View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4986_low_9 (Length: 287)

Name: NF4986_low_9
Description: NF4986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4986_low_9
NF4986_low_9
[»] chr5 (23 HSPs)
chr5 (11-269)||(42659443-42659695)
chr5 (84-135)||(7713526-7713577)
chr5 (84-131)||(24498582-24498629)
chr5 (85-130)||(22394034-22394079)
chr5 (66-135)||(26409247-26409316)
chr5 (78-130)||(27679497-27679549)
chr5 (84-131)||(5107261-5107308)
chr5 (84-131)||(5614763-5614810)
chr5 (84-127)||(9893687-9893730)
chr5 (84-131)||(36623190-36623237)
chr5 (89-131)||(19248477-19248519)
chr5 (84-134)||(29962353-29962403)
chr5 (84-134)||(30012395-30012445)
chr5 (89-131)||(39610362-39610404)
chr5 (69-130)||(15241398-15241459)
chr5 (90-131)||(28391653-28391694)
chr5 (90-131)||(30488923-30488964)
chr5 (90-131)||(40730217-40730258)
chr5 (90-131)||(41939284-41939325)
chr5 (84-124)||(15774013-15774053)
chr5 (84-128)||(19068455-19068499)
chr5 (78-130)||(25604010-25604062)
chr5 (78-130)||(36124401-36124453)
[»] chr7 (26 HSPs)
chr7 (68-131)||(24099235-24099298)
chr7 (84-131)||(48069853-48069900)
chr7 (66-131)||(22690034-22690099)
chr7 (78-135)||(34000256-34000313)
chr7 (84-137)||(34934296-34934349)
chr7 (84-129)||(43539120-43539165)
chr7 (86-126)||(35751389-35751429)
chr7 (67-130)||(3392469-3392532)
chr7 (84-135)||(5317304-5317355)
chr7 (84-131)||(5458087-5458134)
chr7 (84-135)||(7670428-7670479)
chr7 (84-135)||(25251504-25251555)
chr7 (84-135)||(30463965-30464016)
chr7 (89-131)||(8683068-8683110)
chr7 (69-131)||(8879748-8879810)
chr7 (85-131)||(21597678-21597724)
chr7 (89-131)||(35142170-35142212)
chr7 (84-130)||(37451253-37451299)
chr7 (86-131)||(1261173-1261218)
chr7 (64-129)||(21105603-21105668)
chr7 (64-129)||(30397069-30397134)
chr7 (95-136)||(30781445-30781486)
chr7 (66-130)||(9522911-9522975)
chr7 (84-128)||(15015242-15015286)
chr7 (84-128)||(24656971-24657015)
chr7 (79-135)||(36980988-36981044)
[»] chr4 (39 HSPs)
chr4 (84-131)||(18903774-18903821)
chr4 (89-135)||(43155073-43155119)
chr4 (84-129)||(6087747-6087792)
chr4 (64-145)||(35021463-35021544)
chr4 (89-129)||(16743305-16743345)
chr4 (84-128)||(39595953-39595997)
chr4 (86-129)||(470336-470379)
chr4 (84-131)||(2587716-2587763)
chr4 (66-129)||(3936627-3936690)
chr4 (84-131)||(6459940-6459987)
chr4 (84-135)||(12698591-12698642)
chr4 (84-131)||(14202495-14202542)
chr4 (64-131)||(24664987-24665054)
chr4 (84-131)||(27550750-27550797)
chr4 (84-131)||(32923246-32923293)
chr4 (86-129)||(34968342-34968385)
chr4 (84-135)||(53530003-53530054)
chr4 (84-131)||(54500567-54500614)
chr4 (84-131)||(54587898-54587945)
chr4 (85-131)||(8737727-8737773)
chr4 (84-130)||(17216145-17216191)
chr4 (90-136)||(24995774-24995820)
chr4 (89-131)||(29523553-29523595)
chr4 (86-127)||(921503-921544)
chr4 (90-131)||(14136089-14136130)
chr4 (84-129)||(19479493-19479538)
chr4 (81-130)||(34040430-34040479)
chr4 (79-136)||(43374283-43374340)
chr4 (84-129)||(47704582-47704627)
chr4 (84-129)||(52936641-52936686)
chr4 (71-128)||(53142607-53142664)
chr4 (84-128)||(20403184-20403228)
chr4 (84-132)||(21317354-21317402)
chr4 (75-131)||(21649276-21649332)
chr4 (84-136)||(35287523-35287575)
chr4 (64-128)||(36478992-36479056)
chr4 (79-131)||(36569171-36569223)
chr4 (78-130)||(51465336-51465388)
chr4 (65-101)||(53410764-53410800)
[»] chr3 (34 HSPs)
chr3 (84-135)||(49088746-49088797)
chr3 (78-130)||(47099045-47099097)
chr3 (84-131)||(48376833-48376880)
chr3 (84-130)||(2563928-2563974)
chr3 (85-131)||(18737106-18737152)
chr3 (90-135)||(20413774-20413819)
chr3 (86-131)||(32632319-32632364)
chr3 (64-137)||(39552456-39552529)
chr3 (85-129)||(3612199-3612243)
chr3 (89-137)||(5941315-5941363)
chr3 (95-131)||(43316628-43316664)
chr3 (88-127)||(7934957-7934996)
chr3 (84-131)||(21160050-21160097)
chr3 (84-131)||(33223866-33223913)
chr3 (84-131)||(43490433-43490480)
chr3 (68-118)||(7859492-7859542)
chr3 (89-131)||(7974533-7974575)
chr3 (89-135)||(8942011-8942057)
chr3 (67-129)||(27983858-27983920)
chr3 (84-118)||(31463495-31463529)
chr3 (90-131)||(4332689-4332730)
chr3 (78-127)||(17755123-17755172)
chr3 (78-127)||(19056443-19056492)
chr3 (78-131)||(21331427-21331480)
chr3 (84-137)||(31214626-31214679)
chr3 (84-129)||(36354535-36354580)
chr3 (78-135)||(38330762-38330819)
chr3 (78-131)||(47040904-47040957)
chr3 (84-128)||(6000684-6000728)
chr3 (95-131)||(10617551-10617587)
chr3 (84-132)||(29791773-29791821)
chr3 (88-136)||(40962715-40962763)
chr3 (84-128)||(50570205-50570249)
chr3 (95-131)||(54113338-54113374)
[»] chr8 (29 HSPs)
chr8 (86-136)||(40316849-40316899)
chr8 (84-130)||(41625193-41625239)
chr8 (84-129)||(574384-574429)
chr8 (84-132)||(24687776-24687824)
chr8 (84-135)||(6038291-6038342)
chr8 (78-136)||(3650513-3650571)
chr8 (84-130)||(10320495-10320541)
chr8 (85-131)||(44293573-44293619)
chr8 (78-131)||(28580942-28580995)
chr8 (66-131)||(37749997-37750062)
chr8 (79-131)||(20469322-20469374)
chr8 (78-130)||(39139008-39139060)
chr8 (84-131)||(1877678-1877725)
chr8 (78-137)||(3456831-3456890)
chr8 (84-135)||(9055421-9055472)
chr8 (84-135)||(26914087-26914138)
chr8 (84-131)||(27718910-27718957)
chr8 (86-129)||(28436565-28436608)
chr8 (84-131)||(31085880-31085927)
chr8 (84-131)||(33451365-33451412)
chr8 (86-136)||(13272540-13272590)
chr8 (89-131)||(13286129-13286171)
chr8 (78-131)||(18422463-18422516)
chr8 (89-130)||(42367728-42367769)
chr8 (95-131)||(15310320-15310356)
chr8 (95-131)||(15490689-15490725)
chr8 (86-126)||(18149260-18149300)
chr8 (84-136)||(28439952-28440004)
chr8 (95-131)||(34997456-34997492)
[»] chr6 (20 HSPs)
chr6 (86-135)||(26556382-26556431)
chr6 (64-135)||(24623313-24623384)
chr6 (79-129)||(23635725-23635775)
chr6 (78-131)||(33938689-33938742)
chr6 (71-135)||(6470619-6470683)
chr6 (84-132)||(20720797-20720845)
chr6 (85-136)||(9311947-9311998)
chr6 (84-131)||(9392684-9392731)
chr6 (84-131)||(12204367-12204414)
chr6 (79-130)||(12904328-12904379)
chr6 (84-131)||(13496114-13496161)
chr6 (78-129)||(14945523-14945574)
chr6 (84-131)||(30370166-30370213)
chr6 (84-130)||(4450261-4450307)
chr6 (65-131)||(9111045-9111111)
chr6 (89-130)||(12031-12072)
chr6 (90-131)||(14552335-14552376)
chr6 (65-130)||(28046175-28046240)
chr6 (69-130)||(31705901-31705962)
chr6 (95-131)||(6833476-6833512)
[»] chr2 (32 HSPs)
chr2 (84-129)||(41682403-41682448)
chr2 (68-128)||(17280948-17281008)
chr2 (84-131)||(346140-346187)
chr2 (84-131)||(3196558-3196605)
chr2 (89-131)||(10195683-10195725)
chr2 (84-129)||(13000685-13000730)
chr2 (79-131)||(19967416-19967468)
chr2 (68-135)||(2429010-2429077)
chr2 (84-127)||(6228636-6228679)
chr2 (84-131)||(33063984-33064031)
chr2 (85-131)||(8775268-8775314)
chr2 (84-130)||(12893260-12893306)
chr2 (85-131)||(17736791-17736837)
chr2 (89-131)||(22358046-22358088)
chr2 (89-131)||(22571886-22571928)
chr2 (84-130)||(28202296-28202342)
chr2 (84-137)||(1861825-1861878)
chr2 (64-129)||(4238759-4238824)
chr2 (71-124)||(17394679-17394732)
chr2 (78-135)||(24305315-24305372)
chr2 (84-129)||(40853834-40853879)
chr2 (90-131)||(40896531-40896572)
chr2 (78-131)||(44694686-44694739)
chr2 (89-129)||(3349686-3349726)
chr2 (64-128)||(5168575-5168639)
chr2 (67-131)||(9383208-9383272)
chr2 (90-130)||(9459079-9459119)
chr2 (85-129)||(15637598-15637642)
chr2 (79-135)||(23756706-23756762)
chr2 (84-124)||(34345371-34345411)
chr2 (81-129)||(37119271-37119319)
chr2 (84-124)||(41853370-41853410)
[»] scaffold0350 (1 HSPs)
scaffold0350 (84-135)||(1242-1293)
[»] chr1 (32 HSPs)
chr1 (64-131)||(2613720-2613787)
chr1 (84-131)||(3693812-3693859)
chr1 (64-135)||(10292930-10293001)
chr1 (64-135)||(13401591-13401662)
chr1 (90-127)||(50372383-50372420)
chr1 (66-131)||(52441509-52441574)
chr1 (95-131)||(7308448-7308484)
chr1 (84-136)||(16967210-16967262)
chr1 (79-131)||(48681944-48681996)
chr1 (84-131)||(3528485-3528532)
chr1 (84-131)||(13794524-13794571)
chr1 (64-135)||(17917134-17917205)
chr1 (84-135)||(31759909-31759960)
chr1 (84-131)||(32826721-32826768)
chr1 (84-131)||(36371056-36371103)
chr1 (84-131)||(39252273-39252320)
chr1 (90-128)||(14388-14426)
chr1 (79-129)||(3393579-3393629)
chr1 (95-129)||(21965919-21965953)
chr1 (85-135)||(29701337-29701387)
chr1 (84-130)||(32950777-32950823)
chr1 (84-130)||(34485876-34485922)
chr1 (85-131)||(41182623-41182669)
chr1 (65-130)||(18551636-18551701)
chr1 (69-126)||(21015965-21016022)
chr1 (84-137)||(26755608-26755661)
chr1 (78-135)||(37383801-37383858)
chr1 (90-130)||(12613179-12613219)
chr1 (66-130)||(18534003-18534067)
chr1 (89-137)||(27449466-27449514)
chr1 (68-128)||(44183974-44184034)
chr1 (84-132)||(45701325-45701373)
[»] scaffold0445 (1 HSPs)
scaffold0445 (84-130)||(4469-4515)
[»] scaffold0426 (1 HSPs)
scaffold0426 (84-130)||(5856-5902)
[»] scaffold0070 (1 HSPs)
scaffold0070 (78-135)||(42942-42999)
[»] scaffold0768 (1 HSPs)
scaffold0768 (95-131)||(6416-6452)
[»] scaffold0057 (1 HSPs)
scaffold0057 (84-128)||(35179-35223)


Alignment Details
Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 269
Target Start/End: Complemental strand, 42659695 - 42659443
Alignment:
Q  11 atcatcactttagatatgagagaagagtaagtcatgnnnnnnnnnnnnnnnnngtcggggttcaaagcccgacccttacatatattatgcattatttata 110  Q
    ||||||||||||||||||||||||||||||||||||                 || |||||||||||||||| |||||||||||||||||||||||||||    
T  42659695 atcatcactttagatatgagagaagagtaagtcatgttttttttattttttttgttggggttcaaagcccgaaccttacatatattatgcattatttata 42659596  T
Q  111 tcaactgagctaagctcacgaagacgagtaagtcatgctttaacataatgtctatggatgtaattagttcgtaagttaaattgatggtttataaatagtt 210  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42659595 tcaattgagctaaactcacgaagacgagtaagtcatgctttaacataatgtctatggatgtaattaattcgtaagttaaattgatggtttataaatagtt 42659496  T
Q  211 tttgtatattaaatactactattaacttgactttgtctcgtaaatataactcaaatgat 269  Q
    |||||||||||||      |||||| |||||| ||||||||||||||||||||||||||    
T  42659495 tttgtatattaaa------tattaatttgactctgtctcgtaaatataactcaaatgat 42659443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 7713577 - 7713526
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| |||||||||||||||||| |||||||||||| ||| |||||||||||    
T  7713577 ccttgcatatattatgcattattcatatcaactgagttaaactcacgaagac 7713526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 24498629 - 24498582
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||| |||||||||||| |||||||||||| |||||||||||    
T  24498629 ccttacatattttatgcattattcatatcaactgagttaagctcacga 24498582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 22394079 - 22394034
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||    
T  22394079 cttacatatattatgcattgtccatatcaactgagctaagctcacg 22394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 135
Target Start/End: Complemental strand, 26409316 - 26409247
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||| || ||||  |||||||||||||||||||| |  ||| ||||||||||||||||||| ||||    
T  26409316 cggggttcgaaccccggaccttacatatattatgcattgtccataccaactgagctaagctcacggagac 26409247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 27679549 - 27679497
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| |||| ||||||||||||||||| | || |||||||||||||||||||    
T  27679549 cccgaaccttgcatatattatgcattatctttaccaactgagctaagctcacg 27679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 5107261 - 5107308
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||||||||||||||||| ||| |||||||| |||||||||||    
T  5107261 ccttgcatatattatgcattattcataccaactgagttaagctcacga 5107308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 5614810 - 5614763
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||    
T  5614810 ccttacatatattatgcattatccatatcaactgagttaagttcacga 5614763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 9893687 - 9893730
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctc 127  Q
    |||| ||||| ||||||||||| |||||||||||||||||||||    
T  9893687 ccttgcatattttatgcattatctatatcaactgagctaagctc 9893730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 36623190 - 36623237
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  36623190 ccttgcatatattatgcattattcttatcaactgagttaagctcacga 36623237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 19248519 - 19248477
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| | |||| ||||||||||||||||||||    
T  19248519 catatattatgcattgtctataccaactgagctaagctcacga 19248477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 29962403 - 29962353
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaaga 134  Q
    |||| |||||||||| |||| ||| |||||||||||||||||||| |||||    
T  29962403 ccttgcatatattatacattgtttctatcaactgagctaagctcaagaaga 29962353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Original strand, 30012395 - 30012445
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaaga 134  Q
    |||| |||||||||| |||| ||| |||||||||||||||||||| |||||    
T  30012395 ccttgcatatattatacattgtttctatcaactgagctaagctcaagaaga 30012445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 39610362 - 39610404
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| |  ||||||||||||||||||||||||    
T  39610362 catatattatgcattgtccatatcaactgagctaagctcacga 39610404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 15241459 - 15241398
Alignment:
Q  69 ggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| || |||||||| | |||||| |||||| ||||  ||||||||||||||||||||||    
T  15241459 ggttcgaaccccgacccctgcatataatatgcaatattcctatcaactgagctaagctcacg 15241398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 28391653 - 28391694
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| |||||||| ||||||||||||||| |||||||    
T  28391653 atatattatacattatttctatcaactgagctaaactcacga 28391694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 30488964 - 30488923
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||| || ||||||||||| ||||||||||||    
T  30488964 atatattatgcattgttcatatcaactgaactaagctcacga 30488923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 40730217 - 40730258
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||| || ||||||||| ||||||||||||||    
T  40730217 atatattatgcattgttcatatcaacttagctaagctcacga 40730258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 41939284 - 41939325
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||    
T  41939284 atatattatgcattattcataccaattgagctaagctcacga 41939325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 15774013 - 15774053
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaag 124  Q
    |||||||||||||||||||||| |||| ||||||| |||||    
T  15774013 ccttacatatattatgcattatctataccaactgaactaag 15774053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 19068455 - 19068499
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||| |||||||||||||||||  ||| |||||||||||||||||    
T  19068455 ccttgcatatattatgcattatccataccaactgagctaagctca 19068499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 25604010 - 25604062
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| |||| ||||||||||||| | |  |||||||||||||||||||||||    
T  25604010 cccgaaccttgcatatattatgcactgtccatatcaactgagctaagctcacg 25604062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 36124453 - 36124401
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||| | |||||| |||||| ||||  ||||||||||||||||||||||    
T  36124453 cccgacccctgcatataatatgcaatattcctatcaactgagctaagctcacg 36124401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 24099235 - 24099298
Alignment:
Q  68 gggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| ||||| |||||||||||||||||||| |||||||||| |||||| || ||||||    
T  24099235 gggttcaaaccccgaaccttacatatattatgcattgtttatatcaattgagcttagttcacga 24099298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 48069853 - 48069900
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| || || |||||||||||||||||||||    
T  48069853 ccttacatatattatgcattgttcatgtcaactgagctaagctcacga 48069900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 22690034 - 22690099
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||| || ||| | |||| ||||||||||||||||||  || ||||||||||||||||||||    
T  22690034 cggggttcgaaccccaaaccttgcatatattatgcattattcttagcaactgagctaagctcacga 22690099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 34000313 - 34000256
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| ||||||||||||||||||||||   ||||||||||| |||||||||| ||||    
T  34000313 cccgaaccttacatatattatgcattatccttatcaactgagttaagctcacggagac 34000256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 34934296 - 34934349
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    |||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||    
T  34934296 ccttgcatatattatgcattgtttataccaattgagttaagctcacgaagacga 34934349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 43539120 - 43539165
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||||| ||  |||||||||||||||||||||    
T  43539120 ccttacatatattatgcattgttcctatcaactgagctaagctcac 43539165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 35751389 - 35751429
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagct 126  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  35751389 ttacatatattatgcattattcatatcaattgagctaagct 35751429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 130
Target Start/End: Complemental strand, 3392532 - 3392469
Alignment:
Q  67 ggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||| || |||||||| |||||||| |||||| |||  |||||||||||| ||||||||||    
T  3392532 ggggttcgaaccccgacccctacatataatatgcaatatccatatcaactgagttaagctcacg 3392469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 5317304 - 5317355
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| ||||||||||||||| |  |||||||||||| |||||||||||||||    
T  5317304 ccttgcatatattatgcattttccatatcaactgagttaagctcacgaagac 5317355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 5458087 - 5458134
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| ||  |||||||||||||||||||||||    
T  5458087 ccttgcatatattatgcattgttcttatcaactgagctaagctcacga 5458134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 7670479 - 7670428
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| ||||||||||||||| || | | ||||||||||||||||||||||||    
T  7670479 ccttgcatatattatgcattgttcaaaccaactgagctaagctcacgaagac 7670428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 25251555 - 25251504
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||||| ||||    
T  25251555 ccttatatatattatgcattgtttataccaactgagttaagctcacggagac 25251504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 30463965 - 30464016
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| ||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  30463965 ccttgcatatattatgcattatctatactaactgagctaaactcacgaagac 30464016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 8683110 - 8683068
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| | |||| ||||||||||||||||||||    
T  8683110 catatattatgcattgtctataccaactgagctaagctcacga 8683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 131
Target Start/End: Original strand, 8879748 - 8879810
Alignment:
Q  69 ggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| || ||||| |||| ||||||||||||||| | |||| |||||||| |||||||||||    
T  8879748 ggttcgaatcccgaaccttgcatatattatgcattgtctataccaactgagttaagctcacga 8879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 21597724 - 21597678
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||| |  |||||||||||| |||||||||||    
T  21597724 cttacatatattatgcattgtccatatcaactgagataagctcacga 21597678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 35142170 - 35142212
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| |  ||||||||||||||||||||||||    
T  35142170 catatattatgcattgtccatatcaactgagctaagctcacga 35142212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 37451253 - 37451299
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||||||||   ||||||||||||||| ||||||    
T  37451253 ccttacatatattatgcattatccttatcaactgagctaaactcacg 37451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 1261218 - 1261173
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| || |||||||||||||| |||| |||||||    
T  1261218 ttacatatattatgctttgtttatatcaactgaactaaactcacga 1261173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 21105668 - 21105603
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||| || | ||| |||| ||||||||||||||| |  ||| ||||||||||||||||||    
T  21105668 gtcggggttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagctcac 21105603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 30397134 - 30397069
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||||||||| ||||| |||||||||| ||||||||| |  ||| ||| ||| ||||||||||    
T  30397134 gtcggggttcaaaccccgaaccttacatattttatgcattgtccataccaaatgacctaagctcac 30397069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 136
Target Start/End: Complemental strand, 30781486 - 30781445
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    ||||||||| | ||||||||||||||||||||||||| ||||    
T  30781486 ttatgcattgtctatatcaactgagctaagctcacgaggacg 30781445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 9522975 - 9522911
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||| || ||| | |||| ||||||||||||||| || ||| ||||||||||||| |||||    
T  9522975 cggggttcgaaccccaaaccttgcatatattatgcattgttcataccaactgagctaagttcacg 9522911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 15015286 - 15015242
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||||||||||||| ||  ||||||||||| ||||||||    
T  15015286 ccttacatatattatgcattgttcttatcaactgagttaagctca 15015242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 24657015 - 24656971
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||| |||||||||||  ||| |||||||||||||||||    
T  24657015 ccttacatattttatgcattatccataccaactgagctaagctca 24656971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 36981044 - 36980988
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| ||||||||||||||| |||| | ||||  |||| ||||||||||||||||||    
T  36981044 ccgaaccttacatatattatacattgtctatactaactaagctaagctcacgaagac 36980988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 18903774 - 18903821
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  18903774 ccttacatatattatgcattatttttatcaactgagctaaactcacga 18903821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 43155119 - 43155073
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||||||||||  ||| ||||||||||||||||||||||||    
T  43155119 catatattatgcattatccataacaactgagctaagctcacgaagac 43155073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 6087792 - 6087747
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  6087792 ccttgcatatattatgcattatctataccaactgagctaagctcac 6087747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 35021463 - 35021544
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagacgagtaagtca 145  Q
    |||||||||| || ||||| |||| ||||| ||||| ||| |  |||||||||||||||||||||||| ||| | |||||||    
T  35021463 gtcggggttcgaaccccgaaccttgcatattttatgtattgtccatatcaactgagctaagctcacgaggacaactaagtca 35021544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 16743305 - 16743345
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  16743305 catatattatgcattatccatatcaactgagctaagctcac 16743345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 39595953 - 39595997
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||    
T  39595953 ccttgcatatattatgtattatttatatcaattgagctaagctca 39595997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 470336 - 470379
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||||||||| |||||| | |||||||||||||||||||||    
T  470336 ttacatatattatacattatctttatcaactgagctaagctcac 470379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 2587716 - 2587763
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||  ||| ||| ||||||||||||||||    
T  2587716 ccttacatatattatgcattatccataccaattgagctaagctcacga 2587763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 129
Target Start/End: Complemental strand, 3936690 - 3936627
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||| || ||||  |||| ||||||||||||||| || ||| ||||||||||||||||||    
T  3936690 cggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgagctaagctcac 3936627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 6459940 - 6459987
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| |  |||||||||||| |||||||||||    
T  6459940 ccttacatatattatgcattgtccatatcaactgagttaagctcacga 6459987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 12698642 - 12698591
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| ||||||||||||||| |  | ||||||||||||||||||||||||||    
T  12698642 ccttgcatatattatgcattgtccaaatcaactgagctaagctcacgaagac 12698591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 14202495 - 14202542
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||  | |||||||||| |||||||||||    
T  14202495 ccttacatatattatgcattatccaaatcaactgagttaagctcacga 14202542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 131
Target Start/End: Original strand, 24664987 - 24665054
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||| || ||||  |||| ||||||||||||||| |  ||| ||||||||||||||||||||    
T  24664987 gtcggggttcgaaccccggaccttgcatatattatgcattctccataccaactgagctaagctcacga 24665054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 27550750 - 27550797
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||||||| | ||||||||| |||||||||||    
T  27550750 ccttgcatatattatgcattatttctttcaactgagttaagctcacga 27550797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 32923246 - 32923293
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| || ||| |||||||| |||||||||||    
T  32923246 ccttacatatattatgcattgttcataccaactgagttaagctcacga 32923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 34968385 - 34968342
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  34968385 ttacatatattatgcattatttttaccaactgagttaagctcac 34968342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 53530054 - 53530003
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||||||||||||| ||| ||| ||||||| |||||||||| ||||    
T  53530054 ccttacatatattatgcattgtttttattaactgagttaagctcacgcagac 53530003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 54500614 - 54500567
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| | | || ||||||||||||||||||||    
T  54500614 ccttacatatattatgcattgtctctaccaactgagctaagctcacga 54500567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 54587945 - 54587898
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||  |||||||||||| || ||||||||    
T  54587945 ccttacatatattatgcattatccatatcaactgagttatgctcacga 54587898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 8737773 - 8737727
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| ||| |||||||||| ||||| ||||||||||    
T  8737773 cttacatatattatgtattgtttatatcaattgagcgaagctcacga 8737727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 17216145 - 17216191
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||| ||||||||||||||||||  ||||||||||||| ||||||||    
T  17216145 ccttgcatatattatgcattattcttatcaactgagcttagctcacg 17216191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 136
Target Start/End: Complemental strand, 24995820 - 24995774
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    ||||||||||||||||| ||| ||||||||||||||| ||| |||||    
T  24995820 atatattatgcattattcataccaactgagctaagcttacgtagacg 24995774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 29523553 - 29523595
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||||| ||| | ||||||||||||||    
T  29523553 catatattatgcattatttataccaattaagctaagctcacga 29523595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 921503 - 921544
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctc 127  Q
    ||||||||| |||||||||| | |||||||||||||||||||    
T  921503 ttacatataatatgcattatctctatcaactgagctaagctc 921544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 14136130 - 14136089
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||| | | |||||||||||||||||||||||    
T  14136130 atatattatgcattgtctttatcaactgagctaagctcacga 14136089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 19479493 - 19479538
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| ||||||||||||||| || |||| |||||||||||||||||    
T  19479493 ccttgcatatattatgcattgttcatattaactgagctaagctcac 19479538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 34040479 - 34040430
Alignment:
Q  81 gacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| ||||||||  ||||| ||||| ||||||||||||||||||||||    
T  34040479 gacccctacatataaaatgcaatatttctatcaactgagctaagctcacg 34040430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 43374283 - 43374340
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||| |||| ||||| ||||||||| |  |||||||||||||||||||||||| ||||    
T  43374283 ccgaaccttgcatattttatgcattgtccatatcaactgagctaagctcacgaggacg 43374340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 47704627 - 47704582
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||||||||||| ||||||| ||| |||||||| |||||||||    
T  47704627 ccttacatatattatacattattcataccaactgagttaagctcac 47704582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 52936686 - 52936641
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||||||||||| |||| ||| ||||||||||| |||||||||    
T  52936686 ccttacatatattatacattgtttctatcaactgagttaagctcac 52936641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 53142664 - 53142607
Alignment:
Q  71 ttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||| ||||| | || ||||||||||||||||| |||| ||||||| |||||||||    
T  53142664 ttcaaaccccgaacgttgcatatattatgcattatctatagcaactgaactaagctca 53142607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 20403184 - 20403228
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||| ||||||||||||||| ||  ||||||||||||||||||||    
T  20403184 ccttgcatatattatgcattgttcctatcaactgagctaagctca 20403228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 21317354 - 21317402
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaa 132  Q
    |||| ||||||||||||||| | | || |||||||||||||||||||||    
T  21317354 ccttgcatatattatgcattgtctctaccaactgagctaagctcacgaa 21317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 131
Target Start/End: Complemental strand, 21649332 - 21649276
Alignment:
Q  75 aagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||| |||||||||||||||||||| |  ||  | ||||||||||||||||||    
T  21649332 aagcccgatccttacatatattatgcattgtccatcccgactgagctaagctcacga 21649276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 35287523 - 35287575
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||| ||||| ||||||||| || ||| |||||||||||||||||||| ||||    
T  35287523 ccttgcatattttatgcattgttcataccaactgagctaagctcacgaggacg 35287575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 36479056 - 36478992
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||| || | ||| |||||||||||||||||||| |  ||| |||| ||||||||||||    
T  36479056 gtcggggttcgaacctcgaaccttacatatattatgcattgtccataccaacagagctaagctca 36478992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 36569223 - 36569171
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||||||||||||||||||| || |||  || ||||||||||||||||    
T  36569223 ccgaaccttacatatattatgcatttttcatactaattgagctaagctcacga 36569171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 51465388 - 51465336
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||||||||||||||||| |  ||| |||||||  ||||||||||    
T  51465388 cccgacccttacatatattatgcattgtccataccaactgaattaagctcacg 51465336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 101
Target Start/End: Original strand, 53410764 - 53410800
Alignment:
Q  65 tcggggttcaaagcccgacccttacatatattatgca 101  Q
    ||||| |||||| ||||||||||||||||||||||||    
T  53410764 tcgggattcaaaccccgacccttacatatattatgca 53410800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 49088797 - 49088746
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  49088797 ccttacatattttatgcattgtttatatcaactgagctaaactcacgaagac 49088746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 47099045 - 47099097
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| |||| ||||||||||||||||||  ||||||||||||||||||||||    
T  47099045 cccgaaccttgcatatattatgcattattcttatcaactgagctaagctcacg 47099097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 48376880 - 48376833
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||||| | || ||||||||||||||||||||    
T  48376880 ccttacatatattatgcattatctttaccaactgagctaagctcacga 48376833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 2563974 - 2563928
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||||||    
T  2563974 ccttacatatattattcattatttttatcaactgagttaagctcacg 2563928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 18737152 - 18737106
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  18737152 cttacatatattatgcattctttatatcaactaagttaagctcacga 18737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 135
Target Start/End: Original strand, 20413774 - 20413819
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||| |||||  ||||||||||||||||||||||||||||    
T  20413774 atatattatgtattatccatatcaactgagctaagctcacgaagac 20413819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 131
Target Start/End: Complemental strand, 32632364 - 32632319
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||    
T  32632364 ttacatatattatgcattgtttataccaactgagcaaagctcacga 32632319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 39552529 - 39552456
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    ||||||||||||| ||||| |||| ||||| ||||||||| |||||| ||||| || |||||||| || |||||    
T  39552529 gtcggggttcaaatcccgaaccttgcatattttatgcattgtttataccaactaagttaagctcatgaggacga 39552456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 3612199 - 3612243
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||    
T  3612199 cttatatatattatgcattatccatatcaactgagctaagctcac 3612243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 5941315 - 5941363
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    ||||||||||||||| || ||| |||||||| |||||||||||||||||    
T  5941315 catatattatgcattgttcataccaactgagttaagctcacgaagacga 5941363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 43316628 - 43316664
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||| |||||||||||||||||||||||||    
T  43316628 ttatgcattatctatatcaactgagctaagctcacga 43316664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 7934957 - 7934996
Alignment:
Q  88 acatatattatgcattatttatatcaactgagctaagctc 127  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  7934957 acatatattatgcattatttatatcaactaagttaagctc 7934996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 21160097 - 21160050
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||    
T  21160097 ccttacatatattatgcattatccatatcaactgagttaagttcacga 21160050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 33223913 - 33223866
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| ||| || ||||||||||||||||||||    
T  33223913 ccttgcatatattatgcattgtttctaccaactgagctaagctcacga 33223866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 43490433 - 43490480
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  43490433 ccttgcatatattatgcattgttcataccaactgagctaagctcacga 43490480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 7859492 - 7859542
Alignment:
Q  68 gggttcaaagcccgacccttacatatattatgcattatttatatcaactga 118  Q
    |||||| || ||||| |||||||||||||||||||||| |||| |||||||    
T  7859492 gggttcgaaccccgaaccttacatatattatgcattatctataccaactga 7859542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 7974533 - 7974575
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||  ||| ||||||||||||||||||||    
T  7974533 catatattatgcattatccataccaactgagctaagctcacga 7974575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 8942057 - 8942011
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||||||||||||| || ||| |||||||| |||||||||||||||    
T  8942057 catatattatgcattgttcataccaactgagttaagctcacgaagac 8942011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 129
Target Start/End: Complemental strand, 27983920 - 27983858
Alignment:
Q  67 ggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||| |||||||| | ||||||  ||||| ||||| || ||||||||||||||||||    
T  27983920 ggggttcaaaccccgacccctgcatataaaatgcaatatttctaccaactgagctaagctcac 27983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 118
Target Start/End: Complemental strand, 31463529 - 31463495
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactga 118  Q
    |||||||||||||||||||||||| ||||||||||    
T  31463529 ccttacatatattatgcattatttctatcaactga 31463495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 4332689 - 4332730
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||| | | ||||||||||||||||||||    
T  4332689 atatattatgcattattcaaaccaactgagctaagctcacga 4332730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 17755172 - 17755123
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctc 127  Q
    ||||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  17755172 cccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 17755123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 19056492 - 19056443
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctc 127  Q
    ||||| |||||||||||||||| ||| ||  |||||||||||||||||||    
T  19056492 cccgaaccttacatatattatgtattgttcctatcaactgagctaagctc 19056443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 21331427 - 21331480
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| |||| ||||||||||||||| |  ||| ||||||||||||||||||||    
T  21331427 cccgaaccttgcatatattatgcattgtccataacaactgagctaagctcacga 21331480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 31214679 - 31214626
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    |||||||||||||||||||||||| || ||||| | ||||| |||| |||||||    
T  31214679 ccttacatatattatgcattatttctaccaacttaactaagttcacaaagacga 31214626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 36354535 - 36354580
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||  ||| || ||||||||||||||||||||||    
T  36354535 ccttacatatattatatatttttcatatcaactgagctaagctcac 36354580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 38330762 - 38330819
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| |||| ||||||||||  ||| |||||| ||| ||||||||||||||||||||    
T  38330762 cccgaaccttgcatatattatatattgtttataccaattgagctaagctcacgaagac 38330819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 47040904 - 47040957
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| ||||||||| |||||||||| || ||||||||||| ||||||| ||||    
T  47040904 cccgaaccttacatacattatgcattgttcatatcaactgaactaagcttacga 47040957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 6000684 - 6000728
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    ||||| |||||||||||||| | |||||||| |||||||||||||    
T  6000684 ccttatatatattatgcattgtctatatcaattgagctaagctca 6000728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 10617587 - 10617551
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||  ||||||||||||||||||||||||    
T  10617587 ttatgcattatccatatcaactgagctaagctcacga 10617551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 29791821 - 29791773
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaa 132  Q
    |||||||||||||||| ||| ||| ||||||||||| ||| ||||||||    
T  29791821 ccttacatatattatgtattgtttctatcaactgagttaaactcacgaa 29791773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 40962763 - 40962715
Alignment:
Q  88 acatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||||| ||||  ||| |||||| |||||||||||||||||||||||||    
T  40962763 acatattttatatattgtttatagcaactgagctaagctcacgaagacg 40962715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 50570205 - 50570249
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||| ||||||||||||||| | |||| |||||||||||||||||    
T  50570205 ccttgcatatattatgcattgtctataccaactgagctaagctca 50570249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 54113374 - 54113338
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  54113374 ttatgcattgtctatatcaactgagctaagctcacga 54113338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 40316899 - 40316849
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||| ||||    
T  40316899 ttacatatattatgcattattcatatcaactgagataagctcacgaggacg 40316849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 41625239 - 41625193
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41625239 ccttacatatattatgcattattcataccaactgagctaagctcacg 41625193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 574429 - 574384
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||||| | |||||||||||||||||||||||    
T  574429 ccttacatatattatgcattgtctatatcaactgagctaagctcac 574384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 24687824 - 24687776
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaa 132  Q
    |||||||||||||||||||| |||||||||| ||||||||||| |||||    
T  24687824 ccttacatatattatgcattgtttatatcaattgagctaagcttacgaa 24687776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 6038291 - 6038342
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||||||||||||| |  ||||||||||||||||| ||||||||||    
T  6038291 ccttacatatattatgcattgtccatatcaactgagctaagttcacgaagac 6038342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 3650571 - 3650513
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    ||||| |||||||||||||||||||| ||| || |||||||| ||||||||||| ||||    
T  3650571 cccgaaccttacatatattatgcattttttctaccaactgagttaagctcacgatgacg 3650513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 10320541 - 10320495
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||    
T  10320541 ccttacatatattatgcattattcttatcaactgagctaaactcacg 10320495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 44293619 - 44293573
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||    
T  44293619 cttacatatattatgcattgtctataccaactgagctaagctcacga 44293573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 28580995 - 28580942
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| |||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  28580995 cccgaaccttacatattttatgcattattcataccaactgagccaagctcacga 28580942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 37749997 - 37750062
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||| ||||  | || ||||||||||||||| || |||||||||||||||| |||||||    
T  37749997 cggggttcaaaccccggactttgcatatattatgcattgttcatatcaactgagctaaactcacga 37750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 20469322 - 20469374
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||| ||||||||||||||| |||||| ||||||| ||||||||||||    
T  20469322 ccgaaccttgcatatattatgcattgtttataccaactgatctaagctcacga 20469374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 130
Target Start/End: Original strand, 39139008 - 39139060
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| |||||||||| |||||||||||| | | |||||||||||||||||||    
T  39139008 cccgaaccttacatattttatgcattattaaaaccaactgagctaagctcacg 39139060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 1877678 - 1877725
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| | ||||||||||||| |||||||||||    
T  1877678 ccttgcatatattatgcattgtctatatcaactgagttaagctcacga 1877725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 137
Target Start/End: Original strand, 3456831 - 3456890
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    ||||| |||||||||||||||||||| || ||||||| |||| |||| |||||| |||||    
T  3456831 cccgaaccttacatatattatgcattgttcatatcaattgagttaagttcacgatgacga 3456890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 9055421 - 9055472
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| |||||||||| |||||||| |||||||||||||||| ||| ||||||    
T  9055421 ccttgcatatattatacattatttttatcaactgagctaagttcatgaagac 9055472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 26914087 - 26914138
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||| |||| |||||| |||| ||||||| ||||||||||||||||    
T  26914087 ccttacatattttatacattatctatagcaactgaactaagctcacgaagac 26914138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 27718910 - 27718957
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||    
T  27718910 ccttgcatatattatgcattgtccatatcaactgagctaagctcacga 27718957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 28436565 - 28436608
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||| || ||||||| ||||||||||||||    
T  28436565 ttacatatattatgcattgttgatatcaattgagctaagctcac 28436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 31085880 - 31085927
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| ||||| |||| || ||||||||||||||||||||||||    
T  31085880 ccttacatacattatacattgttcatatcaactgagctaagctcacga 31085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 33451365 - 33451412
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||||||||||||||||  ||| ||||||||||||||||||||    
T  33451365 ccttgcatatattatgcattatccataccaactgagctaagctcacga 33451412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 13272540 - 13272590
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||||||||||||||||| |  |||||||||||| |||| |||||||||||    
T  13272540 ttacatatattatgcattgtccatatcaactgagttaagttcacgaagacg 13272590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Complemental strand, 13286171 - 13286129
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| | |||| ||||||||||||||||||||    
T  13286171 catatattatgcattgtctataccaactgagctaagctcacga 13286129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 18422463 - 18422516
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| |||||||||||||||||||| ||| ||||||||||  |||||| ||||    
T  18422463 cccgaaccttacatatattatgcattgtttctatcaactgaattaagcttacga 18422516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Complemental strand, 42367769 - 42367728
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||| ||  ||||||||||||||||||||||    
T  42367769 catatattatgcattgttcttatcaactgagctaagctcacg 42367728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 15310356 - 15310320
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  15310356 ttatgcattgtctatatcaactgagctaagctcacga 15310320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 15490725 - 15490689
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  15490725 ttatgcattgtctatatcaactgagctaagctcacga 15490689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 18149300 - 18149260
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagct 126  Q
    ||||||||||||||||||||| ||  |||||||||||||||    
T  18149300 ttacatatattatgcattattcattccaactgagctaagct 18149260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Complemental strand, 28440004 - 28439952
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||||||||||||||||||||| | ||||||||||  ||| ||||||| ||||    
T  28440004 ccttacatatattatgcattatctttatcaactgaattaaactcacgatgacg 28439952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 34997492 - 34997456
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  34997492 ttatgcattgtctatatcaactgagctaagctcacga 34997456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 135
Target Start/End: Original strand, 26556382 - 26556431
Alignment:
Q  86 ttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  26556382 ttacatgtattatgcattatctatatcaactgaactaagctcacgaagac 26556431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 24623313 - 24623384
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||  || ||||| |||||||||||||||||||| |  |||||||||||||||| ||||| |||||    
T  24623313 gtcggggtttgaaccccgaaccttacatatattatgcattgtccatatcaactgagctaaactcacaaagac 24623384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 23635725 - 23635775
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| |||||||||||||||||||| | ||||||||||||| |||||||||    
T  23635725 ccgaaccttacatatattatgcattgtatatatcaactgagataagctcac 23635775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 33938689 - 33938742
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| |||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  33938689 cccgaaccttgcatatattatgcattgttcataccaactgagctaagctcacga 33938742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 6470619 - 6470683
Alignment:
Q  71 ttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||| |||||  ||||||||||||||||||| | | ||||||||||| |||||||||| ||||    
T  6470619 ttcaaaccccgaaacttacatatattatgcattgtctttatcaactgagttaagctcacggagac 6470683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 20720797 - 20720845
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaa 132  Q
    |||||||||||||||||||| |  ||| |||||||||||||||||||||    
T  20720797 ccttacatatattatgcattgtccataacaactgagctaagctcacgaa 20720845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 9311947 - 9311998
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    ||||||||||||||| |||||| ||| |||||||| ||||||||||| ||||    
T  9311947 cttacatatattatgtattattcataccaactgagttaagctcacgaggacg 9311998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 9392684 - 9392731
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  9392684 ccttgcatatattatgcatttttcataacaactgagctaagctcacga 9392731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 12204414 - 12204367
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| |  ||||||||||||||| ||||||||    
T  12204414 ccttacatatattatgcattgtccatatcaactgagctatgctcacga 12204367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 12904328 - 12904379
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||| |||| ||||||||||||||| || |||||||||||| ||||||||||    
T  12904328 ccgaaccttgcatatattatgcattgttcatatcaactgaggtaagctcacg 12904379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13496161 - 13496114
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| || |||||||||||| |||||||||||    
T  13496161 ccttgcatatattatgcattgttcatatcaactgagttaagctcacga 13496114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 14945523 - 14945574
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||| |||||||||||||||||| | | | |||||||||||||||||||||    
T  14945523 cccgaaccttacatatattatgcactgtctctatcaactgagctaagctcac 14945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 30370166 - 30370213
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||||| | || ||||||| ||||||||||||    
T  30370166 ccttacatatattatgcattatctttaccaactgaactaagctcacga 30370213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 4450307 - 4450261
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||| ||||||||||||||| | | ||||||||||||||||||||||    
T  4450307 ccttgcatatattatgcattgtctttatcaactgagctaagctcacg 4450261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Complemental strand, 9111111 - 9111045
Alignment:
Q  65 tcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| || ||||  |||| ||||||||||||||| || ||| ||||||| ||||||||||||    
T  9111111 tcggggttcgaaccccggaccttgcatatattatgcattgttcataccaactgaactaagctcacga 9111045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 12031 - 12072
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||| | ||||||||||||||| ||||||    
T  12031 catatattatgcattatctctatcaactgagctaaactcacg 12072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Complemental strand, 14552376 - 14552335
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||| | ||||||||||| |||||||||||    
T  14552376 atatattatgcattatctctatcaactgagttaagctcacga 14552335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 28046175 - 28046240
Alignment:
Q  65 tcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||| | | | |||| ||||||||||||||| | | |||||||||| |||||||||||    
T  28046175 tcggggttcaaacctcaaaccttgcatatattatgcattgtctttatcaactgaactaagctcacg 28046240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 31705962 - 31705901
Alignment:
Q  69 ggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||| || |||||||| ||||||||| ||||| |||  ||| |||||||||||||||||||    
T  31705962 ggttcgaaccccgacccctacatatataatgcaatatccataccaactgagctaagctcacg 31705901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 6833512 - 6833476
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  6833512 ttatgcattgtctatatcaactgagctaagctcacga 6833476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 41682403 - 41682448
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||    
T  41682403 ccttacatatattatgcattatttataccaactgagttaagctcac 41682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 17280948 - 17281008
Alignment:
Q  68 gggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    ||||||||| ||||  |||| |||||||||| ||||||| |||||||||||||||||||||    
T  17280948 gggttcaaaccccgcaccttgcatatattatacattattcatatcaactgagctaagctca 17281008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 346140 - 346187
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||    
T  346140 ccttacatatattatgcattattcaaaccaactgagctaagctcacga 346187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 3196605 - 3196558
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| || ||||||||||||| ||||||||||    
T  3196605 ccttacatatattatgcattgttcatatcaactgagcaaagctcacga 3196558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 10195683 - 10195725
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  10195683 catatattatgcattatccatatcaactgagctaagctcacga 10195725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 13000730 - 13000685
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||||||||||| | || ||||||||||||||||||    
T  13000730 ccttacatatattatgcattatctttaccaactgagctaagctcac 13000685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 19967468 - 19967416
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||| || |||||||||||| || ||||||||||||||||||||||||    
T  19967468 ccgaaccttgcacatattatgcattgttcatatcaactgagctaagctcacga 19967416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 2429077 - 2429010
Alignment:
Q  68 gggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||| |||| |||||||||||||||||||| |   || ||||||| ||||||||||| ||||    
T  2429077 gggttcaaagaccgaaccttacatatattatgcattgtccttaccaactgaactaagctcacggagac 2429010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 6228679 - 6228636
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctc 127  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||    
T  6228679 ccttgcatatattatgcattgtttatatcaattgagctaagctc 6228636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 33064031 - 33063984
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||||||    
T  33064031 ccttgcatatattatgcattgtccatatcaactgagctaagctcacga 33063984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 8775314 - 8775268
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| ||||||  |||||||||| ||||||||||||    
T  8775314 cttacatatattatgtattattcctatcaactgacctaagctcacga 8775268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 12893260 - 12893306
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||| |||| ||  ||||||||||||||||||||||    
T  12893260 ccttacatatattatacattgttcttatcaactgagctaagctcacg 12893306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 17736837 - 17736791
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  17736837 cttacatattttatgcattgttcataccaactgagctaagctcacga 17736791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 22358046 - 22358088
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||| |||||||||||| ||||||||||| |||||||||||    
T  22358046 catatactatgcattatttttatcaactgagttaagctcacga 22358088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 22571886 - 22571928
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| | |||||||||||||||||| ||||||    
T  22571886 catatattatgcattgtctatatcaactgagctaagttcacga 22571928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 28202342 - 28202296
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||||||||||| |   ||||||||||||||||||||||    
T  28202342 ccttacatatattatgcattgtccctatcaactgagctaagctcacg 28202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 1861825 - 1861878
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    |||| ||||||||||||||| |  |||||| ||||||||||||||||| |||||    
T  1861825 ccttgcatatattatgcattgtccatatcagctgagctaagctcacgaggacga 1861878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 4238824 - 4238759
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||| |||| || ||||| |||||||||||||||||||| |  |||  |||||||||||||||||    
T  4238824 gtcggagttcgaaccccgaaccttacatatattatgcattgtccatactaactgagctaagctcac 4238759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 124
Target Start/End: Complemental strand, 17394732 - 17394679
Alignment:
Q  71 ttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaag 124  Q
    |||||| ||||| |||||||||||||||| ||||||  |||||||||| |||||    
T  17394732 ttcaaaccccgaaccttacatatattatgtattattcctatcaactgaactaag 17394679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 24305315 - 24305372
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| |||| ||||| ||||||||| |  |||| |||||||||||||||||||||||    
T  24305315 cccgaaccttgcatattttatgcattgtccatattaactgagctaagctcacgaagac 24305372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 40853834 - 40853879
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| ||||||||||||||  || ||||||||||||||||||||||    
T  40853834 ccttgcatatattatgcatatttcatatcaactgagctaagctcac 40853879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 40896531 - 40896572
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||| | |||| ||||||||||||||||||||    
T  40896531 atatattatgcattgtctataccaactgagctaagctcacga 40896572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 44694739 - 44694686
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||| |||| ||||||||||||||| | ||||||||||||| |||| ||||||    
T  44694739 cccgagccttgcatatattatgcattgtctatatcaactgagttaagttcacga 44694686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 3349726 - 3349686
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||| |||||| |||||||| ||||||||||||||||||    
T  3349726 catataatatgcaatatttataccaactgagctaagctcac 3349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 5168575 - 5168639
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||  || ||||| |||| |||||||||||||||||   ||||||||||| ||||||||    
T  5168575 gtcggggtttgaaccccgaaccttgcatatattatgcattatccctatcaactgagttaagctca 5168639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 9383208 - 9383272
Alignment:
Q  67 ggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||| ||| ||| | |||| ||||||||||||||| |  ||| ||||||||||||||||||||    
T  9383208 ggggttgaaaccccaaaccttgcatatattatgcattgtccataccaactgagctaagctcacga 9383272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Original strand, 9459079 - 9459119
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||||| | | ||||||||||||||||||||||    
T  9459079 atatattatgcattgtctttatcaactgagctaagctcacg 9459119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 15637642 - 15637598
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||||| |||| || |||| |||||||||||||||||    
T  15637642 cttacatatattatacattgttcatattaactgagctaagctcac 15637598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 23756762 - 23756706
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| |||| ||||| ||||| ||| | |||||||||||||||||||| ||||||||    
T  23756762 ccgaaccttgcatattttatgtattgtctatatcaactgagctaagcttacgaagac 23756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 34345371 - 34345411
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaag 124  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  34345371 ccttacatatattatgtattatctatatcaactgagataag 34345411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 37119271 - 37119319
Alignment:
Q  81 gacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    ||||||| ||||||||||||||| || |||||||||||| ||| |||||    
T  37119271 gacccttgcatatattatgcattgttcatatcaactgagttaaactcac 37119319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 41853410 - 41853370
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaag 124  Q
    |||||||||||||||||||| ||||||||| ||||| ||||    
T  41853410 ccttacatatattatgcattgtttatatcagctgagttaag 41853370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 135
Target Start/End: Complemental strand, 1293 - 1242
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||||||||||||| |  ||||||||||||||||| ||||||||||    
T  1293 ccttacatatattatgcattgtccatatcaactgagctaagttcacgaagac 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 2613787 - 2613720
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||| || ||||| |||||||||| ||||||||| |  ||| ||||||||||||||||||||    
T  2613787 gtcggggttcgaaccccgaaccttacatattttatgcattgtccataccaactgagctaagctcacga 2613720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 3693812 - 3693859
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||||| || | |||||||||||||||||||||||||    
T  3693812 ccttacatatattatgctttgtctatatcaactgagctaagctcacga 3693859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 10293001 - 10292930
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||||||| ||| |||| ||||||||||||||||||||| |   ||||||||||| |||||||||| ||||    
T  10293001 gtcggggtttaaaccccgtcccttacatatattatgcattgtccctatcaactgagttaagctcacggagac 10292930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 13401662 - 13401591
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||  || ||||| |||||||||||||||||||| | | |||||||||| |||||||||| |||||    
T  13401662 gtcggggtttgaaccccgaaccttacatatattatgcattgtctctatcaactgaactaagctcacaaagac 13401591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 50372383 - 50372420
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctc 127  Q
    |||||||||||||| |||||||||||||||||||||||    
T  50372383 atatattatgcattgtttatatcaactgagctaagctc 50372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 52441509 - 52441574
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||  |||  |||| ||||||||||||||| | |||| ||||||||||||||||||||    
T  52441509 cggggttcaaacgccggaccttgcatatattatgcattgtctataccaactgagctaagctcacga 52441574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 7308448 - 7308484
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7308448 ttatgcattatctatatcaactgagctaagctcacga 7308484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 16967210 - 16967262
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacg 136  Q
    |||| ||||||||||||||| |  ||||||||| |||||||||||||||||||    
T  16967210 ccttgcatatattatgcattgtccatatcaactaagctaagctcacgaagacg 16967262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 131
Target Start/End: Original strand, 48681944 - 48681996
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||| ||||||||||||||| || ||| ||||||||||||||||||||    
T  48681944 ccgaaccttgcatatattatgcattgttcataccaactgagctaagctcacga 48681996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 3528485 - 3528532
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||||||||| |||| ||| ||||||||||||||| |||||||    
T  3528485 ccttacatatattatacattgtttctatcaactgagctaaactcacga 3528532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 13794524 - 13794571
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||| |||||||||||||||||   |||||||||||||||||||||||    
T  13794524 ccttgcatatattatgcattatccttatcaactgagctaagctcacga 13794571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 17917134 - 17917205
Alignment:
Q  64 gtcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||||||||  || ||||| |||||||||| ||||||||| |  |||||||||||||||| ||||| |||||    
T  17917134 gtcggggtttgaatcccgaaccttacatattttatgcattgtccatatcaactgagctaaactcacaaagac 17917205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 135
Target Start/End: Original strand, 31759909 - 31759960
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    |||| |||||||||||||||||  ||||||| |||| |||||||||||||||    
T  31759909 ccttgcatatattatgcattatccatatcaattgagttaagctcacgaagac 31759960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 32826721 - 32826768
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||||||| || ||||||| ||||||| ||||    
T  32826721 ccttacatatattatgcattatttttaccaactgaactaagctaacga 32826768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 36371056 - 36371103
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||||||| | | || ||||||||||||||||||||    
T  36371056 ccttacatatattatgcattgtctctaccaactgagctaagctcacga 36371103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 39252273 - 39252320
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||||||||||||| ||| |  ||||||||||||||||||||||||    
T  39252273 ccttacatatattatgtattgtcgatatcaactgagctaagctcacga 39252320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 128
Target Start/End: Complemental strand, 14426 - 14388
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  14426 atatattatgcattgtttataccaactgagctaagctca 14388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 129
Target Start/End: Original strand, 3393579 - 3393629
Alignment:
Q  79 ccgacccttacatatattatgcattatttatatcaactgagctaagctcac 129  Q
    |||| |||| ||||||||||||||| || |||||||||||||||| |||||    
T  3393579 ccgaaccttgcatatattatgcattgttcatatcaactgagctaaactcac 3393629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 21965919 - 21965953
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcac 129  Q
    |||||||||||| ||||||||||||||||||||||    
T  21965919 ttatgcattattcatatcaactgagctaagctcac 21965953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 135
Target Start/End: Original strand, 29701337 - 29701387
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||||||||||||||||| |  ||||||||| || |||||||||||||||    
T  29701337 cttacatatattatgcattgtccatatcaactaagttaagctcacgaagac 29701387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 32950777 - 32950823
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||| ||||||||||||||| |||||| |||||||| ||||||||||    
T  32950777 ccttgcatatattatgcattgtttataccaactgagttaagctcacg 32950823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 34485922 - 34485876
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||||||||    |||||||||||||||||||||    
T  34485922 ccttacatatattatgcattatccccatcaactgagctaagctcacg 34485876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 41182623 - 41182669
Alignment:
Q  85 cttacatatattatgcattatttatatcaactgagctaagctcacga 131  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||||||    
T  41182623 cttacacatattatgcattattcataccaactgagttaagctcacga 41182669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 18551636 - 18551701
Alignment:
Q  65 tcggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||| |||| ||| | |||||| |||||| |||  ||| |||||||||||||||||||    
T  18551636 tcggggttcaaaccccggcccctgcatataatatgcaatatccataccaactgagctaagctcacg 18551701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 21016022 - 21015965
Alignment:
Q  69 ggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagct 126  Q
    ||||| || ||||| |||||||||||||||||||| ||  || |||||||||||||||    
T  21016022 ggttcgaaccccgaaccttacatatattatgcattgttcttaccaactgagctaagct 21015965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 26755661 - 26755608
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    |||| ||||||| ||||||| |  |||||||||||||||||||||||| |||||    
T  26755661 ccttgcatatataatgcattgtccatatcaactgagctaagctcacgaggacga 26755608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 37383801 - 37383858
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| ||||| ||||||||||||||||  | | ||||||| ||||||||||||||||    
T  37383801 cccgaaccttagatatattatgcattatccaaaccaactgaactaagctcacgaagac 37383858  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 12613219 - 12613179
Alignment:
Q  90 atatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||||| ||| |||||||||||| ||||||    
T  12613219 atatattatgcattattcataccaactgagctaaactcacg 12613179  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 18534067 - 18534003
Alignment:
Q  66 cggggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||| || |||||| | |||||||| |||||| ||| | || |||||||||||||||||||    
T  18534067 cggggttcgaaccccgactcctacatataatatgcaatatctctaccaactgagctaagctcacg 18534003  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 27449466 - 27449514
Alignment:
Q  89 catatattatgcattatttatatcaactgagctaagctcacgaagacga 137  Q
    ||||||||||||||| |  |||| ||||||||||||||||||| |||||    
T  27449466 catatattatgcattgtccatattaactgagctaagctcacgaggacga 27449514  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 44184034 - 44183974
Alignment:
Q  68 gggttcaaagcccgacccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    ||||||||| ||| |||||| ||||||| ||||| ||||| |  |||||||||||||||||    
T  44184034 gggttcaaaccccaacccttgcatatataatgcaatatttctgccaactgagctaagctca 44183974  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 45701373 - 45701325
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacgaa 132  Q
    |||||||||| ||||||||| || ||| |||||||||||| ||||||||    
T  45701373 ccttacatattttatgcattgttcataccaactgagctaaactcacgaa 45701325  T

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Target: scaffold0445 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 4515 - 4469
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    |||||||||||||||||||||||  |||||||| || ||||||||||    
T  4515 ccttacatatattatgcattattcctatcaacttagttaagctcacg 4469  T

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Target: scaffold0426 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 5856 - 5902
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctcacg 130  Q
    ||||||||||||||| |||||||  | ||||||||||||||||||||    
T  5856 ccttacatatattatacattattcttttcaactgagctaagctcacg 5902  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Original strand, 42942 - 42999
Alignment:
Q  78 cccgacccttacatatattatgcattatttatatcaactgagctaagctcacgaagac 135  Q
    ||||| |||| ||||||||||||||||||  ||||||||||| |||||| ||| ||||    
T  42942 cccgaaccttgcatatattatgcattattcttatcaactgagttaagctaacggagac 42999  T

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Target: scaffold0768 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 6416 - 6452
Alignment:
Q  95 ttatgcattatttatatcaactgagctaagctcacga 131  Q
    ||||||||| | |||||||||||||||||||||||||    
T  6416 ttatgcattgtctatatcaactgagctaagctcacga 6452  T

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Target: scaffold0057 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 35223 - 35179
Alignment:
Q  84 ccttacatatattatgcattatttatatcaactgagctaagctca 128  Q
    |||||||||||||||||||| | ||||  ||||||||||||||||    
T  35223 ccttacatatattatgcattgtctatactaactgagctaagctca 35179  T

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