View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4984_low_4 (Length: 257)
Name: NF4984_low_4
Description: NF4984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4984_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 15 - 206
Target Start/End: Complemental strand, 33120847 - 33120656
Alignment:
| Q |
15 |
gaatcaacgtcaataaagccatcaaagtcgaagagccaagaaatctcaacgactccttaaacaaagctaaaaccgacataaggtacaaagagaaactcaa |
114 |
Q |
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| T |
33120847 |
gaatcaacgtcaataaggccatcaaagtcgaagagccaagaaatctcaacgactccttaaacaaagctaaaaccgacataaggtacaaagagaaactcaa |
33120748 |
T |
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| Q |
115 |
cattgtggaagtcaagaaatttgaataaggagaagaaccatatgttgagtcatcgaggagaaataacaaagcgaaacatggggaagaaaaac |
206 |
Q |
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| T |
33120747 |
cattgtggaagtcaagaaatttgaataaggagaagaatcatatgttgagtcatggaggagaaataacaaagtgaaacatggggaagaaaaac |
33120656 |
T |
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