View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4983_high_5 (Length: 300)

Name: NF4983_high_5
Description: NF4983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4983_high_5
NF4983_high_5
[»] chr4 (19 HSPs)
chr4 (15-79)||(32212731-32212795)
chr4 (89-148)||(32212826-32212885)
chr4 (89-150)||(25479638-25479699)
chr4 (15-79)||(45047162-45047226)
chr4 (89-148)||(26417139-26417198)
chr4 (89-147)||(6078046-6078104)
chr4 (89-147)||(8757312-8757370)
chr4 (89-148)||(29628066-29628125)
chr4 (89-148)||(36219012-36219071)
chr4 (21-79)||(25479730-25479788)
chr4 (19-79)||(8757410-8757470)
chr4 (15-79)||(22702329-22702393)
chr4 (15-79)||(22991724-22991788)
chr4 (93-133)||(26698962-26699002)
chr4 (47-76)||(1586470-1586499)
chr4 (21-78)||(17694404-17694461)
chr4 (19-56)||(29627971-29628008)
chr4 (18-79)||(41248359-41248416)
chr4 (92-148)||(54998073-54998129)
[»] chr7 (12 HSPs)
chr7 (19-81)||(33815974-33816036)
chr7 (19-79)||(25795868-25795928)
chr7 (15-79)||(42710528-42710592)
chr7 (89-148)||(958136-958195)
chr7 (92-145)||(33881981-33882034)
chr7 (15-79)||(9486856-9486920)
chr7 (44-76)||(17603886-17603918)
chr7 (100-148)||(17603963-17604010)
chr7 (45-79)||(33174126-33174160)
chr7 (102-143)||(36655605-36655646)
chr7 (89-148)||(37503817-37503877)
chr7 (89-148)||(44484126-44484186)
[»] chr1 (22 HSPs)
chr1 (15-79)||(42483748-42483812)
chr1 (21-79)||(33603493-33603551)
chr1 (101-148)||(7712366-7712414)
chr1 (19-79)||(32913876-32913936)
chr1 (89-148)||(33259571-33259631)
chr1 (89-148)||(33279730-33279790)
chr1 (89-131)||(37583179-37583221)
chr1 (15-81)||(42401016-42401082)
chr1 (46-79)||(7789729-7789762)
chr1 (23-79)||(7712267-7712323)
chr1 (23-79)||(8444942-8444998)
chr1 (25-76)||(32544976-32545027)
chr1 (17-79)||(20360335-20360396)
chr1 (17-79)||(20550574-20550635)
chr1 (89-142)||(42400942-42400996)
chr1 (46-79)||(5114085-5114118)
chr1 (100-148)||(5827460-5827509)
chr1 (27-79)||(31206390-31206443)
chr1 (23-76)||(43384011-43384064)
chr1 (43-79)||(5041029-5041065)
chr1 (15-79)||(31827170-31827234)
chr1 (89-148)||(35615632-35615692)
[»] chr8 (3 HSPs)
chr8 (21-79)||(1421895-1421953)
chr8 (89-148)||(10287958-10288017)
chr8 (41-81)||(9415517-9415557)
[»] chr3 (11 HSPs)
chr3 (15-73)||(48457937-48457995)
chr3 (89-148)||(377026-377086)
chr3 (15-81)||(24744454-24744520)
chr3 (15-79)||(7885974-7886037)
chr3 (45-79)||(53143559-53143593)
chr3 (89-148)||(48457848-48457908)
chr3 (89-146)||(7885885-7885943)
chr3 (89-145)||(31720290-31720347)
chr3 (89-134)||(45707578-45707623)
chr3 (89-148)||(17378688-17378748)
chr3 (19-79)||(45707654-45707714)
[»] chr2 (10 HSPs)
chr2 (23-77)||(27974540-27974594)
chr2 (23-77)||(28061069-28061123)
chr2 (89-143)||(39445786-39445840)
chr2 (89-148)||(11512056-11512116)
chr2 (19-79)||(18379873-18379933)
chr2 (15-79)||(45154324-45154388)
chr2 (23-74)||(27974472-27974523)
chr2 (23-74)||(28061001-28061052)
chr2 (15-79)||(39445871-39445935)
chr2 (21-67)||(4633951-4633997)
[»] chr6 (4 HSPs)
chr6 (19-76)||(24141400-24141457)
chr6 (15-79)||(11703212-11703276)
chr6 (29-79)||(31632376-31632426)
chr6 (102-145)||(31632470-31632514)
[»] chr5 (11 HSPs)
chr5 (15-79)||(30471755-30471819)
chr5 (89-150)||(33494864-33494925)
chr5 (15-79)||(36974175-36974239)
chr5 (15-78)||(4942457-4942520)
chr5 (20-73)||(38037388-38037441)
chr5 (22-79)||(39955160-39955217)
chr5 (44-79)||(5367720-5367755)
chr5 (89-150)||(4942552-4942614)
chr5 (89-150)||(13417395-13417457)
chr5 (104-150)||(36974284-36974330)
chr5 (46-79)||(33494800-33494833)
[»] scaffold0092 (1 HSPs)
scaffold0092 (20-79)||(4863-4922)
[»] scaffold0040 (1 HSPs)
scaffold0040 (94-136)||(55905-55948)
[»] scaffold0067 (1 HSPs)
scaffold0067 (44-76)||(283-315)


Alignment Details
Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 32212731 - 32212795
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||    
T  32212731 agaccctctaacaaaaggtctaaatgggtcccaccaataactctttatcatttacatttcaacaa 32212795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 32212826 - 32212885
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  32212826 aagtggtgtgaggtctacttaagaatgaggtcttaagtgagaccctgggtcttaagagac 32212885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 25479699 - 25479638
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagactc 150  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  25479699 aagtggtgtgagatccacttaagaatggggtcttaagtgaaaccttgggtcttaagagactc 25479638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 45047162 - 45047226
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||||| ||||   | |||||||||| |||||||||||||||||||||||||    
T  45047162 agaccctctaacaaaatgtttaaatgagacccaccaatagctctttatcatttacatttcaacaa 45047226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 26417198 - 26417139
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||| || |||||||||||    
T  26417198 aagtggtgtggggttcacttaagattggggtcttaagtgagaccccgggtcttaagagac 26417139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Original strand, 6078046 - 6078104
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagaga 147  Q
    ||||| ||||||||||||||||||||  | |||||||||||||||||| ||||||||||    
T  6078046 aagtgttgtgaggtccacttaagaatatgatcttaagtgagaccctgggtcttaagaga 6078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 147
Target Start/End: Complemental strand, 8757370 - 8757312
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagaga 147  Q
    |||||||||||| | || ||||||||| ||||||||||||||| |||||||||||||||    
T  8757370 aagtggtgtgagattcagttaagaatgaggtcttaagtgagactctggatcttaagaga 8757312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 29628066 - 29628125
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||||||||||| | ||||||||||||| ||||||||  |||||||||||    
T  29628066 aagtggtgtggggtccacttaaaattggggtcttaagtaagaccctgagtcttaagagac 29628125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 36219071 - 36219012
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||||||||||||| |||||  |||||| ||||| |||||||||||||||    
T  36219071 aagtggtgtggggtccacttaagattgggggtttaagttagaccttggatcttaagagac 36219012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 25479788 - 25479730
Alignment:
Q  21 tctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||| ||||    |||| ||||||||||||||||||||||||||||||||    
T  25479788 tctaacaaaatgtataaatgactccctccaataactctttatcatttacatttcaacaa 25479730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 8757470 - 8757410
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||| |||||||||||||  | || || |||||||| ||||||||||||||||||||||    
T  8757470 cctctaccaaaatgtctaaatggatcacatcaataactttttatcatttacatttcaacaa 8757410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 22702329 - 22702393
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| |||||||||||||||||||  || | | ||||||||||||||||||||| |||| |||||    
T  22702329 agactctctaacaaaatgtctaaatgggactcgccaataactctttatcatttatattttaacaa 22702393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 22991788 - 22991724
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| |||||||||||||||||||  || | | ||||||||||||||||||||| |||| |||||    
T  22991788 agactctctaacaaaatgtctaaatgggactcgccaataactctttatcatttatattttaacaa 22991724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 133
Target Start/End: Complemental strand, 26699002 - 26698962
Alignment:
Q  93 ggtgtgaggtccacttaagaatggggtcttaagtgagaccc 133  Q
    ||||||||  |||||||||||||||||||||||||||||||    
T  26699002 ggtgtgagtcccacttaagaatggggtcttaagtgagaccc 26698962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 76
Target Start/End: Complemental strand, 1586499 - 1586470
Alignment:
Q  47 accaataactctttatcatttacatttcaa 76  Q
    ||||||||||||||||||||||||||||||    
T  1586499 accaataactctttatcatttacatttcaa 1586470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 17694461 - 17694404
Alignment:
Q  21 tctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaaca 78  Q
    |||||||||| |||||||  |||| ||||| |||||||| |||||||||||| |||||    
T  17694461 tctaacaaaaggtctaaatcggtctcaccactaactcttcatcatttacattccaaca 17694404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 29627971 - 29628008
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataact 56  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  29627971 cctctatcaaaatgtctaaataggtcccaccaataact 29628008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 41248416 - 41248359
Alignment:
Q  18 ccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||| |||||||  ||||||||     ||||||||||||||||||||||||||    
T  41248416 ccctctaacaaaaggtctaaatgggtcccac----tactctttatcatttacatttcaacaa 41248359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 54998129 - 54998073
Alignment:
Q  92 tggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||||| | ||||||||||| |  ||||||||||||||||| || |||||||||||    
T  54998129 tggtgtgggttccacttaagattaaggtcttaagtgagaccccgggtcttaagagac 54998073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 33815974 - 33816036
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaata 81  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  33815974 cctctaacaaaatgtctaaaccggtcccaccactaactcttcatcatttacatttcaacaata 33816036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 25795868 - 25795928
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||| |||||||  |  ||||||||||||||||||||||||||||||||||||    
T  25795868 cctctaacaaaaggtctaaatggaacccaccaataactctttatcatttacatttcaacaa 25795928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 42710528 - 42710592
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||||| |||||||   | || |||||||||||||||||||||||||||||||||    
T  42710528 agaccctctaacaaaaggtctaaatgagaccaaccaataactctttatcatttacatttcaacaa 42710592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 958136 - 958195
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||| ||||| ||||||||||||| ||||||||||||| ||||||||| |||||||||||    
T  958136 aagttgtgtgtggtccacttaagattggggtcttaagttagaccctgggtcttaagagac 958195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 33882034 - 33881981
Alignment:
Q  92 tggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaaga 145  Q
    ||||||| | ||||||||| | ||||||||||||| ||||||||||||||||||    
T  33882034 tggtgtgggatccacttaaaattggggtcttaagttagaccctggatcttaaga 33881981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 9486856 - 9486920
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||| ||||||||||||||||   |   |||||||||||||||||||||||||||| |||||    
T  9486856 agaccctataacaaaatgtctaaatgagctacaccaataactctttatcatttacattttaacaa 9486920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 17603886 - 17603918
Alignment:
Q  44 cccaccaataactctttatcatttacatttcaa 76  Q
    |||||||||||||||||||||||||||||||||    
T  17603886 cccaccaataactctttatcatttacatttcaa 17603918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 17603963 - 17604010
Alignment:
Q  100 ggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||    
T  17603963 ggtccacttaagaatggagtcttaagtgagaccc-gggtcttaagagac 17604010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 33174126 - 33174160
Alignment:
Q  45 ccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||||||| |||||||||||||    
T  33174126 ccaccaataactctttatcatatacatttcaacaa 33174160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 143
Target Start/End: Complemental strand, 36655646 - 36655605
Alignment:
Q  102 tccacttaagaatggggtcttaagtgagaccctggatcttaa 143  Q
    |||||||||| ||| ||||||||||||||| |||||||||||    
T  36655646 tccacttaagcatgaggtcttaagtgagactctggatcttaa 36655605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 37503877 - 37503817
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| | ||||||||||| ||||| |||||||||||||| ||  |||||||||||    
T  37503877 aagtggtgtgggatccacttaagattgggggtcttaagtgagaccatgtgtcttaagagac 37503817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 44484126 - 44484186
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| | ||||||||||| ||||| |||||||| ||||| ||| |||||||||||    
T  44484126 aagtggtgtgggatccacttaagactgggggtcttaagttagaccttgggtcttaagagac 44484186  T

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Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 42483748 - 42483812
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||| |||||   ||||||||||||||||| |||||||||||||||||||||    
T  42483748 agaccctctaacaaaatatctaactgggtcccaccaataactcattatcatttacatttcaacaa 42483812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 33603493 - 33603551
Alignment:
Q  21 tctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||| ||||  ||||  |||||||||||||||||||||||||||||||||    
T  33603493 tctaacaaaatgtttaaatgggtcataccaataactctttatcatttacatttcaacaa 33603551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 7712366 - 7712414
Alignment:
Q  101 gtccacttaagaat-ggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  7712366 gtccacttaagaattggggtcttaagtgagaccctgggtcttaagagac 7712414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 32913936 - 32913876
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||| |  ||||  |||||||| ||||||||||||||||||||||||||||||    
T  32913936 cctctaacaaaaagcttaaatgggtcccactaataactctttatcatttacatttcaacaa 32913876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 33259571 - 33259631
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||||||||||||||||||| || |||||||||||| || |||||||||||    
T  33259571 aagtggtgtggggtccacttaagaatggggatcataagtgagaccccgggtcttaagagac 33259631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 33279730 - 33279790
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||||||||||||||||||| || |||||||||||| || |||||||||||    
T  33279730 aagtggtgtggggtccacttaagaatggggatcataagtgagaccccgggtcttaagagac 33279790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 37583179 - 37583221
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagac 131  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  37583179 aagtagtgtgaggtccacttaaaaatggggtcttaagtgagac 37583221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 42401082 - 42401016
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaata 81  Q
    ||||||||| |||||| |||||||  ||||||||||  ||||||| |||||||||||| ||||||||    
T  42401082 agaccctctgacaaaaggtctaaatcggtcccaccacgaactcttcatcatttacattccaacaata 42401016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 7789762 - 7789729
Alignment:
Q  46 caccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||    
T  7789762 caccaataactctttatcatttacatttcaacaa 7789729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 7712267 - 7712323
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||  | || || |||||||| ||||||||||||||||||||||    
T  7712267 taacaaaatgtctaaatggatctcaacaataactttttatcatttacatttcaacaa 7712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 8444998 - 8444942
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||| ||||||| | ||| || |||||||||||||| ||||||||||||||||    
T  8444998 taacaaaaggtctaaataagtctcatcaataactctttattatttacatttcaacaa 8444942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 76
Target Start/End: Complemental strand, 32545027 - 32544976
Alignment:
Q  25 acaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaa 76  Q
    ||||||||||||||  ||||| || ||||||||||||| |||||||||||||    
T  32545027 acaaaatgtctaaatgggtcctactaataactctttattatttacatttcaa 32544976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 20360335 - 20360396
Alignment:
Q  17 accctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||||||||  |||| ||  || || ||||||||||||||||||||||||    
T  20360335 accctctaacaaaatgtctaaatcggtcacattaa-aattctttatcatttacatttcaacaa 20360396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 20550635 - 20550574
Alignment:
Q  17 accctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||||||||  |||| ||  || || ||||||||||||||||||||||||    
T  20550635 accctctaacaaaatgtctaaatcggtcacattaa-aattctttatcatttacatttcaacaa 20550574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 42400996 - 42400942
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatg-gggtcttaagtgagaccctggatctta 142  Q
    |||| ||||| |||||||||||||||  ||||||||||||||||||||| |||||    
T  42400996 aagtagtgtggggtccacttaagaataagggtcttaagtgagaccctgggtctta 42400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 5114085 - 5114118
Alignment:
Q  46 caccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||| |||||||||||||||||||    
T  5114085 caccaataactcttcatcatttacatttcaacaa 5114118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 5827509 - 5827460
Alignment:
Q  100 ggtccacttaagaat-ggggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||||||||||| | |||||||||||||||||||||  |||||||||||    
T  5827509 ggtccacttaagatttggggtcttaagtgagaccctgagtcttaagagac 5827460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 31206390 - 31206443
Alignment:
Q  27 aaaatgtctaaacaggtcccaccaataactc-tttatcatttacatttcaacaa 79  Q
    ||||||||||||  | ||||||||||||||| ||||||||||| ||||||||||    
T  31206390 aaaatgtctaaatggatcccaccaataactcttttatcatttatatttcaacaa 31206443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 76
Target Start/End: Original strand, 43384011 - 43384064
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaa 76  Q
    |||||||| |||||||  | ||||| ||||||||||| ||||||||||||||||    
T  43384011 taacaaaaagtctaaatggttcccaacaataactcttcatcatttacatttcaa 43384064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 5041029 - 5041065
Alignment:
Q  43 tcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  5041029 tcccaccaataactttttatcatttatatttcaacaa 5041065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 31827234 - 31827170
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| |||||||||||||||||||   ||| | | ||||| | ||||||||||||||||||||||    
T  31827234 agacactctaacaaaatgtctaaatgagtctctctaataattatttatcatttacatttcaacaa 31827170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 35615632 - 35615692
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatg-gggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| | ||||||||| |||| ||||||||||| ||||||| | |||||||||||    
T  35615632 aagtggtgtgggatccacttaaaaatgagggtcttaagtaagaccctaggtcttaagagac 35615692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 1421895 - 1421953
Alignment:
Q  21 tctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  1421895 tctaacacaatgtctaaatgggtcctaccaataactctttatcatttacatttcaacaa 1421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 10288017 - 10287958
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| |||||| |||||| ||||||||||||| ||| |||||||||||||||||    
T  10288017 aagtggtgtggggtccatttaagattggggtcttaagtaagatcctggatcttaagagac 10287958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 9415517 - 9415557
Alignment:
Q  41 ggtcccaccaataactctttatcatttacatttcaacaata 81  Q
    |||| ||||| |||||||| |||||||||||||||||||||    
T  9415517 ggtctcaccactaactcttcatcatttacatttcaacaata 9415557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 48457995 - 48457937
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacattt 73  Q
    |||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||    
T  48457995 agaccctctaacaaaaggtctaaatgggacccaccaataactctttatcatttacattt 48457937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 377086 - 377026
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatg-gggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||    
T  377086 aagtggtgtgaggtccacttaagaatgagagtcttaagtgagaccttgggtcttaagagac 377026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 24744454 - 24744520
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaata 81  Q
    |||||||||||||||| |||||||  | |||||||| |||||||| |||||||||||| ||||||||    
T  24744454 agaccctctaacaaaaggtctaaatcgatcccaccactaactcttcatcatttacattccaacaata 24744520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 7886037 - 7885974
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| |||||||||||||| ||||  |||| ||||||||||||||||||||||| ||||||||||    
T  7886037 agactctctaacaaaatgtttaaat-ggtctcaccaataactctttatcatttatatttcaacaa 7885974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 53143593 - 53143559
Alignment:
Q  45 ccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||||||||||||||||||||||||    
T  53143593 ccaccaataactctttatcatttacatttcaacaa 53143559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 48457908 - 48457848
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgg-ggtcttaagtgagaccctggatcttaagagac 148  Q
    |||| ||||||| ||||||||||||||  ||||||||||||||||| || |||||||||||    
T  48457908 aagttgtgtgagatccacttaagaatgaaggtcttaagtgagaccccgggtcttaagagac 48457848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 7885943 - 7885885
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgg-ggtcttaagtgagaccctggatcttaagag 146  Q
    |||| ||||| | ||||||||||||||| |||||||||||||||||||  |||||||||    
T  7885943 aagttgtgtgggatccacttaagaatggaggtcttaagtgagaccctgagtcttaagag 7885885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 145
Target Start/End: Original strand, 31720290 - 31720347
Alignment:
Q  89 aagtggtgtgaggtccacttaagaat-ggggtcttaagtgagaccctggatcttaaga 145  Q
    |||||||||| ||||||||||||| | |||||||||||| ||||||||  ||||||||    
T  31720290 aagtggtgtggggtccacttaagattgggggtcttaagttagaccctgagtcttaaga 31720347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 45707623 - 45707578
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccct 134  Q
    |||||||||||| ||||||||| |||| ||||||||||||| ||||    
T  45707623 aagtggtgtgagatccacttaaaaatgaggtcttaagtgaggccct 45707578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 17378688 - 17378748
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgg-ggtcttaagtgagaccctggatcttaagagac 148  Q
    ||||| |||| |||| |||||||||||| |||||||||||||| | ||| |||||||||||    
T  17378688 aagtgatgtggggtctacttaagaatggaggtcttaagtgagatcatgggtcttaagagac 17378748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 45707714 - 45707654
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||| ||| ||||  | | |||| || |||||||||||||||||||||||||||    
T  45707714 cctctaacaaattgtttaaatggtttccacaaacaactctttatcatttacatttcaacaa 45707654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 27974540 - 27974594
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaac 77  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  27974540 taacaaaatgtctaaataggtccaaccaataactctttatcatttacttttcaac 27974594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 77
Target Start/End: Original strand, 28061069 - 28061123
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaac 77  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||||||    
T  28061069 taacaaaatgtctaaataggtccaaccaataactctttatcatttacttttcaac 28061123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 143
Target Start/End: Complemental strand, 39445840 - 39445786
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaa 143  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  39445840 aagttgtgtggggtccacttaagaatggggtcttaagtgagaccccggatcttaa 39445786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 11512056 - 11512116
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagac 148  Q
    |||||||||| ||||||||||||| ||||| |||||||| ||||||||| |||||||||||    
T  11512056 aagtggtgtggggtccacttaagattgggggtcttaagttagaccctgggtcttaagagac 11512116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 18379933 - 18379873
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||| |||||||| ||| | || |||||||||||||||||||||| ||||||||||||    
T  18379933 cctctaataaaatgtcaaaatacgttccaccaataactctttatcattcacatttcaacaa 18379873  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 45154388 - 45154324
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||| ||| ||||||| ||||  | |||||||||||||||||||| ||||||||||||||||    
T  45154388 agaccctttaataaaatgtttaaatggatcccaccaataactctttattatttacatttcaacaa 45154324  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 27974472 - 27974523
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttc 74  Q
    ||||||||||||||||   |||| ||||||||||||||||||||||||||||    
T  27974472 taacaaaatgtctaaatgagtccaaccaataactctttatcatttacatttc 27974523  T

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Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Original strand, 28061001 - 28061052
Alignment:
Q  23 taacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttc 74  Q
    ||||||||||||||||   |||| ||||||||||||||||||||||||||||    
T  28061001 taacaaaatgtctaaatgagtccaaccaataactctttatcatttacatttc 28061052  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 39445935 - 39445871
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||| ||||||| || ||||  ||  |||||||||||||||||| ||||||||||||||||    
T  39445935 agaccctccaacaaaaggtttaaatgggatccaccaataactctttattatttacatttcaacaa 39445871  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 4633997 - 4633951
Alignment:
Q  21 tctaacaaaatgtctaaacaggtcccaccaataactctttatcattt 67  Q
    ||||| ||||||||||||  | |||||||||||||||||||||||||    
T  4633997 tctaataaaatgtctaaatggatcccaccaataactctttatcattt 4633951  T

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Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 24141457 - 24141400
Alignment:
Q  19 cctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaa 76  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||||    
T  24141457 cctctaacaaaatgtctaaatagaacccatcaataactctttatcatttacatttcaa 24141400  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 11703212 - 11703276
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||||||| |||||||   | |||||||||||||||||||||||||||||| |||||    
T  11703212 agaccctctaacaaaaggtctaaatgagacccaccaataactctttatcatttacattttaacaa 11703276  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 31632376 - 31632426
Alignment:
Q  29 aatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||  | || ||||||||||||||||||||||||||||||||||    
T  31632376 aatgtctaaatggttctcaccaataactctttatcatttacatttcaacaa 31632426  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 31632470 - 31632514
Alignment:
Q  102 tccacttaagaatgggg-tcttaagtgagaccctggatcttaaga 145  Q
    ||||||||||||||||| ||||||||| |||||||| ||||||||    
T  31632470 tccacttaagaatgggggtcttaagtgtgaccctgggtcttaaga 31632514  T

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Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 30471819 - 30471755
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| ||||||||||| |||||||  || |||||||||||||||||||||||||||||| |||||    
T  30471819 agacgctctaacaaaaggtctaaatgggacccaccaataactctttatcatttacatttaaacaa 30471755  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 33494864 - 33494925
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatggggtcttaagtgagaccctggatcttaagagactc 150  Q
    |||| ||||||| || ||||||||||||||||||||||||||| | || |||||||||||||    
T  33494864 aagttgtgtgagatctacttaagaatggggtcttaagtgagactccgggtcttaagagactc 33494925  T

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Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 36974175 - 36974239
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||| |||||||||| || | ||  ||| |||||||||||||||||||||||||||||||||||    
T  36974175 agaccttctaacaaaaggttttaatgggttccaccaataactctttatcatttacatttcaacaa 36974239  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 4942457 - 4942520
Alignment:
Q  15 agaccctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaaca 78  Q
    ||||||| |||||||| |||||||  |   ||||||||||||||||||||||||||||||||||    
T  4942457 agaccctttaacaaaaggtctaaatggaatccaccaataactctttatcatttacatttcaaca 4942520  T

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Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 73
Target Start/End: Complemental strand, 38037441 - 38037388
Alignment:
Q  20 ctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacattt 73  Q
    ||||||||||| || ||||  ||| |||||||||||||||||||||||||||||    
T  38037441 ctctaacaaaaagtttaaatgggttccaccaataactctttatcatttacattt 38037388  T

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Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 39955160 - 39955217
Alignment:
Q  22 ctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    |||||||||||| ||||  |||| ||||||||||| |||| |||||||||||||||||    
T  39955160 ctaacaaaatgtttaaatgggtctcaccaataactatttaccatttacatttcaacaa 39955217  T

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Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 5367755 - 5367720
Alignment:
Q  44 cccaccaataactctttatcatttacatttcaacaa 79  Q
    |||| |||||||||||||||||||||||||||||||    
T  5367755 cccatcaataactctttatcatttacatttcaacaa 5367720  T

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Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 4942552 - 4942614
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatg-gggtcttaagtgagaccctggatcttaagagactc 150  Q
    |||| ||||| |||||||||||||||| |||||||||||||||| |||| | |||| ||||||    
T  4942552 aagttgtgtggggtccacttaagaatgagggtcttaagtgagactctgggtattaaaagactc 4942614  T

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Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 150
Target Start/End: Original strand, 13417395 - 13417457
Alignment:
Q  89 aagtggtgtgaggtccacttaagaatgggg-tcttaagtgagaccctggatcttaagagactc 150  Q
    |||||||||| ||||||||||| | ||||| |||||||| ||||||||  |||||||||||||    
T  13417395 aagtggtgtggggtccacttaacattgggggtcttaagttagaccctgagtcttaagagactc 13417457  T

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Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 150
Target Start/End: Original strand, 36974284 - 36974330
Alignment:
Q  104 cacttaagaatggggtcttaagtgagaccctggatcttaagagactc 150  Q
    ||||||||||||||||||||||||||||   |||||||| |||||||    
T  36974284 cacttaagaatggggtcttaagtgagacatcggatcttaggagactc 36974330  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Original strand, 33494800 - 33494833
Alignment:
Q  46 caccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||    
T  33494800 caccaataactctttattatttacatttcaacaa 33494833  T

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Target: scaffold0092 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 4863 - 4922
Alignment:
Q  20 ctctaacaaaatgtctaaacaggtcccaccaataactctttatcatttacatttcaacaa 79  Q
    ||||||||||||||  |||  |||||||||||||||||||||||||||||| ||||||||    
T  4863 ctctaacaaaatgttaaaattggtcccaccaataactctttatcatttacaattcaacaa 4922  T

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Target: scaffold0040 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 55905 - 55948
Alignment:
Q  94 gtgtgaggtccacttaagaatg-gggtcttaagtgagaccctgg 136  Q
    ||||||| |||||||||||||| |||||||||||||||||||||    
T  55905 gtgtgagttccacttaagaatgagggtcttaagtgagaccctgg 55948  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 76
Target Start/End: Complemental strand, 315 - 283
Alignment:
Q  44 cccaccaataactctttatcatttacatttcaa 76  Q
    |||| ||||||||||||||||||||||||||||    
T  315 cccaacaataactctttatcatttacatttcaa 283  T

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