View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4987_high_11 (Length: 338)

Name: NF4987_high_11
Description: NF4987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4987_high_11
NF4987_high_11
[»] chr6 (24 HSPs)
chr6 (181-338)||(9953036-9953193)
chr6 (185-338)||(23388995-23389149)
chr6 (185-338)||(23379656-23379810)
chr6 (181-336)||(5739034-5739190)
chr6 (230-336)||(34501463-34501569)
chr6 (182-338)||(2371414-2371570)
chr6 (215-290)||(13004434-13004509)
chr6 (181-262)||(28666095-28666176)
chr6 (181-272)||(10289186-10289277)
chr6 (181-290)||(31071494-31071603)
chr6 (196-251)||(20181288-20181343)
chr6 (196-251)||(22154648-22154703)
chr6 (230-288)||(6512445-6512503)
chr6 (181-218)||(12981151-12981188)
chr6 (231-279)||(12991556-12991604)
chr6 (230-290)||(28112641-28112701)
chr6 (181-220)||(9314765-9314804)
chr6 (181-220)||(21633551-21633590)
chr6 (181-220)||(22463515-22463554)
chr6 (181-220)||(28116940-28116979)
chr6 (183-220)||(9840320-9840357)
chr6 (181-221)||(2378435-2378475)
chr6 (298-330)||(13004611-13004643)
chr6 (181-221)||(15543215-15543255)
[»] chr3 (34 HSPs)
chr3 (181-338)||(35411676-35411834)
chr3 (181-338)||(538015-538172)
chr3 (181-338)||(23299396-23299553)
chr3 (181-338)||(6921890-6922047)
chr3 (181-338)||(16185499-16185656)
chr3 (181-338)||(52198305-52198462)
chr3 (181-338)||(10884018-10884175)
chr3 (181-338)||(18645584-18645741)
chr3 (181-306)||(10107489-10107614)
chr3 (181-272)||(53814971-53815062)
chr3 (181-335)||(29344618-29344773)
chr3 (181-291)||(3839790-3839903)
chr3 (181-272)||(16243166-16243257)
chr3 (182-272)||(9380012-9380102)
chr3 (181-271)||(54460367-54460457)
chr3 (181-271)||(34984668-34984758)
chr3 (181-290)||(19302255-19302364)
chr3 (181-268)||(10880776-10880863)
chr3 (181-272)||(41976321-41976412)
chr3 (189-272)||(54736759-54736842)
chr3 (181-262)||(20729395-20729477)
chr3 (181-285)||(17532565-17532669)
chr3 (184-273)||(43808881-43808970)
chr3 (203-279)||(31548573-31548649)
chr3 (202-283)||(19305445-19305526)
chr3 (203-338)||(22994435-22994570)
chr3 (265-309)||(55032789-55032833)
chr3 (293-338)||(9380143-9380188)
chr3 (181-217)||(31857055-31857091)
chr3 (181-221)||(50462415-50462455)
chr3 (181-220)||(9157508-9157547)
chr3 (181-219)||(2280741-2280779)
chr3 (181-219)||(42355298-42355336)
chr3 (181-221)||(43926124-43926164)
[»] chr5 (26 HSPs)
chr5 (181-338)||(43490793-43490950)
chr5 (181-336)||(32837083-32837238)
chr5 (181-338)||(42061486-42061643)
chr5 (181-338)||(22937898-22938055)
chr5 (181-338)||(37214766-37214923)
chr5 (181-338)||(28442024-28442181)
chr5 (181-338)||(31862872-31863029)
chr5 (181-309)||(14376706-14376834)
chr5 (181-273)||(28788309-28788401)
chr5 (181-290)||(14016927-14017036)
chr5 (181-272)||(21336650-21336742)
chr5 (181-272)||(21827949-21828041)
chr5 (181-290)||(17747617-17747726)
chr5 (183-272)||(39191333-39191422)
chr5 (181-272)||(40916795-40916889)
chr5 (181-272)||(18031710-18031801)
chr5 (186-335)||(4100278-4100431)
chr5 (181-245)||(7270241-7270305)
chr5 (203-262)||(2836702-2836761)
chr5 (181-262)||(30065562-30065643)
chr5 (215-272)||(2837584-2837641)
chr5 (181-228)||(25329456-25329503)
chr5 (230-290)||(7624306-7624366)
chr5 (181-221)||(41307405-41307445)
chr5 (293-338)||(21336564-21336609)
chr5 (232-272)||(33551385-33551425)
[»] chr4 (48 HSPs)
chr4 (181-338)||(15431164-15431321)
chr4 (181-338)||(15437778-15437935)
chr4 (181-338)||(18910604-18910761)
chr4 (181-338)||(33410805-33410962)
chr4 (181-333)||(3798644-3798796)
chr4 (181-331)||(5669628-5669778)
chr4 (181-338)||(5721814-5721971)
chr4 (181-338)||(19865486-19865643)
chr4 (181-336)||(5680469-5680624)
chr4 (181-338)||(9716951-9717108)
chr4 (181-330)||(12237354-12237503)
chr4 (181-299)||(14571026-14571144)
chr4 (182-338)||(19861130-19861286)
chr4 (231-330)||(40617663-40617762)
chr4 (181-331)||(49269735-49269885)
chr4 (181-309)||(37104113-37104241)
chr4 (21-116)||(18449136-18449231)
chr4 (189-272)||(21418987-21419070)
chr4 (230-338)||(53093770-53093878)
chr4 (181-272)||(3718336-3718427)
chr4 (181-272)||(12782106-12782197)
chr4 (189-272)||(40794200-40794283)
chr4 (181-290)||(29323979-29324088)
chr4 (181-290)||(44809795-44809904)
chr4 (181-269)||(44164001-44164090)
chr4 (181-262)||(52007350-52007431)
chr4 (181-272)||(15430674-15430766)
chr4 (181-272)||(15437288-15437380)
chr4 (181-272)||(27013229-27013321)
chr4 (181-262)||(53010377-53010458)
chr4 (181-289)||(56198029-56198137)
chr4 (181-272)||(27677874-27677966)
chr4 (181-272)||(24044966-24045057)
chr4 (181-290)||(56194722-56194831)
chr4 (186-287)||(34320738-34320839)
chr4 (181-272)||(19826701-19826793)
chr4 (181-272)||(27691933-27692025)
chr4 (181-262)||(19819950-19820032)
chr4 (181-290)||(47114776-47114885)
chr4 (181-286)||(15405793-15405898)
chr4 (181-262)||(35509201-35509280)
chr4 (181-290)||(33926121-33926230)
chr4 (231-272)||(37741471-37741512)
chr4 (230-290)||(15812973-15813033)
chr4 (181-221)||(38284375-38284415)
chr4 (181-209)||(17669447-17669475)
chr4 (181-221)||(34018659-34018699)
chr4 (181-221)||(48416408-48416448)
[»] chr7 (23 HSPs)
chr7 (181-338)||(8276012-8276169)
chr7 (181-338)||(26556510-26556667)
chr7 (181-338)||(10431386-10431543)
chr7 (181-336)||(4542074-4542229)
chr7 (181-336)||(2442122-2442277)
chr7 (181-272)||(45288047-45288138)
chr7 (181-272)||(45291383-45291474)
chr7 (181-291)||(20081530-20081640)
chr7 (181-279)||(17729973-17730071)
chr7 (181-272)||(9865551-9865642)
chr7 (181-272)||(9080376-9080467)
chr7 (181-272)||(10344616-10344707)
chr7 (181-272)||(4596833-4596924)
chr7 (181-272)||(4694723-4694814)
chr7 (212-334)||(9273882-9274003)
chr7 (181-290)||(16164889-16164998)
chr7 (181-290)||(48644616-48644725)
chr7 (181-290)||(6602621-6602730)
chr7 (181-250)||(48645852-48645921)
chr7 (181-221)||(37167030-37167070)
chr7 (181-219)||(11826392-11826430)
chr7 (232-262)||(18563366-18563396)
chr7 (181-210)||(13450736-13450765)
[»] chr8 (23 HSPs)
chr8 (181-338)||(45156761-45156918)
chr8 (181-338)||(14420864-14421021)
chr8 (181-338)||(18722152-18722310)
chr8 (181-338)||(10663011-10663168)
chr8 (181-330)||(33878089-33878238)
chr8 (181-338)||(5540838-5540995)
chr8 (185-338)||(25595527-25595681)
chr8 (181-338)||(43682640-43682798)
chr8 (185-338)||(25592342-25592496)
chr8 (216-338)||(25228049-25228169)
chr8 (181-290)||(18826725-18826834)
chr8 (181-335)||(12582218-12582372)
chr8 (21-116)||(15662654-15662749)
chr8 (181-290)||(22174782-22174891)
chr8 (181-272)||(30640505-30640598)
chr8 (181-290)||(14589707-14589816)
chr8 (181-257)||(23612569-23612645)
chr8 (181-272)||(19792926-19793019)
chr8 (181-251)||(5981150-5981220)
chr8 (181-220)||(20261647-20261686)
chr8 (181-220)||(21048277-21048316)
chr8 (234-291)||(38249248-38249305)
chr8 (181-221)||(16952998-16953038)
[»] chr2 (34 HSPs)
chr2 (181-338)||(25869835-25869992)
chr2 (181-338)||(25873203-25873360)
chr2 (181-338)||(26358672-26358829)
chr2 (181-338)||(36809278-36809435)
chr2 (181-338)||(38006129-38006286)
chr2 (181-335)||(16788389-16788542)
chr2 (181-338)||(25139883-25140040)
chr2 (181-338)||(25821760-25821922)
chr2 (181-335)||(30275537-30275691)
chr2 (181-309)||(15466170-15466298)
chr2 (181-272)||(10599951-10600042)
chr2 (181-290)||(38014636-38014745)
chr2 (181-272)||(3874482-3874573)
chr2 (181-290)||(31430529-31430638)
chr2 (181-256)||(5665830-5665905)
chr2 (181-262)||(43722904-43722985)
chr2 (181-269)||(13972725-13972813)
chr2 (181-309)||(29439597-29439723)
chr2 (181-262)||(5104953-5105032)
chr2 (183-272)||(13136764-13136853)
chr2 (184-290)||(36985626-36985732)
chr2 (181-290)||(45453051-45453160)
chr2 (181-262)||(6825974-6826055)
chr2 (181-290)||(45456300-45456409)
chr2 (216-290)||(31428340-31428414)
chr2 (181-221)||(9189532-9189572)
chr2 (181-221)||(37280556-37280596)
chr2 (181-221)||(43208769-43208809)
chr2 (181-219)||(31586785-31586823)
chr2 (181-209)||(1504290-1504318)
chr2 (181-209)||(1507492-1507520)
chr2 (181-221)||(8887842-8887882)
chr2 (181-221)||(25957323-25957363)
chr2 (181-221)||(40780658-40780698)
[»] chr1 (22 HSPs)
chr1 (181-338)||(29644151-29644308)
chr1 (181-338)||(2793299-2793456)
chr1 (181-336)||(1951190-1951345)
chr1 (181-336)||(49499413-49499568)
chr1 (181-279)||(41059135-41059234)
chr1 (181-268)||(2404722-2404809)
chr1 (181-290)||(45961598-45961707)
chr1 (182-290)||(27537104-27537212)
chr1 (181-272)||(42021721-42021812)
chr1 (181-338)||(34733106-34733262)
chr1 (181-262)||(21019287-21019367)
chr1 (181-272)||(21108302-21108393)
chr1 (181-290)||(31204014-31204123)
chr1 (230-290)||(6071791-6071851)
chr1 (181-220)||(47708778-47708817)
chr1 (181-218)||(22460406-22460443)
chr1 (181-221)||(45940621-45940661)
chr1 (181-220)||(3088696-3088735)
chr1 (181-210)||(22454290-22454319)
chr1 (181-218)||(49147113-49147150)
chr1 (181-221)||(28110283-28110323)
chr1 (181-221)||(37184743-37184783)
[»] scaffold0035 (1 HSPs)
scaffold0035 (181-331)||(61597-61747)
[»] scaffold0005 (2 HSPs)
scaffold0005 (181-299)||(246232-246350)
scaffold0005 (192-338)||(290974-291120)
[»] scaffold0015 (1 HSPs)
scaffold0015 (181-297)||(197242-197358)
[»] scaffold0757 (1 HSPs)
scaffold0757 (181-272)||(4563-4654)
[»] scaffold0080 (1 HSPs)
scaffold0080 (204-338)||(26277-26402)
[»] scaffold0270 (3 HSPs)
scaffold0270 (181-272)||(969-1060)
scaffold0270 (181-272)||(4329-4420)
scaffold0270 (181-272)||(11459-11550)
[»] scaffold0334 (1 HSPs)
scaffold0334 (181-305)||(18463-18588)
[»] scaffold0381 (1 HSPs)
scaffold0381 (181-272)||(6462-6554)
[»] scaffold0045 (1 HSPs)
scaffold0045 (181-287)||(88965-89071)
[»] scaffold0520 (1 HSPs)
scaffold0520 (181-271)||(4790-4880)
[»] scaffold1993 (1 HSPs)
scaffold1993 (181-272)||(1045-1136)
[»] scaffold1684 (1 HSPs)
scaffold1684 (181-286)||(369-474)
[»] scaffold0567 (1 HSPs)
scaffold0567 (181-220)||(7016-7055)


Alignment Details
Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 9953036 - 9953193
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9953036 tgatgacagtctgtcatttcac-atttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 9953134  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  9953135 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagcaca 9953193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 23389149 - 23388995
Alignment:
Q  185 gacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 283  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| |||||||||| ||||||  ||| ||||||||||||||||||||    
T  23389149 gacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacagcaaagaaaacaagaaaaatagaagatttt 23389051  T
Q  284 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
     |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  23389050 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 23388995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 23379810 - 23379656
Alignment:
Q  185 gacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 283  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  23379810 gacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 23379712  T
Q  284 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
     |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  23379711 tgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 23379656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 5739190 - 5739034
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt--atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaag 278  Q
    |||||||||||||||||||||||||||||| || |||||  ||||||| | ||||||||||||||||  ||| ||||||  ||| |||||||||||||||    
T  5739190 tgatgacagtcagtcattcactatttttagagttttttttcatgatatgt-tgagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaag 5739092  T
Q  279 attttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  5739091 attttgaagaaagcaaaatcgtgtcacgattgttaaaaacatgtcacgatttggagca 5739034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 34501463 - 34501569
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatt 329  Q
    |||||||||||||||| |||| ||||||  ||| ||||||||| |||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  34501463 tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaagattttgatgaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatt 34501562  T
Q  330 tggagca 336  Q
    |||||||    
T  34501563 tggagca 34501569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 338
Target Start/End: Original strand, 2371414 - 2371570
Alignment:
Q  182 gatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||| ||| ||| |||||||||||||| ||| ||||| ||||||||| |||||||| ||||||| |||| ||||||  ||| |||||||||||||||||    
T  2371414 gatgatagttagttattcactatttttaatgttttttttatgatattt-tgagttcataagcaagtttaaacagcaaataaaacaagaaaaatagaagat 2371512  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||| |||||||||| ||||| || ||  ||||| |||||||    
T  2371513 tttgaagaaagcaaaatcgtatcacgattgttgaaaatgtatcgagatttagagcaca 2371570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 290
Target Start/End: Original strand, 13004434 - 13004509
Alignment:
Q  215 tttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13004434 tttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaa 13004509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 28666176 - 28666095
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28666176 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaa 28666095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 10289186 - 10289277
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||||||    
T  10289186 tgatgacagtaagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaaa 10289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 31071494 - 31071603
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||| ||||||||||| || |||| ||| || |||||||| ||||    
T  31071494 tgatgacagtcagtcattctttatttttagtgtcattttcatgatgttt-tgagttcacgagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 31071592  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  31071593 ttttgaagaaa 31071603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 20181288 - 20181343
Alignment:
Q  196 attcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaag 251  Q
    |||| |||||||||| ||| |||| |||||||| ||||||||||||||||||||||    
T  20181288 attcgctatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 20181343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 22154703 - 22154648
Alignment:
Q  196 attcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaag 251  Q
    |||| |||||||||| ||| |||| |||||||| ||||||||||||||||||||||    
T  22154703 attcgctatttttagagtccttttgtgatatttttgagttcacaagcaagcttaag 22154648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 288
Target Start/End: Original strand, 6512445 - 6512503
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaaga 288  Q
    ||||||||||||||||||||| ||||||| ||| || ||||| | ||||||||||||||    
T  6512445 tgagttcacaagcaagcttaaacagcaaggaaaacatgaaaagttgaagattttgaaga 6512503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 12981188 - 12981151
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt 218  Q
    |||||||||||||||||||||||||||||| |||||||    
T  12981188 tgatgacagtcagtcattcactatttttagagtctttt 12981151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 279
Target Start/End: Complemental strand, 12991604 - 12991556
Alignment:
Q  231 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||| || |||||||| |||||||||| |||||    
T  12991604 gagttcacaagcaagcttaatcaacaagaaaagcaagaaaaattgaaga 12991556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 28112701 - 28112641
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    |||||||||||||||||||||  |||||| ||| || ||||| | ||||||||||||||||    
T  28112701 tgagttcacaagcaagcttaaaaagcaaggaaagcatgaaaagttgaagattttgaagaaa 28112641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 9314804 - 9314765
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  9314804 tgatgacagtcagtcatacactatttttagagtcttttta 9314765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 21633551 - 21633590
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  21633551 tgatgacagtcagtcatacactatttttagagtcttttta 21633590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 22463515 - 22463554
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  22463515 tgatgacagtcagtcatacactatttttagagtcttttta 22463554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 28116940 - 28116979
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  28116940 tgatgacagtcagtcatacactatttttagagtcttttta 28116979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 9840357 - 9840320
Alignment:
Q  183 atgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  9840357 atgacagccagtcattcactatttttagagtcttttta 9840320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 2378435 - 2378475
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  2378435 tgatgacagtccgtcattcgctatttttagagtctttttat 2378475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 330
Target Start/End: Complemental strand, 13004643 - 13004611
Alignment:
Q  298 cgtgtcacgattgtcgaaaacgtgtcacgattt 330  Q
    |||||||||||||| ||||||||||||||||||    
T  13004643 cgtgtcacgattgttgaaaacgtgtcacgattt 13004611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 15543215 - 15543255
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  15543215 tgatgacagtccgtcattcgctatttttagagtctttttat 15543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 9e-61; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 35411676 - 35411834
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||| |||||| ||  |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  35411676 tgatgacagtctgtcatttcaacatttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaagaaaacaaagaaaaatagaaga 35411775  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  35411776 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggaacaca 35411834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 538015 - 538172
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |||| ||||||  ||| ||||||||||||||||    
T  538015 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaaacaagtttaaacagcaaagaaaacaagaaaaatagaaga 538113  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  538114 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 538172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 23299553 - 23299396
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  23299553 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 23299455  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23299454 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacaatttggagcaca 23299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 6921890 - 6922047
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||| ||||| ||||    
T  6921890 tgatgacagtcagtcattcactatttttagagcctttttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatataaga 6921988  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921989 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 6922047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 16185656 - 16185499
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||| |||||||   |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  16185656 tgatgacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatataagat 16185557  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||    
T  16185556 tttgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcacgttttagagcaca 16185499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 52198305 - 52198462
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  52198305 tgatgacagtcagtcattcactatgtttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 52198403  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  52198404 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttagagcaca 52198462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 10884018 - 10884175
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||| ||||||||||||    
T  10884018 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagcaagtttaaacagcaatgaaaacaaaaaaaatagaaga 10884116  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  10884117 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacctgtcacgatttgaagcaca 10884175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 18645741 - 18645584
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||||| ||||||||||| |||| ||||||||||  ||||||||| ||||||||| ||||||  ||| ||||||||||||||||    
T  18645741 tgatgacaatcagtcattcactgtttttagtgtcattttcatgatatttca-agttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaaga 18645643  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  18645642 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcaca 18645584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 306
Target Start/End: Complemental strand, 10107614 - 10107489
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  10107614 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaatagaaga 10107516  T
Q  280 ttttgaagaaagcaaaatcgtgtcacg 306  Q
    |||||||||||||||||||||||||||    
T  10107515 ttttgaagaaagcaaaatcgtgtcacg 10107489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 53814971 - 53815062
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  53814971 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 53815062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 29344773 - 29344618
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttt-ttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  29344773 tgatgacagtcagtcattcactatttttagagtctttcttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaattgaaga 29344674  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcg-aaaacgtgtcacgatttggagc 335  Q
       |||| ||||    |||||||||||||| | | |||||||| |||||||||||||    
T  29344673 aactgaaaaaag-gggatcgtgtcacgattattgaaaaacgtgacacgatttggagc 29344618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 291
Target Start/End: Original strand, 3839790 - 3839903
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt---atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaa 277  Q
    |||||||||||||||||||||||||||||| || |||||   ||||||||| ||||||||||||||||||||||||||||||||| |||||||||  |||    
T  3839790 tgatgacagtcagtcattcactatttttagagtttttttttaatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaaccgaa 3839889  T
Q  278 gattttgaagaaag 291  Q
    ||  ||||||||||    
T  3839890 gaaattgaagaaag 3839903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 16243166 - 16243257
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  16243166 tgatgacaatcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 16243257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 9380012 - 9380102
Alignment:
Q  182 gatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  9380012 gatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcaataagaaaagcaagaaaaa 9380102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 271
Target Start/End: Original strand, 54460367 - 54460457
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 271  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| ||||||||  |||||||    
T  54460367 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaatcttaagcaacaagaaaagaaagaaaa 54460457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 34984758 - 34984668
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 271  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||    
T  34984758 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcaacaagaaaagcaagaaaa 34984668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 19302364 - 19302255
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||| |||| ||||||   ||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||| ||| | |||||||||||||||    
T  19302364 tgatgatagtccgtcatttcatatttttagagtctttttatgatatttttgagttcacaagcaagcttaaacaacaaggaaagcgagaaaaatagaagat 19302265  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  19302264 tttgaagaaa 19302255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 10880776 - 10880863
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaaga 268  Q
    |||||||||||||| |||  |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||    
T  10880776 tgatgacagtcagttatttgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaaga 10880863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 41976321 - 41976412
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| || ||||||| |||||| |||||||||||||||| |||| ||||||||||| ||| |||||    
T  41976321 tgatgacagtcagtcattcgctatttttagagtgtttttataatatttttgagttcacaagcaagattaaacagcaagaaaagcaacaaaaa 41976412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 189 - 272
Target Start/End: Complemental strand, 54736842 - 54736759
Alignment:
Q  189 gtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||| ||| |||||    
T  54736842 gtcaatcattcactatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcaacaagaaaagcaaaaaaaa 54736759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 20729477 - 20729395
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    ||||||||||||||||||| |||||||||| || ||||| ||||||||| | |||||||||||||||||||||||||||||||    
T  20729477 tgatgacagtcagtcattcgctatttttagagttttttttatgatattttttagttcacaagcaagcttaagcagcaagaaaa 20729395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 17532669 - 17532565
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||| ||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||||||| ||||||    
T  17532669 tgattacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaaaagaaga 17532571  T
Q  280 ttttga 285  Q
    ||||||    
T  17532570 ttttga 17532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 43808881 - 43808970
Alignment:
Q  184 tgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaat 273  Q
    ||||||| ||| ||||  ||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||    
T  43808881 tgacagttagttattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaaaaaaaat 43808970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 203 - 279
Target Start/End: Original strand, 31548573 - 31548649
Alignment:
Q  203 atttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||||| |||||    
T  31548573 atttttagagtctttttatgatatttttgagttcacaaccaagcttaagcagtaagaaaagcaagaaaaattgaaga 31548649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 283
Target Start/End: Complemental strand, 19305526 - 19305445
Alignment:
Q  202 tatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 283  Q
    ||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||| ||| | ||||||||||||| ||||    
T  19305526 tatttttagagtctttttataatatttttgagttcacaagcaagcttaaacagcaaggaaagcgagaaaaatagaagttttt 19305445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 338
Target Start/End: Complemental strand, 22994570 - 22994435
Alignment:
Q  203 atttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgt 302  Q
    |||||||||||  | ||||||||||| ||||| ||||||||||||||| ||||||| ||| |||||||||  ||||||| ||  |||||  |||| |||     
T  22994570 atttttagtgtaatattatgatattt-tgagtccacaagcaagcttaaacagcaaggaaagcaagaaaaactgaagattgtggtgaaagtgaaatagtga 22994472  T
Q  303 cacgattgtcg-aaaacgtgtcacgatttggagcaca 338  Q
    |||| |||| | |||||||||||||||||||||||||    
T  22994471 cacggttgttgaaaaacgtgtcacgatttggagcaca 22994435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 309
Target Start/End: Complemental strand, 55032833 - 55032789
Alignment:
Q  265 aagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgatt 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55032833 aagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgatt 55032789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 338
Target Start/End: Original strand, 9380143 - 9380188
Alignment:
Q  293 aaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||    
T  9380143 aaaatcgtgtcacggttgttgaaaacgtgtcacgatttagagcaca 9380188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 31857055 - 31857091
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttt 217  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31857055 tgatgacagtcagtcattcactatttttagagtcttt 31857091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 50462455 - 50462415
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  50462455 tgatgacagtccgtcattcactatttttagagtctttttat 50462415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 9157508 - 9157547
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  9157508 tgatgacagtcagtcatgcactatttttagagtcttttta 9157547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 2280779 - 2280741
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt 219  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  2280779 tgatgacagtcagtcatgcactatttttagagtcttttt 2280741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 42355336 - 42355298
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt 219  Q
    |||||||||||||||||||||||||||||| || |||||    
T  42355336 tgatgacagtcagtcattcactatttttagagttttttt 42355298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 43926124 - 43926164
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  43926124 tgatgacagtccgtcattcgctatttttagagtctttttat 43926164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 43490793 - 43490950
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  43490793 tgatgacagtctgtcatttcac-atttttagagtctttttatgatatttttgagttcacaaacaagcttaagcagcaagaaaagcaagaaaaatagaaga 43490891  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  43490892 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgattaggagcaca 43490950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 32837083 - 32837238
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||  |||||||   |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  32837083 tgatgacagtatgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagaaagaaaaatagaagat 32837182  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  32837183 tttgaagaaagcaaaatcgtgtcatgattgttgaaaacgtgtcacgatttggagca 32837238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 42061486 - 42061643
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  42061486 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaaga 42061584  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  42061585 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcaca 42061643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 22938055 - 22937898
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||| |||||||    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22938055 tgatgacagtctgtcattccacgtttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 22937956  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||||| |||| |||| |||||||| |||||||||||||||||    
T  22937955 tttgaagaaagcaaaatcgtgccacggttgttgaaaacgtatcacgatttggagcaca 22937898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 37214766 - 37214923
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||| |||||| |||||||   |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37214766 tgataacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 37214865  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||| |||| ||||| |||||| |||||||||||||||||||    
T  37214866 tttgaagaaagcaaaatcgtatcacaattgttgaaaacatgtcacgatttggagcaca 37214923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 28442181 - 28442024
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||||||||| ||||    
T  28442181 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga 28442083  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  28442082 ttttgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcaca 28442024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 31862872 - 31863029
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| || |||||| ||||||||||||||||||||| || |||  ||| |||||||||||||| |    
T  31862872 tgatgacagtcagtcattccttatttttagtgtcattttcataatattt-tgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaaa 31862970  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  31862971 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcaca 31863029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 14376834 - 14376706
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  14376834 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaatcaagaaaaatagaaga 14376736  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgatt 309  Q
    |||||| ||||||||| |||||||||||||    
T  14376735 ttttgaggaaagcaaattcgtgtcacgatt 14376706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 28788401 - 28788309
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaat 273  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||    
T  28788401 tgatgacagtcagtcatttgctatttttagagtctttttatgatattttttagttcacaagcaagcttaagcagcaagaaaaacaagaaaaat 28788309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 14017036 - 14016927
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  14017036 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 14016937  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  14016936 tttgaagaaa 14016927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21336742 - 21336650
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  21336742 tgatgacagtcagtcattcactatttttagagtcttttttattatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 21336650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21828041 - 21827949
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||    
T  21828041 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaa 21827949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 17747617 - 17747726
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || |||||||| ||| |||||||| || |||| ||| || |||||||| |||||    
T  17747617 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcataagaaagcttaaacaacaaggaaagcatgaaaaatacaagat 17747716  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  17747717 tttgaagaaa 17747726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 39191333 - 39191422
Alignment:
Q  183 atgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||| |||||   ||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  39191333 atgacagtcaatcatttgttatttttagagtctttttatgatacttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 39191422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 40916889 - 40916795
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt---atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||  |||||||||| ||||||||   || |||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  40916889 tgatgacagtcagtcatttgctatttttagagtcttttttttatcatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 40916795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 18031710 - 18031801
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||| |||| |||||||  ||||||||| |||||||||||||||||  ||||||| ||||||| |||||||||||||||| |||||||||    
T  18031710 tgatgatagtccgtcattccatatttttagagtctttttatgatattttcgagttcaaaagcaagtttaagcagcaagaaaagcaagaaaaa 18031801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 335
Target Start/End: Complemental strand, 4100431 - 4100278
Alignment:
Q  186 acagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttga 285  Q
    ||||||||| |||| ||||||| || ||||||||||||||||| |||||||||| ||||| |||||||||||||||| |||| ||||  |||||   |||    
T  4100431 acagtcagttattcgctatttt-agagtctttttatgatatttttgagttcacaggcaagattaagcagcaagaaaagcaaggaaaactgaagaaactga 4100333  T
Q  286 agaaagcaaa----atcgtgtcacgatt-gtcgaaaacgtgtcacgatttggagc 335  Q
    |||||  |||    ||||||||||||||  || |||||||| |||||||||||||    
T  4100332 agaaaaaaaaagggatcgtgtcacgattactcaaaaacgtgacacgatttggagc 4100278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 7270241 - 7270305
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaag 245  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||    
T  7270241 tgatgacagtctgtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaag 7270305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 2836702 - 2836761
Alignment:
Q  203 atttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  2836702 atttttagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaagaaaa 2836761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 30065562 - 30065643
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||| ||| ||||||  ||||||||| ||||||||||||||||| ||| |||||||||||| ||||||| ||||||||    
T  30065562 tgatgacaatcattcattcgttatttttagagtctttttatgatatttttgaattcacaagcaagattaagcaacaagaaaa 30065643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 272
Target Start/End: Complemental strand, 2837641 - 2837584
Alignment:
Q  215 tttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||  ||||||||||||||||||||||||||| |||| |||||||||    
T  2837641 tttttatgatattttggagttcacaagcaagcttaagcagcaataaaagcaagaaaaa 2837584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 25329456 - 25329503
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatattt 228  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  25329456 tgatgacagtcagtcattcgctatttttagagtttttttatgatattt 25329503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Original strand, 7624306 - 7624366
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    |||||||||| |||||||||| || |||| ||| || |||||||| |||||||||||||||    
T  7624306 tgagttcacaggcaagcttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 7624366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 41307445 - 41307405
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  41307445 tgatgacagtcagtcattcgctatttttagagtctttttat 41307405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 338
Target Start/End: Complemental strand, 21336609 - 21336564
Alignment:
Q  293 aaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||| |||| |||||| ||||||||||| |||||||    
T  21336609 aaaatcgtgtcacggttgttgaaaacatgtcacgatttagagcaca 21336564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 232 - 272
Target Start/End: Original strand, 33551385 - 33551425
Alignment:
Q  232 agttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||| ||| |||||||||||||||| |||||||||    
T  33551385 agttcacaagtaagtttaagcagcaagaaaagcaagaaaaa 33551425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 15431164 - 15431321
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  15431164 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 15431262  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15431263 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 15431321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 15437778 - 15437935
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||| ||||||||||    
T  15437778 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagagaaatagaaga 15437876  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15437877 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 15437935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 18910604 - 18910761
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| || |||  ||| ||||||||||||||||    
T  18910604 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaaacttaaacaacaaagaaagcaagaaaaatagaaga 18910702  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18910703 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcaca 18910761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 33410962 - 33410805
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  33410962 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 33410864  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  33410863 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgttacgatttgaagcaca 33410805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 333
Target Start/End: Complemental strand, 3798796 - 3798644
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  3798796 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaagcaagaaaaatagaaga 3798698  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttgga 333  Q
    ||||||||||||||||||| |||||||||||| ||||| |||||||||||||||    
T  3798697 ttttgaagaaagcaaaatcttgtcacgattgttgaaaatgtgtcacgatttgga 3798644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 5669628 - 5669778
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  5669628 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 5669726  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 331  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  5669727 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaatttg 5669778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 5721971 - 5721814
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||||| ||||||||||| |||| ||||||||||  ||||||||| ||||||||| ||||||  ||| ||||||||||||||||    
T  5721971 tgatgacaatcagtcattcactgtttttagtgtcattttcatgatatttca-agttcacaaacaagcttaaacagcaaagaaaacaagaaaaatagaaga 5721873  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  5721872 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcaca 5721814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 19865643 - 19865486
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  19865643 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 19865545  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||| |||||||||||||||||| | ||||| || |||||||||||||||||    
T  19865544 ttttgaagaaaacaaaatcgtgtcacgattattgaaaatgtatcacgatttggagcaca 19865486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 5680469 - 5680624
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||| | |||||||   |||||||| ||||||||||||||||| |||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  5680469 tgatgacagactgtcattccacatttttagagtctttttatgatatttttgagttcataagcaagcttaaacaacaagaaaagcaagaaaaatagaagat 5680568  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||| |||| |||||    
T  5680569 tttgaaaaaagcaaaatcatgtcacgattgttgaaaacgtgtcacaatttagagca 5680624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 9716951 - 9717108
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||| |||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  9716951 tgatgacagtcggtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 9717049  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||| |||||||||||||||||||||||||||| ||||||||| ||| |||| |||||||    
T  9717050 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacaatttagagcaca 9717108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 330
Target Start/End: Original strand, 12237354 - 12237503
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||||| ||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  12237354 tgatgatagtcattcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaagcaagagaaatagaaga 12237452  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 330  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12237453 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaatgtgtcacaattt 12237503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 299
Target Start/End: Original strand, 14571026 - 14571144
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||| ||| |||||||   |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14571026 tgatgacggtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 14571125  T
Q  281 tttgaagaaagcaaaatcg 299  Q
    |||||||||||||||||||    
T  14571126 tttgaagaaagcaaaatcg 14571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 182 - 338
Target Start/End: Complemental strand, 19861286 - 19861130
Alignment:
Q  182 gatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||| ||| |||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| ||||||  ||| ||||||||||| |||||    
T  19861286 gatggcagacagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacagcaaagaaagcaagaaaaatataagat 19861188  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||  |||||| ||||||||||||| |||||||| |||||||||||||||||    
T  19861187 tttgaagaacacaaaattgtgtcacgattgttgaaaacgtatcacgatttggagcaca 19861130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 231 - 330
Target Start/End: Complemental strand, 40617762 - 40617663
Alignment:
Q  231 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 330  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  40617762 gagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagattttgaagaaggcaaaatcgtgccacgattgttgaaaacgtgtcacgattt 40617663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 49269735 - 49269885
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||    |||||||| || |||||||||||||| ||||||  ||| ||||||||| | ||||  ||| |||||||||||||||||    
T  49269735 tgatgacagtcagtcattttacatttttagagtttttttatgatatttttgagttagcaaacaagcttaaacggcaaagaaagcaagaaaaatagaagat 49269834  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 331  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  49269835 tttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgatttg 49269885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 181 - 309
Target Start/End: Complemental strand, 37104241 - 37104113
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||||| | |||||| || |||| ||||||||| ||||||||||||||||||||| ||||||  ||| ||||||||||||||||    
T  37104241 tgatgacactcagtcattcactgtgtttagtatcattttcatgatattt-tgagttcacaagcaagcttaaacagcaaagaaaacaagaaaaatagaaga 37104143  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgatt 309  Q
    ||||||||||||||||||||||||||||||    
T  37104142 ttttgaagaaagcaaaatcgtgtcacgatt 37104113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 18449136 - 18449231
Alignment:
Q  21 acatcatcatcaacaaattatcacatcattcttagaactacaacatcatctcaatagcactaacatcattaagtaaagatatccaagcacacgact 116  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  18449136 acatcatcatcaacaaatcatcacatcattcttacaactacaacatcatctcaagtgcactaacatcatcaagtaaagatatccaagcacacgact 18449231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 21418987 - 21419070
Alignment:
Q  189 gtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  21418987 gtcagtcattcgctatttttagtgtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 21419070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 230 - 338
Target Start/End: Original strand, 53093770 - 53093878
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatt 329  Q
    ||||||||||||||||||||| ||||||| ||| || ||||| | ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| |    
T  53093770 tgagttcacaagcaagcttaaacagcaaggaaagcatgaaaagttgaagattttgaagaaagtaaaatcgtgacacgattgttgaaaacgtgtcacgaat 53093869  T
Q  330 tggagcaca 338  Q
    |||||||||    
T  53093870 tggagcaca 53093878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 3718336 - 3718427
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||| ||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||    
T  3718336 tgatgacagtcactcattcactatttttagagtatttttatgatatttttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaa 3718427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 12782106 - 12782197
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||    
T  12782106 tgatgacagtcagtcattcgctatttttagagtcattttatgatatttttgagtttacaagcaagcttaagcagcaagaaaagcaagaaaaa 12782197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 40794200 - 40794283
Alignment:
Q  189 gtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  40794200 gtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 40794283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 29323979 - 29324088
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  29323979 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 29324078  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  29324079 tttgaagaaa 29324088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 44809904 - 44809795
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  44809904 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 44809805  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  44809804 tttgaagaaa 44809795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 44164001 - 44164090
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt-tatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaa 269  Q
    |||||||||||||||||||||||||||||  ||||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||||    
T  44164001 tgatgacagtcagtcattcactatttttaaagtcttttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaa 44164090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 52007431 - 52007350
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  52007431 tgatgacagtcagtcattcgctatttttagagtctttttatgatattgttgagttcaaaagcaagcttaagcagcaagaaaa 52007350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 15430766 - 15430674
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||  |||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  15430766 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15430674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 15437380 - 15437288
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||  |||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  15437380 tgatgacagtcagtcattcgttattttcagagtcttttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 15437288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 27013229 - 27013321
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt-tatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||||| ||||||||||||| |||||||| |||||||||    
T  27013229 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 27013321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 53010458 - 53010377
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||    
T  53010458 tgatgatagtcagtcattcattatttttagagtctttttatgatatttttgagttcacaagtaagattaagcagcaagaaaa 53010377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 289
Target Start/End: Original strand, 56198029 - 56198137
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||||||||    
T  56198029 tgatgacagtcagtcattcgttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 56198127  T
Q  280 ttttgaagaa 289  Q
    ||||||||||    
T  56198128 ttttgaagaa 56198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 27677966 - 27677874
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||||||| ||||||||||| |||| |||||||||||||||| ||| |||||    
T  27677966 tgatgacagtcagttattcactatttttagagtcttttttatgatatttttgagttcacaatcaagattaagcagcaagaaaagcaaaaaaaa 27677874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 24045057 - 24044966
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||  ||||||||| |||||||| |||||||| ||||||||||| |||| |||||||||||||||| |||| ||||    
T  24045057 tgatgacagtcagtcattcgttatttttagagtctttttttgatatttttgagttcacaaacaagattaagcagcaagaaaagcaaggaaaa 24044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 56194722 - 56194831
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||| ||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||||||||    
T  56194722 tgatgacagtcaatcattcgttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 56194820  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  56194821 ttttgaagaaa 56194831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 34320839 - 34320738
Alignment:
Q  186 acagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttga 285  Q
    |||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| ||  ||| ||| || |||||||| ||||||||||    
T  34320839 acagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaataaggaaagcatgaaaaatacaagattttga 34320740  T
Q  286 ag 287  Q
    ||    
T  34320739 ag 34320738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19826701 - 19826793
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgata-tttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| |||||||||||| | ||| |||||||||||| ||| ||||||| |||||||| |||||||||    
T  19826701 tgatgacagtcagtcattcgctatttttagagtctttttatgaaattttttgagttcacaagtaagattaagcaacaagaaaagcaagaaaaa 19826793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 27692025 - 27691933
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||| | ||||||||||||||||||| |||||||| | ||||||| ||| |||||||||||| |||||||||||||||| |||||||||    
T  27692025 tgatgacaattagtcattcactatttttagagtcttttttacgatatttttgaattcacaagcaagattaagcagcaagaaaagcaagaaaaa 27691933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 19819950 - 19820032
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgata-tttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    ||||||||||||||||||| |||||||||  |||||||||||||| ||| |||||||||||||||| ||||| ||||||||||    
T  19819950 tgatgacagtcagtcattcgctatttttaaagtctttttatgatattttttgagttcacaagcaagattaagtagcaagaaaa 19820032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 47114776 - 47114885
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| || || ||| ||||||||||||||||||||| ||  ||| ||| || |||||||| ||||    
T  47114776 tgatgacagtcagtcattctttatttttagtgtcattttcattatgttt-tgagttcacaagcaagcttaaacaataaggaaaacatgaaaaatacaaga 47114874  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  47114875 ttttgaagaaa 47114885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 15405898 - 15405793
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||  || |||||||| ||||    
T  15405898 tgatgaaagtcagtcattctttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaaga 15405800  T
Q  280 ttttgaa 286  Q
    |||||||    
T  15405799 ttttgaa 15405793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 35509201 - 35509280
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||| ||||||||||||||  ||||||||||  |||| |||||||||| |||||||||||||||| ||||||| ||||||||    
T  35509201 tgataacagtcagtcattcgttatttttagt--ctttatatgatatttttgagttcacaagcaagattaagcaacaagaaaa 35509280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 33926121 - 33926230
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||||||   || |||||||||| |||  ||||| | | ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  33926121 tgatgacagtcagtcatttgttacttttagtgtcatttgcatgatgtct-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 33926219  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  33926220 ttttgaagaaa 33926230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 37741512 - 37741471
Alignment:
Q  231 gagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||| ||||||||||| |||||||||    
T  37741512 gagttcacaagcaagcttaaacagcaagaaaaacaagaaaaa 37741471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 15813033 - 15812973
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    |||||||||||||||| |||| || |||| ||| || |||||||| |||||||||||||||    
T  15813033 tgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 15812973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 38284415 - 38284375
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  38284415 tgatgacagtcagtcattcgctatttttagagtctttttat 38284375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 209
Target Start/End: Original strand, 17669447 - 17669475
Alignment:
Q  181 tgatgacagtcagtcattcactattttta 209  Q
    |||||||||||||||||||||||||||||    
T  17669447 tgatgacagtcagtcattcactattttta 17669475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 34018699 - 34018659
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  34018699 tgatgacagtccgtcattcgctatttttagagtctttttat 34018659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 48416448 - 48416408
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  48416448 tgatgacagtccgtcattcgctatttttagagtctttttat 48416408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 9e-58; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 8276012 - 8276169
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||| |||||||  ||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  8276012 tgatgacagtctgtcattccatatttttagagtctttttatgatatttttgagttcacaagcaagctcaagcagcaagaaaagcaagaaaaatagaagat 8276111  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||| ||||||||||||| |||||| |||||||| |||||||||||||||||    
T  8276112 tttgaagaaaacaaaatcgtgtcatgattgttgaaaacgtatcacgatttggagcaca 8276169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 26556510 - 26556667
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||||||||||||||    
T  26556510 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaagcaagaaaaatagaaga 26556608  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  26556609 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttagagcaca 26556667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 10431386 - 10431543
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||||||||| ||||    
T  10431386 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatataaga 10431484  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  10431485 ttttgaagaaagcaaaattgtgtcacgattgttgaaaacgtgtcacgatttagagcaca 10431543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 4542074 - 4542229
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  4542074 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 4542172  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    |||||| ||||||||| | ||||||||||||| ||||| |||||| |||||||||||    
T  4542173 ttttgaggaaagcaaatttgtgtcacgattgttgaaaatgtgtcatgatttggagca 4542229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 2442277 - 2442122
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  2442277 tgatgacagtcagtcattcactattttaagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 2442179  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    || ||| ||||||||| ||||||||||||||| |||||||| |||||||||| ||||    
T  2442178 ttctgaggaaagcaaattcgtgtcacgattgttgaaaacgtatcacgatttgaagca 2442122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 45288138 - 45288047
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45288138 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45288047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 45291474 - 45291383
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  45291474 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 45291383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 20081640 - 20081530
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||     
T  20081640 tgatgacagtcagtcattcactatttttagagtgtttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatcaaagaa 20081541  T
Q  281 tttgaagaaag 291  Q
     ||||||||||    
T  20081540 attgaagaaag 20081530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 181 - 279
Target Start/End: Original strand, 17729973 - 17730071
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  17729973 tgatgacagtcagtctttcactatttttagagtccttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatcgaaga 17730071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 9865642 - 9865551
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||    
T  9865642 tgatgacagtcagtcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaagcaagaaaaa 9865551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 9080376 - 9080467
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||| ||||||||  ||||||||| |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||    
T  9080376 tgatgacagttagtcattcgttatttttagagtctttttatgtaatttttgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 9080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 10344616 - 10344707
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||| |||||| |||| |||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||||||| ||| |||||    
T  10344616 tgatgactgtcagtaattcgctatttttagagtcttcttatgaaatttttgagttcacaagcaagcttaagcagcaagaaaagcaaaaaaaa 10344707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 4596924 - 4596833
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||| |||| ||||||| ||| ||||||| |||||||| |||||||||    
T  4596924 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagctcacaagaaagattaagcaacaagaaaagcaagaaaaa 4596833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4694723 - 4694814
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||| |||||||||||   ||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||  ||||||||    
T  4694723 tgatgaaagtcagtcatttgttatttttagagtctttctatgatatttttgagttcacaagcaagattaagcagcaagaaaagtaagaaaaa 4694814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 334
Target Start/End: Complemental strand, 9274003 - 9273882
Alignment:
Q  212 gtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgt 311  Q
    |||||||||||||||||  ||||||||||||||||||||||| ||||||||  ||||||| | |||||   |||||||||   |||| ||||||||||      
T  9274003 gtctttttatgatattttggagttcacaagcaagcttaagcaccaagaaaagaaagaaaagttgaagaaactgaagaaag-ggaatcatgtcacgattac 9273905  T
Q  312 cgaaaacgtgtcacgatttggag 334  Q
     ||||||||||||||||||||||    
T  9273904 tgaaaacgtgtcacgatttggag 9273882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 16164889 - 16164998
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||  |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  16164889 tgatgacagtcagtcattcgttatttttagtgtaattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 16164987  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  16164988 ttttgaagaaa 16164998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 48644616 - 48644725
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| || || ||| ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  48644616 tgatgacagtcagtcattctttatttttagtgtcattttcataatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 48644714  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  48644715 ttttgaagaaa 48644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 6602621 - 6602730
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| | || || || ||| | ||||||||||||||||||| || |||| |||  | |||||||| ||||    
T  6602621 tgatgacagtcagtcattcgttatttttagtgtcatgttcataatgttt-taagttcacaagcaagcttaaacaacaaggaaagtatgaaaaatacaaga 6602719  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  6602720 ttttgaagaaa 6602730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 48645921 - 48645852
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttctgagttcacaagcaagcttaa 250  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  48645921 tgatgacagtcagtcattctttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaa 48645852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 37167070 - 37167030
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  37167070 tgatgacagtcagtcattcgctatttttagagtctttttat 37167030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 11826430 - 11826392
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt 219  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  11826430 tgatgacagtcagtcatgcactatttttagagtcttttt 11826392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 262
Target Start/End: Complemental strand, 18563396 - 18563366
Alignment:
Q  232 agttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||||||||||||||||||||||||||    
T  18563396 agttcacaagcaagcttaagcagcaagaaaa 18563366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 13450765 - 13450736
Alignment:
Q  181 tgatgacagtcagtcattcactatttttag 210  Q
    ||||||||||||||||||||||||||||||    
T  13450765 tgatgacagtcagtcattcactatttttag 13450736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 2e-55; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 45156918 - 45156761
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||   ||||||  ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  45156918 tgatgacagtttatcattctatatttttagagtctttttatgatatttttgagttcacaagcaagctttagcagcaagaaaagcaagaaaaatagaagat 45156819  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  45156818 tttgaagaaagcacaatcgtgtcacgattgttgaaaatgtgtcacgatttggagcaca 45156761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 14420864 - 14421021
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||||||||  ||||||   |||||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  14420864 tgatgacagtctctcattccacatttttagagtctttttatgatattttttagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatataagat 14420963  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  14420964 tttgaagaaagcaaaatcgtatcacgattgttgaaaacgtgtcacgatttggaacaca 14421021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 18722310 - 18722152
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  18722310 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 18722212  T
Q  280 tttt-gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18722211 tttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 18722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 10663011 - 10663168
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||  ||| ||||||  ||| ||||||||||||||||    
T  10663011 tgatgacagtcagtcattcactatttttagagtctttttcatgatatgt-tgagttcacaagcaagtctaaacagcaaagaaagcaagaaaaatagaaga 10663109  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||    
T  10663110 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacatgtcatgatttggagcaca 10663168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 330
Target Start/End: Complemental strand, 33878238 - 33878089
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||| |||| ||||||  ||| ||||||||||||||||    
T  33878238 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagaaagtttaaacagcaaagaaaacaagaaaaatagaaga 33878140  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgattt 330  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  33878139 ttttgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacaattt 33878089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 5540995 - 5540838
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||  |||||||   |||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  5540995 tgatgacagtttgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaagacaagtaagaaaaatagaagat 5540896  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||||||||| ||||||    
T  5540895 tttgaaggaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttgaagcaca 5540838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 25595681 - 25595527
Alignment:
Q  185 gacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 283  Q
    |||||||||||||||| | ||||||||||| |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  25595681 gacagtcagtcattcattgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25595583  T
Q  284 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  25595582 tgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 25595527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 43682798 - 43682640
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt--atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaag 278  Q
    ||||| ||||||||||||||||||||||||| || ||||  ||||||||| |||||||| ||||||| |||| ||||||  ||| |||||||||||||||    
T  43682798 tgatggcagtcagtcattcactatttttagtatcatttttcatgatattt-tgagttcataagcaagtttaaacagcaaagaaagcaagaaaaatagaag 43682700  T
Q  279 attttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| ||||    
T  43682699 attttgaagaaagcaaaatcgtgtcacgattattgaaaacgtgtcacaatttggaacaca 43682640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 185 - 338
Target Start/End: Complemental strand, 25592496 - 25592342
Alignment:
Q  185 gacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatttt 283  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||||||    
T  25592496 gacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaagatttt 25592398  T
Q  284 -gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
     |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  25592397 tgaagaaagcaaaatcgtgtcacgattgttgaaaatgtgtcccgatttggagcaca 25592342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 216 - 338
Target Start/End: Original strand, 25228049 - 25228169
Alignment:
Q  216 ttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtcacgattgtcgaa 315  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||  ||||||||||| ||||||  |||    
T  25228049 ttttatgatatttttgagttcacaagcaagctcaagaagcaagaaaaacaagaaaaatagaagattttgaagaaa--aaaatcgtgtctcgattgctgaa 25228146  T
Q  316 aacgtgtcacgatttggagcaca 338  Q
    |||||||||||||||||||||||    
T  25228147 aacgtgtcacgatttggagcaca 25228169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 18826834 - 18826725
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||| ||||| || |||| ||| || |||||||| |||||    
T  18826834 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaaacttaaacaacaaggaaagcatgaaaaatacaagat 18826735  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  18826734 tttgaagaaa 18826725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 12582218 - 12582372
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||| | ||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||| |||||||| ||||||| |||||||||  |||||     
T  12582218 tgatgaaaatcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagaaagaaaagcaagaaaaactgaagaa 12582317  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcg-aaaacgtgtcacgatttggagc 335  Q
      |||| ||||    |||||||||||||| | | ||||||||||||||||||||||    
T  12582318 actgaaaaaag-gggatcgtgtcacgattattgaaaaacgtgtcacgatttggagc 12582372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 15662749 - 15662654
Alignment:
Q  21 acatcatcatcaacaaattatcacatcattcttagaactacaacatcatctcaatagcactaacatcattaagtaaagatatccaagcacacgact 116  Q
    ||||||||||||| |||| ||||||||||||||| ||||||||||| |||| ||  |||||| |||||| ||||||| ||||||||||||||||||    
T  15662749 acatcatcatcaataaatcatcacatcattcttacaactacaacattatctaaagtgcactagcatcatcaagtaaatatatccaagcacacgact 15662654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 22174891 - 22174782
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||| |||||| |||||| |||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  22174891 tgatgacagtcagccattcattatttt-agtgtcattttcatgatgtttttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 22174793  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  22174792 ttttgaagaaa 22174782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 30640505 - 30640598
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt--tatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||| |||||||||||||| ||  ||||||  ||||||| || ||||||||||||||||||||||||||||||||  |||||||||    
T  30640505 tgatgacagtcaatcattcactattttaagaatctttttttatgatacttttgagttcacaagcaagcttaagcagcaagaaatgcaagaaaaa 30640598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 14589816 - 14589707
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||| ||||||||| ||||||||||||| |||| ||||| ||| ||||||||||||||||||||  || |||| ||| || |||||||| ||||    
T  14589816 tgatgatagttagtcattcattatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttacacaacaaggaaagcatgaaaaatacaaga 14589718  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  14589717 ttttgaagaaa 14589707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 257
Target Start/End: Original strand, 23612569 - 23612645
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttctgagttcacaagcaagcttaagcagcaa 257  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||| |||||||||||||||| |||| ||||||    
T  23612569 tgatgacagtcagtcattcactatttttagtgtcattttgatgagattt-tgagttcacaagcaagtttaaacagcaa 23612645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 19792926 - 19793019
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttctgagttcacaagc-aagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||| | |||||||||||||||| ||| |||||||||||||| ||||||||||||| ||| |||| || |||||||| | |||||||    
T  19792926 tgatgacagtcggccattcactatttttagagtcttttttatgatatttttgagttcacaagcaaagattaaacaacaagaaaagctagaaaaa 19793019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 251
Target Start/End: Complemental strand, 5981220 - 5981150
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaag 251  Q
    ||||||||||| |||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  5981220 tgatgacagtccgtcatttcac-atttttagagtctttttatgatatttttgagttcacaagcaagtttaag 5981150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 20261647 - 20261686
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  20261647 tgatgacagtcagtcatacactatttttagagtcttttta 20261686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Original strand, 21048277 - 21048316
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  21048277 tgatgacagtcagtcatacactatttttagagtcttttta 21048316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 291
Target Start/End: Complemental strand, 38249305 - 38249248
Alignment:
Q  234 ttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaag 291  Q
    ||||||||||||||||| ||||||| ||| || ||||| |  ||||||||||||||||    
T  38249305 ttcacaagcaagcttaaacagcaaggaaaacatgaaaagttaaagattttgaagaaag 38249248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 16952998 - 16953038
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  16952998 tgatgacagtccgtcattcgctatttttagagtctttttat 16953038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 25869835 - 25869992
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||| |||| || |||  ||| ||||| ||||||||||    
T  25869835 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagaaagtttaaacaacaaagaaaacaagagaaatagaaga 25869933  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25869934 ttttgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 25869992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 25873203 - 25873360
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||| ||||||||||    
T  25873203 tgatgacagtcagtcattcactatttttagagtctttttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaaacaagagaaatagaaga 25873301  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  25873302 ttttgaagaaagaaaaatcgtgtcacgattgtcgaaaacgtgtcatgatttggagcaca 25873360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 26358672 - 26358829
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||| |||| ||||||  ||  ||||||||||||||||    
T  26358672 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaaggaagtttaaacagcaaagaagacaagaaaaatagaaga 26358770  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  26358771 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtggcacgatttggagcaca 26358829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 36809435 - 36809278
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||| || |||  ||| ||||||||||||||||    
T  36809435 tgatgacagtcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaaga 36809337  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||| ||||||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  36809336 ttttgaggaaagcaaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 36809278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 38006286 - 38006129
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||| ||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||| ||||||||| || |||  ||| ||||| ||||||||||    
T  38006286 tgattacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaaacaagcttaaacaacaaagaaagcaagagaaatagaaga 38006188  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38006187 ttttgaagaaagcaaaatcgtgtgacgattgtcgaaaacgtgtcacgatttggagcaca 38006129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 181 - 335
Target Start/End: Original strand, 16788389 - 16788542
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  ||||||||||  |||||| |||||| || |||||||||||||||||||||||| |||||||| ||||||||||| |||||    
T  16788389 tgatgacagtcagtcatttgctatttttagaatctttt-atgataattttgagttcacaagcaagcttaagcaacaagaaaagcaagaaaaatataagat 16788487  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagc 335  Q
    ||||| ||||||| ||||||||||||||||| |||||||||||||||||| ||||    
T  16788488 tttgatgaaagcacaatcgtgtcacgattgttgaaaacgtgtcacgatttagagc 16788542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 25140040 - 25139883
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||||||||||||||||   | |||||| || |||||||||||||| |||||||||||| |||||||| | ||||  ||| |||||||||||||||||    
T  25140040 tgatgacagtcagtcattccacaattttagagtttttttatgatatttttgagttcacaagtaagcttaaacggcaaagaaagcaagaaaaatagaagat 25139941  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    || |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  25139940 ttcgaagaaagcaaaatcgtgtcacgattgttgacaacgtgtcacgatttggagcaca 25139883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 25821922 - 25821760
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatat---ttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaataga 276  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||||   || ||||||||||||||||||||| || |||  ||| |||||||||||||    
T  25821922 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatatatattttgagttcacaagcaagcttaaacaacaaagaaaacaagaaaaataga 25821823  T
Q  277 agatttt-gaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||| ||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||    
T  25821822 agatttttgaagaaagcaaaatcgtgtcaagattgttgaaaaggtgtcacgatttggaacaca 25821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 181 - 335
Target Start/End: Complemental strand, 30275691 - 30275537
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||||||||||||| ||||||||||||| |||| ||||||||| ||| ||||||| |||| |||| || |||  ||| ||||||||||||||||    
T  30275691 tgatgatagtcagtcattcaatatttttagtgtcattttcatgatattt-tgaattcacaaacaagtttaaacaacaaagaaaacaagaaaaatagaaga 30275593  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagc 335  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  30275592 ttttgaggaaagcaaattcgtgtcacgattgttgaaaacgtgtcacgatttggagc 30275537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 15466170 - 15466298
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  15466170 tgatgacaatcagtcattcactatttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaaga 15466268  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgatt 309  Q
    ||||||||||||||||||||||||||||||    
T  15466269 ttttgaagaaagcaaaatcgtgtcacgatt 15466298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 10599951 - 10600042
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  10599951 tgatgacagtcagtcattcactatttttagaatctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaaacaagaaaaa 10600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 38014636 - 38014745
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  38014636 tgatgacagtcagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 38014735  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  38014736 tttgaagaaa 38014745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 3874482 - 3874573
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||||||| |||| |||||||||||||||| |||||||||    
T  3874482 tgatgacagtcagtcattcattatttttagagtctttttaggatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 3874573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 31430638 - 31430529
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    |||||||||| |||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  31430638 tgatgacagttagtcatttgctatttttagagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 31430539  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  31430538 tttgaagaaa 31430529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 256
Target Start/End: Original strand, 5665830 - 5665905
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagca 256  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  5665830 tgatgacagtcaatcattcgctatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagca 5665905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 43722904 - 43722985
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  43722904 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa 43722985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 181 - 269
Target Start/End: Complemental strand, 13972813 - 13972725
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaa 269  Q
    |||||||||||| ||||||  ||||||||| ||||||||||||||||| ||||||||||| |||| |||||||||||||||| ||||||    
T  13972813 tgatgacagtcaatcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaa 13972725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 29439597 - 29439723
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||| |||||||  || |||||||||| |||| ||||| ||   ||||||||||||||| |||| ||||||  ||| ||||||||| ||||||    
T  29439597 tgatgacagtccgtcattcgttaattttagtgtcattttcatgatgtt---gagttcacaagcaagtttaaacagcaaagaaaacaagaaaaaaagaaga 29439693  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgatt 309  Q
    ||| ||||||||||||||||||||||||||    
T  29439694 tttcgaagaaagcaaaatcgtgtcacgatt 29439723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 5104953 - 5105032
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    ||||||||||||||||||||||  |||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  5104953 tgatgacagtcagtcattcact--ttttagagtttttttatgatatttttgagttcacaagcaagattaagcagcaagaaaa 5105032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 272
Target Start/End: Original strand, 13136764 - 13136853
Alignment:
Q  183 atgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||   ||||||||| ||| ||||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||    
T  13136764 atgacagtcagtcatttgttatttttagagtcattttatgatatttttgagttcacaaacaagattaagcagcaagaaaagcaagaaaaa 13136853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 184 - 290
Target Start/End: Complemental strand, 36985732 - 36985626
Alignment:
Q  184 tgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattt 282  Q
    ||||||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| ||  |||||||||||||||    
T  36985732 tgacagtcagtcattcgttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcagaaaaaatagaagattt 36985634  T
Q  283 tgaagaaa 290  Q
    ||||||||    
T  36985633 tgaagaaa 36985626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 45453051 - 45453160
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| ||||||||||  ||||||||| ||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  45453051 tgatgacaatcagtcattctttatttttagggtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 45453149  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  45453150 ttttgaagaaa 45453160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 181 - 262
Target Start/End: Original strand, 6825974 - 6826055
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    |||||||||||| ||||||  ||| ||||  ||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  6825974 tgatgacagtcaatcattcgttatatttaaagtctttttatgatatttttgagttcacaagcaagattaagcatcaagaaaa 6826055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 45456300 - 45456409
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||| |||| |||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||  ||| || |||||||| ||||    
T  45456300 tgatgacaatcagccattctttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaagaaagcatgaaaaatacaaga 45456398  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  45456399 ttttgaagaaa 45456409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 290
Target Start/End: Complemental strand, 31428414 - 31428340
Alignment:
Q  216 ttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    |||||||||| || |||||||||||||||| |||| || |||| ||| || |||||||| |||||||||||||||    
T  31428414 ttttatgataattttgagttcacaagcaagtttaaacaacaaggaaagcatgaaaaatacaagattttgaagaaa 31428340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 9189572 - 9189532
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  9189572 tgatgacagtcagtcattcgctatttttagagtctttttat 9189532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 37280596 - 37280556
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  37280596 tgatgacagtcagtcattcgctatttttagagtctttttat 37280556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 43208809 - 43208769
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  43208809 tgatgacagtcagtcattcgctatttttagagtctttttat 43208769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 31586823 - 31586785
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt 219  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  31586823 tgatgacagtcagtcattcgctatttttagagtcttttt 31586785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 1504318 - 1504290
Alignment:
Q  181 tgatgacagtcagtcattcactattttta 209  Q
    |||||||||||||||||||||||||||||    
T  1504318 tgatgacagtcagtcattcactattttta 1504290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 209
Target Start/End: Complemental strand, 1507520 - 1507492
Alignment:
Q  181 tgatgacagtcagtcattcactattttta 209  Q
    |||||||||||||||||||||||||||||    
T  1507520 tgatgacagtcagtcattcactattttta 1507492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 8887842 - 8887882
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  8887842 tgatgacagtccgtcattcgctatttttagagtctttttat 8887882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 25957363 - 25957323
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  25957363 tgatgacagtccgtcattcgctatttttagagtctttttat 25957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 40780658 - 40780698
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    |||||||||||| |||||| |||||||||| ||||||||||    
T  40780658 tgatgacagtcaatcattcgctatttttagagtctttttat 40780698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 29644308 - 29644151
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||| |||||||   |||| ||| ||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||||||||||||     
T  29644308 tgatgacagtctgtcattccacatttatagagtctttttatgatatttttgagttcacaagcaaacttaagcagcaaaaaaagcaagaaaaatagaagac 29644209  T
Q  281 tttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  29644208 tttgaagaaagtaaaatcgtgtcacgattgttgaaaacgtatcacgatttggagcaca 29644151  T

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Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 181 - 338
Target Start/End: Original strand, 2793299 - 2793456
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta-tgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||| |||| ||| ||  ||| ||||||||||||||||    
T  2793299 tgatgacagtcagtcgttcactatttttagagtctttttaatgatattt-tgagttcacaagcaagtttaaacagtaaagaaaacaagaaaaatagaaga 2793397  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2793398 tttcgaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttgaagcaca 2793456  T

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Target: chr1; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 1951345 - 1951190
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||||||||||||||| ||| || |||| ||||||| | |||||||||||||||| |||| ||||||  ||| ||||||||||||||||    
T  1951345 tgatgacagtcagtcattcactattttaagtatcattttcatgatatct-tgagttcacaagcaagtttaaacagcaaagaaaacaagaaaaatagaaga 1951247  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    |||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1951246 tttcaaagaaagcaaaatcgtgtcacgattgttgaaaacgtgtcacgatttggagca 1951190  T

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Target: chr1; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 49499568 - 49499413
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||||||| || ||||||||||  |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  49499568 tgatgacagtcagtcattcgctgtttttagtgttattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 49499470  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagca 336  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  49499469 ttttgaagaaagcaaaatcatgtcacgattgttgaaaacgtgtcacgatttggagca 49499413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 41059234 - 41059135
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| |||||    
T  41059234 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcgcaagcaagcttaagcagcaagaaaagcaagaaaaatcgaaga 41059135  T

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Target: chr1; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 2404722 - 2404809
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaaga 268  Q
    ||||||||||||||||||| |||||||||| |||||||||| |||||| |||||||||||||||| |||||||||||||||| |||||    
T  2404722 tgatgacagtcagtcattcgctatttttagagtctttttataatatttttgagttcacaagcaagattaagcagcaagaaaagcaaga 2404809  T

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Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 45961707 - 45961598
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||||||||||  |||||||||| ||||| |||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| |||||    
T  45961707 tgatgacagtcagtcatttgctatttttagagtcttgttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagat 45961608  T
Q  281 tttgaagaaa 290  Q
    ||||||||||    
T  45961607 tttgaagaaa 45961598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 290
Target Start/End: Complemental strand, 27537212 - 27537104
Alignment:
Q  182 gatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagatt 281  Q
    |||||||||||||||||  |||||||||  |||||||||||||| || ||||||||||||||||||||| || |||| ||| || |||||||| ||||||    
T  27537212 gatgacagtcagtcatttgctatttttatagtctttttatgataattttgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaagatt 27537113  T
Q  282 ttgaagaaa 290  Q
    |||||||||    
T  27537112 ttgaagaaa 27537104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 42021721 - 42021812
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||| |||||| |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||| |||| |||||||||    
T  42021721 tgatgacagtcaatcattcgctatttttagagtctttttataatattactgagttcacaagcaagtttaagcagcaataaaagcaagaaaaa 42021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 181 - 338
Target Start/End: Complemental strand, 34733262 - 34733106
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||| ||||||| || |||||||| |||   |||||||| ||| |||||||||||||||| |||| ||| ||| ||| || ||||| | |||||    
T  34733262 tgatgacagt-agtcattacattatttttattgtaaatttatgatcttt-tgagttcacaagcaagattaaacagtaaggaaatcatgaaaagttgaaga 34733165  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||||||| ||||||||| ||||||||| |||||| ||||| |||||||||||||    
T  34733164 ttttgaagaaagtaaaatcgtgacacgattgttgaaaacatgtcaggatttggagcaca 34733106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 181 - 262
Target Start/End: Complemental strand, 21019367 - 21019287
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaa 262  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||||| ||||||| ||| |||||||||||||||||||||    
T  21019367 tgatgacagtcagtcattcgctatttttagagtctttt-atgatatttttgagttcgcaaccaagcttaagcagcaagaaaa 21019287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 21108393 - 21108302
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| || ||||||| ||||| ||||||||||| |||  ||| ||||||| |||||| ||||||||| |||||||||    
T  21108393 tgatgacagtcagtcattcgctctttttagagtcttcttatgatatttttgaactcaaaagcaagattaagctgcaagaaaagcaagaaaaa 21108302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 31204014 - 31204123
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||||||||||||  ||||||||||||| |||| || || ||| ||||||||||||||||||||| || |||| ||| || |||||||| ||||    
T  31204014 tgatgatagtcagtcattctttatttttagtgtcattttcattatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatacaaga 31204112  T
Q  280 ttttgaagaaa 290  Q
    |||||||||||    
T  31204113 ttttgaagaaa 31204123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 6071851 - 6071791
Alignment:
Q  230 tgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    ||||||||||||||||||||| || |||||||| || |||||||| |||||||||||||||    
T  6071851 tgagttcacaagcaagcttaaacaacaagaaaaacatgaaaaatacaagattttgaagaaa 6071791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 47708817 - 47708778
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  47708817 tgatgacagtcagtcattcactatttttagagtcttttta 47708778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 218
Target Start/End: Complemental strand, 22460443 - 22460406
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt 218  Q
    |||||||||||||||||||||||||||||| |||||||    
T  22460443 tgatgacagtcagtcattcactatttttagagtctttt 22460406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 45940621 - 45940661
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  45940621 tgatgacagtcagtcattcgctatttttagagtctttttat 45940661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 3088735 - 3088696
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  3088735 tgatgacagtcagtcatgcactatttttagagtcttttta 3088696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Complemental strand, 22454319 - 22454290
Alignment:
Q  181 tgatgacagtcagtcattcactatttttag 210  Q
    ||||||||||||||||||||||||||||||    
T  22454319 tgatgacagtcagtcattcactatttttag 22454290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 49147113 - 49147150
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttt 218  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  49147113 tgatgacagtcaatcattcactatttttagagtctttt 49147150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 28110283 - 28110323
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  28110283 tgatgacagtccgtcattcgctatttttagagtctttttat 28110323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 37184783 - 37184743
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttat 221  Q
    ||||||||||| ||||||| |||||||||| ||||||||||    
T  37184783 tgatgacagtccgtcattcgctatttttagagtctttttat 37184743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 181 - 331
Target Start/End: Original strand, 61597 - 61747
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| ||||||||||||||||||||| || |||  ||| ||||| ||||||||||    
T  61597 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacaagcaagcttaaacaacaaagaaatcaagagaaatagaaga 61695  T
Q  280 ttttgaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 331  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  61696 ttttaaagaaagcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttg 61747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 246350 - 246232
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||| ||| |||||||   |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  246350 tgatgacggtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaatagaagat 246251  T
Q  281 tttgaagaaagcaaaatcg 299  Q
    |||||||||||||||||||    
T  246250 tttgaagaaagcaaaatcg 246232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 192 - 338
Target Start/End: Original strand, 290974 - 291120
Alignment:
Q  192 agtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaa 290  Q
    ||||||||||||||||||||||| |||| ||||||||| | |||||||||||||| |||| || |||  ||| |||||||||||||||||||||| ||||    
T  290974 agtcattcactatttttagtgtcattttcatgatattt-taagttcacaagcaagtttaaacaacaaagaaaacaagaaaaatagaagattttgaggaaa 291072  T
Q  291 gcaaaatcgtgtcacgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    ||||| | ||||||||||||| ||||||||||||||||||||||||||    
T  291073 gcaaatttgtgtcacgattgttgaaaacgtgtcacgatttggagcaca 291120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 197242 - 197358
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagat 280  Q
    ||||||||||| |||||||   |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  197242 tgatgacagtctgtcattccacatttttagagtctttttatgatatttttgagttcacaagcaagcataagcagcaagaaaagcaagaaaaatagaagat 197341  T
Q  281 tttgaagaaagcaaaat 297  Q
    ||||||||||| |||||    
T  197342 tttgaagaaagtaaaat 197358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 4563 - 4654
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4563 tgatgacagtcagtcattcactatttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaatcaagaaaaa 4654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 338
Target Start/End: Original strand, 26277 - 26402
Alignment:
Q  204 tttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaagattttgaagaaagcaaaatcgtgtc 303  Q
    ||||||| ||||||||||||||||| ||||||||||||||| | ||||||||| ||||         |||||||||||||||||||||||||||||||||    
T  26277 tttttagagtctttttatgatatttttgagttcacaagcaaacataagcagcatgaaa---------aatagaagattttgaagaaagcaaaatcgtgtc 26367  T
Q  304 acgattgtcgaaaacgtgtcacgatttggagcaca 338  Q
    |||||||| ||||||||||||||||||| ||||||    
T  26368 acgattgttgaaaacgtgtcacgatttgaagcaca 26402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 1060 - 969
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| ||| |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  1060 tgatgacagtcagtcattcgctacttttagagtatttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 969  T

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Target: scaffold0270; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 4420 - 4329
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||| ||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  4420 tgatgtcagtcagtcattcgctacttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 4329  T

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Target: scaffold0270; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 11550 - 11459
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||| ||||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  11550 tgatgtcagtcagtcattcgctacttttagagtctttttatgatatttttgagttcacaagcaagcttaagcagcaagaaaagcaagaaaaa 11459  T

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Target: scaffold0334 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 305
Target Start/End: Original strand, 18463 - 18588
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtc-tttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||||| |||||||||| || |||  ||| ||||||||||||||||    
T  18463 tgatgacagtcagtcattcactgtttttagtgtcattttcatgatattt-tgagttcacatgcaagcttaaacaacaaagaaaacaagaaaaatagaaga 18561  T
Q  280 -ttttgaagaaagcaaaatcgtgtcac 305  Q
     ||||||||||||||||| ||||||||    
T  18562 tttttgaagaaagcaaaaacgtgtcac 18588  T

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Target: scaffold0381 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 6554 - 6462
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    ||||||||||||||||||| |||||||||| |||||||| ||||||||| |||||||||| ||||||||||||| |||||||| |||||||||    
T  6554 tgatgacagtcagtcattcgctatttttagagtcttttttatgatatttttgagttcacaggcaagcttaagcaacaagaaaagcaagaaaaa 6462  T

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Target: scaffold0045 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 287
Target Start/End: Original strand, 88965 - 89071
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||||||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||| || |||||||||||||    
T  88965 tgatgacagtcagtcattcgttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaaagcatgaaaaatagaaga 89063  T
Q  280 ttttgaag 287  Q
    ||||||||    
T  89064 ttttgaag 89071  T

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Target: scaffold0520 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 4880 - 4790
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaa 271  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| ||||  |||||||    
T  4880 tgatgacagtcagtcattcgttatttttagagtctttttatgatatttttgagttcacaaacaagattaagcagcaaaaaaagaaagaaaa 4790  T

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Target: scaffold1993 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 1045 - 1136
Alignment:
Q  181 tgatgacagtcagtcatt-cactatttttagtgtctttttatgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaa 272  Q
    |||||||||||||||||| ||| |||||||| |||||||||||||||||  ||||||| ||| ||||||||||| |||||||| |||||||||    
T  1045 tgatgacagtcagtcatttcac-atttttagagtctttttatgatattttggagttcataaggaagcttaagcaccaagaaaagcaagaaaaa 1136  T

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Target: scaffold1684 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 474 - 369
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttt-atgatatttctgagttcacaagcaagcttaagcagcaagaaaaccaagaaaaatagaaga 279  Q
    |||||| ||||||||||||  ||||||||||||| |||| ||||| ||| ||||||||||||||||||||| || |||| ||  || |||||||| ||||    
T  474 tgatgaaagtcagtcattctttatttttagtgtcattttcatgatgttt-tgagttcacaagcaagcttaaacaacaaggaacgcatgaaaaatacaaga 376  T
Q  280 ttttgaa 286  Q
    |||||||    
T  375 ttttgaa 369  T

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Target: scaffold0567 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 7055 - 7016
Alignment:
Q  181 tgatgacagtcagtcattcactatttttagtgtcttttta 220  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  7055 tgatgacagtcagtcattcactatttttagagtcttttta 7016  T

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