View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4982_low_15 (Length: 228)
Name: NF4982_low_15
Description: NF4982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4982_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 32856166 - 32856328
Alignment:
| Q |
1 |
tctatttcgaatctaacagtttccctaaattagataccactgatgagagagggttggatagctcttgctttgagttaagagagaaagagttgggggttct |
100 |
Q |
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| T |
32856166 |
tctatttctaatctaacattttccccaaattagaaaccacggatgagagagggttggatagctcttgctttgagttaagagagaaagagttgggggttct |
32856265 |
T |
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| Q |
101 |
gggttcgaacgtggacaaagaaatagatctaaatttaacaactaattactaacctttgtcatt |
163 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32856266 |
gggttcgaacgtggacagagaaatagatctaaatttaacaactaattactaacctttgtcatt |
32856328 |
T |
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Target: chr2 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 10223426 - 10223394
Alignment:
| Q |
132 |
aatttaacaactaattactaacctttgtcatta |
164 |
Q |
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|||||||||||||||||||||| |||||||||| |
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| T |
10223426 |
aatttaacaactaattactaacatttgtcatta |
10223394 |
T |
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