtttataattgtttcatacactttgttttg 181897  T

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Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 25952866 - 25952975
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| |||| |||||||   |||||||||||||  ||||||||||||||| |||||| ||||| ||||| |||||| ||||||||||  || |    
T  25952866 tgttctctctttcttt-tctctcgccgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttctcca 25952964  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  25952965 cacatcaagtt 25952975  T

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Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 35872443 - 35872336
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||| |||   ||||||||||| ||||||||||||||| || |||| ||||| ||||| |||||| |||||| |||| |  |    
T  35872443 tgttctctcttcttttctctcttgtt---ttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttca 35872347  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  35872346 cacatcaagtt 35872336  T

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Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 15068354 - 15068437
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||||||| |||||||| |||| ||||||||||| |||||| | |||| ||| ||| ||||||||||||    
T  15068354 ttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttgactatcccttgttccacacatcaagtt 15068437  T

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Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 27911439 - 27911532
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || | ||||||||||  || | ||||||||||||  || ||||||||||||    
T  27911439 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagtt 27911532  T

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Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 27957858 - 27957951
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| || | ||||||||||  || | ||||||||||||  || ||||||||||||    
T  27957858 tctctctcgttgttttctacttttggcttgtgtttataattgttcca-acactttgttttagtttc-taattatcacttgctccacacatcaagtt 27957951  T

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Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 14477596 - 14477705
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||| ||||| ||||||||||| | |||| |  ||||| ||||||||||| ||||||||||| ||||||||||| |||  | ||||||||||  || |    
T  14477596 tgttctttcttcttttctctctcgcttttttttt-ttttggcttgtgtttatgattgtttcatacactttgttttggttgtctgattatcacttgctcca 14477694  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  14477695 cacatcaagtt 14477705  T

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Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 43079976 - 43080062
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||||| |  |||||| ||||||||||| |||||||||||||  ||  || ||||||||||||    
T  43079976 cgttgttttctacttttgacttgtatttataact--ttcatacactttgttttggttgcttaattatccattgctccacacatcaagtt 43080062  T

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Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 43082347 - 43082433
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| ||||||||||||| |||  || ||||||||||||    
T  43082347 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttaattatcccttgctccacacatcaagtt 43082433  T

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Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 44721217 - 44721303
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  ||| || |||| ||||||||||| |||||| |||||| |||| || ||||||||||||    
T  44721217 cgttgttttctacttttgacttgtattta--attattccatacactttgttttggttgcttgattatcccttactccacacatcaagtt 44721303  T

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Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 1225512 - 1225569
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgttt 62  Q
    |||||||||||| |||||||| |  | |||||||||||||||||||||||||||||||||    
T  1225512 tgttctctcttcttttctctcgc--tgttttctacttttgacttgtgtttataattgttt 1225569  T

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Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 13858450 - 13858369
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||||||||||| |  | |||| ||||||||||| |||||| ||||||||||  || ||||||||||||    
T  13858450 ttttctacttttggcttgtgtttataact--tccatacactttgttttggttgcttgattatcacttgctccacacatcaagtt 13858369  T

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Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 15809592 - 15809678
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||| ||||| ||||| ||||  ||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  15809592 cgttgttttctatttttgccttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 15809678  T

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Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 27827359 - 27827445
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  27827359 cgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 27827445  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 28283182 - 28283096
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| |||||  || ||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  28283182 cgttgttttctacttttggcttgtatttat--ttttttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 28283096  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 31162574 - 31162664
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagt 112  Q
    ||||||||| ||||||||||||| ||||| |||||||   || |||| ||||||||||| || ||||||||| ||||  || |||||||||||    
T  31162574 tctctcgttgttttctacttttggcttgtatttataa--cttccatacactttgttttggttacttaattattacttgctccacacatcaagt 31162664  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 28251557 - 28251445
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||| ||| ||||| | ||| |||||||||| || |||||| ||||||||||| |||| ||||||||||| |||| | |||||  |||  ||    
T  28251557 tgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgattattccttgctc 28251458  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  28251457 cacacatcaagtt 28251445  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 41385089 - 41385181
Alignment:
Q  3 tgttctctcttcc-tttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatac-tttgttttgattgcttaattatc 92  Q
    ||||||||||||| |||||||| | ||| |||| |||||||| |||||||||||||||||| |||| || ||||||||| ||| || ||||||    
T  41385089 tgttctctcttccatttctctcgctgttgttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgattatc 41385181  T

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Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 43530494 - 43530575
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  43530494 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 43530575  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 32339683 - 32339770
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||||||||||||||| ||  |||||||| |||| |||||| ||||| |||||| |||||| |||   | ||||||||||||    
T  32339683 cgttattttctacttttgacttgtatt--taattgttccatacactttgattttggttgcttgattatcccttgccccacacatcaagtt 32339770  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 3874367 - 3874453
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| ||||||  ||||| |||  || ||||||||||||    
T  3874367 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttggttatctcttgctccacacatcaagtt 3874453  T

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Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 3883556 - 3883470
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| ||||||  ||  || ||||||||||||    
T  3883556 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcctttgctccacacatcaagtt 3883470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 27829670 - 27829756
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||| | ||||  |||||| |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  27829670 cgttgttttctacttttgacttatattta--attgttccatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 27829756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 31578256 - 31578216
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  31578256 tctctcgttgttttctacttttg-cttgtgtttataattgtt 31578216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 6e-30; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 6133180 - 6133290
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||| |||||  |||  || |    
T  6133180 tgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgattattccttgctcca 6133279  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  6133280 cacatcaagtt 6133290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 13547497 - 13547608
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||  |||||||||||| |||     
T  13547497 tgttctctcttcctttctctctcgatcttttctacttttggcttgtgtttataattgttccatacactttgattttggttgtctaattatcacttgttcc 13547596  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  13547597 acacatcaagtt 13547608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 36919574 - 36919464
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| ||||| ||||| |||| | |||||| |||  || |    
T  36919574 tgttctctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgattatcccttgctcca 36919475  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  36919474 cacatcaagtt 36919464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 2891635 - 2891723
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||| ||||| |||||| |||||    
T  2891635 tgttctctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattat 2891723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 14787406 - 14787309
Alignment:
Q  16 tttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  14787406 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 14787309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 14789405 - 14789308
Alignment:
Q  16 tttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  14789405 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 14789308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 36921483 - 36921373
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||| | | ||||||||||||| ||||||||||||||||||||||| ||||| ||||| |||| | |||||| |||  || |    
T  36921483 tgttctctcttcttttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgattatcccttgctcca 36921384  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  36921383 cacatcaagtt 36921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 49088916 - 49089009
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| | |||| |||| || ||||||||||||    
T  49088916 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttactcaacacatcaagtt 49089009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 27499406 - 27499473
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||    
T  27499406 tctctctcgttgttttctacttttgacttgtgtttataattgttccataaactttgttttggttgctt 27499473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 40091405 - 40091295
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||| | ||||||||||||||| ||||||||||||||| || |||| ||||| ||||| |||||| ||||||  ||  || |    
T  40091405 tgttctctcttcttttctctcttgctattttctacttttggcttgtgtttataattattccatacactttattttggttgcttgattatcttttgctcca 40091306  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  40091305 cacatcaagtt 40091295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 16453653 - 16453761
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| |||||||| |  | ||||||||||||| |||||| |||||| ||||||||| ||||||||||| |||| | ||||||||||  || |    
T  16453653 tgttctctcttcttttctctcac--tgttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgattatcacttgctcca 16453750  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  16453751 cacatcaagtt 16453761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 47563104 - 47563212
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||||||||||||| |  | ||||||||||||| ||| |||||||||||||| |||| ||||||||||| |||||| |||||  |||  || |    
T  47563104 tgttctctcttcctttctctcgc--tgttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgattattccttgctcca 47563201  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  47563202 cacatcaagtt 47563212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 12395835 - 12395725
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||| ||||||| | ||||||||||| | ||||||||||||| ||  |||  |||||||||| |||| | ||||||||||  || |    
T  12395835 tgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctcca 12395736  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  12395735 cacatcaagtt 12395725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 12400797 - 12400687
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||| ||||||| | ||||||||||| | ||||||||||||| ||  |||  |||||||||| |||| | ||||||||||  || |    
T  12400797 tgttctctcttcctttctgtctcgttgtcttctacttttggcatgtgtttataatttttcgatactctttgttttggttgcctgattatcacttgctcca 12400698  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  12400697 cacatcaagtt 12400687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 22802694 - 22802612
Alignment:
Q  31 tttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  22802694 tttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 22802612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 24879333 - 24879423
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||    
T  24879333 tgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattat 24879423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 24446644 - 24446537
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||| |||   ||||||||||| ||||||||||||||| || |||| ||||| ||||| |||||| |||||| |||| |  |    
T  24446644 tgttctctcttcttttctctcttgtt---ttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgattatcccttacttca 24446548  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  24446547 cacatcaagtt 24446537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 36380718 - 36380797
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| || || ||||| || |||||||||    
T  36380718 ttttctacttttggcttgtgtttataattgtttcatacactttg-tttgattgcttgatcattacttactccacacatcaa 36380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 38928150 - 38928059
Alignment:
Q  22 tctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| ||||||||||||| |||||| |||||| |||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  38928150 tctcgttgttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 38928059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 22800822 - 22800740
Alignment:
Q  31 tttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||| |||||| | |||| |||  ||  |||||||||||    
T  22800822 tttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgactatcccttgctccccacatcaagtt 22800740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 52942478 - 52942368
Alignment:
Q  3 tgttctctcttcctttc-tctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| |||| |||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||| |||||||||| | |||||| |||| |    
T  52942478 tgttctctcttcttttcctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttact 52942379  T
Q  100 ctacacatcaa 110  Q
    | |||||||||    
T  52942378 ccacacatcaa 52942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 37313052 - 37312959
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||| ||| || |||||||||||||||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  37313052 tctctcgctgttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttgactatcccttgctccacacatcaagtt 37312959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 47275084 - 47275177
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||| |||||| |||| || ||||||||||||    
T  47275084 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtt 47275177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 5101273 - 5101369
Alignment:
Q  17 ttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| | |||||| | |||| |||||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  5101273 ttctctctcggtgttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgatccacacatcaagtt 5101369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 17662208 - 17662125
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| | |||| ||||||||||| |||| |||||| ||||||||||| |||||| |||  || ||||||||||||    
T  17662208 ttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgattatcccttgctccacacatcaagtt 17662125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 22046648 - 22046561
Alignment:
Q  24 tcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||| ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  22046648 tcgttgttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 22046561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 4215673 - 4215734
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||||||||| |||||| |||||||||||||||| ||||||||||  |||||| |||||    
T  4215673 ttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgattat 4215734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 9148607 - 9148693
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| ||| ||| ||||||||||||    
T  9148607 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgttccacacatcaagtt 9148693  T

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Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 22044352 - 22044266
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  22044352 cgttgttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 22044266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 33415478 - 33415369
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| |  | ||||||||||||| |||||||||||||||||  |||| |||||| ||||| |||||| | |||| |||  ||     
T  33415478 tgttctctcttcttttctctcgc--tgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctcc 33415381  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  33415380 acacatcaagtt 33415369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 48486691 - 48486771
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||||||||| |||||||||||||||||| |||  ||||||||||  |||||| |||||| ||| ||| || ||||||    
T  48486691 ttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgattatcgcttgttccacgcatcaa 48486771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 18409319 - 18409228
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| ||||||||||||||| |||||| ||||||   || |||| ||||||||||| |||||| | ||||||||  || ||||||||||||    
T  18409319 tctctcgctattttctacttttgtcttgtgattataa--cttccatacactttgttttggttgcttgactatcacttgctccacacatcaagtt 18409228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 24880795 - 24880868
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgt 74  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| |||||||||||||||||| | || |||||||    
T  24880795 tgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccgtacactttgt 24880868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 51015617 - 51015703
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  51015617 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 51015703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 5198781 - 5198866
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagttatta 117  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| ||||||  ||  || ||||||||||||||||    
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatcaagttatta 5198866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 7941700 - 7941781
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| |||   |||||| |||| ||||||||||| ||||||||||||| |||  || ||||||||||||    
T  7941700 ttttctacttttgccttgtatttc--attgttccatacactttgttttggttgcttaattatcccttgctccacacatcaagtt 7941781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 9174101 - 9174020
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  ||| ||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 9174020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 24889168 - 24889216
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    ||||||||||||| |||||| ||||||||||| |||| |||||||||||    
T  24889168 ttttctacttttggcttgtgattataattgttccatacactttgttttg 24889216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 31849554 - 31849473
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 31849473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 40637417 - 40637493
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||| ||||||||||| |||| ||||||||||    
T  40637417 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgtttt 40637493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 47210752 - 47210671
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  47210752 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgctttattatctcttgctccacacatcaagtt 47210671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 18534822 - 18534718
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| ||||||||| |  |||||||||||||||  |||||||||||| |  | |||| ||||||||||| |||||| ||||| ||||  || |    
T  18534822 tgttctctctttctttctctcgc--tattttctacttttgt-ttgtgtttataact--tccatacactttgttttggttgcttgattattacttgctcca 18534728  T
Q  103 cacatcaagt 112  Q
    ||||||||||    
T  18534727 cacatcaagt 18534718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 18537463 - 18537360
Alignment:
Q  4 gttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctac 103  Q
    |||||||||| |||||||||  ||| |||| ||||||||  |||||||||||| |  | |||| |||||||||||||||||| ||||| ||||  || ||    
T  18537463 gttctctctttctttctctc--gttgttttatacttttgt-ttgtgtttataact--tccatacactttgttttgattgcttgattattacttgctccac 18537369  T
Q  104 acatcaagt 112  Q
    |||||||||    
T  18537368 acatcaagt 18537360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 36378661 - 36378707
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttt 76  Q
    ||||||||||||   |||||||||||||||||||||| |||||||||    
T  36378661 ttttctacttttcgtttgtgtttataattgtttcatacactttgttt 36378707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 2484834 - 2484748
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||| ||||| |||||| |||||| |||  || ||||||||||||    
T  2484834 cgttgttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgattatcccttgctccacacatcaagtt 2484748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 5635437 - 5635351
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| ||| || |||||| |||  || ||||||||||||    
T  5635437 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgattgattatcccttgctccacacatcaagtt 5635351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 16455586 - 16455679
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||| ||||  ||| || |||||| |||| |||| ||||||||||| |||| | ||||||||||  || ||||||||||||    
T  16455586 tctctcgctgttttctagttttagcttatgattataactgttccatacactttgttttggttgcctgattatcacttgctccacacatcaagtt 16455679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 25358000 - 25358040
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  25358000 tctctcgttgttttctacttttg-cttgtgtttataattgtt 25358040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 61
Target Start/End: Complemental strand, 31983507 - 31983467
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  31983507 tctctcgttgttttctactttt-acttgtgtttataattgtt 31983467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 37089333 - 37089247
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| ||||||  ||  || ||||||||||||    
T  37089333 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccattgctccacacatcaagtt 37089247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Complemental strand, 5084266 - 5084222
Alignment:
Q  140 tattttaccctgtaattatttcatggcaccaacccaccactctgc 184  Q
    ||||||||||||| || ||||||||||||  ||||||||||||||    
T  5084266 tattttaccctgtcatcatttcatggcacacacccaccactctgc 5084222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 8631374 - 8631293
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||  |||||| |||||| |||  || ||||||||||||    
T  8631374 ttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgattatcccttgctccacacatcaagtt 8631293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 9176429 - 9176348
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  ||| || |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  9176429 ttttctacttttggcttgtattta--attattccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 9176348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 11006209 - 11006128
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||  ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  11006209 ttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 11006128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 11008523 - 11008442
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||  ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  11008523 ttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 11008442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 28454026 - 28454084
Alignment:
Q  3 tgttctctcttcctttctctctc--gttattttctacttttgacttgtgtttataattgt 60  Q
    ||||||||||| |||||| ||||  ||| ||||||||||||| |||||||||||||||||    
T  28454026 tgttctctctttctttctttctccggttgttttctacttttg-cttgtgtttataattgt 28454084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 3022437 - 3022547
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||||| |||| ||||||||||| |||||| ||||||||||  || |    
T  3022437 tgttctctcttcctttttctctcgttgttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctcca 3022536  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  3022537 cacatcaagtt 3022547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 14837533 - 14837642
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||||||  ||| ||||||||||| |||||| ||||||||||  || |    
T  14837533 tgttctctcttcctttctctctcgctgttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgattatcacttgctcca 14837632  T
Q  103 cacatcaagt 112  Q
    ||||||||||    
T  14837633 cacatcaagt 14837642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 6258807 - 6258697
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||  |||||||||||||||||| || | ||||||||||| |||| | ||||||||||  || |    
T  6258807 tgttctctcttcctttctctctcgctgttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgattatcacttgctcca 6258708  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  6258707 cacatcaagtt 6258697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 15539519 - 15539437
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||  ||| ||||||||||||||||||    
T  15539519 tgttctctcttcctttctctctcgttgttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgctt 15539437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 17849382 - 17849492
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||||||||||||| |||| ||||||||||||| |||||||||| ||||||| |||| ||||||||||| |||||| | |||| |||  || |    
T  17849382 tgttctctcttcctttctctcccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttgactatcccttgctcca 17849481  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  17849482 cacatcaagtt 17849492  T

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Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 19007905 - 19008015
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||| ||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||  |||  || |    
T  19007905 tgttctctattcatttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctcca 19008004  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  19008005 cacatcaagtt 19008015  T

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Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 22407444 - 22407362
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  22407444 tgttctctcttcctttctctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgctt 22407362  T

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Target: chr2; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 42923499 - 42923386
Alignment:
Q  3 tgttctctcttcctttctctctc--gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||||||||||  ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||| |||  |    
T  42923499 tgttctctcttcttttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgct 42923400  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  42923399 ccacacatcaagtt 42923386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 28196900 - 28196981
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgct 84  Q
    |||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||    
T  28196900 tgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgct 28196981  T

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Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 5375336 - 5375225
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttct-acttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| ||||||||| | | |||| | ||||||||||||| |||||||||||| |||| |||||||||||||||||| |||||| |||| ||     
T  5375336 tgttctctcttcttttctctcttgctgtttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgattatcccttactcc 5375237  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  5375236 acacatcaagtt 5375225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 22707741 - 22707634
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | |||||||||| || |||||||||||||||||| |||| ||||||||||| |||||| ||| |  |||| || |    
T  22707741 tgttctctcttcctttctctctcgctgttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgattgttccttactcca 22707642  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  22707641 cacatcaa 22707634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 6264138 - 6264028
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||| ||||||||| |||| ||||||||||| |||| | ||  ||||||  || |    
T  6264138 tgttctctcttcctttctctctcgttgttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgatagtcacttgctcca 6264039  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  6264038 cacatcaagtt 6264028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 22287326 - 22287216
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | |||||||| |||||||||| |||||||||||| |||| ||| ||||||| |||||| | |||| |||  || |    
T  22287326 tgttctctcttcctttctctctcgctgttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttgactatcccttgctcca 22287227  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  22287226 cacatcaagtt 22287216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 44289057 - 44288982
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||| ||||||||||| | ||||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  44289057 tgttctctcttcatttctctctcgctgttttctactgttggcttgtgtttataattgtttcatacactttgttttg 44288982  T

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Target: chr2; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 28459180 - 28459073
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| ||||||||| |  | |||||||||||||  ||||||||||||||||| |||| ||||||||||| |||||| ||||||||||  || |    
T  28459180 tgttctctctttctttctctccc--tgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgattatcacttgctcca 28459083  T
Q  103 cacatcaagt 112  Q
    ||||||||||    
T  28459082 cacatcaagt 28459073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 7462937 - 7462825
Alignment:
Q  3 tgttctctcttc-ctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||| ||||||||| | ||| ||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||| ||||||  ||  ||    
T  7462937 tgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgattatcctttgctc 7462838  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  7462837 cacacatcaagtt 7462825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 34979565 - 34979469
Alignment:
Q  17 ttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| | ||||||||||||||||| |||||||||||||| |||| ||||| ||||| |||||| |||||  |||| || ||||||||||||    
T  34979565 ttctctctcgctgttttctacttttgacttatgtttataattgttccatacactttattttggttgctttattattccttactccacacatcaagtt 34979469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 21520683 - 21520569
Alignment:
Q  3 tgttctctcttcctttctctctcg---ttattttctacttttgacttgtgtttataattgtttcatatacttt-gttttgattgcttaattatcacttat 98  Q
    |||||||||||| |||||||||||   || ||||||||||||| |||||||||||||||||| |||| |||||  ||||| |||| | ||||||||||      
T  21520683 tgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttgc 21520584  T
Q  99 tctacacatcaagtt 113  Q
    || ||||||||||||    
T  21520583 tccacacatcaagtt 21520569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 23871082 - 23871158
Alignment:
Q  4 gttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattg--tttcatatactttgttttg 78  Q
    ||||||||||| |||||||| || | ||||||||||||| ||||||||||||||||  ||||||| |||||||||||    
T  23871082 gttctctcttcatttctctcccgctgttttctacttttgccttgtgtttataattgtttttcatacactttgttttg 23871158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 35215553 - 35215467
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  ||| |||||||| |||||||||| ||||||||||||| |||  || ||||||||||||    
T  35215553 cgttgttttctacttttgacttgtattta--attatttcatatgctttgttttggttgcttaattatcccttgctccacacatcaagtt 35215467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 113
Target Start/End: Complemental strand, 11739532 - 11739456
Alignment:
Q  37 cttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||| ||| | |||| |||  |||||||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttttatttcttgactatcccttgctctacacatcaagtt 11739456  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 38414156 - 38414081
Alignment:
Q  19 ctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcac 94  Q
    |||||||||| ||||||||||||  ||||||||||||||| || |||| ||||||||||  |||| ||||||||||    
T  38414156 ctctctcgttgttttctacttttaccttgtgtttataattattccatacactttgttttcgttgcctaattatcac 38414081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 22163012 - 22162925
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatc 92  Q
    |||||||||||| ||||||||  ||| ||||||||||||| |||||| |||||| |||| |||| | ||||||||| |||||| ||||||    
T  22163012 tgttctctcttcttttctctc--gttgttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgattatc 22162925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 13910006 - 13909920
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||| || ||||||||||||    
T  13910006 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttactccacacatcaagtt 13909920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 40032041 - 40031968
Alignment:
Q  5 ttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    |||||||||||||| ||||| | ||| |||||||| |||| |||||||||||||||||| |||||||||||||||    
T  40032041 ttctctcttccttttctctcgctgttgttttctacatttg-cttgtgtttataattgttccatatactttgtttt 40031968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 24162184 - 24162098
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||||||||||| ||||| ||||| |||||| |||||| |||  || ||||||||||||    
T  24162184 cgttgttttctacttttggcttgtattta--attgtttcatacacttttttttggttgcttgattatctctttctccacacatcaagtt 24162098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 35217930 - 35217844
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||||||||| ||||  ||| || ||||  |||||||||| ||||||||||||| |||  || ||||||||||||    
T  35217930 cgttgttttctacttttgacttgtattta--attattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagtt 35217844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 38020372 - 38020433
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||||||||  |||||| ||||||||||| |||| ||||||||||| |||||| |||||    
T  38020372 ttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgattat 38020433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 45279962 - 45279876
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  45279962 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 45279876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 17848705 - 17848814
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| |  | ||||||||||||   ||| |||||||||||||||||| |||  | ||||| |||||| ||||||||||  ||     
T  17848705 tgttctctcttcttttctctcgc--tgttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgctcc 17848802  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  17848803 acacatcaagtt 17848814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 20146595 - 20146542
Alignment:
Q  6 tctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  20146595 tctctctttcttt-tctctcgttgttttctacttttg-cttgtgtttataattgtt 20146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 17897236 - 17897153
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||||||| |||||||||  ||| ||||||||||||| ||||||||||||| ||  ||||  ||||||||||| |||||| |||||    
T  17897236 tgttctctctttctttctctc--gttgttttctacttttg-cttgtgtttataactg--tcatcaactttgttttggttgcttgattat 17897153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 43623570 - 43623500
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatacttt 72  Q
    |||||||||||| |||||||| | ||| ||||||||||||| ||| || ||||||||||| |||| |||||    
T  43623570 tgttctctcttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacacttt 43623500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 27105091 - 27105177
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||  ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  27105091 cgttgttttctacttttggcttgcattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 27105177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 113
Target Start/End: Complemental strand, 37962867 - 37962826
Alignment:
Q  72 tgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| ||||||||||||||| || ||||||||||||    
T  37962867 tgttttgattacttaattatcacttactccacacatcaagtt 37962826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 20592343 - 20592444
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| ||||||||   | ||||||||||||||| |||||| |||||| |  | |||| ||||||||||| |||||| ||||| ||||  ||||    
T  20592343 tgttctctctttctttctctt--gatattttctacttttg-cttgtgattataact--tccatacactttgttttggttgcttgattattacttgctcta 20592437  T
Q  103 cacatca 109  Q
    |||||||    
T  20592438 cacatca 20592444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 45332098 - 45332054
Alignment:
Q  69 ctttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| ||||||||||||| ||| ||| ||||||||||||    
T  45332098 ctttgttttggttgcttaattatcccttgttccacacatcaagtt 45332054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 6e-30; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 18307398 - 18307508
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||| ||||||||| ||  || |    
T  18307398 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcatttgctcca 18307497  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  18307498 cacatcaagtt 18307508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 25251266 - 25251156
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||| ||||||||||| |||||| | |||| |||  || |    
T  25251266 tgttctctcttcctttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgactatcccttgctcca 25251167  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  25251166 cacatcaagtt 25251156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 14097961 - 14097850
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||| |||||| |||||| |||  |      
T  14097961 tgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttc 14097862  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  14097861 acacatcaagtt 14097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 50248562 - 50248455
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||||| |||| ||||||||||| |||||| |||||| |||| || |    
T  50248562 tgttctctcttcctttctctctcgttgttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgattatcccttactcca 50248463  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  50248462 cacatcaa 50248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 2949224 - 2949114
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||| ||||| |||||| |||||| |||  || |    
T  2949224 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgattatcccttgctcca 2949125  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  2949124 cacatcaagtt 2949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 12302497 - 12302386
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| ||||| || | | ||||||||||  ||     
T  12302497 tgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctcc 12302398  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  12302397 acacatcaagtt 12302386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 11457467 - 11457357
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | ||||||||||||| |||||||||| ||||||| |||||||||||||||| |||| | ||||||||||  |  |    
T  11457467 tgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgattatcacttgcttca 11457368  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  11457367 cacatcaagtt 11457357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 13215373 - 13215483
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||| || | |||| |||  || |    
T  13215373 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgactatcccttgctcca 13215472  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  13215473 cacatcaagtt 13215483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 31490201 - 31490311
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||  ||||||||||  | ||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||| |||  || |    
T  31490201 tgttctctcttattttctctctccctgttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgattatctcttgctcca 31490300  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  31490301 cacatcaagtt 31490311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 4131367 - 4131257
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||| ||| ||||||||||||| ||||||| ||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||| |||  ||      
T  4131367 tgttctctgttcttttctctctcgttgttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatctcttgctccg 4131268  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  4131267 cacatcaagtt 4131257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 17319176 - 17319283
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| | || |||| ||||||||||| ||| || |||||  |||| || |    
T  17319176 tgttctctcttcttttctctctcgctattttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgattattccttactcca 17319275  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  17319276 cacatcaa 17319283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 41647209 - 41647320
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||| |||||| ||||| |||  | ||||||||||  ||     
T  41647209 tgttctctcttcctttctctcttgctgttttctacttttgacttgtgtttataattatttcatacactttgattttggttgtctgattatcacttgctcc 41647308  T
Q  102 acacatcaagtt 113  Q
     |||||||||||    
T  41647309 gcacatcaagtt 41647320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 50078766 - 50078671
Alignment:
Q  18 tctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||  |||  || ||||||||||||    
T  50078766 tctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtt 50078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 18839877 - 18839987
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||||||||||||||||| |||| ||||||||| |||| ||| |||||  |||  || |    
T  18839877 tgttctctcttcttttctctctcgctgttttctagttttggcttgtgtttataattgttccatacactttgtttcgattacttgattattccttgctcca 18839976  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  18839977 cacatcaagtt 18839987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 25248526 - 25248433
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||| | |||  |||| || ||||||||||||    
T  25248526 tctctcgctgttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttgactattccttactccacacatcaagtt 25248433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 50076664 - 50076577
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||||||| ||| ||||||||| |||||||||||| ||||||||||||||||||| |||| ||||||||||  |||||| |||||    
T  50076664 tgttctctcttctttt-tctctcgttgttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctttattat 50076577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 3579572 - 3579465
Alignment:
Q  6 tctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacac 105  Q
    ||||||| ||| ||||||||  | ||||||||||||| |||||||||||||||||| |||| ||||| ||||| |||| | ||||||||||  || ||||    
T  3579572 tctctctccctctctctctctctgttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgattatcacttgctccacac 3579473  T
Q  106 atcaagtt 113  Q
    ||||||||    
T  3579472 atcaagtt 3579465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 9241077 - 9240969
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| ||||||||| |  | |||||||||||||  |||| ||||||||||||||||| ||||||||||| |||||| ||||||||||  || |    
T  9241077 tgttctctctttctttctctcgc--tgttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgattatcacttgctcca 9240980  T
Q  103 cacatcaagtt 113  Q
    ||| |||||||    
T  9240979 cacttcaagtt 9240969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 47906559 - 47906670
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| | ||| ||||||||||||| |||||| ||||||||||| |||| |||||| |||| |||||| |||||| |||  ||     
T  47906559 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgattatctcttgctcc 47906658  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  47906659 acacatcaagtt 47906670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 31425007 - 31424925
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||  |||| | |||||| || ||||||    
T  31425007 tgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgctt 31424925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 27339123 - 27339010
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| ||| ||    
T  27339123 tgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgtt 27339024  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  27339023 ccacacatcaagtt 27339010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 30780362 - 30780423
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||| |||||| |||||    
T  30780362 ttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgattat 30780423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 6995658 - 6995575
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||||||||| ||||| |||| |||||||||||||||||| | |||| |||  || ||||||||||||    
T  6995658 ttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttgactatcccttgctccacacatcaagtt 6995575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 23816206 - 23816289
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||| |||||  |||  || ||||||||||||    
T  23816206 ttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtt 23816289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 38925473 - 38925363
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg--ttttgattgcttaattatcacttattc 100  Q
    |||||||||||| ||||||||   || ||||||||||||| ||||||||||||| |||| |||| ||||||  ||||| |||| | ||||||||||| ||    
T  38925473 tgttctctcttcttttctctca--ttgttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgattatcacttactc 38925376  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  38925375 cacacatcaagtt 38925363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 18800548 - 18800458
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagt 112  Q
    ||||||||| ||||||||||||| |||||||||||||   || |||| |||||||||||||||||| ||||| | ||  ||||||||||||||    
T  18800548 tctctcgttgttttctacttttggcttgtgtttataa--cttccatacactttgttttgattgcttgattattatttgctctacacatcaagt 18800458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 27336932 - 27336819
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||||||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||  |    
T  27336932 tgttctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgct 27336833  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  27336832 ccacacatcaagtt 27336819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 28207060 - 28206947
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | ||||||||||  |    
T  28207060 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgct 28206961  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  28206960 ccacacatcaagtt 28206947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 17324365 - 17324473
Alignment:
Q  5 ttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctaca 104  Q
    ||||||||  || ||||||||  | ||||||||||||| ||||||||||||||| ||||||| |||||||| || |||||| |||||  |||  || |||    
T  17324365 ttctctctctctctctctctcactgttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgattattccttgctccaca 17324464  T
Q  105 catcaagtt 113  Q
    |||||||||    
T  17324465 catcaagtt 17324473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 110
Target Start/End: Original strand, 47451922 - 47452027
Alignment:
Q  7 ctctcttcctttctctctcgttatt---ttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctac 103  Q
    |||||||||||| ||||||||| ||   ||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || ||    
T  47451922 ctctcttccttt-tctctcgttgttgctttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcgac 47452020  T
Q  104 acatcaa 110  Q
    |||||||    
T  47452021 acatcaa 47452027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 28998225 - 28998129
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg---ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||    |||| |||| | ||||||||||  || ||||||||||||    
T  28998225 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtt 28998129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 29003941 - 29003845
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg---ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||    |||| |||| | ||||||||||  || ||||||||||||    
T  29003941 tctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtt 29003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 28842812 - 28842898
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||| || ||||||||||||    
T  28842812 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttactccacacatcaagtt 28842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 39462808 - 39462921
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||| ||||| | ||| ||||||| ||||| |||||||||||||||||| |||| |||||| |||||||||| | |||||| |||  |    
T  39462808 tgttctctcttctttttctctcgctgttgttttctaattttggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgct 39462907  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  39462908 ccacacatcaagtt 39462921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 25860367 - 25860319
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  25860367 ttttctacttttggcttgtgtttataattgttccatacactttgttttg 25860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 6756817 - 6756873
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||||||||| |||| |||||| | ||||||||||||||||||||||||||||||||    
T  6756817 tgttctctcttc-tttc-ctctcgctgttttctacttttgacttgtgtttataattgtt 6756873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 9459397 - 9459311
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  9459397 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 9459311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 9463224 - 9463138
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  9463224 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 9463138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 13447236 - 13447150
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  13447236 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 13447150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 13762154 - 13762240
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  13762154 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatccctttctccacacatcaagtt 13762240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 15294797 - 15294711
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  15294797 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 15294711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 51750357 - 51750443
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  51750357 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 51750443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 6115094 - 6114980
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||  ||| | ||||||||||||||||| |||||||   || |||| | ||| ||||| |||||| ||||||||||  || |    
T  6115094 tgttctctcttcttttctctc--gttgtcttctacttttgacttgtatttataa--cttccatacattttattttggttgcttgattatcactttctcca 6114999  T
Q  103 cacatcaagt-tattaccg 120  Q
    |||||||||| ||||||||    
T  6114998 cacatcaagtatattaccg 6114980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 15823865 - 15823949
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||| ||||||||||| |||| |||||| ||||| |||| | |||| | |||| || ||||||||||||    
T  15823865 ttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattaccccttactccacacatcaagtt 15823949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 31422847 - 31422803
Alignment:
Q  8 tctcttcctttctctctcgttattttctacttttgacttgtgttt 52  Q
    ||||||| ||||||||||| | |||||||||||||||||||||||    
T  31422847 tctcttcttttctctctcgctgttttctacttttgacttgtgttt 31422803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 50307508 - 50307424
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||  || | ||||||||||    
T  50307508 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccagacatcaagtt 50307424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 28840997 - 28841083
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || || |||||||||    
T  28840997 cgttgttttctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccactcatcaagtt 28841083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 27916797 - 27916836
Alignment:
Q  16 tttctctctcgttattttctacttttgacttgtgtttataa 56  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  27916797 tttctctctcgttgttttctactttt-acttgtgtttataa 27916836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 39932398 - 39932479
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||||| |  | |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  39932398 ttttctacttttggcttgtatttataact--tccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 39932479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 2e-29; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 47148883 - 47148794
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatc 92  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||| || ||||||    
T  47148883 tgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgattatc 47148794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 53468441 - 53468366
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  53468441 tgttctctcttcctttctctctcgctattttctacttttgacttgtgtttataattgttccatacactttgttttg 53468366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 15781150 - 15781258
Alignment:
Q  5 ttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctaca 104  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||| |||| ||||| |||||  ||||| |||||| |||| || |||    
T  15781150 ttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgattatcccttactccaca 15781249  T
Q  105 catcaagtt 113  Q
    |||||||||    
T  15781250 catcaagtt 15781258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 32264026 - 32263919
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||  | ||||||||||  || |    
T  32264026 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtctgattatcacttgctcca 32263927  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  32263926 cacatcaa 32263919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 1626671 - 1626561
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||| ||||||||||  |||||| |||||  |||  || |    
T  1626671 tgttctctcttcctttctctctcgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttgttgcttgattattccttgctcca 1626572  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  1626571 cacatcaagtt 1626561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 54691564 - 54691468
Alignment:
Q  1 tatgttctctcttcctttctctctcg-ttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcactt 96  Q
    |||||| ||||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| | ||||||||||    
T  54691564 tatgttttctcttcctttctctctcggttgttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgattatcactt 54691468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 1313678 - 1313786
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || |    
T  1313678 tgttctctcttcttttctctc--gttgttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcca 1313775  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  1313776 cacatcaagtt 1313786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 3314954 - 3315065
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattct 101  Q
    |||||||||||||||||||||||| | |||||||| |||| |||||||||||||||||| |||| |||||| ||||| |||||| |||||| |||  ||     
T  3314954 tgttctctcttcctttctctctcgctgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctcc 3315053  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  3315054 acacatcaagtt 3315065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 53917652 - 53917541
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| |||||||| | ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| | |||| |||  ||     
T  53917652 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgactatcccttgctcc 53917553  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  53917552 acacatcaagtt 53917541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 3307029 - 3307103
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    |||||||||||||||||||| ||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3307029 tgttctctcttcctttctctttcgctgttttctacttttggcttgtgtttataattgtttcatacactttgtttt 3307103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 12267963 - 12267882
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  12267963 tgttctctcttc-tttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgctt 12267882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 3859808 - 3859895
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||| ||||||||||||| ||||||||||| |||||||| |||| ||||||| ||||||||||||    
T  3859808 cgttgttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgcttaactatcccttattccacacatcaagtt 3859895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 5926753 - 5926666
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| | || ||||||||||| || ||| |||||    
T  5926753 tgttctcttttcctttctctctcgttgttttctacttttg-cttgtgtttataattgttccttacactttgttttggttacttgattat 5926666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 4666783 - 4666890
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||||| | |||| ||||||||  |||| ||||||||||||||||| ||||| ||||| |||| | || |||||||| || |    
T  4666783 tgttctctcttcttttctctctcgctgttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgataatcacttactcca 4666882  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  4666883 cacatcaa 4666890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 6484641 - 6484716
Alignment:
Q  17 ttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattat 91  Q
    |||||||||| | |||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||||||||||    
T  6484641 ttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattat 6484716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 28181273 - 28181348
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||| ||||||| ||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||    
T  28181273 tgttctctcttcttttctctgtcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttg 28181348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 48361639 - 48361568
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||| |||||    
T  48361639 tctctcgttgttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgattat 48361568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 53915484 - 53915401
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| |||||||| | ||| ||||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||    
T  53915484 tgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgctt 53915401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 27635626 - 27635533
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||  |||  || ||||||||||||    
T  27635626 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattattccttgctccacacatcaagtt 27635533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 6232069 - 6232156
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattat 91  Q
    |||||||||||| ||||||||||| | |||| || |||||||||||||||||||||||| |||| ||||| ||||| |||||| |||||    
T  6232069 tgttctctcttc-tttctctctcgctgttttttatttttgacttgtgtttataattgttccatacactttattttggttgcttgattat 6232156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 41849328 - 41849437
Alignment:
Q  3 tgttctctcttccttt-ctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| ||| |||||||||| ||||||||||||| ||||| |||||||   ||||||| ||||||||||| |||||| |||||| |||  ||     
T  41849328 tgttctctcttctttttctctctcgttgttttctacttttggcttgtatttataa--ctttcatacactttgttttggttgcttgattatcccttgctcc 41849425  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  41849426 acacatcaagtt 41849437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 43423451 - 43423346
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| |||||||| |  | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || |    
T  43423451 tgttctctcttcttttctctcgc--tgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgactatcccttgctcca 43423354  T
Q  103 cacatcaa 110  Q
    ||||||||    
T  43423353 cacatcaa 43423346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 880228 - 880120
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||||||||||| ||||||||  ||| |||||||||||||  ||||| |||||| ||||||||| ||||||||||  |||||| |||||  |||| || |    
T  880228 tgttctctcttcttttctctc--gttgttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgattattccttactcca 880131  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  880130 cacatcaagtt 880120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39715734 - 39715809
Alignment:
Q  3 tgttctctctt-cctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    ||||||||||| ||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||| ||||    
T  39715734 tgttctctctttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttatttt 39715809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 53591469 - 53591559
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||| | |||||| |||||||||| |||||||||||||| |||| | ||||||||| |||||| |||||| ||| ||| |||||||||    
T  53591469 tctctcgctgttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgattatcccttgttccacacatcaa 53591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 32219354 - 32219467
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||||| |||||| |||  |    
T  32219354 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgct 32219453  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  32219454 ccacacatcaagtt 32219467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 51943659 - 51943752
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||| |||||||||||||||||| || | ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  51943659 tctctcgctgttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttgactatcccttgctccacacatcaagtt 51943752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 18096888 - 18096775
Alignment:
Q  3 tgttctctcttcctttctctctcg---ttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttat 98  Q
    |||||||||||| |||||||||||   || ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||      
T  18096888 tgttctctcttc-tttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgc 18096790  T
Q  99 tctacacatcaagtt 113  Q
    || ||||||||||||    
T  18096789 tccacacatcaagtt 18096775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 43421403 - 43421323
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||| |||||||| |  | |||| |||||||| |||||||||||||||||| |||| ||||||||||| ||||||    
T  43421403 tgttctctcttcttttctctcgc--tgttttatacttttggcttgtgtttataattgttccatacactttgttttggttgctt 43421323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 45883239 - 45883322
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| || |||||| ||||||||||| |||| ||||||||||| |||||||| |||| |||  || ||||||||||||    
T  45883239 ttttctacttctggcttgtgattataattgttccatacactttgttttggttgcttaactatcccttgctccacacatcaagtt 45883322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 51674754 - 51674691
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcata 66  Q
    |||||||||||| ||||||||||| | ||||||||||||| |||||||||||| ||||| ||||    
T  51674754 tgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttatatttgttccata 51674691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Complemental strand, 8183097 - 8183031
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcactt 96  Q
    |||||||||||||||||||||||||||||||| |||| || || ||||| |||||| | ||||||||    
T  8183097 ttttctacttttgacttgtgtttataattgttccatacaccttattttggttgcttgactatcactt 8183031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 110
Target Start/End: Original strand, 18162961 - 18163042
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||| || |||||||||    
T  18162961 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaa 18163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 24980007 - 24980091
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||||||||||||||| |||| |||||| ||||| |||| | |||||| |||  || ||||||||||||    
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtt 24980091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 36012096 - 36012208
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||  |||||||||||||||||| |||| ||||||||||| ||| || |||||| |||  ||    
T  36012096 tgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgattatcccttgctc 36012195  T
Q  101 tacacatcaagtt 113  Q
     | ||||||||||    
T  36012196 catacatcaagtt 36012208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 43228560 - 43228671
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||||||| ||||| | ||| ||||||| ||||| ||||| ||| |||||||| |||| ||||||||||| |||||| |||||| |||  ||    
T  43228560 tgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgattatctcttgctc 43228658  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  43228659 cacacatcaagtt 43228671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 47701645 - 47701569
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcactt 96  Q
    |||||| || ||||||||||||| |||||||| ||||||||| |||| ||||||||||  |||||| ||||| ||||    
T  47701645 tctctcattgttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgattattactt 47701569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 28101990 - 28101940
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgttta 53  Q
    |||||||||||||||||||||||| | |||||||||||||  |||||||||    
T  28101990 tgttctctcttcctttctctctcgctgttttctacttttgggttgtgttta 28101940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4308269 - 4308192
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttg 78  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||| ||||||||||| |||| |||||||||||    
T  4308269 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttg 4308192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 10955986 - 10955900
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  10955986 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 10955900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 880439 - 880354
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaatta 90  Q
    |||||||||||| |||||||| |  | |||||||||||||  ||||| |||||| |||| |||| ||||||||||| |||||| ||||    
T  880439 tgttctctcttcttttctctcgc--tgttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgatta 880354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 5191954 - 5192035
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  5191954 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 5192035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 18099129 - 18099045
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||||||| ||||||| |||| |||||| ||||  |||||| |||||| |||  || ||||||||||||    
T  18099129 ttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgctccacacatcaagtt 18099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 25688148 - 25688035
Alignment:
Q  3 tgttctctcttcctttctctctcgtta---ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttat 98  Q
    |||||||||||||||| |||||||||    ||||||||||||| |||||||||| ||||||| |||| |||||| ||||| |||  | ||||||||||      
T  25688148 tgttctctcttccttt-tctctcgttgatgttttctacttttggcttgtgtttacaattgttccatacactttgattttggttgtctgattatcacttgc 25688050  T
Q  99 tctacacatcaagtt 113  Q
    || |||||| |||||    
T  25688049 tccacacataaagtt 25688035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 6063404 - 6063317
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  ||||||  ||||| ||||| ||||||||||||| ||| ||| ||||||||||||    
T  6063404 cgttgttttctacttttggcttgtatttataact--ttcatacgctttgattttggttgcttaattatcccttgttccacacatcaagtt 6063317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 6065754 - 6065667
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| |||||| ||||| ||||||||||||| |||  || ||||||||||||    
T  6065754 cgttgttttctacttttggcttgtatttataact--ttcatacactttgattttggttgcttaattatcccttgctccacacatcaagtt 6065667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 27101169 - 27101087
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgc 83  Q
    |||||||||||||||| ||||  | ||| ||||||||||||  |||||| ||||||||||| |||| ||||||||||| ||||    
T  27101169 tgttctctcttccttttctcttgctgttgttttctactttttgcttgtgattataattgttccatacactttgttttggttgc 27101087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 456206 - 456292
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  ||||||  |||||||||| |||||| |||||| |||  || ||||||||||||    
T  456206 cgttgttttctacttttggcttgtatttataact--ttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagtt 456292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 458583 - 458669
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  ||||||  |||||||||| |||||| |||||| |||  || ||||||||||||    
T  458583 cgttgttttctacttttggcttgtatttataact--ttcatacgctttgttttggttgcttgattatcccttgctccacacatcaagtt 458669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 1321777 - 1321863
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||| | |||||| |||  || ||||||||||||    
T  1321777 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcctgattatcccttgctccacacatcaagtt 1321863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 10084348 - 10084262
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||  |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  10084348 cgttgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 10084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 10191271 - 10191185
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||  |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  10191271 cgttgttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 10191185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 10958282 - 10958196
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||||||  ||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  10958282 cgttgttttctacttttggcttgtattta--attgttctatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 10958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 43226352 - 43226461
Alignment:
Q  3 tgttctctcttcctttctctctcgttatt--ttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattc 100  Q
    |||||||||||||||| ||||||| | ||  ||||||||||| ||||| ||| |||||||| |||| |||| |||||| |||||| |||||| |||  ||    
T  43226352 tgttctctcttccttt-tctctcgctgttgtttctacttttggcttgtattt-taattgttccatacactt-gttttggttgcttgattatctcttgctc 43226448  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  43226449 cacacatcaagtt 43226461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 50494297 - 50494383
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  ||| || ||||  |||||||||| ||||||||||||| |||  || ||||||||||||    
T  50494297 cgttgttttctacttttggcttgtattta--attattccatacgctttgttttggttgcttaattatctcttgctccacacatcaagtt 50494383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 113
Target Start/End: Complemental strand, 9604585 - 9604481
Alignment:
Q  10 tcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatc 108  Q
    ||||| |||||||| | ||| ||||||| ||||| | |||| |||||||||||||||| |||||| |||| || ||| |||||  |||  || |||||||    
T  9604585 tcttcttttctctcgctgttgttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgattattccttgctccacacatc 9604486  T
Q  109 aagtt 113  Q
    |||||    
T  9604485 aagtt 9604481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 10621488 - 10621400
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttg--ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||||| |  |||||| ||||||  ||||| ||||||||||||| |||  || ||||||||||||    
T  10621488 cgttgttttctacttttggcttgtatttataact--ttcatacactttggtttttggttgcttaattatcccttgctccacacatcaagtt 10621400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 111
Target Start/End: Complemental strand, 28761412 - 28761324
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaag 111  Q
    ||||||||| ||||||||||||| |||||| |||||||  || |||| ||||| ||||| ||| || ||||||||||  || ||||||||||    
T  28761412 tctctcgttgttttctacttttg-cttgtgattataat--ttccatacactttattttggttgtttgattatcacttgctccacacatcaag 28761324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 15346670 - 15346778
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| ||||||||   ||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||| |||||||||| ||| |    
T  15346670 tgttctctctttctttctctt--gttgttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgattatcacttgttcca 15346767  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  15346768 cacatcaagtt 15346778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 115 - 200
Target Start/End: Original strand, 27612711 - 27612796
Alignment:
Q  115 ttaccgcaatattctcttttcttcttattttaccctgtaattatttcatggcaccaacccaccactctgctccatgtcatatatgc 200  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||||    
T  27612711 ttactgcaatattctctttgcttcttattttaccctgtaattgtttcatggcacccacccatcactctgccccatgtcatatatgc 27612796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 3631929 - 3631819
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||| ||||||||||| ||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||| ||||||||||||  || |    
T  3631929 tgttatctcttcctttttctctcgatgttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcctaattatcacttgctcca 3631830  T
Q  103 cacatcaagtt 113  Q
    ||| |||||||    
T  3631829 cacgtcaagtt 3631819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 1069710 - 1069626
Alignment:
Q  1 tatgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgctt 85  Q
    |||||||||||||| ||||||||||| | ||||||||||||  |||||||||||||||||| |||| ||||||||||||||||||    
T  1069710 tatgttctctcttcttttctctctcgctgttttctactttttgcttgtgtttataattgttccatacactttgttttgattgctt 1069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 30728814 - 30728704
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||| ||||||||||| ||| || | |||| |||  || |    
T  30728814 tgttatctcttcctttctctctcgctgttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttgactatcccttgctcca 30728715  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  30728714 cacatcaagtt 30728704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 15367355 - 15367463
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattcta 102  Q
    ||||||||||| |||||||||  ||  ||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||| |||||||| |  || |    
T  15367355 tgttctctctttctttctctc--gtatttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcacatgctcca 15367452  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  15367453 cacatcaagtt 15367463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 3394695 - 3394765
Alignment:
Q  7 ctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgtttt 77  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||    
T  3394695 ctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtttt 3394765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 110
Target Start/End: Original strand, 25480219 - 25480309
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaa 110  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||| ||||| ||||| |||||  | |||| |||| ||||||||||||    
T  25480219 tctctcgctgttttctacttttgacttgtgattataattgtttcatacactttattttggttgctcgactatcccttactctacacatcaa 25480309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 24338423 - 24338330
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| |||||||||||||  ||||||||||||||||| |||| ||||||||||| |||||| | |||| |||  || ||||||||||||    
T  24338423 tctctcgttgttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgactatctcttgctccacacatcaagtt 24338330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 3629855 - 3629746
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctactttt-gacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattct 101  Q
    |||||||||||| ||||||||  ||| |||||||||||| | |||||||||||||||||| |||| ||||||||||| |||||| ||||||  ||  ||     
T  3629855 tgttctctcttcttttctctc--gttgttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgattatcctttgctcc 3629758  T
Q  102 acacatcaagtt 113  Q
    ||||||||||||    
T  3629757 acacatcaagtt 3629746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 3233715 - 3233605
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttatt 99  Q
    |||||||||||||||| ||||| | ||| |||||||||||||  |||||||||||||||||||||  |||||| ||||| |||| | ||||||||||| |    
T  3233715 tgttctctcttccttttctctcgctgttgttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgattatcacttact 3233616  T
Q  100 ctacacatcaa 110  Q
    | |||||||||    
T  3233615 ccacacatcaa 3233605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 32280321 - 32280379
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||||||    
T  32280321 tgttctctcttcctttctctcatgttattttctacttttggcttgtatttataattgtt 32280379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 9020250 - 9020363
Alignment:
Q  3 tgttctctcttcctttctctctcg---ttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttatt 99  Q
    ||||||||||||| || |||||||   || ||||||||||||| ||||| |||||||||||| |||| ||||||||||| |||  | |||||| |||  |    
T  9020250 tgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttgttttggttgtctgattatctcttgct 9020349  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  9020350 ccacacatcaagtt 9020363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 11983019 - 11982906
Alignment:
Q  3 tgttctctcttcctttctctctcg---ttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttatt 99  Q
    |||||||||||| ||| |||||||   || ||||||||||||| |||||| || |||||||| |||| ||||||||||| |||||| |||||  |||  |    
T  11983019 tgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgattattccttgct 11982920  T
Q  100 ctacacatcaagtt 113  Q
    | ||||||||||||    
T  11982919 ccacacatcaagtt 11982906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 12161548 - 12161498
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgttta 53  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  12161548 tgttctctcttcctttctctctcgctgttttctacttttgtcttgtgttta 12161498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 28241282 - 28241196
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| |||||||||||||||||| |||||| |||  || ||||||||||||    
T  28241282 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagtt 28241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 4816186 - 4816105
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||||||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  4816186 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 4816105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 14507137 - 14507051
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  14507137 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 14507051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 201
Target Start/End: Original strand, 27692245 - 27692304
Alignment:
Q  142 ttttaccctgtaattatttcatggcaccaacccaccactctgctccatgtcatatatgca 201  Q
    ||||||||| |||| ||||||| ||||| ||||| |||||||| || |||||||||||||    
T  27692245 ttttaccctttaataatttcatagcacccacccatcactctgccccctgtcatatatgca 27692304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 3027842 - 3027791
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataa 56  Q
    ||||||||||| |||||||||  ||| ||||||||||||||||||| |||||||    
T  3027842 tgttctctctttctttctctc--gttgttttctacttttgacttgtatttataa 3027791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 12937184 - 12937128
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtt 61  Q
    |||||| |||| |||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  12937184 tgttctatctttcttt-tctctcgttgttttctacttttg-cttgtgtttataattgtt 12937128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 1230210 - 1230123
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| |||| |||||||| ||| ||| | ||||||||||||| ||||| ||||| |||||| |||||| |||  || ||||||||||||    
T  1230210 cgttgttttatacttttggctt-tgtatttaattgtttcatacactttattttggttgcttgattatctcttgatccacacatcaagtt 1230123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 12186061 - 12186000
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcata 66  Q
    ||||||||||| ||||||||| |  | ||||||||||||  |||||||||||||||||| ||||    
T  12186061 tgttctctctttctttctctcgc--tgttttctactttttccttgtgtttataattgttccata 12186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 20915312 - 20915227
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagttatta 117  Q
    ||||||||||||| ||||| ||||  ||| ||||||| ||||||||||| |||||| |||| | |||   | ||||||||||||||||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgattaccccttgccccacacatcaagttatta 20915227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 26932518 - 26932437
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||| |||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  26932518 ttttctacctttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 26932437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 50325 - 50422
Alignment:
Q  16 tttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  50325 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 50422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 52324 - 52421
Alignment:
Q  16 tttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  52324 tttctctctagttgttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 52421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 85529 - 85597
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataattgtttcatatactttg 73  Q
    |||||||||||| ||||||||  ||| |||||||||||||||||||||||||||||||| |||| ||||||    
T  85529 tgttctctcttcttttctctc--gttgttttctacttttgacttgtgtttataattgttccatacactttg 85597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 4309 - 4402
Alignment:
Q  20 tctctcgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||| | ||||||||||||| ||||||||||||||| ||  ||| ||||  |||||||||||| |||||| |||| || ||||||||||||    
T  4309 tctctcgctgttttctacttttggcttgtgtttataattattctatacacttcattttgattgcttgattatcccttactccacacatcaagtt 4402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 35892 - 36004
Alignment:
Q  3 tgttctctcttcctttctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattc 100  Q
    |||||||||||| |||||||| | ||| ||||| | ||||| ||||||||||||||||||||||| |||||| ||||| |||||| | |||| |||  ||    
T  35892 tgttctctcttcttttctctcgctgttgttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttgactatcccttgctc 35991  T
Q  101 tacacatcaagtt 113  Q
     ||||||||||||    
T  35992 cacacatcaagtt 36004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 41444 - 41358
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| |||||||||||||||||| |||||| |||  || ||||||||||||    
T  41444 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgattatctcttgctccacacatcaagtt 41358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 79512 - 79596
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| |||||| ||||||||||| |||| |||||| ||||| |||| |||||||| |||  || ||||||||||||    
T  79512 ttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgctccacacatcaagtt 79596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 113
Target Start/End: Original strand, 29497 - 29583
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||| | ||||  |||||| |||| |||||||||||||||||| |||||| |||  || ||||||||||||    
T  29497 cgttgttttctacttttggcttttattta--attgttccatacactttgttttgattgcttgattatcccttgctccacacatcaagtt 29583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 1408 - 1327
Alignment:
Q  30 ttttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttgttttggttgcttgattatctcttgctccacacatcaagtt 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 11463 - 11349
Alignment:
Q  3 tgttctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactt--tgttttgattgcttaattatcacttat 98  Q
    |||||||||||| ||| ||||| | ||| ||||||||||||| |||||| ||||||||||| |||| ||||  | ||||  ||||||||||||  ||||     
T  11463 tgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttattttttcgttgcttaattattccttac 11364  T
Q  99 tctacacatcaagtt 113  Q
    || ||||||||||||    
T  11363 tccacacatcaagtt 11349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 80160 - 80270
Alignment:
Q  6 tctctcttccttt-ctctctc-gttattttctacttttgacttgtgtttataattgtttcatatactttg-ttttgattgcttaattatcacttattcta 102  Q
    ||||||||||||| ||||| | ||| ||||||||||||| ||||||||||||||| || |||| |||||| ||||  |||| | ||||| ||||  || |    
T  80160 tctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgctcca 80259  T
Q  103 cacatcaagtt 113  Q
    |||||||||||    
T  80260 cacatcaagtt 80270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 113
Target Start/End: Complemental strand, 1412 - 1326
Alignment:
Q  25 cgttattttctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||| ||||||||||||| ||||| ||||  |||||| |||| ||||||||||| |||||| ||||||  ||  || ||||||||||||    
T  1412 cgttgttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgattatctttttctccacacatcaagtt 1326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 1632 - 1580
Alignment:
Q  3 tgttctctcttcctttctctctcgttattttctacttttgacttgtgtttataa 56  Q
    ||||||||||| |||| |||||| || ||||||||||||| |||||||||||||    
T  1632 tgttctctctttcttt-tctctcattgttttctacttttggcttgtgtttataa 1580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 12827 - 12749
Alignment:
Q  33 tctacttttgacttgtgtttataattgtttcatatactttgttttgattgcttaattatcacttattctacacatcaagtt 113  Q
    |||||||||| ||||| ||||||| |  |||||| ||||||||||| |||||| |||||| |||  || ||||||||||||    
T  12827 tctacttttggcttgtatttataact--ttcatacactttgttttggttgcttgattatcccttgctccacacatcaagtt 12749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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