View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4986_low_3 (Length: 360)
Name: NF4986_low_3
Description: NF4986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4986_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 56 - 301
Target Start/End: Complemental strand, 43016318 - 43016073
Alignment:
| Q |
56 |
gctaatacatgatgctgtctttcatgcacttcctgatcacatgagcctcctgatgcttgcatttctcttgttgtagaaccttctcctattccaacctaca |
155 |
Q |
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| T |
43016318 |
gctaatacatgatgctgtctttcatgcacttcctgatcacatgagcctcctgatgcttgcatttctcttgttgtagaaccttctcctattccaacctaca |
43016219 |
T |
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| Q |
156 |
atatatataatggttgtatcaatcatcatcaaaactatatttatctatttataatgttacattttcttttcttagctaggtgggtaaaccaacgttggtt |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43016218 |
atatatataatggttgtatcaatcatcatcaaaactatatttatttatttataatgttacattttcttttcttagctaggtgggtaaaccaacgttggtt |
43016119 |
T |
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| Q |
256 |
agctagctactgacactgatttatcatccggtcaggtccatacaaa |
301 |
Q |
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| T |
43016118 |
agctagctactgacactgatttatcatccggtcaggtccatacaaa |
43016073 |
T |
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