View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4982_low_8 (Length: 283)
Name: NF4982_low_8
Description: NF4982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4982_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 42 - 266
Target Start/End: Complemental strand, 36465017 - 36464797
Alignment:
| Q |
42 |
atgtgggaaaatgaacaaaatcaaccaagcatgggagacataaattcactttgacttgtcattatggtacatttttgtagccgagaagcggaaaatataa |
141 |
Q |
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| T |
36465017 |
atgtgggaaaatgaacaaaatcaaccaggcgtgggagacataaattcactttgacttgtcattatggtacatttttgtagccgagaagcggaaaatataa |
36464918 |
T |
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| Q |
142 |
agtattctgcggttaagcttcgattgctcaattaaggaaggatatgccactactatgatgagagtagagacattcttggttaagagagtgagagttggag |
241 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36464917 |
agtattctgcggttaagcttcgattgctcaatta----aggatatgccactactatgatgagagtagagacattcttggttaagagagtgagagttggag |
36464822 |
T |
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| Q |
242 |
gagttagtgagagaatgtaaaagag |
266 |
Q |
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|||||||||||||||||| |||||| |
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| T |
36464821 |
gagttagtgagagaatgtgaaagag |
36464797 |
T |
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