View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4985_low_2 (Length: 341)
Name: NF4985_low_2
Description: NF4985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4985_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 13 - 322
Target Start/End: Original strand, 40368433 - 40368742
Alignment:
| Q |
13 |
aatattggtgtggtacaaataagccacttggatctcttaagtttgtgaagcatcatgtgatcaggttttttatctgaattatgtatatcaaaattcaccg |
112 |
Q |
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| T |
40368433 |
aatattggtgtggtacaaataagccacttggatctcttaagtttgtgaagcatcatgtgatcaggttttttatctgaattatgtatatcaaaattcaccg |
40368532 |
T |
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| Q |
113 |
gttttgaagagtcgatcatttaaaactttgaagaatttagtctcagcaattgtgcgcgaaaaatgagatacaatccaaaattttatggtctctttctaaa |
212 |
Q |
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| T |
40368533 |
gttttgaagagtcgatcatttaaaactttgaagaatttagtctcagcaattgtgcacgaaaaatgagatacaatccaaaattttatggtctctttctaaa |
40368632 |
T |
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| Q |
213 |
aatatcttcatatgttgataaatcatgtaaaaaaggacagtagtaaatagtttgacgattaatgattaagttaatatgaagctcatgtaacttgttgatt |
312 |
Q |
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| T |
40368633 |
aatatcttcatatgttgataaatcatgtaaaaaaggacagtagtaaatagtttgacgattaatgattaagttaatatgaagctcatgtaacttgttgatt |
40368732 |
T |
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| Q |
313 |
aagttgctct |
322 |
Q |
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| T |
40368733 |
aagttgctct |
40368742 |
T |
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