View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4987_high_18 (Length: 305)

Name: NF4987_high_18
Description: NF4987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4987_high_18
NF4987_high_18
[»] chr8 (13 HSPs)
chr8 (2-299)||(45136479-45136777)
chr8 (2-272)||(23540900-23541171)
chr8 (1-299)||(27924945-27925243)
chr8 (2-272)||(22485528-22485799)
chr8 (3-288)||(33977437-33977724)
chr8 (54-211)||(22476635-22476793)
chr8 (4-288)||(33962118-33962397)
chr8 (124-299)||(13659988-13660163)
chr8 (124-299)||(13718631-13718806)
chr8 (3-213)||(26536740-26536951)
chr8 (71-260)||(25240768-25240955)
chr8 (181-266)||(24092359-24092443)
chr8 (82-230)||(20254450-20254598)
[»] chr1 (16 HSPs)
chr1 (3-299)||(20840758-20841055)
chr1 (3-272)||(4246432-4246701)
chr1 (3-241)||(20200582-20200820)
chr1 (3-266)||(24986383-24986648)
chr1 (3-272)||(13165789-13166059)
chr1 (2-297)||(26971889-26972189)
chr1 (3-204)||(11667397-11667600)
chr1 (81-289)||(17850949-17851156)
chr1 (84-290)||(1625954-1626156)
chr1 (179-288)||(23477607-23477715)
chr1 (179-290)||(12753438-12753549)
chr1 (71-214)||(10339721-10339864)
chr1 (179-265)||(25349874-25349959)
chr1 (206-290)||(15803809-15803892)
chr1 (26-119)||(23477453-23477546)
chr1 (165-230)||(51471744-51471809)
[»] chr6 (41 HSPs)
chr6 (2-272)||(19077538-19077809)
chr6 (2-299)||(20465387-20465686)
chr6 (3-299)||(17234963-17235259)
chr6 (6-298)||(19171785-19172077)
chr6 (2-272)||(13195720-13195990)
chr6 (1-299)||(8465159-8465463)
chr6 (2-299)||(12039201-12039500)
chr6 (2-299)||(19100268-19100563)
chr6 (25-299)||(25969710-25969982)
chr6 (25-299)||(25974150-25974422)
chr6 (3-272)||(33666188-33666456)
chr6 (3-259)||(13869896-13870152)
chr6 (3-299)||(23879255-23879550)
chr6 (1-299)||(17527376-17527676)
chr6 (3-191)||(20989284-20989473)
chr6 (3-272)||(19894164-19894432)
chr6 (2-272)||(21722900-21723169)
chr6 (2-272)||(9281203-9281471)
chr6 (2-272)||(17855593-17855861)
chr6 (2-193)||(12028636-12028828)
chr6 (2-176)||(20653559-20653735)
chr6 (140-272)||(14259311-14259443)
chr6 (26-290)||(23882216-23882479)
chr6 (6-194)||(25805880-25806070)
chr6 (3-160)||(21706024-21706182)
chr6 (3-147)||(17876248-17876393)
chr6 (3-288)||(29253176-29253461)
chr6 (3-120)||(17863968-17864086)
chr6 (71-265)||(15930411-15930603)
chr6 (169-288)||(17864087-17864206)
chr6 (71-146)||(28623142-28623217)
chr6 (221-299)||(20989477-20989555)
chr6 (71-214)||(26965137-26965280)
chr6 (179-268)||(21322949-21323037)
chr6 (209-299)||(25965063-25965151)
chr6 (179-283)||(24542037-24542141)
chr6 (63-230)||(24564152-24564319)
chr6 (179-230)||(17869587-17869638)
chr6 (179-230)||(17879339-17879390)
chr6 (79-209)||(19658373-19658503)
chr6 (239-298)||(25805823-25805882)
[»] chr5 (18 HSPs)
chr5 (2-299)||(23757750-23758048)
chr5 (2-299)||(23823206-23823504)
chr5 (3-299)||(23420051-23420347)
chr5 (2-299)||(9422009-9422305)
chr5 (2-260)||(24190268-24190529)
chr5 (2-272)||(22251534-22251803)
chr5 (1-259)||(22404253-22404513)
chr5 (3-265)||(26037181-26037443)
chr5 (3-288)||(38405740-38406026)
chr5 (5-259)||(22245855-22246109)
chr5 (3-280)||(22082185-22082461)
chr5 (7-299)||(25104958-25105234)
chr5 (7-299)||(25164051-25164327)
chr5 (3-264)||(30605185-30605448)
chr5 (26-288)||(26328733-26328994)
chr5 (26-288)||(18221489-18221750)
chr5 (26-251)||(23624291-23624512)
chr5 (71-290)||(20714305-20714521)
[»] chr3 (25 HSPs)
chr3 (2-299)||(19634248-19634546)
chr3 (1-299)||(18548017-18548315)
chr3 (13-272)||(44452879-44453137)
chr3 (6-299)||(18063704-18063999)
chr3 (3-299)||(13791047-13791342)
chr3 (3-272)||(18482867-18483136)
chr3 (2-272)||(24195919-24196191)
chr3 (7-259)||(7028569-7028824)
chr3 (2-272)||(23954051-23954322)
chr3 (2-299)||(17135638-17135934)
chr3 (25-299)||(1918761-1919034)
chr3 (3-155)||(13515113-13515266)
chr3 (178-299)||(13515266-13515387)
chr3 (165-299)||(18034554-18034688)
chr3 (4-160)||(295949-296105)
chr3 (2-199)||(15572496-15572687)
chr3 (26-268)||(21253515-21253756)
chr3 (27-125)||(28051680-28051778)
chr3 (195-299)||(15635559-15635662)
chr3 (201-299)||(17702775-17702872)
chr3 (179-290)||(6579219-6579330)
chr3 (180-283)||(17042425-17042528)
chr3 (99-290)||(286488-286677)
chr3 (79-214)||(979948-980083)
chr3 (234-288)||(295831-295885)
[»] chr7 (31 HSPs)
chr7 (7-298)||(16207379-16207671)
chr7 (1-299)||(20991910-20992210)
chr7 (2-266)||(4459140-4459405)
chr7 (2-299)||(12326179-12326478)
chr7 (25-299)||(11999251-11999523)
chr7 (27-299)||(11588832-11589105)
chr7 (4-259)||(14165574-14165829)
chr7 (3-283)||(29545635-29545912)
chr7 (3-299)||(11520906-11521202)
chr7 (4-299)||(645503-645800)
chr7 (5-295)||(15438469-15438739)
chr7 (110-299)||(15506636-15506822)
chr7 (26-288)||(16437154-16437416)
chr7 (71-290)||(14927025-14927244)
chr7 (71-290)||(15350491-15350710)
chr7 (3-69)||(15506828-15506895)
chr7 (71-230)||(21260868-21261027)
chr7 (181-290)||(26132600-26132706)
chr7 (71-239)||(6045746-6045916)
chr7 (71-214)||(23082338-23082481)
chr7 (84-265)||(20924683-20924862)
chr7 (179-290)||(10661240-10661351)
chr7 (71-265)||(23960431-23960622)
chr7 (179-290)||(42636596-42636707)
chr7 (71-265)||(7586094-7586286)
chr7 (181-288)||(10280190-10280296)
chr7 (26-121)||(10280400-10280495)
chr7 (185-265)||(10038407-10038485)
chr7 (71-265)||(24902508-24902699)
chr7 (71-116)||(4547380-4547425)
chr7 (11-50)||(16222075-16222115)
[»] scaffold0226 (3 HSPs)
scaffold0226 (5-299)||(7034-7330)
scaffold0226 (5-299)||(17621-17917)
scaffold0226 (5-299)||(27015-27311)
[»] scaffold0190 (1 HSPs)
scaffold0190 (7-299)||(16119-16412)
[»] scaffold0213 (1 HSPs)
scaffold0213 (2-299)||(8072-8372)
[»] scaffold0103 (1 HSPs)
scaffold0103 (2-299)||(25171-25469)
[»] chr4 (20 HSPs)
chr4 (2-299)||(15161977-15162276)
chr4 (13-299)||(10724629-10724910)
chr4 (13-299)||(10938398-10938679)
chr4 (3-259)||(16384298-16384555)
chr4 (2-299)||(18601153-18601449)
chr4 (2-272)||(33898502-33898771)
chr4 (2-299)||(23399689-23399986)
chr4 (8-272)||(28019699-28019963)
chr4 (5-272)||(25117252-25117519)
chr4 (28-288)||(15699856-15700115)
chr4 (179-290)||(19183355-19183465)
chr4 (82-264)||(32862050-32862230)
chr4 (173-299)||(10191255-10191379)
chr4 (179-290)||(15622815-15622924)
chr4 (192-283)||(19659823-19659913)
chr4 (179-273)||(33746312-33746406)
chr4 (72-214)||(41785887-41786029)
chr4 (181-290)||(9069322-9069431)
chr4 (179-230)||(15687382-15687433)
chr4 (71-119)||(19659983-19660031)
[»] scaffold0185 (1 HSPs)
scaffold0185 (2-299)||(1861-2158)
[»] chr2 (9 HSPs)
chr2 (2-299)||(12910861-12911158)
chr2 (2-299)||(24789652-24789950)
chr2 (5-272)||(22611287-22611554)
chr2 (7-299)||(23758993-23759285)
chr2 (74-268)||(15328721-15328918)
chr2 (181-283)||(21530766-21530867)
chr2 (179-268)||(19445000-19445088)
chr2 (84-214)||(21249773-21249903)
chr2 (208-264)||(19466225-19466280)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-299)||(36960-37256)
[»] scaffold0037 (1 HSPs)
scaffold0037 (3-298)||(109753-110049)
[»] scaffold0069 (2 HSPs)
scaffold0069 (46-266)||(6308-6528)
scaffold0069 (2-52)||(9289-9340)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-255)||(159484-159738)
[»] scaffold0259 (2 HSPs)
scaffold0259 (4-176)||(16821-16994)
scaffold0259 (222-299)||(16992-17069)
[»] scaffold0059 (1 HSPs)
scaffold0059 (25-227)||(47909-48113)
[»] scaffold0004 (1 HSPs)
scaffold0004 (54-259)||(356841-357046)
[»] scaffold0359 (2 HSPs)
scaffold0359 (2-142)||(2414-2556)
scaffold0359 (187-259)||(2327-2398)
[»] scaffold0003 (1 HSPs)
scaffold0003 (26-288)||(26784-27046)
[»] scaffold0020 (1 HSPs)
scaffold0020 (179-299)||(12183-12301)
[»] scaffold0480 (1 HSPs)
scaffold0480 (71-116)||(11732-11777)
[»] scaffold0129 (1 HSPs)
scaffold0129 (5-63)||(16109-16168)


Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 45136777 - 45136479
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45136777 ctgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 45136678  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||| ||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  45136677 tgtttatgattcttgttttgcagattagctgaactgatttgctttgtgctgaagcccaactaagtatttatctcaagctgcttgagtatataaggaagac 45136578  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  45136577 ttcaagacctaattgattattcaagccgtcatactaaaaagtatagatttttagggttttgagtctttatgagctctattcttgtatcgtttgtgatgc 45136479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 23540900 - 23541171
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  23540900 ctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttctgacatttttggactttccatatt 23540999  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  23541000 tgtttctgattcttgttttgcagattagttgaaccgatctgctttgtgctgaaacccaactaagtatttagcccaagctgcttcaatatataaggaagac 23541099  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    | ||| |||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23541100 tccaatacctaattaatcattcaagtcgtcatactaaaaagtttagatttttagggttttgagtctttatgt 23541171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 27924945 - 27925243
Alignment:
Q  1 actgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatat 99  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  27924945 actgtggaatatttctaaagtagattttatattttatgaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggactttccatat 27925044  T
Q  100 ttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| |||    
T  27925045 ttgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgttgaag-ccaactaagtatttagcccaagctgcttcagtatataagggaga 27925143  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||||||||||||||| | | |||||||||| ||||||||||||| ||||||||||  ||||| ||||||||| |||| | ||||||||    
T  27925144 cttcaagacctaattgatcattcaagctggcatactaaaaaggttagatttttaggattttgagtctacatgtgttctattcttttatcatttgtgatgc 27925243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 22485799 - 22485528
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||| |||    
T  22485799 ctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttagaacgatcctataaatgttccgacattttaggactttccagatt 22485700  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||||||||||||||||||||| | ||||| |||||||| || | |||||||||||  || | ||||||||||  |||||||||||||||||||||    
T  22485699 tgtttctgattcttgttttgcagattaagctgaatcgatctgcattttactgaagcccaatgaaatctttagcccaagttgcttcagtatataaggaaga 22485600  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||    
T  22485599 cttcaagacctaattgttcattcaagccgtcatactaaaaagtttagattttttggg-tttgagtcttcatgt 22485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 3 - 288
Target Start/End: Complemental strand, 33977724 - 33977437
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| ||||||||| |||||| |||||||||| ||||||||||| || | ||||||||| | ||||||||||||||||||||||| |||||||    
T  33977724 tgtggaatattcctaaagtagtatttattttttaggaaaaatttgttattgatttggacgatcctagagatgttccgacattttaggactttacatattt 33977625  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagt---atataaggaa 197  Q
    || |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||  ||| | |||||| |||   |||||||  |    
T  33977624 gtctctgattc-tgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagctgctt-agtataatataagtga 33977527  T
Q  198 gacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    ||||||||||||||||  |  |||||||||||| | || ||||||||||||||||| ||||||||||||  |||||||||| |||| ||||    
T  33977526 gacttcaagacctaatcaactattcaagccgtcattct-aaaagtttagatttttaaggttttgagtctacatgtgctctactcttgtatc 33977437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 54 - 211
Target Start/End: Complemental strand, 22476793 - 22476635
Alignment:
Q  54 ttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctga 152  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||| ||   ||||    
T  22476793 ttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctgattcttgttttgcagattaagctgaaccgatctgcatttaactga 22476694  T
Q  153 agcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagaccta 211  Q
    |||||||  || |||||||||||| ||||||||||||||||||||||||| ||||||||    
T  22476693 agcccaatgaaatatttagcccaagctgcttcagtatataaggaagacttgaagaccta 22476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 4 - 288
Target Start/End: Complemental strand, 33962397 - 33962118
Alignment:
Q  4 gtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    |||||||||| ||||||||| |||||| |||||||||| ||||||||||| || | |||||||||         ||||||||||||||||| ||||||||    
T  33962397 gtggaatattcctaaagtagtatttattttttaggaaaaatttgttattgatttggacgatcctag--------cgacattttaggactttacatatttg 33962306  T
Q  103 tttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagt---atataaggaag 198  Q
    | ||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||  ||| | ||||||||||   |||||||  ||    
T  33962305 tctctgattct-gttttgcagattagctgaaccgatctgctttgttctgaagcccaactaaagtatttgacccgagctgcttcagtataatataagtgag 33962207  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    |||||||||||||||  |  |||||||||||| | || ||||||||||||||||| | ||||||||||  |||||||||| |||| ||||    
T  33962206 acttcaagacctaatgaactattcaagccgtcattct-aaaagtttagatttttaagattttgagtctacatgtgctctactcttgtatc 33962118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 299
Target Start/End: Original strand, 13659988 - 13660163
Alignment:
Q  124 attacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattc 222  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| | | ||||||||||||||||||||||||    
T  13659988 attagctgaaccgatctgctttgtgctgaagcccaattaatgtatttagcccaagctgcttcagtatataaaggaaacttcaagacctaattgatcattc 13660087  T
Q  223 aagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||| |||  ||||||||| |||| | |||||| |||||||||||  ||||||||||||||| |||||| ||||||||    
T  13660088 aagtcgttatactaaaaaattta-aattttagagttttgagtctacatgtgctctattcttgtatcgtttgtgatgc 13660163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 124 - 299
Target Start/End: Original strand, 13718631 - 13718806
Alignment:
Q  124 attacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattc 222  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||| | | ||||||||||||||||||||||||    
T  13718631 attagctgaaccgatctgctttgtgctgaagcccaattaatgtatttagcccaagctgcttcagtatataaaggaaacttcaagacctaattgatcattc 13718730  T
Q  223 aagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||| |||  ||||||||| |||| | |||||| |||||||||||  ||||||||||||||| |||||| ||||||||    
T  13718731 aagtcgttatactaaaaaattta-aattttagagttttgagtctacatgtgctctattcttgtatcgtttgtgatgc 13718806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 213
Target Start/End: Complemental strand, 26536951 - 26536740
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||| |||||| ||||||||| |||||||||||| |||||||||||||||| || | ||||| ||| | |||||||||||||||||||| ||||||||||    
T  26536951 tgtgaaatattcctaaagtagtatttatattttatgaaatatttgttattgttttggacgatactaaagatgttccgacattttaggac-ttccatattt 26536853  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagccc-aact-aagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||   |||||| | |||||||||||| |||||||||| |||||||| || |||||| |||| ||||||||  ||| | || |||||| |||||||  |||    
T  26536852 gtcgttgattc-tattttgcagattagctgaaccgatatgctttgttctaaagcccaaactaaagtatttgacccgagctacttcagcatataagtgaga 26536754  T
Q  200 cttcaagacctaat 213  Q
    ||||||||||||||    
T  26536753 cttcaagacctaat 26536740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 71 - 260
Target Start/End: Complemental strand, 25240955 - 25240768
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtat-tt 169  Q
    ||||||| || | ||| |||||||| |||||||| ||||||| ||||||| |||| | ||| || ||||| |||||| || |||||||| ||||  | ||    
T  25240955 atgttcctacttcttatgactttccttatttgttactgattcatgttttgtagatcagctggac-gatctactttgttctaaagcccaa-taagattatt 25240858  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggtttt 260  Q
    ||| ||   |||||||||||| |||||||||||||||||||||||    |||||||||||| |||||||||||||||  ||||||||||||    
T  25240857 agcacatattgcttcagtatagaaggaagacttcaagacctaattaggtattcaagccgtcatactaaaaagtttag-cttttagggtttt 25240768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 266
Target Start/End: Complemental strand, 24092443 - 24092359
Alignment:
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtct 266  Q
    ||||||||||||||| ||||||||| ||||||||||  |||||||||||| | |||||||||||||| |||||||| |||||||||    
T  24092443 cttcagtatataagggagacttcaacacctaattgagtattcaagccgtcattctaaaaagtttaga-ttttaggggtttgagtct 24092359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 230
Target Start/End: Original strand, 20254450 - 20254598
Alignment:
Q  82 ttttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-atttagcccaatctg 180  Q
    |||||||||||||||||||||||  |||||||||||  | |||| | || ||| ||||| | |||| |||||||||||| | || ||| |||| |   |     
T  20254450 ttttaggactttccatatttgttattgattcttgttacgtagatcagctaaac-gatctacattgttctgaagcccaacaaggttattgagcctatattc 20254548  T
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  20254549 cttcagtatataagaaagacttcaagacctaattattcattcaagccgtc 20254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-127; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 3 - 299
Target Start/End: Original strand, 20840758 - 20841055
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20840758 tgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 20840857  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||||||||||||||| || ||||| |||||||| || |||    
T  20840858 gtttctgattcttgttttgtagattagctgaactgatctgctttgtactgaagcccaactaagtatttagcccaagcttcttcaatatataagaaatact 20840957  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||    
T  20840958 tcaagacctaattgatcatttaagccgtcatactaaaaagtttagatttttagtgttttgagtctttatgtgctatattcttgtatcgtttgtgatgc 20841055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 3 - 272
Target Start/End: Complemental strand, 4246701 - 4246432
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  4246701 tgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatcttatgaatgttccgacattttaggactttcaatattt 4246602  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||    
T  4246601 gtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaactaattatttagcccaagctgcttcagtatataaagaagact 4246502  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||| |||||||||||| | ||||||||||||||||||||||||| |||||||||| ||||    
T  4246501 tcaagacctaattgttcattcaagccgccatactaaaaagtttagatttttaggg-tttgagtcttcatgt 4246432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 3 - 241
Target Start/End: Original strand, 20200582 - 20200820
Alignment:
Q  3 tgtggaatatttctaaagtagatttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | |||||    
T  20200582 tgtggaatatttctaaagtagatttatattttaggaaatatttgttattggttggaacgatcctataaatgttccaatattttaggactttctaaatttg 20200681  T
Q  103 tttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    | | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||| ||||||||    
T  20200682 tatatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcctaactaagtatttagcctaagctgcttcagtatataacgaagactt 20200781  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaag 241  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  20200782 caagacataattgatcattcaagccgtcatactaaaaag 20200820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 3 - 266
Target Start/End: Complemental strand, 24986648 - 24986383
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| ||| || |||||||| || | |||||||||||||||||||||||||||||||    
T  24986648 tgtggaatatttctaaagtaatatttatattttaggaaatatttgtttttgttttgaacgatcataaagatgttccgacattttaggactttccatattt 24986549  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||  ||||||| |||||| |||||||||| |||||| | ||||||| ||||||| ||||||||||||| |||||||||||||||||| ||||    
T  24986548 gtttctgatttctgttttgtagattagctgaaccgatttgcttttttctgaagcgcaactaaagtatttagcccaagctgcttcagtatataagggagac 24986449  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtct 266  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  24986448 ttcaagacctaatagatcattcaagccgtcattctaaaaagtttagatttttagggttttgagtct 24986383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 3 - 272
Target Start/End: Complemental strand, 13166059 - 13165789
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||| ||||||||||||||||||| |||||||  |||||||||||||| ||||    
T  13166059 tgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaatcttccgactctttaggactttccagattt 13165960  T
Q  102 gtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||| |||||||||||||||||||  |||||||||||||| || | |||||||||||  || ||||||||||||  ||||||||||||||||||||||    
T  13165959 gtttctaattcttgttttgcagattaagctgaaccgatctgcattttactgaagcccaatgaattatttagcccaagttgcttcagtatataaggaagac 13165860  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||| |||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||    
T  13165859 ttcaagacataattgttcattcaagtcgtcatactaaaaagtttagatttttaggg-tttgagtcttcatgt 13165789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 297
Target Start/End: Original strand, 26971889 - 26972189
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||| |||||||||||||||  |||| ||||||||| ||||||||  ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||    
T  26971889 ctgttgaatatttctaaagtgtattttatattttagaaaatatttaatattgtttggaaccatcctataaatgttccgacattttagaactttccatatt 26971988  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtat---ataagg 195  Q
    ||||| |||||||||||||||||||| | |||||||||||||| ||| | || ||||||||| || |||||||||||| ||||||||||||   ||||||    
T  26971989 tgtttatgattcttgttttgcagattaagctgaaccgatctgcattgttactaaagcccaacaaattatttagcccaagctgcttcagtatataataagg 26972088  T
Q  196 aagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtg 295  Q
    |||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||    
T  26972089 aagacttcaagacctaattgttgattcaagccgtcatactaaatagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtg 26972187  T
Q  296 at 297  Q
    ||    
T  26972188 at 26972189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 11667397 - 11667600
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| | ||||| | ||||||||||| |||||||||||    
T  11667397 tgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttacaacattttaggattttccatattt 11667496  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||| ||||||||||||||| ||| |||||| ||||||||||||  |||||||||||| |||||||| | |||| |||||||||||||||||| | ||    
T  11667497 gtttctaattcttgttttgcaggttagctgaactgatctgctttgttttgaagcccaactaaagtatttggtccaagctgcttcagtatataagggatac 11667596  T
Q  201 ttca 204  Q
    ||||    
T  11667597 ttca 11667600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 81 - 289
Target Start/End: Original strand, 17850949 - 17851156
Alignment:
Q  81 attttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtat-ttagcccaatct 179  Q
    ||||||||||||||||| ||| | ||||||||||||||||||||||| ||| || ||| |||||||| |||||||||||| | || | ||||||||   |    
T  17850949 attttaggactttccatttttatctctgattcttgttttgcagattagctggac-gatttgctttgttctgaagcccaacaaggtttattagcccatatt 17851047  T
Q  180 gcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctat 279  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||| ||| ||||||||||||||||||||| |||| ||||     
T  17851048 tcttcagtatataaggaagacttcaagacctaattgattattcaagccgtcattctaaaaagtgtag-tttttagggttttgagtctttgtgtgttctac 17851146  T
Q  280 tcttatatcg 289  Q
    |||| |||||    
T  17851147 tcttgtatcg 17851156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 290
Target Start/End: Complemental strand, 1626156 - 1625954
Alignment:
Q  84 ttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-atttagcccaatctgct 182  Q
    |||||||||||| | |||||| ||||||| ||||||| |||| |  || || ||||| ||||||  ||||||||||| | || ||||||||||   ||||    
T  1626156 ttaggactttccttgtttgtt-ctgattcgtgttttgtagatcagatggac-gatctactttgttatgaagcccaacaaggttatttagcccatattgct 1626059  T
Q  183 tcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattct 282  Q
    |||||||| |||||| ||||||||||||||||||| |||||||||||| |    |||||| |||  |||||||||||||||||||| |||| |||| |||    
T  1626058 tcagtataaaaggaaaacttcaagacctaattgattattcaagccgtcatttctaaaagtctag--ttttagggttttgagtctttgtgtg-tctactct 1625962  T
Q  283 tatatcgt 290  Q
    | ||||||    
T  1625961 tgtatcgt 1625954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 23477607 - 23477715
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctcta 278  Q
    |||||||||||| ||||||| | ||||||||||||  || |||||||||||| | ||||||||||||   ||||||||||||||||||| ||||| ||||    
T  23477607 tgcttcagtataaaaggaagccatcaagacctaatgtattattcaagccgtcattctaaaaagttta-tcttttagggttttgagtcttcatgtgttcta 23477705  T
Q  279 ttcttatatc 288  Q
    ||||| ||||    
T  23477706 ttcttgtatc 23477715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 12753549 - 12753438
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtact-aaaaagtttagatttttagggttttgagtctttatgtgctct 277  Q
    ||||||||||||||   |||||||||||||||||||  ||||||||||||||  ||| ||||||||||| ||||||||||||| ||||||| |||| |||    
T  12753549 tgcttcagtatatattcaagacttcaagacctaattattcattcaagccgtcaaactaaaaaagtttag-tttttagggtttttagtctttgtgtgttct 12753451  T
Q  278 attcttatatcgt 290  Q
    | |||| ||||||    
T  12753450 actcttgtatcgt 12753438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 10339721 - 10339864
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaag-tattt 169  Q
    ||||||| |||| || ||||||||| | |||||| ||||||| |||| || |||| | |||||| ||||||| ||||||||||||||| | | | ||||     
T  10339721 atgttcctacatatttggactttccttttttgttactgattcgtgttatgtagatcagctgaac-gatctgcattgtgctgaagcccagcaaggttattg 10339819  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaatt 214  Q
    |||| |   ||||||||||||||||||| | ||||||||||||||    
T  10339820 agcctatattgcttcagtatataaggaaaatttcaagacctaatt 10339864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 25349874 - 25349959
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    |||||||||||| ||||||||||||||||||||||     ||||||||| || | |||||||| |||| ||||||||||||||||||    
T  25349874 tgcttcagtataaaaggaagacttcaagacctaatcaggtattcaagccatcattctaaaaagattag-tttttagggttttgagtc 25349959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 290
Target Start/End: Original strand, 15803809 - 15803892
Alignment:
Q  206 gacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgt 290  Q
    |||||||||||| |||||||||||| | ||||||||| |||| ||||||| |||||||| ||| |||| |||| |||| ||||||    
T  15803809 gacctaattgattattcaagccgtcattctaaaaagtctaga-ttttaggattttgagtatttgtgtgttctactcttgtatcgt 15803892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 23477453 - 23477546
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgtttt 119  Q
    |||||||||||||||||||||   ||| || | ||| ||||| | ||||| | ||||| ||||||||||||||||||| | |||||| ||||||    
T  23477453 ttatattttaggaaatatttgaagttgatttggacgttcctaaagatgtttctacattgtaggactttccatatttgtctatgattcctgtttt 23477546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 230
Target Start/End: Original strand, 51471744 - 51471809
Alignment:
Q  165 tatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    |||||||||||   || |||||||||||  || |||||||||||||||||  ||||||||||||||    
T  51471744 tatttagcccatgttgattcagtatatattgaggacttcaagacctaattattcattcaagccgtc 51471809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 19077809 - 19077538
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  19077809 ctgtggaatatttctaaagtagattttatattttaggaaatatttattattggttggaacgatactataaatgttccgacattttaggactttccctatt 19077710  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  19077709 tgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaactaagtatctagcccaagctgcttcagtatataaggaagac 19077610  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  19077609 ttcaagacctaattgttcattcaagccgtaatactaaaaagtttagatttttagggttttgagtctttatgt 19077538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 20465387 - 20465686
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  20465387 ctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggactttccatatt 20465486  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| ||||||||||||||| ||||| |||||||||||| |||    
T  20465487 tgtttatgattcttgttttgcagattagctgaactgatctgctttgtgttgaagcccaactaaagtatttagcccaagctgctacagtatataagggaga 20465586  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||| | |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| | ||||||||    
T  20465587 cttcaagaacaaattgatcattcaagttgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctattcttttatcttttgtgatgc 20465686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 17235259 - 17234963
Alignment:
Q  3 tgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  17235259 tgtggaatatttctaaattagatattatattttaggaaatatttattattgtttggaatgatcctataaatgttccgacattttaggactttccagattt 17235160  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||  ||||| ||||||||| |||||||    
T  17235159 gtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaacaaattatttagcccaagttgctttagtatataaagaagact 17235060  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||||  |||  |||| |||||| ||||||||    
T  17235059 tcaagacctaattgttcattcaagccgtcatactaaaaagtttagatctttagggtttt-agtcttcatgtattctgctcttgtatcgtttgtgatgc 17234963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 6 - 298
Target Start/End: Complemental strand, 19172077 - 19171785
Alignment:
Q  6 ggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtt 104  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||| |  ||| ||    
T  19172077 ggaacatttctaaagtagattttatattttaggaaatatttattattggttggaacgatcctataaatgttccgaatttttaggactttcgagtttt-tt 19171979  T
Q  105 tctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttca 204  Q
    |||||||| ||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||    
T  19171978 tctgattcatgttttgtagattagctgaaccaatctgctttgtgctgaagcccaactaagtatttagcccaagccgcttcagtatataaggaagactcca 19171879  T
Q  205 agacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||  |||| |||||| |||||||    
T  19171878 agacctaattgatcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtattctgctcttgtatcgtttgtgatg 19171785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 13195990 - 13195720
Alignment:
Q  2 ctgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||| || |||    
T  13195990 ctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctataaatatgccgacattttaggacttttcagatt 13195891  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  13195890 tgtttctgattcttgttttgcagattagcagaaccgatctgctttgtgctgaagcccaactaagtatttagcccaagctgcttcagtatataaagaagac 13195791  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |  |||||||||||| | |||||||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  13195790 tgtaagacctaattgtttattcaagccgttatactaaaaagtttagatttttaggg-tttgagtcttcatgt 13195720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 8465159 - 8465463
Alignment:
Q  1 actgtggaatatttctaaagtag-atttatatt---ttaggaaatatttgttattggttgg-aacgatcctataaatgttccgacattttaggactttcc 95  Q
    ||||||||||| ||||||||||| |||||||||   ||||||| ||||||||||| ||||| |||||||||| | |||||| ||||||||||||||||||    
T  8465159 actgtggaatacttctaaagtagtatttatattattttaggaactatttgttatttgttgggaacgatcctaaagatgttctgacattttaggactttcc 8465258  T
Q  96 atatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataag 194  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||| | ||||||||||| |||||||||||||||||    
T  8465259 atatttgtttctgattcttgttttgcagattagctgaaccgatatgctttgtactgaagcccaactaatgaatttagcccaagctgcttcagtatataag 8465358  T
Q  195 gaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgt 294  Q
    | ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||  |||||||||| |||| |||||| | |    
T  8465359 ggagacttcaagacctaattgatcattcaagccgtcacactaaaaagtttagatttttaaggttttgagtctacatgtgctctactcttgtatcgtttat 8465458  T
Q  295 gatgc 299  Q
    |||||    
T  8465459 gatgc 8465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 12039201 - 12039500
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| || | ||||||||| | ||||||||||||||||||||||||||||||    
T  12039201 ctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatatt 12039300  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||| |||||||| ||||||| |||| |||||| ||||||||||||| ||||||  |||||| |||||||| |||| |||||| ||||||||||| |||    
T  12039301 tgtttatgattcttattttgcatattagctgaactgatctgctttgtgttgaagcataactaatgtatttagtccaagctgctttagtatataagggaga 12039400  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  12039401 cttcaagacctaattggtcattaaagtcgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 12039500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 19100563 - 19100268
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19100563 ctgtggaatatttccaaagtagattttatattttaggaaatatttattattggttggaacgatcctataaatgttccgacattttaggactttccagatt 19100464  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  ||||||||||||    
T  19100463 tgtttatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccaacttagtatttagcccaagctgcttcag--tataaggaagac 19100366  T
Q  201 ttcaagacctaa-ttgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||| ||  | |||||||||||| || ||| ||||||||| |||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  19100365 ttcaagacctaatttttttattcaagccgtcatagtaacaagtttaga-ttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 19100268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 299
Target Start/End: Complemental strand, 25969982 - 25969710
Alignment:
Q  25 tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcaga 124  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||  ||||| |||| ||| |||||||||||||||||     
T  25969982 tttatattttagtaaatatttattattgtttggaacgatcctataaatgttccgacactttaggaacttccagatttatttttgattcttgttttgcagc 25969883  T
Q  125 ttacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    ||| ||||||||||||||  |||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  25969882 ttagctgaaccgatctgcaatgtgctgaagcccaacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaa 25969783  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||  |||| |||||| ||||||||    
T  25969782 gccgtcatactaaaaag-ttagatttttaggg-tttgagtcttcatgtgttctgctcttgtatcgtttgtgatgc 25969710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 25 - 299
Target Start/End: Complemental strand, 25974422 - 25974150
Alignment:
Q  25 tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcaga 124  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||| |||||||  ||||| |||| ||| |||||||||||||||||     
T  25974422 tttatattttagtaaatatttattattgtttggaacgatcctataaatgttccgacactttaggaacttccagatttatttttgattcttgttttgcagc 25974323  T
Q  125 ttacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    ||| ||||||||||||||  |||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  25974322 ttagctgaaccgatctgcaatgtgctgaagcccaacgaattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaa 25974223  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||  |||| |||||| ||||||||    
T  25974222 gccgtcatactaaaaag-ttagatttttaggg-tttgagtcttcatgtgttctgctcttgtatcgtttgtgatgc 25974150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 3 - 272
Target Start/End: Complemental strand, 33666456 - 33666188
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  33666456 tgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataa-tgttccgacattttaggactttccagattt 33666358  T
Q  102 gtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||||||| |||||||||||||||  |||||||||||||| || |||||||||||||| || |||||||||||| |||||||||||||||||||||||    
T  33666357 gtttctgattattgttttgcagattaagctgaaccgatctgcattttgctgaagcccaacaaattatttagcccaagctgcttcagtatataaggaagac 33666258  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||| | ||||||||| || | || |||||||||||||||||||| |||||||||| ||||    
T  33666257 ttcaagacctaattgtttattcaagccatcattct-aaaagtttagatttttaggg-tttgagtcttcatgt 33666188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 3 - 259
Target Start/End: Original strand, 13869896 - 13870152
Alignment:
Q  3 tgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||||| | ||||    
T  13869896 tgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttagaacgatcctataaatgttccgacattttaggactttcaagattt 13869995  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||||||||   || |||||||||||||||||||||    
T  13869996 gtttctgattcttgttttgcagattagctgaaccgatgtgctttgtgctgaagcccaacaaattatttagcccgtgctacttcagtatataaggaagact 13870095  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    |||||||| | ||  |||||||||| ||| | || | |||||||||||||||||||||    
T  13870096 tcaagacccagttattcattcaagctgtcattct-acaagtttagatttttagggttt 13870152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 23879550 - 23879255
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| ||||||| ||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23879550 tgtggaatatttctaaagtgtattttatattttgggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagattt 23879451  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||||| | |||||||||||||| || || ||||||||||| || |||||||||||| ||||||||| |||||||||||||    
T  23879450 gtttctgattcttgttttgcagattaagctgaaccgatctgcattttgttgaagcccaacgaattatttagcccaagctgcttcagcatataaggaagac 23879351  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||| || |||||||||||||| | || |||||||||||||||| ||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  23879350 ttcaagacctaa-tgttcattcaagccgtcattct-aaaagtttagatttttcggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 23879255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 17527376 - 17527676
Alignment:
Q  1 actgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatat 99  Q
    |||||| ||||||||||||||  |||| |||||||| |||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||| | ||    
T  17527376 actgtgaaatatttctaaagtgtattttatattttaagaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttctagat 17527475  T
Q  100 ttgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaa 197  Q
    || |||||||||||||||| ||||||||  || ||||||| ||| || |  |||||||||||| || |||||||||||| ||||||||||||||||||||    
T  17527476 ttctttctgattcttgtttagcagattaagctaaaccgatatgcattcttactgaagcccaacaaattatttagcccaagctgcttcagtatataaggaa 17527575  T
Q  198 gacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgat 297  Q
    ||||| |||||||||||| |||||||||||||| |||||||||||||||| |||||||| |||||||||| ||||  |||  |||| |||||| ||||||    
T  17527576 gactttaagacctaattgctcattcaagccgtcatactaaaaagtttagaattttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgat 17527674  T
Q  298 gc 299  Q
    ||    
T  17527675 gc 17527676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 3 - 191
Target Start/End: Original strand, 20989284 - 20989473
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |    
T  20989284 tgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcttataaatgttccgatattttacgactttccatatct 20989383  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatat 191  Q
    |||||| ||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||    
T  20989384 gtttctaattcttgtttttctgattagctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaaattgattcagtatat 20989473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 3 - 272
Target Start/End: Original strand, 19894164 - 19894432
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| | ||| ||| |||||||| |||||| || ||||||||||||| || ||||||||||||||||||||||| ||||    
T  19894164 tgtggaatatttctaaagtgtattttacattatagaaaatatttattattgttttgaacgatcctatacattttccgacattttaggactttccagattt 19894263  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||||||| |||||||||||||| | ||||||||| |||| || | |||||||||||| || | |||||||||| |||||||||||||||||||||||    
T  19894264 gtttctgattattgttttgcagattaagctgaaccgaactgcattttactgaagcccaacgaa-tttttagcccaagctgcttcagtatataaggaagac 19894362  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||| |||||||||| ||| | || |||||||||||||||||||| |||||||||| ||||    
T  19894363 ttcaagacctaattgttcattcaagctgtcattct-aaaagtttagatttttaggg-tttgagtcttcatgt 19894432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 21722900 - 21723169
Alignment:
Q  2 ctgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||  ||| ||||||||||||| | |||    
T  21722900 ctgtagaatatttctaaagtagatattatattttaggaaatatttattattatttggaacgatcctataaatgttttgactttttaggactttcaagatt 21722999  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
     || ||||||||||||| ||||||||| ||||||| || |||||||  || ||||||||| || |||||||||||| |||||||||||||||| ||||||    
T  21723000 agtctctgattcttgttatgcagattagctgaacctatttgctttgcactaaagcccaacgaattatttagcccaagctgcttcagtatataaagaagac 21723099  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||| |||||||| | ||||| |||||| | || |||||||||||||||||||| |||||||||| ||||    
T  21723100 ttcaagccctaattgtttattcatgccgtcattct-aaaagtttagatttttaggg-tttgagtcttcatgt 21723169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 9281203 - 9281471
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||| ||||||||||||||  |||| || ||||||||||||||| |||||| || ||||||||||||||||||||||||||||||| |||||||| |||    
T  9281203 ctgtgaaatatttctaaagtgtattttatgttttaggaaatatttattattgtttagaacgatcctataaatgttccgacattttagaactttccagatt 9281302  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||||||||||||||||| |||||| | |||||||||||||| || | |||||||||||| |  |||||||||||| |||||||||  |||||||||||    
T  9281303 tgtttctgattcttgttttacagattaagctgaaccgatctgcattttactgaagcccaacgagttatttagcccaagctgcttcag--tataaggaaga 9281400  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||||| |||||||||| ||| | || ||||||||| |||| ||||| |||||||||| ||||    
T  9281401 cttcaagacctaattgttcattcaagcagtcattct-aaaagtttaaatttgtaggg-tttgagtcttcatgt 9281471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 17855861 - 17855593
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||| |||||  |||| |||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||    
T  17855861 ctgtggaatatttcgaaagtgtattttatattttaggaaatatttattattgttcggaacgatcctataaatgttccgacattttaggactttccagatt 17855762  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||| ||||||||||||||||| | |||||||||||||  || | |||||||||||| |  ||||||| |||| ||||||||||||||||||||||    
T  17855761 tgtttctgcttcttgttttgcagattaagctgaaccgatctgaattttactgaagcccaacgagttatttag-ccaagctgcttcagtatataaggaaga 17855663  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||||  | |||||||| ||| | || |||   |||||||||| ||| |||||||||||||||    
T  17855662 cttcaagacctaattctttattcaagctgtcattctgaaa--gttagattttt-ggggtttgagtctttatgt 17855593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 2 - 193
Target Start/End: Original strand, 12028636 - 12028828
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  12028636 ctgtggaatatttctaaagtagattttatattttggcaaatatttgttattggctggaacgatcttataaatgttccgacattttaggacttttcatatt 12028735  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataa 193  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||| | || ||||||||| |||||||||| |||| ||||||||||||||||    
T  12028736 tgtttctgaattctgttttgcagattagctgaaccgatctgctttttactaaagcccaacgaagtatttagtccaagctgcttcagtatataa 12028828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 2 - 176
Target Start/End: Complemental strand, 20653735 - 20653559
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||||| || | ||||||||| | ||||||| ||||||||||||||||||||||    
T  20653735 ctgtggaatatttctaaagtaatatttatattttaagaaatatttgttattgttttggacgatcctaaagatgttccaacattttaggactttccatatt 20653636  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaa 176  Q
    |||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  20653635 tgtttctgattcttgttttgcatattagctgaactgatctgctttgtgttgaagcccaactaatgtatttagcccaa 20653559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 140 - 272
Target Start/End: Complemental strand, 14259443 - 14259311
Alignment:
Q  140 tgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaa 239  Q
    ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||    
T  14259443 tgcttcgtgcttaagcccaactaagtatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgatcattcaagtcgtcatattaaaa 14259344  T
Q  240 agtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||||||||||||||||||||||    
T  14259343 agtttagatttttagggttttgagtctttatgt 14259311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 26 - 290
Target Start/End: Original strand, 23882216 - 23882479
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    |||||||||||||||||||||    || || | ||| ||||| | ||||||| |||||||||||||||||| |||| | ||||||||||||| |||||||    
T  23882216 ttatattttaggaaatatttgaagctgttttggacgttcctaaagatgttcctacattttaggactttccaaatttttctctgattcttgttatgcagat 23882315  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaactaagtat-ttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    || |||||| ||| |||||||| ||||| ||||||   || | ||||||||   |||||||||||||||||||| |||||||||||||||||||||||||    
T  23882316 tagctgaac-gatttgctttgttctgaaacccaacatcgtttattagcccatattgcttcagtatataaggaaggcttcaagacctaattgatcattcaa 23882414  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgt 290  Q
    |||||| |  || |||||||||| |||||||||||||||||||| |||| |||| |||| ||||||    
T  23882415 gccgtcattatataaagtttaga-ttttagggttttgagtctttgtgtgttctactcttgtatcgt 23882479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 194
Target Start/End: Complemental strand, 25806070 - 25805880
Alignment:
Q  6 ggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtt 104  Q
    ||||||||| |||||||| ||||||||||||||| ||||||  ||||| ||   ||||||||| | ||||||||||| |||||||||||||||||||||     
T  25806070 ggaatatttttaaagtagcatttatattttaggagatatttaatattgttttagacgatcctaaagatgttccgacactttaggactttccatatttgtc 25805971  T
Q  105 tctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataag 194  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | || || |||| | || ||||||||||||||    
T  25805970 tctgattcctgttttgcagattagctgaaccgatctgctttgtgctgaagcccaactagaatacttggcccgagctacttcagtatataag 25805880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 21706024 - 21706182
Alignment:
Q  3 tgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||||  |||||| |||||||||||||||||||||||||||||||||||| |||     
T  21706024 tgtggaatatttctaaagtagatattatattttaggaaatatttattattatttggaatgatcctataaatgttccgacattttaggactttccagatta 21706123  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaac 160  Q
    || |||||||| ||||||| ||||||  |||||  ||||||||||  ||||||||||||    
T  21706124 gtctctgattcatgttttgtagattagttgaactaatctgctttgcactgaagcccaac 21706182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 17876248 - 17876393
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||  || |  |||||||| | |||||||||||||||||||||||| ||||||    
T  17876248 tgtggaatatttctaaagtaatatttatattttaggaaatgtttgttatttttttgttcgatcctaaagatgttccgacattttaggactttcgatattt 17876347  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgt 147  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  17876348 gtttttgattcttgttttgcagattagctgaaccgatctgctttgt 17876393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 288
Target Start/End: Original strand, 29253176 - 29253461
Alignment:
Q  3 tgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| |||||||||   |||||||||||||||||||||    || ||   ||| |||||   ||||||| |||||||||||||||||||||||    
T  29253176 tgtggaatattcctaaagtagtgattatattttaggaaatatttgaagctgttttagacgttcctaacgatgttcctacattttaggactttccatattt 29253275  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagac 200  Q
    || |||||||| |||||||||||| | ||| | ||||||| |||||  ||||||||||| | | |||||  ||| | ||||||||||||| |||||||||    
T  29253276 gtctctgattcctgttttgcagatcagctgga-cgatctgttttgttttgaagcccaacaagaatatttgacccgagctgcttcagtataaaaggaagac 29253374  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
      |||||||||||||||||| |||||| || | |||||||||||||  ||||||| ||||||||||| ||||| ||||||||| ||||    
T  29253375 aacaagacctaattgatcatccaagccatcattctaaaaagtttag-cttttaggattttgagtcttcatgtgttctattcttgtatc 29253461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 17863968 - 17864086
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||||| || | |||||||||   |||||||||||||||||||||||||||||||    
T  17863968 tgtggaatatttctaaagtaatatttatattttagaaaatatttgttattgttttggacgatcctaatgatgttccgacattttaggactttccatattt 17864067  T
Q  102 gtttctgattcttgttttg 120  Q
    |||||||||||||||||||    
T  17864068 gtttctgattcttgttttg 17864086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 71 - 265
Target Start/End: Original strand, 15930411 - 15930603
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||||||||||||||| |||||||| |||||||| |||||||||||| |  || || ||||||||||||  | ||||||||  | || |  |    
T  15930411 atgttcctacattttaggactttctatatttgtctctgattcgtgttttgcagatcagttggac-gatctgctttgttttaaagcccaaacatgttaaat 15930509  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
     |||||   |||||||||||| || ||||||||||||||||||||||  |||||||||||| | ||||||||| |||   ||||||||||||||||    
T  15930510 ggcccatattgcttcagtataaaacgaagacttcaagacctaattgagaattcaagccgtcattctaaaaagtatag--ctttagggttttgagtc 15930603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 288
Target Start/End: Original strand, 17864087 - 17864206
Alignment:
Q  169 tagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
    |||||||| ||||||||| |||||||| ||| ||||||| |||||   |||||||||||||| | ||| ||||||||||||||| |||||||||||||      
T  17864087 tagcccaagctgcttcagcatataagggagatttcaagaactaatgattcattcaagccgtcattctataaagtttagatttttggggttttgagtctac 17864186  T
Q  269 atgtgctctattcttatatc 288  Q
    |||||||||| |||| ||||    
T  17864187 atgtgctctactcttgtatc 17864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 28623142 - 28623217
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttg 146  Q
    ||||||||||||||||||||||||||| ||||||| |||||  |||||||||||||| ||||||||||||||||||    
T  28623142 atgttccgacattttaggactttccatctttgtttatgatttctgttttgcagattagctgaaccgatctgctttg 28623217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 20989477 - 20989555
Alignment:
Q  221 tcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||  ||||||||    
T  20989477 tcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtcctctaatcttgtatcggttgtgatgc 20989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 26965137 - 26965280
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||||||| ||||||||||||||||| ||||||||||||  | |||| | |||||| ||| | | |||| |||||||||  | | || |||     
T  26965137 atgttcctacattttatgactttccatatttgttactgattcttgttacgtagatcagctgaac-gatgtacattgttctgaagccccgcaaggttattg 26965235  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaatt 214  Q
    |||| |   ||||||||||||||||||||||||||||||||||||    
T  26965236 agccaatattgcttcagtatataaggaagacttcaagacctaatt 26965280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 268
Target Start/End: Original strand, 21322949 - 21323037
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtact-aaaaagtttagatttttagggttttgagtcttt 268  Q
    ||||||||||| ||   |||||||||||||||||||||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||    
T  21322949 tgcttcagtatttatacaagacttcaagacctaattgataattcaagccgtcgtcctaaaaaagtctag--ttttagggttttgagtcttt 21323037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 25965151 - 25965063
Alignment:
Q  209 ctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||| |||||||||||||| |||||||||| |||||||||||||| |||||||||| ||||| |||  |||| |||||| ||||||||    
T  25965151 ctaattgttcattcaagccgtcatactaaaaag-ttagatttttaggg-tttgagtcttcatgtgttctgctcttgtatcgtttgtgatgc 25965063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 179 - 283
Target Start/End: Complemental strand, 24542141 - 24542037
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtgctct 277  Q
    ||||||||||||||   |||||||||||||||||||  | ||||||||||||  ||||||||| ||||| |||||||||||||||||| || |||| |||    
T  24542141 tgcttcagtatatattcaagacttcaagacctaattatttattcaagccgtcaaactaaaaaggtttag-tttttagggttttgagtcgttgtgtgttct 24542043  T
Q  278 attctt 283  Q
    | ||||    
T  24542042 actctt 24542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 230
Target Start/End: Complemental strand, 24564319 - 24564152
Alignment:
Q  63 tcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta 162  Q
    ||||| ||| ||||| || || |||||||||||||||||||| || |||||||||  | |||  | |||||| ||||| | ||||  ||||||||||| |    
T  24564319 tcctaaaaaagttcctaccttctaggactttccatatttgttactaattcttgttacgtagagcagctgaac-gatctacattgttatgaagcccaacaa 24564221  T
Q  163 agt-atttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
     || ||| ||| ||   ||||||||||||||||||||||||||||| ||||||  | ||||||||||||    
T  24564220 ggttattgagctcatattgcttcagtatataaggaagacttcaagatctaattattgattcaagccgtc 24564152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 17869587 - 17869638
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  17869587 tgcttcagtataaaaggaagacttcaagacctaattgattatgcaagccgtc 17869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 17879339 - 17879390
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    |||||||||||| |||||||||||||||||||||||||| || |||||||||    
T  17879339 tgcttcagtataaaaggaagacttcaagacctaattgattatgcaagccgtc 17879390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 209
Target Start/End: Complemental strand, 19658503 - 19658373
Alignment:
Q  79 acattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaat 177  Q
    |||||||||||| |||||||||||||  |||||||||||  | |||| | ||||| |||||| | |||| |||||||||||| | | |||| ||||||      
T  19658503 acattttaggaccttccatatttgttattgattcttgttacgtagatcagctgaa-cgatctacattgttctgaagcccaacaagattattgagcccata 19658405  T
Q  178 ctgcttcagtatataaggaagacttcaagacc 209  Q
     ||||||||||||||| ||||| |||||||||    
T  19658404 ttgcttcagtatataaagaagatttcaagacc 19658373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 298
Target Start/End: Complemental strand, 25805882 - 25805823
Alignment:
Q  239 aagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||  |||||||    
T  25805882 aagttttgatttttagggttttgagtctttatgtgctctactcttgtatcggttgtgatg 25805823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 23757750 - 23758048
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||    
T  23757750 ctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttttgacattttaggactttccagatt 23757849  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  23757850 tgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaactaagtatttatcccaagctgcttcagtatataaagaagac 23757949  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    | |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23757950 tacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgtttgtgatgc 23758048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 23823206 - 23823504
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||    
T  23823206 ctgtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttttgacattttaggactttccagatt 23823305  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  23823306 tgtttcgggttcttgtttggcagattagctgaaccgatctgctttgtgttgaagcccaactaagtatttatcccaagctgcttcagtatataaagaagac 23823405  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    | |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23823406 tacaagacctaattgatcattcaagctgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgtttgtgatgc 23823504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 3 - 299
Target Start/End: Original strand, 23420051 - 23420347
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  23420051 tgtggaatatttctaaagtagtttttatattttaggaaatatttattattggttggaacgatcctataaatgttccgacattttaggactttcagtattt 23420150  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||| || ||||||||| |||  ||||||    
T  23420151 gtttctgattcttgttttgcagattagctgaaccgatctgctttgttctgaagcccaactaattatttagcccaagctacttcagtatgtaaaaaagact 23420250  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  23420251 tcaagacctaattgctcattcaagccgtcatactaaaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 23420347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 9422009 - 9422305
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| |  ||    
T  9422009 ctgtgaaatatttctaaattagattttatattttaggaaatatttattattggttggaacgatcctataaatgttccaacattttaggactttctagttt 9422108  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  9422109 tgtttctgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagtccaactaagtatttagcccaaactgcttcagtatataaggaagac 9422208  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||| ||||||||| | |||||||||||| | |||||||||||||||||||||||  ||||||||| ||||  | |  |||| |||||||||||||||    
T  9422209 ttcaatacctaattg-ttattcaagccgtcattctaaaaagtttagatttttaggg-attgagtcttcatgtattatgctcttgtatcgtctgtgatgc 9422305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 2 - 260
Target Start/End: Complemental strand, 24190529 - 24190268
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||| |||||||||||||||  |||| ||||||||||||||||||  ||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  24190529 ctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattttttggaacgatcctataaatgttccgacattttaggactttccagatt 24190430  T
Q  101 tgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||||||||||||||||||||||||  |||||||||||||| ||||  ||||||||||||  | |||||||||||| |||||||||||||||||||||    
T  24190429 tgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttactgaagcccaacatattatttagcccaagctgcttcagtatataaggaag 24190330  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggtttt 260  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  24190329 acttcaagacctaattgttcattcaagccgtcatactaaaaagtttagatttttagggtttt 24190268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 22251534 - 22251803
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||  ||||| || |||||||| |||||||||| |||||||||||||||||||| |||    
T  22251534 ctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgttttgaacgatcgtataaatgttgcgacattttaggactttccagatt 22251633  T
Q  101 tgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||| | |||||||||||||||||||  ||||||| |||||| || |||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  22251634 tgtttattattcttgttttgcagattaagctgaacctatctgcattttgctgaagcccaacgaattatttagcccaagctgcttcagtatataaggaaga 22251733  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||||| |||||||||||||| | ||||||   |||||||||||||| |||||||||| ||||    
T  22251734 cttcaagacctaattgttcattcaagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgt 22251803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 22404253 - 22404513
Alignment:
Q  1 actgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaa-tgttccgacattttaggactttccata 98  Q
    |||||| ||||||||||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||||  | |    
T  22404253 actgtgaaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaaatgtttcgacattttaggactttataga 22404352  T
Q  99 tttgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaa 197  Q
    ||||||| |||||||||||||||||||||  |||||||||||||| || | |||||||||||| || |||||||||||| ||||||||||||||||||||    
T  22404353 tttgtttatgattcttgttttgcagattaagctgaaccgatctgcattttactgaagcccaacgaattatttagcccaagctgcttcagtatataaggaa 22404452  T
Q  198 gacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    |||||||||||||||||||| |||||||||||| | || |||| ||||||||||||||||||    
T  22404453 gacttcaagacctaattgattattcaagccgtcattct-aaaattttagatttttagggttt 22404513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 265
Target Start/End: Complemental strand, 26037443 - 26037181
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| || | ||||||||| | |||||||||||||||||||||||||||||||    
T  26037443 tgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatattt 26037344  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    | ||||||||| |||||||||||||| |||||| ||||| |||||| |||||||| |||| ||||||||  ||| | |||||||||||||||||| ||||    
T  26037343 g-ttctgattc-tgttttgcagattagctgaactgatcttctttgttctgaagccaaactaaagtatttgacccgagctgcttcagtatataagggagac 26037246  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    |||||||||||||  |  |||||||||||| | ||||||||||||||||||||||||||||||||    
T  26037245 ttcaagacctaatgaactattcaagccgtcattctaaaaagtttagatttttagggttttgagtc 26037181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 3 - 288
Target Start/End: Complemental strand, 38406026 - 38405740
Alignment:
Q  3 tgtggaatatttctaaagtaga-tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| ||||||||   ||||||||||||||||||||| |||||| || | ||||||||| ||||| |||||||||||||||||||||||||||    
T  38406026 tgtggaatattcctaaagtaatgtttatattttaggaaatattttttattgttttggacgatcctaaaaatgatccgacattttaggactttccatattt 38405927  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagac 200  Q
    || ||||||||||||||||||||| | ||| | ||||||| ||||| |||||||| ||||| | |||||  |||||  ||||||||||||||||||||||    
T  38405926 gtctctgattcttgttttgcagatcatctgga-cgatctgttttgttctgaagccaaactagaatatttgacccaagatgcttcagtatataaggaagac 38405828  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    |||||||| |||||||  ||||||||| || | ||||||||||||||||||||| |||||||||||  |||||||||| |||| ||||    
T  38405827 ttcaagacttaattgagtattcaagccttcattctaaaaagtttagatttttagtgttttgagtctacatgtgctctactcttgtatc 38405740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 5 - 259
Target Start/End: Original strand, 22245855 - 22246109
Alignment:
Q  5 tggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    |||||||||||||||||  |||| ||||||||||||||||||  ||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  22245855 tggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctatacatgttccgacattttaggactttccagatttgt 22245954  T
Q  104 ttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    || ||||||| |||||||||||| |  ||||||||||||| || |||||||||||||| |  |||||||||||| |||||  ||||||||||||||||||    
T  22245955 ttttgattctcgttttgcagattaagttgaaccgatctgcattttgctgaagcccaacgagttatttagcccaagctgctatagtatataaggaagactt 22246054  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    ||||||||||||| ||||||||| |||| | ||||||   |||||||||||||||||    
T  22246055 caagacctaattgttcattcaagtcgtcattctaaaa--gttagatttttagggttt 22246109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 280
Target Start/End: Original strand, 22082185 - 22082461
Alignment:
Q  3 tgtggaatatttctaaagtaga-tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||| || | ||||||||| | |||||| ||||||||| ||||||||||||||    
T  22082185 tgtggaatattcctaaagtagtgtttatattttaggaaatatttgttattgttttggacgatcctaaagatgttctgacattttaagactttccatattt 22082284  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    || |||||||||||||||||| || | ||| | ||||||| ||||| ||| || ||||| ||||||||  ||| | |||||| ||||||||||| |||||    
T  22082285 gtctctgattcttgttttgcatatcagctgga-cgatctgttttgttctggagtccaacaaagtatttgacccgagctgctttagtatataagggagact 22082383  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctatt 280  Q
    |||| |||||||||| ||||||||| ||| | |||||||||||||  |||||| |||||||||||  ||||| ||||||    
T  22082384 tcaaaacctaattgagcattcaagctgtcattctaaaaagtttag-cttttagagttttgagtctacatgtgttctatt 22082461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 25104958 - 25105234
Alignment:
Q  7 gaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    |||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25104958 gaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgttt 25105057  T
Q  106 ctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||||||||||||||||||||| | |||||||||||||| ||| |  |||||||||                || ||||||||||||||||||||||||||    
T  25105058 ctgattcttgttttgcagattaagctgaaccgatctgcattgttattgaagccca----------------aagctgcttcagtatataaggaagacttc 25105141  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||  ||||||||||| || | ||||||   |||||||||||||| |||||||||| ||||  |||| |||| |||||| ||||||||    
T  25105142 aagacctaatttttcattcaagccatcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctactcttgtatcgtttgtgatgc 25105234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 25164051 - 25164327
Alignment:
Q  7 gaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    |||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25164051 gaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgttt 25164150  T
Q  106 ctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||||||||||||||||||||| | |||||||||||||| ||| |  |||||||||                || ||||||||||||||||||||||||||    
T  25164151 ctgattcttgttttgcagattaagctgaaccgatctgcattgttattgaagccca----------------aagctgcttcagtatataaggaagacttc 25164234  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||  ||||||||||| || | ||||||   |||||||||||||| |||||||||| ||||  |||| |||| |||||| ||||||||    
T  25164235 aagacctaatttttcattcaagccatcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctactcttgtatcgtttgtgatgc 25164327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 264
Target Start/End: Original strand, 30605185 - 30605448
Alignment:
Q  3 tgtggaatatttctaaagtaga-tttatattttaggaaatatttgttattggttgga-acgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||| ||||||| |  ||||||||||||||||||||||   ||| || |  ||||||||| | ||||||||||||| ||||||||||||||||    
T  30605185 tgtggaatattcctaaagttgtgtttatattttaggaaatatttgaagttgttttgtgacgatcctaaagatgttccgacattataggactttccatatt 30605284  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaag--tatttagcccaatctgcttcagtatataaggaag 198  Q
    ||||||| ||||||||||||||||| |  || | ||||||| ||||| |||||||||||| |||  |||||  |   |  ||||||||||||||||| ||    
T  30605285 tgtttctaattcttgttttgcagatcagttgga-cgatctgttttgttctgaagcccaac-aagtttatttgacttgagttgcttcagtatataagggag 30605382  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagt 264  Q
    |||||||||||||||  |  |||||||||||  | |||||||||||||||||||||||||||||||    
T  30605383 acttcaagacctaatgaactattcaagccgtaattctaaaaagtttagatttttagggttttgagt 30605448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 26 - 288
Target Start/End: Original strand, 26328733 - 26328994
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    ||||||||||| ||||||||  | ||| || | ||| ||||| | |||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  26328733 ttatattttagaaaatatttaatgttgttttggacgctcctaaagatgttctgacattttaggactttccatatttgtctctgattcttgttttgcagat 26328832  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
     | ||| | ||||||| ||||| |||||||||||| | | |||||  |||   ||||||| ||||| ||||||||| ||||||||||||  | |||||||    
T  26328833 cagctgga-cgatctgttttgttctgaagcccaacaataatatttgacccttgctgcttcggtataaaaggaagacatcaagacctaatgaaccattcaa 26328931  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    |||||| | ||||| |||||||  |||||||||||||||| |  ||||| ||||||||| ||||    
T  26328932 gccgtcattctaaagagtttag-cttttagggttttgagtatacatgtgttctattcttgtatc 26328994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 288
Target Start/End: Complemental strand, 18221750 - 18221489
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    ||||||||||| |||||||||   ||| || | ||  ||||| | ||||||| ||||||||||||||||||||||||| | |||||| |||||  |||||    
T  18221750 ttatattttagaaaatatttgaagttgttttggacattcctaaagatgttcctacattttaggactttccatatttgtctatgattcctgtttcacagat 18221651  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaactaagt-atttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
     | ||| ||  ||||| ||||| |||||| ||||  || | ||||  | | | |||||||| |||| |||||||||  ||||||||||||||||||||||    
T  18221650 cagctggaca-atctgttttgttctgaagaccaagaaaattatttgactcgagctgcttcattataaaaggaagacaacaagacctaattgatcattcaa 18221552  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    || | | | |||||||||||||  ||||||||||||||||||| ||||| ||||||||| ||||    
T  18221551 gcggacattctaaaaagtttag-cttttagggttttgagtcttcatgtgttctattcttgtatc 18221489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 251
Target Start/End: Complemental strand, 23624512 - 23624291
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    ||||||||||||||||||| ||| ||  |||||| | ||||| | ||||||| ||||||||||||||| | | ||||| |||||||| ||||||||||||    
T  23624512 ttatattttaggaaatatt-gttgtt--ttggaa-gttcctaaagatgttcctacattttaggacttttcttttttgtctctgattcctgttttgcagat 23624417  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
     | ||  || |||||| ||||| |||||||||||| | |||||||  ||| | |||||||||||||||| | |||||||||||||||||  |  ||||||    
T  23624416 cagctagac-gatctgttttgtactgaagcccaacaagagtatttgacccgagctgcttcagtatataaaggagacttcaagacctaatgaactattcaa 23624318  T
Q  225 gccgtcgtactaaaaagtttagatttt 251  Q
    |||||| | ||||||||||||| ||||    
T  23624317 gccgtcattctaaaaagtttagctttt 23624291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 71 - 290
Target Start/End: Original strand, 20714305 - 20714521
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtattta 170  Q
    ||||||| || | |||||||||||| |||||||| ||||||| | ||||| |||||| ||| || ||||| ||||||  | ||||||||  | ||         
T  20714305 atgttcctacttcttaggactttccttatttgttactgattcgtattttgtagattagctggac-gatctactttgttttaaagcccaaacaggttaaat 20714403  T
Q  171 gcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttat 270  Q
    |||| || ||||||||||||||||||||||||||||||||||||||  |||||| ||||| |    |||||| ||| ||||||||||||||||| ||| |    
T  20714404 gccccatttgcttcagtatataaggaagacttcaagacctaattgaatattcaaaccgtcatttctaaaagtctag-tttttagggttttgagtttttgt 20714502  T
Q  271 gtgctctattcttatatcgt 290  Q
    ||| |||| |||| ||||||    
T  20714503 gtg-tctactcttgtatcgt 20714521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 19634546 - 19634248
Alignment:
Q  2 ctgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||| |||||||||||||||||||||||||||||||| |||    
T  19634546 ctgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaatgattctataaatgttccgacattttaggactttccagatt 19634447  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||| ||  |||||  |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  19634446 tgtttctgattcttgttttgcaggtttgctgaattgatcagctttgtgctgaagcccaactaagtatttagcccaagttgcttcagtatataaggaagac 19634347  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  19634346 ttcaagacctaattgttaattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgtttatgatgc 19634248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 18548315 - 18548017
Alignment:
Q  1 actgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatat 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| ||    
T  18548315 actgtggaatatttctaaagtagatattatattttaggaaatatttattattgtttggaacgatcctgtaaatgttccgacattttaggactttccagat 18548216  T
Q  100 ttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||    
T  18548215 ttgtttctgattcttgttttgcagattagctgaaccgatttgctttgtgctgaagcccatctaaatatttagcccaagctgcttcagtatataaagaaga 18548116  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| ||||||||| |||||||||||||| | |||||||||||||||||||| || |||||||||| ||||  |||  |||| |||||| ||||||||    
T  18548115 cttcaaaacctaattgttcattcaagccgtcattctaaaaagtttagatttttaagg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 18548017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 272
Target Start/End: Complemental strand, 44453137 - 44452879
Alignment:
Q  13 ttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgatt 111  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  44453137 ttctaaagtagattttatattttaggaaatatttattattggttggaacaatcctataaatgttccgacattttaggacttttcagttttgtttctgatt 44453038  T
Q  112 cttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagaccta 211  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  44453037 cttgttttgcagattagctgaaccgatctactttgtgctgaagcccaactaagtatttagcccaagctgcttcagtatataagaaagacttcaagaccta 44452938  T
Q  212 attgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||| | |||||||||||| | ||||||||||||||||||||||| |||||||||| ||||    
T  44452937 attg-ttattcaagccgtcattctaaaaagtttagatttttaggg-tttgagtcttcatgt 44452879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 6 - 299
Target Start/End: Original strand, 18063704 - 18063999
Alignment:
Q  6 ggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtt 104  Q
    |||||||||||||||||| ||||||||||||||||||||||  ||||| || | ||| | ||| | ||||| |||||||||||||||||||||||||||     
T  18063704 ggaatatttctaaagtagtatttatattttaggaaatatttaatattgttttggacgtttctaaagatgtttcgacattttaggactttccatatttgtc 18063803  T
Q  105 tctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||| | ||||| |||| | ||||||||||||||||||||||||||    
T  18063804 tctaattcttgttttgcagattagctaaaccgatctgctttgtgctgaagcccaactagaatatttggcccgagctgcttcagtatataaggaagacttc 18063903  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    || ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| || | |||||| ||||||||    
T  18063904 aatacctaattgttcattcaagccgtcatactaaaaagtttagatttttacggttttgagtctttatgtgctctactcatgtatcgtttgtgatgc 18063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 3 - 299
Target Start/End: Complemental strand, 13791342 - 13791047
Alignment:
Q  3 tgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||| || |||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||||||||||||||| ||||    
T  13791342 tgtggaatatttctaaagtaaatattatattttaggaaatatttattattgtttggaacaatcctataaatgttctgacattttaggactttccagattt 13791243  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||| |||||||||||||||||| | |||||||||||||| || |||||||||||||| |  |||||||||||| |||||||||||||||||||||||    
T  13791242 gtttctaattcttgttttgcagattaagctgaaccgatctgcattttgctgaagcccaacgatttatttagcccaagctgcttcagtatataaggaagac 13791143  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||||| |||||||||||| | ||||||   |||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  13791142 ttcaagacctaattgattattcaagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 13791047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 3 - 272
Target Start/End: Original strand, 18482867 - 18483136
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| |||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||| || ||||    
T  18482867 tgtggaatatttctaaagtgtattttatattttaggaaatatttattcttgtttggaacgatcctataaatgttctgacattttaggacttttcagattt 18482966  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||| ||||||||||||||||||| | |||||||||||||| || |||||||||| ||| || |||||||||||| |||||||||||||||||||||||    
T  18482967 gtttccgattcttgttttgcagattaagctgaaccgatctgcattatgctgaagccaaacgaattatttagcccaagctgcttcagtatataaggaagac 18483066  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||| ||||||||| |||| | || |||||||||||||||||||| |||||||||||||||    
T  18483067 ttcaagacctaattgttcattcaagtcgtcattct-aaaagtttagatttttaggg-tttgagtctttatgt 18483136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 2 - 272
Target Start/End: Complemental strand, 24196191 - 24195919
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||| |||||||||||||||||||| || |||    
T  24196191 ctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatattccgacattttaggacttttcaaatt 24196092  T
Q  101 tgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||||||||||||||||||||||||  |||||| ||||| | ||||  ||||| ||||||  | |||||||||||| |||||||||||||||||||||    
T  24196091 tgtttctgattcttgttttgcagattaagctgaactgatctacattgttactgaaacccaacatattatttagcccaagctgcttcagtatataaggaag 24195992  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||    
T  24195991 acttcaagacctaattgttcattcaagccgtcatactaaaaagtttagatttttaggg-tttgagtcttcatgt 24195919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 7 - 259
Target Start/End: Original strand, 7028569 - 7028824
Alignment:
Q  7 gaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    |||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7028569 gaatatttctaaagtgtattttatattttaggaaatattttatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgttt 7028668  T
Q  106 ctgattcttgttttgcagatt-acctgaaccgatctgc-tttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||||||||||||||||||||| |  ||||||||||||| ||  | ||||||||||||  | |||||||||||| ||||||||||| ||||||||||||||    
T  7028669 ctgattcttgttttgcagattaagttgaaccgatctgcattattactgaagcccaacgtattatttagcccaagctgcttcagtacataaggaagacttc 7028768  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    |||||||||||| | ||| |||||||| || |||||||||||||||||||||||||    
T  7028769 aagacctaattgtttatttaagccgtcatattaaaaagtttagatttttagggttt 7028824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 23954051 - 23954322
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  23954051 ctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatactataaatgttccgacattttaggactttccagatt 23954150  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    ||||| |||||||||||||||||||| | |||||||||||| | ||| | ||||||||||||  | |||||||||||| |||||||||||||||| ||||    
T  23954151 tgtttttgattcttgttttgcagattaagctgaaccgatctccattgttactgaagcccaacatattatttagcccaaactgcttcagtatataaagaag 23954250  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||||||||| |||||||||||||| | || ||||||||||||||| | || |||||||||| ||||    
T  23954251 acttcaagacctaattgttcattcaagccgtcattct-aaaagtttagattttcaagg-tttgagtcttcatgt 23954322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 17135638 - 17135934
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  17135638 ctgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttagaactttccagatt 17135737  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    ||||| |||||||||||||| ||||| | || |||| |||||| ||| | |||||||||||| || |||||||||||| ||||||||||||||||  |||    
T  17135738 tgtttttgattcttgttttgaagattaagctaaaccaatctgcattgttactgaagcccaacgaattatttagcccaagctgcttcagtatataa-taag 17135836  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    ||||||||||||||||| ||||||||||| || | ||||||   |||||||||||||| |||||||||| ||||  |||  |||| |||||| |||||||    
T  17135837 acttcaagacctaattgttcattcaagccatcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatg 17135933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 25 - 299
Target Start/End: Original strand, 1918761 - 1919034
Alignment:
Q  25 tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcaga 124  Q
    |||||||||||||||||||||  ||||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  1918761 tttatattttaggaaatatttaatattgtttggaagggtcctataaatgctccgacattttaggactttccagatttgtttttgattcttgttttgcaga 1918860  T
Q  125 tt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattc 222  Q
    || |  |||||  || ||| ||| | ||||||||||||  | |||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||    
T  1918861 ttaagttgaactaatatgcattgttactgaagcccaacatattatttagcccaagctgcttcagtatataaggaagactttaagacctaattgttcattc 1918960  T
Q  223 aagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||| | ||||||   |||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  1918961 aagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 1919034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 13515113 - 13515266
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  13515113 tgtggaatatttcaaaagtagattttatattttaggaaatatttgttattggttggaacgatcctataaatgttacgacattttaggcctttccatattt 13515212  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagc 155  Q
    |||| ||||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  13515213 gtttatgattcttgttttgcagattagctgagccgatctactttgtgctgaagc 13515266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 178 - 299
Target Start/End: Original strand, 13515266 - 13515387
Alignment:
Q  178 ctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctct 277  Q
    |||||||||| |||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13515266 ctgcttcagtttataaggaagacttcaagacttaatttatcattcaagccgtcatactaaaaagtttagatttttagggttttgagtctttatgtgctct 13515365  T
Q  278 attcttatatcgtctgtgatgc 299  Q
    |||||| |||||| ||||||||    
T  13515366 attcttgtatcgtttgtgatgc 13515387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 165 - 299
Target Start/End: Original strand, 18034554 - 18034688
Alignment:
Q  165 tatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagt 264  Q
    |||||||||| | || |||||||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||    
T  18034554 tatttagcccgagcttcttcagtatataagtaagacttcaagacctaatttttcattcaagccgtcatactaaaaagtttagatttttagggttttgagt 18034653  T
Q  265 ctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||| |||| ||| || ||||||||    
T  18034654 ctttatgtgctctactcttgtattgtttgtgatgc 18034688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 4 - 160
Target Start/End: Complemental strand, 296105 - 295949
Alignment:
Q  4 gtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||||||| || | ||||||||| | ||||||||||||||||||||||||||||||||    
T  296105 gtggaatattcctaaagttgcatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatatttg 296006  T
Q  103 tttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaac 160  Q
    | ||||||||||||||||||||| | ||| | ||||||| ||||| ||||||||||||    
T  296005 tctctgattcttgttttgcagatcaactgga-cgatctgttttgttctgaagcccaac 295949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 2 - 199
Target Start/End: Original strand, 15572496 - 15572687
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||| |||||  |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||| |  |||    
T  15572496 ctgtggaatatttcaaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaatgttccgacattttaagacttttctgatt 15572595  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||||| |       ||||||||||| || ||||||||||| ||||| ||||||||||| || ||||||||  || |||||||| |||||||||||||    
T  15572596 tgtttctaa-------tttgcagattagcttaaccgatctgcattgtgttgaagcccaacgaattatttagcttaagctgcttcaatatataaggaaga 15572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 268
Target Start/End: Original strand, 21253515 - 21253756
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    |||||||||||||||||||||    || || | ||| ||||| | ||||||  | |||||| |||||||||| ||||| |||||| || |||||||||||    
T  21253515 ttatattttaggaaatatttgaagctgttttggacgttcctaaagatgttcttatattttatgactttccatttttgtctctgatactggttttgcagat 21253614  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaactaagtat-ttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    || ||| || |||||||||||| |||||||||||  | || | ||||||||   ||||||||||||||| |||||| |||||||||||||  ||||||||    
T  21253615 tagctggac-gatctgctttgttctgaagcccaataaggtttattagcccatattgcttcagtatataatgaagacatcaagacctaattattcattcaa 21253713  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
    ||| || | ||||||||||||| ||| |||||||||||||||||    
T  21253714 gccctcattctaaaaagtttag-tttgtagggttttgagtcttt 21253756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 28051778 - 28051680
Alignment:
Q  27 tatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    ||||||||||||||||||||   ||| || | ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28051778 tatattttaggaaatatttgaagttgttttggacgctcctaaagatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 28051680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 195 - 299
Target Start/End: Original strand, 15635559 - 15635662
Alignment:
Q  195 gaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgt 294  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| |||    
T  15635559 gaagacttcaagaactaattgttcattcaagccgtcatactaaaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgt 15635657  T
Q  295 gatgc 299  Q
    |||||    
T  15635658 gatgc 15635662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 17702872 - 17702775
Alignment:
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| |||||||| ||||||||||| || ||||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  17702872 ttcaagccctaattgttcattcaagccatcatactaaaaagtttagatttttaggg-tttgagtcttcatgtattctcgtcttgtatcgtttgtgatgc 17702775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 6579219 - 6579330
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtgctct 277  Q
    ||||||| |||||||  |||||||||||||||||||  |||   ||||||||  ||||||||| ||||| ||||||||||||||||||||| |||| |||    
T  6579219 tgcttcaatatataaacaagacttcaagacctaatttgtcaccgaagccgtcaaactaaaaaggtttag-tttttagggttttgagtctttgtgtgttct 6579317  T
Q  278 attcttatatcgt 290  Q
    | |||| ||||||    
T  6579318 actcttgtatcgt 6579330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 283
Target Start/End: Original strand, 17042425 - 17042528
Alignment:
Q  180 gcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctat 279  Q
    |||||||||||||   ||||||||||||  |||||  ||||||||||||||  ||||||||||||   ||| ||||||||||||||||| |||| ||||     
T  17042425 gcttcagtatatattcaagacttcaagatttaattattcattcaagccgtcaaactaaaaagttttagtttgtagggttttgagtctttgtgtgttctac 17042524  T
Q  280 tctt 283  Q
    ||||    
T  17042525 tctt 17042528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 99 - 290
Target Start/End: Original strand, 286488 - 286677
Alignment:
Q  99 tttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtat-ttagcccaatctgcttcagtatataaggaa 197  Q
    |||||| ||||||| ||||||| |||| | ||| || ||||| |||||| |||||||| ||| | || | ||||| ||   ||||| |||||||||||||    
T  286488 tttgttactgattcgtgttttgtagatcagctggac-gatctactttgttctgaagcctaacaaggtttattagcacatattgctttagtatataaggaa 286586  T
Q  198 gacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgt 290  Q
    |||||||||||||||||    |||||||||||| |    || ||| ||| ||||||||||||||||||||| |||| |||| |||| ||||||    
T  286587 gacttcaagacctaattaggtattcaagccgtcatttctaagagtctag-tttttagggttttgagtctttgtgtg-tctactcttgtatcgt 286677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 214
Target Start/End: Original strand, 979948 - 980083
Alignment:
Q  79 acattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtattt-agcccaat 177  Q
    |||| |||||||||||| |||||||| |||||||||||| || | || |  ||||| ||||| ||||||  ||||||||||| | ||   | ||||||      
T  979948 acatattaggactttccttatttgttactgattcttgttatgtacatcagttgaac-gatctactttgttatgaagcccaacaaggttcatgagcccata 980046  T
Q  178 ctgcttcagtatataaggaagacttcaagacctaatt 214  Q
     |||||||| |||||||||||||||||||||||||||    
T  980047 ttgcttcaggatataaggaagacttcaagacctaatt 980083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 288
Target Start/End: Complemental strand, 295885 - 295831
Alignment:
Q  234 ctaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    ||||||| |||||||||||||| |||||| |||  |||||||||| |||||||||    
T  295885 ctaaaaattttagatttttaggattttgattctacatgtgctctactcttatatc 295831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 298
Target Start/End: Original strand, 16207379 - 16207671
Alignment:
Q  7 gaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  16207379 gaatatttctaaagtatattttatattttaggaaatattttttattggttggaacgatcctataaatgttccgatatgttaggactttccatatttgttt 16207478  T
Q  106 ctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaa 205  Q
    || |||||||||||||||||||  ||  ||||||||||||||||||||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  16207479 ctaattcttgttttgcagattagttgtgccgatctgctttgtgctgaagcccacctaagtatttagcccaagaagcttcagtatataaggaagacttcaa 16207578  T
Q  206 gacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||||||| | ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  16207579 gacctaattgtttattcaagccatcatactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttgtatcgtttgtgatg 16207671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 20992210 - 20991910
Alignment:
Q  1 actgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatat 99  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  20992210 actgttgaatatttctaaagtagtatttatattttaggaaatatttgttattgggtggaacgatcctaaagatgttccgacattttaggactttccatat 20992111  T
Q  100 ttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||||  ||||||||||||||||| ||    
T  20992110 ttgtttatgattcttgttttgcagattagctgaaccgatctgctttgtgctgaagcccgactaatgtatttatcccaagttgcttcagtatataagggag 20992011  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  |||||||||| |||| |||| | |||||||    
T  20992010 acttcaagacctaattgatcattcaatccgtcatactaaaaagtttagatttttagggttttgagtctacatgtgctctactcttgtatcatttgtgatg 20991911  T
Q  299 c 299  Q
    |    
T  20991910 c 20991910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 2 - 266
Target Start/End: Complemental strand, 4459405 - 4459140
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |    
T  4459405 ctgtggaatatttctaaagtagattttatatttttggaaatatttgttattggttggaacgatcctataaatgtttcgacattttaggattttccataat 4459306  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||| |||||||| || |||||||||||||||| |||||| |||||||||  |||||    
T  4459305 tgtttctgatttctgttttgcagattagctgaaccgatctgctttgttctgaagcctaaataagtatttagcccaagctgctttagtatataaacaagac 4459206  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtct 266  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4459205 ttcaagacctaattgctcattcaagccgtcatactaaaaagtttagatttttagggttttgagtct 4459140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 12326478 - 12326179
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaa-cgatcctataaatgttccgacattttaggactttccatat 99  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||    
T  12326478 ctgtggaatatttctaaagtagtatttatattttagaaaatatttgttatttgttggaaacgatcctaaagatgttccgacattttaggactttccatat 12326379  T
Q  100 ttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||| |||||||||||| |||||| |||||||||||||||||||||| || ||||||||| ||||||||||||  ||||||||||||||||| |||    
T  12326378 ttgtttctaattcttgttttgaagattagctgaaccgatctgctttgtgctaaatcccaactaaatatttagcccaagatgcttcagtatataagggaga 12326279  T
Q  200 cttcaagacctaattga-tcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    ||| ||||||||||||| |||||||||  ||| ||||||||||||||| |||||||||||||||||| | ||||||||||||||| |||||| |||||||    
T  12326278 ctttaagacctaattgattcattcaagttgtcatactaaaaagtttaggtttttagggttttgagtc-tcatgtgctctattcttgtatcgtttgtgatg 12326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 25 - 299
Target Start/End: Complemental strand, 11999523 - 11999251
Alignment:
Q  25 tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcaga 124  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||  ||||||||||||||||    
T  11999523 tttatattttaggaaatatttattattggttggaacgatcctataaatgttctgacattttaggacttttcatttttgtttcatattcttgttttgcaga 11999424  T
Q  125 ttacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||    
T  11999423 ttagccgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaagctgcttcagtatataaggaagacttcaaaacctaattg-ttattcaa 11999325  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    | |||| | ||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  11999324 gtcgtcattctaaaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 11999251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 27 - 299
Target Start/End: Complemental strand, 11589105 - 11588832
Alignment:
Q  27 tatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagatt 126  Q
    |||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  11589105 tatattttagcaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttctaattcttgttttgcagatt 11589006  T
Q  127 ac-ctgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
    |  |||||||||||||||||||  |||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  11589005 aagctgaaccgatctgctttgttactgaagcccaacgaattatttagaccaagctgcttcagtatataaggaagacttcaagacctaattgttcattcaa 11588906  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  11588905 gccgtcttactaaaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 11588832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 4 - 259
Target Start/End: Complemental strand, 14165829 - 14165574
Alignment:
Q  4 gtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||| |||||||| |||||||||| |||||||||||||||||||||||   |||    
T  14165829 gtggaatatttctaaagtagatattatattttaggaaatatttatttttgtttggaacgctcctataaattttccgacattttaggactttccagcattg 14165730  T
Q  103 tttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| || ||||||||||||  |||||||||||| |||||||||||    
T  14165729 tttctgattcttgttttgcagattagctgaaccgatctgcattgtgttgaagcccaacgaattatttagcccaagttgcttcagtataaaaggaagactt 14165630  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    ||||||||||||| |||||||||||||| | || |||||||||||||||||||||||    
T  14165629 caagacctaattgttcattcaagccgtcattct-aaaagtttagatttttagggttt 14165574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 3 - 283
Target Start/End: Original strand, 29545635 - 29545912
Alignment:
Q  3 tgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||| || | ||||||||| | |||||||||||||||||||||||||||||||    
T  29545635 tgtggaatattcctaaagtagtatttatattttaggaaatatttgttattgttttggacgatcctaaagatgttccgacattttaggactttccatattt 29545734  T
Q  102 gtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||  |||||||||||||| ||||||||||||||||||| || |||||||||| || ||||| |||||| |||||||||||||||||| ||||    
T  29545735 gtttctgatttctgttttgcagattagctgaaccgatctgctttgttctaaagcccaactaaattatttggcccaagctgcttcagtatataagggagac 29545834  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattctt 283  Q
    ||||| ||||||||||||||     ||||| | ||||||||||||||||||||| |||||||||||  |||||||||| ||||    
T  29545835 ttcaaaacctaattgatcat-----ccgtcattctaaaaagtttagatttttagagttttgagtctacatgtgctctactctt 29545912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 3 - 299
Target Start/End: Original strand, 11520906 - 11521202
Alignment:
Q  3 tgtggaatatttctaaagta-gatttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    ||||||||||||||||| |  | ||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||    
T  11520906 tgtggaatatttctaaattgtgttttatattttaggaaatatttattattgtttggaacgatcctataaatgtttcgacattttaggactttccagattt 11521005  T
Q  102 gtttctgattcttgttttgcagat-tacctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||||||||||||||||||||||  | |||||||||||||| ||| | |||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  11521006 gtttctgattcttgttttgcagatcaagctgaaccgatctgcattgttactgaagcccaacgaattatttagcccaagctgcttcagtatataaggaaga 11521105  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||||| |||||||||||| | ||||||   ||| |||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  11521106 cttcaagacctaattgattattcaagccgtcattctaaaa--gttatatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 11521202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 4 - 299
Target Start/End: Complemental strand, 645800 - 645503
Alignment:
Q  4 gtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    ||||||||||||||||||  |||| ||||||||||||||||    ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||     
T  645800 gtggaatatttctaaagtgtattttatattttaggaaatatcgaatattgtttggaacgatcatataaatgttccgacattttaggactttccagattta 645701  T
Q  103 tttctgattcttgttttgcagattac-ctgaaccgatctgctttgtg-ctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    |||||||||||||||||||| ||||  |||||||| ||||| ||||  ||||||||||||  | |||||||||||| |||||||||||||||| ||||||    
T  645700 tttctgattcttgttttgcaaattaagctgaaccggtctgcattgttactgaagcccaacgtattatttagcccaagctgcttcagtatataaagaagac 645601  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||  | |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  645600 ttcaagacctaattctttattcaagccgtcatactaaaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 645503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 5 - 295
Target Start/End: Complemental strand, 15438739 - 15438469
Alignment:
Q  5 tggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| || |||||||||||||    
T  15438739 tggaatatttctaaagtatattttatattttaggaaatatttgttattggttg-aacgatcctataaatgtttcgacattttaagagtttccatatttgt 15438641  T
Q  104 ttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||||||||||||||||||||||||                    |||||||| ||| ||||||||||||| || |||||| |||||||||||||||||||    
T  15438640 ttctgattcttgttttgcagatta--------------------gctgaagcgcaattaagtatttagcctaagctgctttagtatataaggaagacttc 15438561  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtg 295  Q
    ||||||||||  || |||||| ||||| |||||||||||||||||||||||| ||||||||||  |||||||| |||||| |||||| ||||    
T  15438560 aagacctaataaattattcaacccgtcatactaaaaagtttagatttttaggattttgagtctacatgtgctccattcttgtatcgtttgtg 15438469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 110 - 299
Target Start/End: Complemental strand, 15506822 - 15506636
Alignment:
Q  110 ttcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacc 209  Q
    |||||||||||||||||| || ||||||| | |||| | |||||||  || |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15506822 ttcttgttttgcagattagctaaaccgattttctttttactgaagcgtaattaagtatttagcccaagctgcttcagtatataaggaagacttcaagacc 15506723  T
Q  210 taattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||| | |||||||||||| |||   |||||||||||||||||||||||||||||  |||||||  |||||| |||||| ||||||||    
T  15506722 taattgcttattcaagccgtcatac---aaagtttagatttttagggttttgagtctacatgtgcttcattcttgtatcgtttgtgatgc 15506636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 288
Target Start/End: Complemental strand, 16437416 - 16437154
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    |||||||||||||||||||||   ||| || | ||| ||||| | ||||||| | ||||||||||||||||||||||| | |||||| ||||||| ||||    
T  16437416 ttatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatattttaggactttccatatttgtctttgattcctgttttgtagat 16437317  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
     | ||| |  |||||| ||||| |||||||||| | | | |||||  |||   ||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  16437316 cagctggaa-gatctgttttgttctgaagcccagcaagaatatttgacccgtgctgcttcagtataaaaggaagacatcaagacctaattgattattcaa 16437218  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    ||| || | |||||||||||    |||||||||||| |||||| ||||| ||||||||| ||||    
T  16437217 gccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatc 16437154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 290
Target Start/End: Complemental strand, 14927244 - 14927025
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtattt 169  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| | ||| | ||||||| ||||| |||||||||||| | |  ||||    
T  14927244 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcagatcagctgga-cgatctgttttgttctgaagcccaacaagaccattt 14927146  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaatt-gatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
     |||||   |||||||||||| |||||||||||||||||||||||  || ||||| |   || | || |||||||||| |||||| ||||||||||| ||    
T  14927145 ggcccatattgcttcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaagtttag-tttttatggttttgagtcatt 14927047  T
Q  269 atgtgctctattcttatatcgt 290  Q
     |||| ||||||||| ||||||    
T  14927046 gtgtgttctattcttgtatcgt 14927025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 71 - 290
Target Start/End: Complemental strand, 15350710 - 15350491
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtattt 169  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| | ||| | ||||||| ||||| |||||||||||| | |  ||||    
T  15350710 atgttcctacattttaggactttccatatttgtctctgattcctgttttgcagatcagctgga-cgatctgttttgttctgaagcccaacaagaccattt 15350612  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaatt-gatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
     |||||   |||||||||||| |||||||||||||||||||||||  || ||||| |   || | || |||||||||| |||||| ||||||||||| ||    
T  15350611 ggcccatattgcttcagtataaaaggaagacttcaagacctaattatattattcatgttttcattctgaaaagtttag-tttttatggttttgagtcatt 15350513  T
Q  269 atgtgctctattcttatatcgt 290  Q
     |||| ||||||||| ||||||    
T  15350512 gtgtgttctattcttgtatcgt 15350491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 15506895 - 15506828
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctata 69  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  15506895 tgtggaatatttctaaagtatattttatattttaggaaatatttgttattggttggaacgatcctata 15506828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 71 - 230
Target Start/End: Complemental strand, 21261027 - 21260868
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||| ||| |||||||| |||||||| |||||||||||| || |||| |  ||||| ||||| | |||| ||||| |||||| | || |||     
T  21261027 atgttcctacatattatgactttccttatttgttactgattcttgttatgtagatcagttgaac-gatctacattgttctgaaacccaacaaggttattg 21260929  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    ||||||   ||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  21260928 agcccatattgcttcagtatataaggaagacttcaagacctaattattcattcaagtcgtc 21260868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 290
Target Start/End: Original strand, 26132600 - 26132706
Alignment:
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctatt 280  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||| | ||||||||| |||  |||||||||||||||||||| |||| |||| |    
T  26132600 cttcagtatataaggaagacttcaagacctaattaggtattcaagccgtcattctaaaaagtctag--ttttagggttttgagtctttgtgtg-tctact 26132696  T
Q  281 cttatatcgt 290  Q
    ||| ||||||    
T  26132697 cttgtatcgt 26132706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 6045916 - 6045746
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgc--tttgtgctgaagcccaactaagt-at 167  Q
    ||||||| |||| |||||||||||| |||||||   |||||||||||| | |||| | |||||| ||||| |  ||||| |||||||||||| | || ||    
T  6045916 atgttcctacatattaggactttccttatttgtcattgattcttgtttcgtagatcagctgaac-gatctacaatttgttctgaagcccaacaaggttat 6045818  T
Q  168 ttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaa 239  Q
    ||||||||   | |||||||||| |||||||||||||||||||||||    |||||||| ||| ||||||||    
T  6045817 ttagcccatatttcttcagtataaaaggaagacttcaagacctaattaggtattcaagctgtcatactaaaa 6045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 214
Target Start/End: Original strand, 23082338 - 23082481
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||| ||| |||||||| ||||||||  ||||||||||| || |||| |||||||| ||||| ||  || |||||||||||| | || | |     
T  23082338 atgttcctacatattacgactttccttatttgttagtgattcttgttatgtagatcacctgaac-gatctactaagttctgaagcccaacaaggttaata 23082436  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaatt 214  Q
    ||||||   |||||||||||||||||||||||| |||||||||||    
T  23082437 agcccatattgcttcagtatataaggaagacttgaagacctaatt 23082481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 265
Target Start/End: Original strand, 20924683 - 20924862
Alignment:
Q  84 ttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaag-tatttagcccaatctgct 182  Q
    |||||||||||| |||||||| ||||||| |||||||||||||| ||| | |||||| ||||||  ||||||||||  | | ||  | |||||   ||||    
T  20924683 ttaggactttccttatttgttactgattcgtgttttgcagattagctgga-cgatctactttgttatgaagcccaaacaggttaaatggcccatgttgct 20924781  T
Q  183 tcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    |||||||| ||| || ||||||||||||||||||  |||||||  ||| | ||||||||| |||   ||||||||||||||||    
T  20924782 tcagtataaaagaaatacttcaagacctaattgagaattcaagatgtcattctaaaaagtctag--ctttagggttttgagtc 20924862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 10661351 - 10661240
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtgctct 277  Q
    |||||||||||||||  || ||||||||||||||||  |||   ||||||||  ||||||||| ||||| ||||||||||||||||||||| |||| |||    
T  10661351 tgcttcagtatataaacaaaacttcaagacctaatttgtcaccgaagccgtcaaactaaaaaggtttag-tttttagggttttgagtctttgtgtgttct 10661253  T
Q  278 attcttatatcgt 290  Q
    | |||| ||||||    
T  10661252 actcttgtatcgt 10661240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 71 - 265
Target Start/End: Complemental strand, 23960622 - 23960431
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| || | |||||||||||| | ||||||  |||||| |||| || |||| | |||||| ||| ||| ||||||||||||||||| | || |||     
T  23960622 atgttcctacgtattaggactttcctt-tttgttaatgattcgtgttatgtagatcaactgaac-gatttgcattgtgctgaagcccaacaaggttattg 23960525  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    ||| ||   ||||||||||||||||||||| |||||||||||| |    |||||||||||| | ||  ||||  ||| ||||||||||||||||||    
T  23960524 agctcatattgcttcagtatataaggaagatttcaagacctaactaggtattcaagccgtcattct--aaagaatagttttttagggttttgagtc 23960431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 42636707 - 42636596
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtgctct 277  Q
    |||||||||||||||  |||| ||||||||||||||  |||   ||| ||||  ||||||||| ||||| ||||||||||||||||||||| |||| |||    
T  42636707 tgcttcagtatataaacaagatttcaagacctaatttgtcaccgaagtcgtcaaactaaaaaggtttag-tttttagggttttgagtctttgtgtgttct 42636609  T
Q  278 attcttatatcgt 290  Q
    | |||| ||||||    
T  42636608 actcttgtatcgt 42636596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 265
Target Start/End: Original strand, 7586094 - 7586286
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||||||||  |||| ||||||||||  |||||||||||  | |||| | |||| | ||||| |||| | |||||||||||  | || | |     
T  7586094 atgttcctacattttagttcttttcatatttgttattgattcttgttacgtagatcagctgagc-gatctactttattctgaagcccaagaaggttaatg 7586192  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    ||||||   ||||||||||||||||||||||||||||| ||||||    |||||||||||| | |||||| |  ||| ||||||||||||||||||    
T  7586193 agcccatattgcttcagtatataaggaagacttcaagatctaatttggtattcaagccgtcattctaaaa-gaatag-tttttagggttttgagtc 7586286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 288
Target Start/End: Complemental strand, 10280296 - 10280190
Alignment:
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctatt 280  Q
    |||||||||| ||||||||| ||||||||||||  |  |||||||||||  | |||||||||||||  ||||| |  |||||||||| ||||| ||||||    
T  10280296 cttcagtataaaaggaagacatcaagacctaatgtactattcaagccgttattctaaaaagtttag-cttttacgagtttgagtcttcatgtgttctatt 10280198  T
Q  281 cttatatc 288  Q
    ||| ||||    
T  10280197 cttgtatc 10280190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 10280495 - 10280400
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgc 121  Q
    |||||||||||||||||||||   ||| || | ||| ||||| | ||||||| |||||||||||||||| || ||||| ||| |||| ||||||||    
T  10280495 ttatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctacattttaggactttctatttttgtctctaattcctgttttgc 10280400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 10038407 - 10038485
Alignment:
Q  185 agtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    ||||||||||||||||||||||||||||||    |||||||||||| | |||||| |  ||| ||||||||||||||||||    
T  10038407 agtatataaggaagacttcaagacctaattaggtattcaagccgtcattctaaaa-gaatag-tttttagggttttgagtc 10038485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 71 - 265
Target Start/End: Complemental strand, 24902699 - 24902508
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attt 169  Q
    ||||||| |||| ||| |||||||| |||||||| |||||||||||| || |||| | |||||| ||||| | || | |||||||||||| | || |       
T  24902699 atgttcctacatattaagactttccttatttgttactgattcttgttatgtagatcagctgaac-gatctacatttt-ctgaagcccaacaaggttaacg 24902602  T
Q  170 agcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtc 265  Q
    | ||||   ||||| | |||||||||||||||||||| |||||||    |||||||||||| | |||||||  |||| ||||||||||||||||||    
T  24902601 atcccataatgctttaatatataaggaagacttcaaggcctaatttggtattcaagccgtcattctaaaaa-attag-tttttagggttttgagtc 24902508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 4547380 - 4547425
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgt 116  Q
    ||||||| ||||||||| |||||||||||||| | |||||||||||    
T  4547380 atgttcctacattttagaactttccatatttgctgctgattcttgt 4547425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 50
Target Start/End: Original strand, 16222075 - 16222115
Alignment:
Q  11 atttctaaagtagattt-atattttaggaaatatttgttat 50  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  16222075 atttctaaagtaggttttatattttaggaaatatttgttat 16222115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 193; Significance: 1e-105; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 299
Target Start/End: Original strand, 7034 - 7330
Alignment:
Q  5 tggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  7034 tggaatatttctaaagtagtatttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccaacattttaggactttccatatttgt 7133  T
Q  104 ttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    ||||| |||||||||| ||||||| | |||||||||| |||||| ||||||||||| | ||||||||||||| | |||||||||||||||||| ||||||    
T  7134 ttctggttcttgtttttcagattagccgaaccgatctactttgtactgaagcccaaataaagtatttagcccgagctgcttcagtatataagggagactt 7233  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||||||||||||| | | |||| ||||||||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  7234 caagacctaattgatcattcaagccgccattctaataagtttagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 7330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 5 - 299
Target Start/End: Original strand, 17621 - 17917
Alignment:
Q  5 tggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| | ||||||| ||||||||||||||| |||||||||    
T  17621 tggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagatgttccaacattttaggacttttcatatttgt 17720  T
Q  104 ttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    || |||||||||||||||||| || ||||||||||||||||||| | ||||||||||| || |||||||||||| |||||||||||||||||| ||||||    
T  17721 ttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgcttcagtatataagggagactt 17820  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||| || |||||||||||| |||| | |||||||||||||| ||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  17821 caagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 17917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 5 - 299
Target Start/End: Original strand, 27015 - 27311
Alignment:
Q  5 tggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||| | ||||||| ||||||||||||||| |||||||||    
T  27015 tggaatatttctaaagtagtatttatattttaggaaatattttttattggttggaatgatcctaaagatgttccaacattttaggacttttcatatttgt 27114  T
Q  104 ttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaact-aagtatttagcccaatctgcttcagtatataaggaagactt 202  Q
    || |||||||||||||||||| || ||||||||||||||||||| | ||||||||||| || |||||||||||| |||||||||||||||||| ||||||    
T  27115 ttatgattcttgttttgcagaatagctgaaccgatctgctttgtaccgaagcccaactaaactatttagcccaagctgcttcagtatataagggagactt 27214  T
Q  203 caagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||| || |||||||||||| |||| | |||||||||||||| ||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  27215 caagaccaaagtgatcattcaagtcgtcattctaaaaagtttagacttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 27311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 7 - 299
Target Start/End: Original strand, 16119 - 16412
Alignment:
Q  7 gaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||| | ||| |||||||||||||||    
T  16119 gaatatttctaaagtagatattatattttagaaaatatttgttattggttggaacgatcctaaagatgttccgacattctgggattttccatatttgttt 16218  T
Q  106 ctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaa 205  Q
    |||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||  |||||||     
T  16219 ctgattcttgttttgcagattagctgaactaatctgctttgtgctgaagcccaactaagtatttagcccaagatgcttcaatatataagggggacttcag 16318  T
Q  206 gacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||| | |  ||||||||||||||| |||||| ||||||||    
T  16319 gacctaattgttcattcaagccgtcatattaaaaagtttagatttttagggttttgaatttacatgtgctctattcttgtatcgtttgtgatgc 16412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 8072 - 8372
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttgga-acgatcctataaatgttccgacattttaggactttccatat 99  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||||||||||||||||    
T  8072 ctgtggaatacttctaaagtagtatttatattttaggaaatatttgttattggttggggacgatcctaaagatgttccgacattttaggactttccatat 8171  T
Q  100 ttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||| ||||| ||||| ||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||| ||    
T  8172 ttgtttatgattgttgttatgcagattagctgaaccgatctgctttgtgctaaagtccaactaaagtatttagcccaagctgcttcagtatataagggag 8271  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||||||||||||||||||||||||||| | | |||| | |||| | |||||||||||||||||||  |||||||||| |||| |||| | |||||||    
T  8272 acttcaagacctaattgatcattcaagccgacattctaagaggtttgggtttttagggttttgagtctacatgtgctctactcttttatcatttgtgatg 8371  T
Q  299 c 299  Q
    |    
T  8372 c 8372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 25171 - 25469
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||| |||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  25171 ctgttgaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatt 25270  T
Q  101 tgtttctgattcttgttttgcagattac-ctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||||||||||||||||||||||  |||||||||||||| || | |||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  25271 tgtttctgattcttgttttgcagattaagctgaaccgatctgcattttactgaagcccaacgaattatttagcccaagctgcttcagtatataaggaaga 25370  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||| |||||||||| ||||  |||| || | |||||| ||||||||    
T  25371 cttcaagacctaattgttcattcaagtcgtcatactaaaaaggttagatttttaggg-tttgagtcttcatgtattctactcgtgtatcgtttgtgatgc 25469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 15161977 - 15162276
Alignment:
Q  2 ctgtggaatatttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |   ||||| | |||  |||||||||||||||||||||||||    
T  15161977 ctgtggaatatttctaaagtagtatttatattttaggaaatatttgttattggttgggagattcctaaagatgacccgacattttaggactttccatatt 15162076  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaaga 199  Q
    | ||| |||||| ||||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||    
T  15162077 tttttatgattcatgttttgcaaattaactgaacctatctgctttgtgctgaagcccaactaaagtatttagcccaagctgcttcagtatataagggaga 15162176  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||||| ||||||||| || | ||||||||||||||||||||| ||||| |||||  |||||||||| |||| |||||| | ||||||    
T  15162177 cttcaagacctaattgattattcaagccatcattctaaaaagtttagatttttagagttttaagtctacatgtgctctactcttgtatcgtttatgatgc 15162276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 10724910 - 10724629
Alignment:
Q  13 ttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgatt 111  Q
    ||||||||||| |||||||||||||||||||||       |||||| | ||||||| | |||||| |||||||||||||||||||||||||||| |||||    
T  10724910 ttctaaagtagtatttatattttaggaaatatt-------ggttgggatgatcctaaagatgttctgacattttaggactttccatatttgtttttgatt 10724818  T
Q  112 cttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaagacttcaagacct 210  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||    
T  10724817 cttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaactaaagtatttagcccaagttgcttcagtatataagggagacttcaagacct 10724718  T
Q  211 aattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||| |||||||| | || |||||| |||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  10724717 aattgatcatttaagccgtcattctgaaaagtgtagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 10724629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 13 - 299
Target Start/End: Complemental strand, 10938679 - 10938398
Alignment:
Q  13 ttctaaagtag-atttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgatt 111  Q
    ||||||||||| |||||||||||||||||||||       |||||| | ||||||| | |||||| |||||||||||||||||||||||||||| |||||    
T  10938679 ttctaaagtagtatttatattttaggaaatatt-------ggttgggatgatcctaaagatgttctgacattttaggactttccatatttgtttttgatt 10938587  T
Q  112 cttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaa-gtatttagcccaatctgcttcagtatataaggaagacttcaagacct 210  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||||||||| ||||||||||||||    
T  10938586 cttgttttgcagattagctgaaccgatctgctttgtgccgaagcccaactaaagtatttagcccaagttgcttcagtatataagggagacttcaagacct 10938487  T
Q  211 aattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||| |||||||| | || |||||| |||||||||||||||||||||||  |||||||||| |||| |||||| ||||||||    
T  10938486 aattgatcatttaagccgtcattctgaaaagtgtagatttttagggttttgagtctacatgtgctctactcttgtatcgtttgtgatgc 10938398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 3 - 259
Target Start/End: Complemental strand, 16384555 - 16384298
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  16384555 tgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaatgttccaacattttaggacttcccaaattt 16384456  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||||||||||||||||||||||| | |||||||||||||| |  |||||||||||||  || |||||||||||| |||||| |||||||||| || ||    
T  16384455 gtttctgattcttgttttgcagattaagctgaaccgatctgcatcttgctgaagcccaatgaattatttagcccaagctgctttagtatataagaaatac 16384356  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    ||||||||||||||||| ||||||||| || | || |||||||||||||||||||||||    
T  16384355 ttcaagacctaattgattattcaagccatcattct-aaaagtttagatttttagggttt 16384298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 18601153 - 18601449
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||| ||||||||||||||  |||| ||| |||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||||||||    
T  18601153 ctgtgaaatatttctaaagtgtattttatactttaggaaatatttattatagtttgaaacgatcctataaatgttccgacattttaggactttccatatt 18601252  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||| |||||||||||||||||||| | ||||| |||||||| ||||||||||||||||| || ||| |||||||| ||||||||||||||||| ||||    
T  18601253 tgtttatgattcttgttttgcagattaagctgaatcgatctgcattgtgctgaagcccaacgaattatgtagcccaagctgcttcagtatataagaaaga 18601352  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||| ||||||  |||||||||||||| | ||||||   |||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  18601353 cttcaagaactaattattcattcaagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 18601449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 272
Target Start/End: Original strand, 33898502 - 33898771
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  33898502 ctgtggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactttccagatt 33898601  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||| |||||||||||||||||||| | |||||| ||||||| || | |||||| ||||| || |||||||||||| |||||||| |||||||||||||    
T  33898602 tgtttatgattcttgttttgcagattaagctgaactgatctgcattttactgaagtccaacgaattatttagcccaaactgcttcactatataaggaaga 33898701  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    | |||||||||||||| |||||||||| ||| | ||||||   ||||||||||| || |||||||||| ||||    
T  33898702 cgtcaagacctaattgttcattcaagctgtcattctaaaa--gttagattttta-ggatttgagtcttcatgt 33898771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 23399689 - 23399986
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||| |||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||||||||||| |||    
T  23399689 ctgtagaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttctgacattttaggactttccaaatt 23399788  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||||||||||||||||||||||| | |||||||||||||| ||| |  |||||||||||  | ||||||||| ||  ||||||||||||||||||||    
T  23399789 tgtttctgattcttgttttgcagattaagctgaaccgatctgcattgttagtgaagcccaacatattatttagcctaagttgcttcagtatataaggaag 23399888  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    ||||||||||||||||| |||||||| | ||| | ||||||  ||||||||||||||| || ||||||| ||||  |||  |||| |||||| |||||||    
T  23399889 acttcaagacctaattgttcattcaaactgtcattctaaaa--tttagatttttaggg-ttcgagtcttcatgtattctgctcttgtatcgtttgtgatg 23399985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 8 - 272
Target Start/End: Complemental strand, 28019963 - 28019699
Alignment:
Q  8 aatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttc 106  Q
    ||||||||||||||  |||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  28019963 aatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggacttttcagatttgtttc 28019864  T
Q  107 tgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttca 204  Q
    |||||||||||||||||||| | || ||||||||| | ||| |  ||||||||||| || ||||||||||||  ||||||||||||||||||||||||||    
T  28019863 tgattcttgttttgcagattaagctaaaccgatctacattgttattgaagcccaacgaattatttagcccaagttgcttcagtatataaggaagacttca 28019764  T
Q  205 agacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    ||||||||||| | |||||||||||| | ||||||   |||||||||||||| |||||||||| ||||    
T  28019763 agacctaattgtttattcaagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgt 28019699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 5 - 272
Target Start/End: Complemental strand, 25117519 - 25117252
Alignment:
Q  5 tggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    |||||||||||||||||  |||| |||||||| |||||| ||  ||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25117519 tggaatatttctaaagtgtattttatattttaagaaatacttaatattttttggaacgatcctataaatgttccgacattttaggactttccagatttgt 25117420  T
Q  104 ttctgattcttgttttgcagatt-acctgaaccgatctgc-tttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    ||||||||||||||||||| ||| | |||||||||||||| ||| | ||||||||||||  | |||||||||||| ||||||||||||||||||||||||    
T  25117419 ttctgattcttgttttgcaaattaagctgaaccgatctgcatttttactgaagcccaacgtattatttagcccaagctgcttcagtatataaggaagact 25117320  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||| | ||||||||| || | ||||||   |||||||||||||| |||||||||| ||||    
T  25117319 tcaagacctaattgttaattcaagccatcattctaaaa--gttagatttttaggg-tttgagtcttcatgt 25117252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 28 - 288
Target Start/End: Original strand, 15699856 - 15700115
Alignment:
Q  28 atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagatta 127  Q
    |||||||||||||||||||   ||| || | ||| ||||| | ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  15699856 atattttaggaaatatttgaagttgttttggacgctcctaaagatgttcctacattttaggactttccatatttgtctctgattcttgttttgcagatca 15699955  T
Q  128 cctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagc 226  Q
     ||| | ||||||| ||||| |||||||||||| | |||||||  ||| | |||||||||||||||||| | |||||||||||||||  | ||||||| |    
T  15699956 gctgga-cgatctgttttgttctgaagcccaacaagagtatttgacccgagctgcttcagtatataagggaaacttcaagacctaatgaaccattcaatc 15700054  T
Q  227 cgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
     ||| | |||||||||||||  ||||||||||||||||||  ||||| ||||||||| ||||    
T  15700055 tgtcattctaaaaagtttag-cttttagggttttgagtctacatgtgttctattcttgtatc 15700115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 179 - 290
Target Start/End: Original strand, 19183355 - 19183465
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctcta 278  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||| |||| | ||||||||||||| ||| |||||||||| |||||| |||| ||||    
T  19183355 tgcttcagtatgaaaggaagacatcaagacctaattgatcattcaagacgtcattctaaaaagtttag-tttgtagggttttgtgtctttgtgtgttcta 19183453  T
Q  279 ttcttatatcgt 290  Q
    ||||| ||||||    
T  19183454 ttcttgtatcgt 19183465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 264
Target Start/End: Complemental strand, 32862230 - 32862050
Alignment:
Q  82 ttttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-atttagcccaatctg 180  Q
    ||||||||||||||||||||||| ||||||||||||  | | || | |||||| ||||| | |||| |||||||| ||| |||| ||| ||||||   ||    
T  32862230 ttttaggactttccatatttgttactgattcttgttacgtaaatcagctgaac-gatctacattgttctgaagcc-aacaaagttattaagcccatattg 32862133  T
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagt 264  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||| |   ||||||  ||| |||||||||||||||||    
T  32862132 cttcaggatataaggaagacttcaagacctaattgttcattcaagccgtcatttcaaaaagaatag-tttttagggttttgagt 32862050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 173 - 299
Target Start/End: Complemental strand, 10191379 - 10191255
Alignment:
Q  173 ccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||| |||||||| ||||||||||||||||||||||||||||  |||||||||||||| | || |||||||||||||||||||| |||||||||| ||||    
T  10191379 ccaagctgcttcactatataaggaagacttcaagacctaattattcattcaagccgtcattct-aaaagtttagatttttaggg-tttgagtcttcatgt 10191282  T
Q  273 gctctattcttatatcgtctgtgatgc 299  Q
      |||  |||| |||||| ||||||||    
T  10191281 attctgctcttgtatcgtttgtgatgc 10191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 15622924 - 15622815
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcg-tactaaaaagtttagatttttagggttttgagtctttatgtgctct 277  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||||| | |||||||||||||  |||||||||||||||||||| |||| |||    
T  15622924 tgcttcagtataaaaggaggacttcaagacctaattgattattcaagccgtcgtttctaaaaagtttag--ttttagggttttgagtctttgtgtg-tct 15622828  T
Q  278 attcttatatcgt 290  Q
    | |||| ||||||    
T  15622827 actcttgtatcgt 15622815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 192 - 283
Target Start/End: Complemental strand, 19659913 - 19659823
Alignment:
Q  192 aaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattctt 283  Q
    |||||||||||||||||||||||    |||||||||||| | ||||||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  19659913 aaggaagacttcaagacctaattatgtattcaagccgtcattctaaaaagtttag-tttttagggttttgagtctttgtgtgttctactctt 19659823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 179 - 273
Target Start/End: Complemental strand, 33746406 - 33746312
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtg 273  Q
    ||||||||||||||   |||||||||||||||||||  ||||||||||||||  ||||||||| ||||| |||||| |||||||||||||| ||||    
T  33746406 tgcttcagtatatattcaagacttcaagacctaattattcattcaagccgtcaaactaaaaaggtttag-tttttaaggttttgagtctttgtgtg 33746312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 72 - 214
Target Start/End: Complemental strand, 41786029 - 41785887
Alignment:
Q  72 tgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-attta 170  Q
    |||||| ||||||||  |||||| ||||||||| ||||||||||||    |||| | |||||  ||||| | |||| |||||||||| | |||| |||||    
T  41786029 tgttcctacattttataactttctatatttgttactgattcttgttacatagatcatctgaag-gatcttcattgttctgaagcccagcaaagttattta 41785931  T
Q  171 gcccaatctgcttcagtatataaggaagacttcaagacctaatt 214  Q
    |||||   |||||||| |||||||||||||||||||||||||||    
T  41785930 gcccatgttgcttcagaatataaggaagacttcaagacctaatt 41785887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 9069431 - 9069322
Alignment:
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaag-tttagatttttagggttttgagtctttatgtgctctat 279  Q
    ||||| |||||||  |||||||||||||||||||  |||   ||||||||  ||||||||| ||||| ||||||||||||||||||||| || | ||||     
T  9069431 cttcaatatataaacaagacttcaagacctaatttgtcaccgaagccgtcaaactaaaaaggtttag-tttttagggttttgagtctttgtgcgttctac 9069333  T
Q  280 tcttatatcgt 290  Q
    |||| ||||||    
T  9069332 tcttgtatcgt 9069322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 15687382 - 15687433
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtc 230  Q
    ||||||||||| |||  |||||| |||||||||||| |||||||||||||||    
T  15687382 tgcttcagtatctaaacaagactgcaagacctaattcatcattcaagccgtc 15687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 19660031 - 19659983
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgtttt 119  Q
    ||||||| || |||||||||||||| |||||||| ||||||| ||||||    
T  19660031 atgttcctactttttaggactttccttatttgttactgattcatgtttt 19659983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 168; Significance: 5e-90; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 1861 - 2158
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||| ||||||  |||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | |||    
T  1861 ctgtggaatatttataaagtgtattttatatttttggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactttctagatt 1960  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  1961 tgtttctgattcttgttttgcagattaagctgaaccgatatgctttgtgctgaagcccaacaaattatttagcccaaactgcttcagtatataaggaaga 2060  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    |||||||||||||||||| |||||||||||| | || ||||||||||||||| | || |||||||||| ||||  |||  |||| |||||| ||||||||    
T  2061 cttcaagacctaattgattattcaagccgtcattct-aaaagtttagattttcaagg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 2158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 168; Significance: 5e-90; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 12911158 - 12910861
Alignment:
Q  2 ctgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||| ||||||||||||||  || |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  12911158 ctgtgaaatatttctaaagtgtatcttatattttaggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactttccagatt 12911059  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||||||||| |||||||||||||| | |||||||||||||| ||||||||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  12911058 tgtttctgatttttgttttgcagattaagctgaaccgatctgcattgtgctgaagcccaacgaattatttagcccaaactgcttcagtatataaggaaga 12910959  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
     ||||||||||||||| | |||||||||||| |  | |||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  12910958 tttcaagacctaattgtttattcaagccgtcattat-aaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 12910861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 299
Target Start/End: Original strand, 24789652 - 24789950
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    |||||||||||| |||||||  |||| ||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  24789652 ctgtggaatattactaaagtgtattttatattttaggaaaaatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatt 24789751  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    |||||||||||||||||||||||||| | ||||| | || ||| ||| | ||||||||||||  | |||||||||||| ||||||||||||||||| |||    
T  24789752 tgtttctgattcttgttttgcagattaagctgaatccatttgcattgttactgaagcccaacatattatttagcccaagctgcttcagtatataagtaag 24789851  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    ||||||||||||||||| |||||||||||||| | || |||||||||||||||||||| ||||||||||  |||  |||| |||| |||||| |||||||    
T  24789852 acttcaagacctaattgttcattcaagccgtcattct-aaaagtttagatttttaggg-tttgagtcttcgtgtattctactcttgtatcgtttgtgatg 24789949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 5 - 272
Target Start/End: Complemental strand, 22611554 - 22611287
Alignment:
Q  5 tggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgt 103  Q
    |||||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  22611554 tggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcttataaatgttccgacattttaggactttccaaatttgt 22611455  T
Q  104 ttctgattcttgttttgcagatt-acctgaaccgatctgc-tttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagact 201  Q
    || |||||||||||||||||||| | |||||||||||||| ||| | ||||||||||||  | ||||||||||||  |||||||||||||||||||||||    
T  22611454 ttatgattcttgttttgcagattaagctgaaccgatctgcatttttactgaagcccaacgtattatttagcccaaggtgcttcagtatataaggaagact 22611355  T
Q  202 tcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgt 272  Q
    |||||||||||||| || ||||||||||| | ||||||   ||||||||||| || |||||||||| ||||    
T  22611354 tcaagacctaattgttccttcaagccgtcattctaaaa--gttagatttttacgg-tttgagtcttcatgt 22611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 299
Target Start/End: Complemental strand, 23759285 - 23758993
Alignment:
Q  7 gaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgttt 105  Q
    |||||||||||||||  |||| ||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  23759285 gaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccaacattttaggactttctagatttgttt 23759186  T
Q  106 ctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttc 203  Q
    ||||||||||||||| ||||| | ||||| |||||||| ||| | ||||||||||||  | |||||||||||| ||||||||||| |||  ||||| ||     
T  23759185 ctgattcttgttttgtagattaagctgaaacgatctgcattgttactgaagcccaacgtattatttagcccaagctgcttcagtacatatagaagagttg 23759086  T
Q  204 aagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||  ||||||||||||| | ||||||   |||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  23759085 aagacctaattgcacattcaagccgtcattctaaaa--gttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 23758993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 74 - 268
Target Start/End: Complemental strand, 15328918 - 15328721
Alignment:
Q  74 ttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagc 172  Q
    |||| |||||||| || |||||||||||||  ||||||| |||||||||||| | ||| || |||||| ||||| |||||||||||| | | |||||  |    
T  15328918 ttcctacattttaagattttccatatttgtccctgattcctgttttgcagatcagctggac-gatctgttttgttctgaagcccaacaagaatatttgac 15328820  T
Q  173 ccaatctgcttcagtatataaggaagacttcaagacctaattga----tcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
    || | ||||||||||||| ||||||||| |||||||||||||||    |||||||| ||||| | ||||||||||||| |||||||||||||||||||||    
T  15328819 ccgagctgcttcagtataaaaggaagacatcaagacctaattgattattcattcaacccgtcattctaaaaagtttag-tttttagggttttgagtcttt 15328721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 21530867 - 21530766
Alignment:
Q  181 cttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctatt 280  Q
    |||||||||| |||||||||||||||||||||||||  |||||||| ||| | ||||||||||||| ||||||||||||||||| ||| |||| |||| |    
T  21530867 cttcagtataaaaggaagacttcaagacctaattgaatattcaagctgtcattctaaaaagtttag-tttttagggttttgagtttttgtgtgttctact 21530769  T
Q  281 ctt 283  Q
    |||    
T  21530768 ctt 21530766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 268
Target Start/End: Complemental strand, 19445088 - 19445000
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatc-attcaagccgtcgtactaaaaagtttagatttttagggttttgagtcttt 268  Q
    |||||||||||| ||||||||||||||||||||||| ||| |||| ||||||| | ||||||||||||| |||||||||||||||||||||    
T  19445088 tgcttcagtataaaaggaagacttcaagacctaatt-atctattctagccgtcattctaaaaagtttag-tttttagggttttgagtcttt 19445000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 214
Target Start/End: Original strand, 21249773 - 21249903
Alignment:
Q  84 ttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagt-atttagcccaatctgct 182  Q
    |||||||||| | |||||||| ||||||| |||| || |||| | |||||| ||||| |||||| ||||| |||||| | || | ||||||||   | ||    
T  21249773 ttaggacttttcttatttgttactgattcgtgttatgtagatcagctgaac-gatctactttgttctgaaacccaacaaggttaattagcccatatttct 21249871  T
Q  183 tcagtatataaggaagacttcaagacctaatt 214  Q
    ||| ||| ||||||||||||||||||||||||    
T  21249872 tcaatatgtaaggaagacttcaagacctaatt 21249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 19466225 - 19466280
Alignment:
Q  208 cctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagt 264  Q
    ||||||||||||||||||||||| | ||||||||| |||  ||||||||||||||||    
T  19466225 cctaattgatcattcaagccgtcattctaaaaagtctag-cttttagggttttgagt 19466280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 299
Target Start/End: Complemental strand, 37256 - 36960
Alignment:
Q  2 ctgtggaatatttctaaagtagat-ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||   ||| |||  ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| |||    
T  37256 ctgtggaatatttctaaaaatgatattagtttttaggaaatatttattattgtttggaacgatcctataaatgttccgacattttaggactgtccagatt 37157  T
Q  101 tgtttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagac 200  Q
    ||||| |||||||||||||||||| || |||||||||| ||||||||||||| ||||||| || |||||||||||  || ||| ||| || |||||||||    
T  37156 tgtttatgattcttgttttgcagactagctgaaccgatttgctttgtgctgaggcccaacgaattatttagcccatgctactttagtctagaaggaagac 37057  T
Q  201 ttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||||||||||||| |||||||||| ||| | || |||||||||||||||||||| |||||||||| ||||  |||  |||| |||||| ||||||||    
T  37056 ttcaagacctaattgttcattcaagctgtcattct-aaaagtttagatttttaggg-tttgagtcttcatgtattctgctcttgtatcgtttgtgatgc 36960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 143; Significance: 4e-75; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 3 - 298
Target Start/End: Original strand, 109753 - 110049
Alignment:
Q  3 tgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatattt 101  Q
    |||||||||||||||||||  |||| ||||||||||||||||||  | ||| |||||||||||||||||||||||  |||||||||||||||||| ||||    
T  109753 tgtggaatatttctaaagtgtattttatattttaggaaatatttaattttgtttggaacgatcctataaatgttctaacattttaggactttccagattt 109852  T
Q  102 gtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaaga 199  Q
    ||||||||||||||||||||||||| | ||||||| || ||| ||| | |||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  109853 gtttctgattcttgttttgcagattaagctgaaccaatatgcattgttactgaagcccaacgaattatttagcccaagctgcttcagtatataaggaaga 109952  T
Q  200 cttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatg 298  Q
    |||||||||||||||| |||||||| ||||| | || ||||||||||||| |||||| |||||||||| ||||  ||| || || |||||| |||||||    
T  109953 cttcaagacctaattgttcattcaaaccgtcattct-aaaagtttagattattaggg-tttgagtcttcatgtattctgtttttgtatcgtttgtgatg 110049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 46 - 266
Target Start/End: Complemental strand, 6528 - 6308
Alignment:
Q  46 gttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagattacctgaaccgatctgcttt 145  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| || |||||||| ||| |   ||||||||||||| |||||||||||||||||    
T  6528 gttattggctggaacgatcctataattgttccgacattttaggacttttcagatttgtttatgaattcagttttgcagattagctgaaccgatctgcttt 6429  T
Q  146 gtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagttta 245  Q
    || || ||||||||| ||||||||||||||| ||||||||||||| ||  |||||||||||||||||||| ||||| |||||||| ||||||||| ||||    
T  6428 gtactaaagcccaacgaagtatttagcccaagctgcttcagtataaaaacaagacttcaagacctaattgctcatttaagccgtcatactaaaaaattta 6329  T
Q  246 gatttttagggttttgagtct 266  Q
    |||||||||||||||||||||    
T  6328 gatttttagggttttgagtct 6308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 9340 - 9289
Alignment:
Q  2 ctgtggaatatttctaaagtagattt-atattttaggaaatatttgttattg 52  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9340 ctgtggaatatttctaaagtagattttatattttaggaaatatttgttattg 9289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 159738 - 159484
Alignment:
Q  1 actgtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatat 99  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||    
T  159738 actgtggaatatttctaaagtgtattttatattttaggaaatatttaatattgtttggaacgatcctataaatgttctgacattttaggtctttccagat 159639  T
Q  100 ttgtttctgattcttgttttgcagatt-acctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaag 198  Q
    ||||||||||||||||||||||||||| | | |||||||||||| || | |||||||||||| || ||||||||||||  |||||||||| |||| ||||    
T  159638 ttgtttctgattcttgttttgcagattaagccgaaccgatctgcattttactgaagcccaacgaattatttagcccaagttgcttcagtacataaagaag 159539  T
Q  199 acttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagg 255  Q
    |||||||||||||||||  ||||||||||||| | ||||||   |||||||||||||    
T  159538 acttcaagacctaattgtccattcaagccgtcattctaaaa--gttagatttttagg 159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 126; Significance: 5e-65; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 16821 - 16994
Alignment:
Q  4 gtggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttg 102  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||    
T  16821 gtggaatatttctaaagtagattttatattttaggaaatatttgttattggttggaacgatcctaaagatgttccgacattttaggacttttcatatttg 16920  T
Q  103 tttctgattcttgttttgcagattacctgaaccgatctgctttgtgctgaagcccaactaagtatttagcccaa 176  Q
    |||||||||  ||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||| |||||    
T  16921 tttctgatttctgtttcgcagattagctgaaccgatctgctttgtgctgaagtccaaataagtatttaacccaa 16994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 16992 - 17069
Alignment:
Q  222 caagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatcgtctgtgatgc 299  Q
    ||||| ||| ||||||||||||||||||| | || ||||||||||||||||||| ||||||| |||||| ||||||||    
T  16992 caagctgtcatactaaaaagtttagatttattggtttttgagtctttatgtgctttattcttgtatcgtttgtgatgc 17069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 25 - 227
Target Start/End: Original strand, 47909 - 48113
Alignment:
Q  25 tttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcaga 124  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  47909 tttatattttaggaaatatttaatattgtttggaacgatcctataaatgttccgacattttaggactttccagatttgtttttgattcttgttttgcata 48008  T
Q  125 tt-acctgaaccgatctgctttg-tgctgaagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattc 222  Q
    || | |||||||||| |||  || | ||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  48009 ttaagctgaaccgatttgcactgttactgaagcccaacgtattatttagcccaagctgcttcagtatataaggaagacttcaagacctaattgattattc 48108  T
Q  223 aagcc 227  Q
    |||||    
T  48109 aagcc 48113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 259
Target Start/End: Original strand, 356841 - 357046
Alignment:
Q  54 ttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagatt-acctgaaccgatctgctttg-tgctg 151  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| | |||||||||||||| ||| | |||    
T  356841 ttggaacgatcctataaatgttccgacattttaggattttccagatttgtttctgattcttgttttgaagattaagctgaaccgatctgcattgttactg 356940  T
Q  152 aagcccaactaagtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttt 251  Q
    ||||||| | || |||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||   |||||||||    
T  356941 aagcccatcaaattatttagcccaagctgctttagtatataaggaagacttcaaaacctaattgattattcaagccgtcattctaaaa--gttagatttt 357038  T
Q  252 tagggttt 259  Q
    ||||||||    
T  357039 tagggttt 357046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 2556 - 2414
Alignment:
Q  2 ctgtggaatatttctaaagtagatt-tatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatt 100  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||  |||    
T  2556 ctgtggaatatttctaaagtgtattatatattttaggaaatatttattattgtttggaacgatcctatagatgttccgacattttaggactttcctgatt 2457  T
Q  101 tgtttctgattcttgttttgcagatt-acctgaaccgatctgc 142  Q
    ||||||||||||||| ||||||| || | ||||||||||||||    
T  2456 tgtttctgattcttgctttgcaggttaagctgaaccgatctgc 2414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 2398 - 2327
Alignment:
Q  187 tatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttt 259  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | || |||||||||||||||||||||||    
T  2398 tatataaggaagacttcaagacctaattgttcattcaagccgtcattct-aaaagtttagatttttagggttt 2327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 288
Target Start/End: Complemental strand, 27046 - 26784
Alignment:
Q  26 ttatattttaggaaatatttgttattggttggaacgatcctataaatgttccgacattttaggactttccatatttgtttctgattcttgttttgcagat 125  Q
    |||||||||||||||||||||   ||| || | ||| ||||| | ||||||| | ||||||||||||||||||||||| | |||||| ||||||| ||||    
T  27046 ttatattttaggaaatatttgaagttgttttggacgttcctaaagatgttcctatattttaggactttccatatttgtctttgattcctgttttgtagat 26947  T
Q  126 tacctgaaccgatctgctttgtgctgaagcccaacta-agtatttagcccaatctgcttcagtatataaggaagacttcaagacctaattgatcattcaa 224  Q
     | ||| |  |||||| ||||| |||||||||| | | | |||||  |||   ||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  26946 cagctggaa-gatctgttttgttctgaagcccagcaagaatatttgacccgtgctgcttcagtataaaaggaagacatcaagacctaattgattattcaa 26848  T
Q  225 gccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctctattcttatatc 288  Q
    ||| || | |||||||||||    |||||||||||| |||||| ||||| ||||||||| ||||    
T  26847 gccatcattctaaaaagttttagcttttagggttttaagtcttcatgtgttctattcttgtatc 26784  T

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Target: scaffold0020 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 179 - 299
Target Start/End: Original strand, 12183 - 12301
Alignment:
Q  179 tgcttcagtatataaggaagacttcaagacctaattgatcattcaagccgtcgtactaaaaagtttagatttttagggttttgagtctttatgtgctcta 278  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||   || |||||||||||||||||||| |||||||||| ||||  |||     
T  12183 tgcttcagtatataaggaagacttcaagacctaattgctcattcaagtcgtcactct-aaaagtttagatttttaggg-tttgagtcttcatgtattctg 12280  T
Q  279 ttcttatatcgtctgtgatgc 299  Q
     |||| |||||| ||||||||    
T  12281 ctcttgtatcgtttgtgatgc 12301  T

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Target: scaffold0480 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 11777 - 11732
Alignment:
Q  71 atgttccgacattttaggactttccatatttgtttctgattcttgt 116  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||    
T  11777 atgttcctacattttaggactttccatatttgttgctgattcttgt 11732  T

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Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 16168 - 16109
Alignment:
Q  5 tggaatatttctaaagtagattt-atattttaggaaatatttgttattggttggaacgat 63  Q
    |||||||||||||||||  |||| |||||||||||||||||| |||||| ||||||||||    
T  16168 tggaatatttctaaagtgtattttatattttaggaaatatttattattgtttggaacgat 16109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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