View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4987_high_3 (Length: 377)
Name: NF4987_high_3
Description: NF4987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4987_high_3 |
 | |
|
| [»] scaffold0130 (1 HSPs) |
| | |
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| [»] scaffold0016 (2 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
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| [»] scaffold0319 (1 HSPs) |
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| [»] scaffold0040 (1 HSPs) |
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| [»] scaffold0108 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0241 (1 HSPs) |
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| [»] scaffold0282 (1 HSPs) |
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| [»] scaffold0005 (1 HSPs) |
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| [»] scaffold0001 (1 HSPs) |
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| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0656 (1 HSPs) |
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| [»] scaffold0362 (1 HSPs) |
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| [»] scaffold0051 (1 HSPs) |
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| [»] scaffold0019 (2 HSPs) |
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| [»] scaffold0046 (1 HSPs) |
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| [»] scaffold0107 (2 HSPs) |
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| [»] scaffold0023 (2 HSPs) |
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| [»] scaffold0013 (4 HSPs) |
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| [»] scaffold0053 (1 HSPs) |
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| [»] scaffold0029 (1 HSPs) |
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| [»] scaffold0008 (1 HSPs) |
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| [»] scaffold0423 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 14 - 346
Target Start/End: Complemental strand, 22638649 - 22638316
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22638649 |
aagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacgaa |
22638550 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
22638549 |
atcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagatccagtg |
22638450 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
22638449 |
aaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcga |
22638350 |
T |
|
| Q |
313 |
acacagctttctgcttaccctctgttttgtcaac |
346 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| |
|
|
| T |
22638349 |
acacagccttctgcttaccctctgttttatcaac |
22638316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 8 - 358
Target Start/End: Original strand, 23200486 - 23200837
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
23200486 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggtttgtgagttgccatttcatc |
23200585 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||| |
|
|
| T |
23200586 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagat |
23200685 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
|| |||||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23200686 |
cccgtgaaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
23200785 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23200786 |
tttcgaacacagccttctgcttaccctctgttttgtcaacattggtgatgtc |
23200837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 8 - 358
Target Start/End: Original strand, 23626115 - 23626466
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||||| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
23626115 |
tcatcgaagtgtttgatttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagcggcttgtgagttgccatttcatc |
23626214 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23626215 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccggtaggatagaaaccacattgcacactatgtcgagactagggtcagat |
23626314 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
23626315 |
ccagtgaaattcgaagtcatttctacatcctccttgggatgatcttttttcaatattgacaatgggggcgagattctctctgttgctggtttcttaacca |
23626414 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23626415 |
ttttgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
23626466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 328
Target Start/End: Complemental strand, 24912223 - 24911914
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| | |||||||| || ||||| |||| |
|
|
| T |
24912223 |
tctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgcgtcgccatttcgtcaacgaagtcac |
24912124 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||| | ||| |||| |||| ||||||||||||||||||| ||| || || |||||||| || |||||||||||||| |||||||||||||||||||| |
|
|
| T |
24912123 |
tttcaacttcattaacttctgactgaacgtcgtattccacagatagaattgataccacattgcatactatgtcgagactggggtcagatccagtgaaatt |
24912024 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
317 |
Q |
| |
|
|||||||||||| |||||||| |||||||| || ||||| ||||||||||| ||||| || ||||||| ||||||||||| |||||||||||||| ||| |
|
|
| T |
24912023 |
tgaagtcatttcttcatcctctttgggatggtccttctttaagattgacaa-gggggtgaaattctctttgttgctggttttttaaccatttcgaaaaca |
24911925 |
T |
|
| Q |
318 |
gctttctgctt |
328 |
Q |
| |
|
||| ||||||| |
|
|
| T |
24911924 |
gctctctgctt |
24911914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 23813889 - 23813973
Alignment:
| Q |
40 |
tgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttcca |
124 |
Q |
| |
|
||||| ||||| |||||||||| ||||| ||||| ||||||| |||||| | ||| |||||||||||| ||| |||||||||| |
|
|
| T |
23813889 |
tgttgatcttcgacacaaccattgttcataacatagtagcataatggcttctaaatagccatttcatcggtgaattcactttcca |
23813973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0130 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: scaffold0130
Description:
Target: scaffold0130; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 358
Target Start/End: Complemental strand, 43482 - 43131
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||| || |||||||||| |
|
|
| T |
43482 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagcgccttgtgagtttccatttcatc |
43383 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |
|
|
| T |
43382 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaggatagaaaccacattgcacactatgtcgagactagggtcagat |
43283 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
|| |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
43282 |
cccgtgaaattcgaagtcagttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaacca |
43183 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||| |||||||||||||||||||||||||||||| ||||| ||| ||||||| |
|
|
| T |
43182 |
ttttgaacacagctttctgcttaccctctgttttatcaacattggtgatgtc |
43131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 14 - 346
Target Start/End: Original strand, 18171497 - 18171830
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18171497 |
aagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacgaa |
18171596 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
|||||||| || ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18171597 |
atcactttgcacttcgttaatttctgactgaacgttgtattccaccagtaggatagaaaccacattgtacactatgtcgagactagggtcagatccagtg |
18171696 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||||| |
|
|
| T |
18171697 |
aaattcgaagtcatttcttcatcctccttgggatgatctttcttcaagattgacaatgggggcgaaattctttctgttgctggttttttaaccatttcga |
18171796 |
T |
|
| Q |
313 |
acacagctttctgcttaccctctgttttgtcaac |
346 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
18171797 |
acacagctttctgcttaccctctcctttgtcaac |
18171830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 37 - 350
Target Start/End: Original strand, 14342542 - 14342856
Alignment:
| Q |
37 |
gcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
136 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| |||||| ||| ||||| | |
|
|
| T |
14342542 |
gcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagttgccatttcatcgacaaagtcattttccacttcattaatct |
14342641 |
T |
|
| Q |
137 |
ctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
235 |
Q |
| |
|
|| |||| || ||||||||||| | ||||| ||| ||||||| || ||||||||||| || ||||||||| | ||||||||||||||||| |||||||| |
|
|
| T |
14342642 |
ctgactggacatcgtattccacaggcaggattgaaaccacattgcaaactatgtcgaggctcgggtcagattccgtgaaatttgaagtcatctcctcatc |
14342741 |
T |
|
| Q |
236 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctct |
335 |
Q |
| |
|
||| |||| | |||||||||||| |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
14342742 |
ctctttggaacaatctttcttcaaaattgacaatgggggtgaaattctttttgttgctggtttcttaaccatttcgaacacagctttctgcttatcctcc |
14342841 |
T |
|
| Q |
336 |
gttttgtcaacgttg |
350 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
14342842 |
gtttggtcaatgttg |
14342856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 193 - 358
Target Start/End: Original strand, 18133578 - 18133743
Alignment:
| Q |
193 |
gactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgc |
292 |
Q |
| |
|
|||| ||||||||| | ||||||||||||||||| |||||||| || |||| | |||||||||||| |||||||||||||| || |||| ||| ||||| |
|
|
| T |
18133578 |
gacttgggtcagattccgtgaaatttgaagtcatctcctcatcttctttggaacgatctttcttcagaattgacaatgggggtgaaattcgctctgttgc |
18133677 |
T |
|
| Q |
293 |
tggtttcttaaccatttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||||||| ||||||||| |||| ||||| ||||| ||||||||| ||| ||||||| |
|
|
| T |
18133678 |
tggtttcttaaccatctcgaacacaactttttgcttgccctcccttttgtcaatattggtgatgtc |
18133743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 250; Significance: 1e-139; HSPs: 2)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 14 - 346
Target Start/End: Original strand, 126422 - 126755
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| |
|
|
| T |
126422 |
aagtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggattgtgagttgccatttaatcgacgaa |
126521 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
||||||||| | ||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
126522 |
atcactttcaacttcgttaatttctgactaaacgtcgtattccaccggtaggatagaaaccacattgcacactatatcgagactagggtcagatccagtg |
126621 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
126622 |
aaattcgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggcgagattctctctgttgctggtttcttaaccatttcga |
126721 |
T |
|
| Q |
313 |
acacagctttctgcttaccctctgttttgtcaac |
346 |
Q |
| |
|
||||||| |||||||||||||||||||| ||||| |
|
|
| T |
126722 |
acacagccttctgcttaccctctgttttatcaac |
126755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 307
Target Start/End: Original strand, 179176 - 179447
Alignment:
| Q |
37 |
gcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
136 |
Q |
| |
|
|||||||| ||||| |||||||||| || || ||||||||||||||||||||||| || |||||| ||| || |||||||| | |||||||| || |
|
|
| T |
179176 |
gcatgttgatcttcgacacaaccattgtttataacataatagcatagtggcttgtggataatcatttcgtcggtaaagtcactttctacttcgttaactt |
179275 |
T |
|
| Q |
137 |
ctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
235 |
Q |
| |
|
|| | ||||||| || || || | | | || |||||||| |||||||| |||| || |||||||| | |||||| || |||||||| ||||| |
|
|
| T |
179276 |
ctgaaggaacgtcatactcaacaggcaacactgagaccacattgcacactatatcgaagcttgggtcagacttggagaaattcgacgtcatttcttcatc |
179375 |
T |
|
| Q |
236 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
307 |
Q |
| |
|
||| || ||||| ||||||||||| |||||||| || || |||||||| || || |||| ||| |||||||| |
|
|
| T |
179376 |
ctctttaggatggtctttcttcaaaattgacaaaggaggggagattctttctgtggctgattttttaaccat |
179447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 248; Significance: 1e-137; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 8 - 358
Target Start/End: Complemental strand, 11698 - 11347
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
11698 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaactattattcatgacataatagcatagtggcttgttaattgccatttcatc |
11599 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| |||||||||| ||||||| ||||||||||| ||||||| || ||||||| |||||||||||||||| |
|
|
| T |
11598 |
gacgaaatcactttcaacttcgttaatttctgactgaacgtcatattccataggtaggatagaaaccacattgcatactatgttgagactagggtcagat |
11499 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
11498 |
tcagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggttttttaacca |
11399 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
11398 |
tttcgaacacagctttctgcttaccctctgttttgtcaacattggtgatgtc |
11347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 248; Significance: 1e-137; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 16 - 358
Target Start/End: Complemental strand, 23435434 - 23435091
Alignment:
| Q |
16 |
gtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaat |
115 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| || |||||||||||||||||| |
|
|
| T |
23435434 |
gtgtctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagagaattgtgagttaccatttcatcgacgaaat |
23435335 |
T |
|
| Q |
116 |
cactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtgaa |
214 |
Q |
| |
|
||||||| | ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
23435334 |
cactttcaacttcgttaatttctgactgaacgtcgtattccaccagtaagatagaaaccacattgcacactatgtcgagactagggtcagatcccgtgaa |
23435235 |
T |
|
| Q |
215 |
atttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaac |
314 |
Q |
| |
|
||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
23435234 |
attcgaagtcatttcttcatcctccttgggatgatctttcttcaaaattgacaatgggggcgagattctctctattgctggtttcttaaccatttcgaac |
23435135 |
T |
|
| Q |
315 |
acagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||| | |||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
23435134 |
acaaccttctgcttaccctctgttttgtcaacattggtgatgtc |
23435091 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 8 - 358
Target Start/End: Original strand, 19035035 - 19035386
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19035035 |
tcatcgaagtatctggtttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcataatggcttgtgaattgccatttcatc |
19035134 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|||||| |||||||| | ||| ||||||||| |||| |||||||||||||| ||||||| || |||||||| || | || || ||||| ||||||||| |
|
|
| T |
19035135 |
gacgaagtcactttcaacttcattaatttctgactgcacgtcgtattccacaggtaggatcgagaccacattgcatataatatcaagactggggtcagat |
19035234 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| ||||||||||| ||||||| ||||||| || ||||||||| ||||||||||| | ||||||||||| ||||||||||| ||||| | |
|
|
| T |
19035235 |
ccagtgaaattcgaagtcatttcttcatcctttttgggattatttttcttcaaaattgacaatggagatgagattctctctgttgctggttttttaacta |
19035334 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||| |||||| ||||| |||||| ||||||||| ||| ||||||| |
|
|
| T |
19035335 |
tttcgaacatagctttttgcttgccctctcctttgtcaacattggtgatgtc |
19035386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 358
Target Start/End: Original strand, 13289224 - 13289575
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13289224 |
tcatcgaagtgtctggtttttcaaagactgcatgttgctcttctacacaaccgttattcatgacataatagcatagtggcttgtgaattgacatttcatc |
13289323 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | |||||||| ||||||| ||||||||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
13289324 |
gacgaaatcactttcaacttcgttaatttctgaatgaacgtcatattccaaaggtaggatagaaaccacattgcatactatgtcgagactagggtcagat |
13289423 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
13289424 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggcgagattctctctgttgctggctttttaacca |
13289523 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
13289524 |
tttcgaacacagctttctgcttaccctctcctttgtcaacattggtgatgtc |
13289575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 8 - 325
Target Start/End: Original strand, 14772424 - 14772742
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| || |
|
|
| T |
14772424 |
tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc |
14772523 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
14772524 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggatcgagaccacattgcatactatatcgagactggggtcagat |
14772623 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
14772624 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaacca |
14772723 |
T |
|
| Q |
307 |
tttcgaacacagctttctg |
325 |
Q |
| |
|
||||||| |||||| |||| |
|
|
| T |
14772724 |
tttcgaatacagctctctg |
14772742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 259
Target Start/End: Original strand, 18562450 - 18562670
Alignment:
| Q |
40 |
tgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttcta |
139 |
Q |
| |
|
||||| ||||| |||||||||||||||| ||||| ||||||| |||||| ||||| ||||||||||| | ||| |||||||||| ||| || | || |
|
|
| T |
18562450 |
tgttgatcttcgacacaaccattattcataacatagtagcataatggcttatgaatagccatttcatcaatgaagtcactttccacttcattgacctccg |
18562549 |
T |
|
| Q |
140 |
actgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctc |
238 |
Q |
| |
|
| |||| |||||||| || ||||| | || || ||||| || | |||||||||||| ||||||||| ||| || ||||| |||||||| ||||| || |
|
|
| T |
18562550 |
aaggaacatcgtattcgactagtagcactgacacgacattgcatattatgtcgagactcgggtcagattcagaaaagtttgacgtcatttcttcatcttc |
18562649 |
T |
|
| Q |
239 |
cttgggatgatctttcttcaa |
259 |
Q |
| |
|
||| ||| ||||||||||||| |
|
|
| T |
18562650 |
ctttggaggatctttcttcaa |
18562670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 9971 - 9626
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
9971 |
aagtatctggtttttcaaagactgcatgttgctcttctacgcaaccgttattcatgacataataacatagtggcttgtgaattgccatttcgtcgacgaa |
9872 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
||||||||| | ||||||||||||| | ||||||||||||||||| ||||||||||| ||||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
9871 |
atcactttcaacttcgttaatttctgattgaacgtcgtattccacaggtaggatagaaaccacattgcatactatgtcgagactagggtcagatccagtg |
9772 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||||| ||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
9771 |
aaatttgaagtcatttcttcatcctctttgggatgttctttctttaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcga |
9672 |
T |
|
| Q |
313 |
acacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
9671 |
acacagctttctgcttaccctctcctttgtcaacattggtgatgtc |
9626 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 8 - 358
Target Start/End: Original strand, 17422711 - 17423062
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
17422711 |
tcatcgaagtttctggtttttcgaagactgcatgttgctcttctacacaaccattattcatgacataagagcatagtggcttgtgggttgccatttcatc |
17422810 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||||| || |||||||||| |||| || ||||||||||| ||||||||||| ||||||| || ||||||||||| || ||||||||| |
|
|
| T |
17422811 |
gacgaaatcactttccactttgttaatttctgactggacatcgtattccacaggtaggatagaaaccacattgcaaactatgtcgaggctcgggtcagat |
17422910 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
|| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
17422911 |
cccgtgaaattcgaagtcatctcctcatcctctttgggatgatctttcttcaagattgacaatgggggtgagattctctctgttgctggtttcttaacca |
17423010 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
|||||||||| ||||||||||| |||| ||||||||||| ||| ||||||| |
|
|
| T |
17423011 |
tttcgaacacctctttctgcttatcctccgttttgtcaacattggtgatgtc |
17423062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 14 - 328
Target Start/End: Original strand, 22348627 - 22348942
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| || || |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
22348627 |
aagtatctggtttttcaaagacagcatgttgttcctctacacaaccattattcataacataatagcatagtggcttgtgagttgccatttcgtcgacgaa |
22348726 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
|||||||| | ||| |||| |||| ||||||||||||||| ||| ||||||| ||| ||||||| || || || || ||||| |||||||||||| || |
|
|
| T |
22348727 |
gtcactttcaacttcattaacttctgactgaacgtcgtatttcacaggtaggatcgaaaccacattgcatacgatatcaagactggggtcagatccaatg |
22348826 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
22348827 |
aaatttgaagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggtgagattctctctattgctggttttttaaccatttcga |
22348926 |
T |
|
| Q |
313 |
acacagctttctgctt |
328 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
22348927 |
acacaactttctgctt |
22348942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 37 - 325
Target Start/End: Complemental strand, 1735606 - 1735317
Alignment:
| Q |
37 |
gcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
136 |
Q |
| |
|
|||||||| |||||| |||| ||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||| |||||||| | ||| ||||| | |
|
|
| T |
1735606 |
gcatgttgttcttccacacagccattattcatgacataatagcatagtggtttgtgagttgccatctcatcgacgaagtcactttcgacttcattaatat |
1735507 |
T |
|
| Q |
137 |
ctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
235 |
Q |
| |
|
|| |||| || ||||||||||| | | ||| | ||||||||| || |||||||| ||||| ||||||||| | ||||||||||||||||| ||||| || |
|
|
| T |
1735506 |
ctgactggacatcgtattccacaggcaagatggaaaccacattacagactatgtcaagacttgggtcagattccgtgaaatttgaagtcatctcctcgtc |
1735407 |
T |
|
| Q |
236 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctg |
325 |
Q |
| |
|
|| || | |||||||||||||| |||||||||||||| || |||| || |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
1735406 |
ttcttttgaatgatctttcttcagaattgacaatgggggtgaaattcgttctgttgctggcttcttaaccatctcgaacacagctttctg |
1735317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 8 - 319
Target Start/End: Complemental strand, 22068099 - 22067788
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||||||| |||||| ||||||| || ||||| |||||||| |||| ||||| ||||||||||||||||||| |||||| || || ||||||| || |
|
|
| T |
22068099 |
tcatcaaagcatctggtctttcaaaaacggcatgctgctcttcaacacagccattgttcatgacataatagcataatggcttatggatggccattttgtc |
22068000 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|| ||| |||||||| | ||| |||| ||| ||||||||||||||||||| | | | || |||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
22067999 |
gatgaagtcactttcaacttcattaacttccgactgaacgtcgtattccacaggaaaaactgacaccacattgcacactatatcgagact-gggtcagat |
22067901 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| |||||| || ||||||| ||||| || || || |||||||| ||| | ||||| || ||||||| |
|
|
| T |
22067900 |
ccagtgaaattcgaagtcatttcttcatcctccttaggatgacctctcttcaaaattgataagggaggggagattctttccatggctggctttttaacca |
22067801 |
T |
|
| Q |
307 |
tttcgaacacagc |
319 |
Q |
| |
|
||| ||| ||||| |
|
|
| T |
22067800 |
ttttgaaaacagc |
22067788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 8 - 355
Target Start/End: Complemental strand, 10151125 - 10150777
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10151125 |
tcatcgaagtgtctgatttttcaaagactgcatgttgctcttctacacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
10151026 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|| |||||||||||| | ||| ||||||||| || ||||||| |||||||| |||| |||| ||||||||| || |||||||| ||||| ||||||||| |
|
|
| T |
10151025 |
gatgaaatcactttcaacttcattaatttctgacggaacgtcatattccacaggtagtatagaaaccacattgcatactatgtcaagactggggtcagat |
10150926 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||| ||||||| |
|
|
| T |
10150925 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttcttcaaaattgacaatgggggtgagattctctctgtgactggttttttaacca |
10150826 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgat |
355 |
Q |
| |
|
||||||||||| |||| |||| |||||| ||||||||| ||| |||| |
|
|
| T |
10150825 |
tttcgaacacatcttttcgcttgccctctcctttgtcaacattggtgat |
10150777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 72 - 340
Target Start/End: Original strand, 13306797 - 13307066
Alignment:
| Q |
72 |
ataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa |
171 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
13306797 |
ataatagcacagtggcttgtgagttgccatttcatcgacgaaatcactttcaacttcgttaatttctaactgaacatcgtattccaccggtaggatagaa |
13306896 |
T |
|
| Q |
172 |
-ccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatg |
270 |
Q |
| |
|
||||||| || ||||| |||||||||||||||||||| |||||||| |||||||| || |||||||| |||||||||||||||||||| |||||||||| |
|
|
| T |
13306897 |
accacattgcaaactatatcgagactagggtcagatcccgtgaaattcgaagtcatatcttcatcctctttgggatgatctttcttcaaaattgacaatg |
13306996 |
T |
|
| Q |
271 |
ggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctctgtttt |
340 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |
|
|
| T |
13306997 |
ggggtgagattctctctgttgctggtttcttaaccatttcgaacacagttttctgcttatcctgtgtttt |
13307066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 19 - 358
Target Start/End: Original strand, 14693094 - 14693434
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
|||||||| || || || |||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||| ||| |
|
|
| T |
14693094 |
tctggtttctcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcatagtggcttgtgagtttccatttcatcgacgaagtcaa |
14693193 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||| | ||| ||||||||| |||| || ||||||||||| | | ||||||| ||||||| || ||||||||||| | ||||||||| | |||||||| |
|
|
| T |
14693194 |
tttcaacttcattaatttctgactggacatcgtattccacaggcaagatagaaaccacattgcaaactatgtcgaggtttgggtcagattccgtgaaatt |
14693293 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
317 |
Q |
| |
|
||||||||| |||| |||||| |||| ||| |||||||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
14693294 |
tgaagtcatctccttatcctctttggaatggtctttcttcaagattgacaatgggggtgaaattctctctgttgctggttttttaaccatttcgaacacg |
14693393 |
T |
|
| Q |
318 |
gctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||| |||| |||||||||| ||| ||||||| |
|
|
| T |
14693394 |
gctttctgcttgtcctccgttttgtcaatattggtgatgtc |
14693434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 19 - 345
Target Start/End: Original strand, 7401854 - 7402181
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||| || ||||| || |||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
7401854 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7401953 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||||| ||| ||||| ||| |||| || ||||||||| | | ||||| | ||||||||| || |||||||||||||| |||||| || | |||||||| |
|
|
| T |
7401954 |
tttccacttcattaatctctgactggacatcgtattcctcaggcaggattgaaaccacattgcaaactatgtcgagactcgggtcacattccgtgaaatt |
7402053 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
317 |
Q |
| |
|
||||||||| ||||||||||| |||| | || |||||||| |||||||||||||| || ||||| || ||||||| ||||||||||||||||||||| |
|
|
| T |
7402054 |
tgaagtcatctcctcatcctctttggaacaatacttcttcaaaattgacaatgggggtgaaattctttctgttgctgccttcttaaccatttcgaacaca |
7402153 |
T |
|
| Q |
318 |
gctttctgcttaccctctgttttgtcaa |
345 |
Q |
| |
|
|||||||| ||| |||| ||||||||| |
|
|
| T |
7402154 |
gctttctgtttatcctccattttgtcaa |
7402181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 37 - 328
Target Start/End: Complemental strand, 10782465 - 10782173
Alignment:
| Q |
37 |
gcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaattt |
136 |
Q |
| |
|
|||||||| |||||| |||| |||||||||||||||||||||| ||||| |||||| ||||||| |||||||| ||||||||||| ||| ||||||| |
|
|
| T |
10782465 |
gcatgttgttcttccacacagtcattattcatgacataatagcacagtggtttgtgagttgccatctcatcgacaaaatcactttcggcttcattaattt |
10782366 |
T |
|
| Q |
137 |
ctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatc |
235 |
Q |
| |
|
|| |||| || || |||||||| | | || ||| ||||||| || |||||||| ||||| ||||||||| | |||||||| ||||||||||||||||| |
|
|
| T |
10782365 |
ctgactggacatcatattccacaggcaaaatggaaaccacattacaaactatgtcaagacttgggtcagattctgtgaaattcgaagtcatttcctcatc |
10782266 |
T |
|
| Q |
236 |
ctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgctt |
328 |
Q |
| |
|
|| || |||||||||||| ||| || |||||||||||||| |||| ||| |||||||| ||||||||||| || ||||||||||||||||| |
|
|
| T |
10782265 |
ttcttttggatgatctttcatcagaatcgacaatgggggcgaaattcgctctgttgctggcttcttaaccatctcaaacacagctttctgctt |
10782173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 7365311 - 7365426
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||| || ||||| || |||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
7365311 |
tctggcttctcaaaaaccgcatgttgttcttccacgcagccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacaaagtcac |
7365410 |
T |
|
| Q |
119 |
tttccatttcgttaat |
134 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
7365411 |
tttccacttcattaat |
7365426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 328
Target Start/End: Complemental strand, 21511327 - 21511006
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||| || |
|
|
| T |
21511327 |
tcatcgaagtgtctggtttttcaaagacggcatgttgttcttctacacaaccattattcacgacgtaatagcatagtggcttgtgagttgccatttcgtc |
21511228 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||| ||||||||||||| |||||||| ||| |||||||||||||||||||| |||| ||| || |||||||| || | || || ||||| ||||||||| |
|
|
| T |
21511227 |
gacaaaatcactttccacttcgttaacttccaactgaacgtcgtattccacaagtaagatcgagaccacattgcatatgatatcaagactggggtcagat |
21511128 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||| ||||||||||| ||||||| |
|
|
| T |
21511127 |
ccagtgaaatttgaagtcatttcttcatcctccttgggatgatctttctttaaaattgacaatgggggtgagattctctctgttgctggttttttaacca |
21511028 |
T |
|
| Q |
307 |
tttcgaacacagctttctgctt |
328 |
Q |
| |
|
|||||||||| ||||||||||| |
|
|
| T |
21511027 |
tttcgaacaccgctttctgctt |
21511006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 8 - 358
Target Start/End: Complemental strand, 29959 - 29608
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
29959 |
tcatcgaagtgtctggtttttctaagactgcatgatgctcttctacataaccattattcatgacataatagcatagtggcttgtgaatttccatttcatc |
29860 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatag-aaccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||| || |||||||| || || ||||||||| |
|
|
| T |
29859 |
gacgaaatcactttcaacttcattaatttctgactgaacgtcgtattccactggtaggatagaaaccacattgcatactatgtctaggctggggtcagat |
29760 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
|| ||||||| ||| |||||||| |||||||| |||||||||||||||||||| |||||||| ||||| ||||||||||| | |||||||| ||||||| |
|
|
| T |
29759 |
ccggtgaaatctgaggtcatttcttcatcctctttgggatgatctttcttcaaaattgacaacgggggtgagattctctctatggctggttttttaacca |
29660 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||| |||| ||||| |||| | ||||||||| ||| ||||||| |
|
|
| T |
29659 |
tttcgaacacatctttttgcttgccctttcttttgtcaatattggtgatgtc |
29608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 186; Significance: 1e-100; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 14 - 358
Target Start/End: Complemental strand, 26539 - 26194
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||| |||||||| |||||| || ||||||| |||||||| |
|
|
| T |
26539 |
aagtgtctggtttttcaaatactgcatgttgctcttccacacatccgttattcatgacataataacatagtggtttgtgagtttccatttcgtcgacgaa |
26440 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
||||||||| | ||||||||||||| | |||||||| |||||||| ||||||| || ||||| || || |||||||||||||||||||||||||||||| |
|
|
| T |
26439 |
atcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatggacaccacgttgcatactatgtcgagactagggtcagatccagtg |
26340 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||| |||||||| || |||||||||||| || ||||||||||| |||||||||||||| ||||||||||| |||||||| || ||||||||||||| |
|
|
| T |
26339 |
aaattcgaagtcatctcttcatcctccttgagagagtctttcttcaaaattgacaatgggggtgagattctctctgttgctggctttttaaccatttcga |
26240 |
T |
|
| Q |
313 |
acacagctttctgcttaccctctgttttgtcaacgttgatgatgtc |
358 |
Q |
| |
|
||||||||||||| ||| ||||| ||||||||| ||| ||||||| |
|
|
| T |
26239 |
acacagctttctgtttatcctctcctttgtcaacattggtgatgtc |
26194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 8 - 335
Target Start/End: Original strand, 37450 - 37778
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||| |||||||| |||||| | |||||||| || |
|
|
| T |
37450 |
tcatcgaagtgtctggtttttcaaatactgcatgttgctcttccacacatccattattcatgacataataacatagtggtttgtgagtagccatttcgtc |
37549 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
||||||||||||||| | ||||||||||||| | |||||||| |||||||| |||||||||| ||||| || || |||||||||||||||||||||||| |
|
|
| T |
37550 |
gacgaaatcactttcgacttcgttaatttctgattgaacgtcatattccacaggtaggatagacaccacgttacatactatgtcgagactagggtcagat |
37649 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| |||||||| || ||||||||||||||| ||||||||||| |||||||||||||| || ||||||| |||||||| || ||||||| |
|
|
| T |
37650 |
ccagtgaaattcgaagtcatatcttcatcctccttgggaaagtctttcttcaaaattgacaatgggggtgaaattctctatgttgctggctttttaacca |
37749 |
T |
|
| Q |
307 |
tttcgaacacagctttctgcttaccctct |
335 |
Q |
| |
|
||||||||||||||||||| ||| ||||| |
|
|
| T |
37750 |
tttcgaacacagctttctgtttaacctct |
37778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0241 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0241
Description:
Target: scaffold0241; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 325
Target Start/End: Complemental strand, 11805 - 11493
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
|||| |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||| |
|
|
| T |
11805 |
aagtatctggtttttcaaacacagcatgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtcaacgaa |
11706 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
|||||||| | ||| |||| ||| ||||||||||||||||||| ||||||| || |||||||| || || || || ||||| ||||||||||||||| |
|
|
| T |
11705 |
gtcactttcaacttcattaacttccgactgaacgtcgtattccacaggtaggattgagaccacattgcatacgatatcaagactggggtcagatccagtg |
11606 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
11605 |
aaatttgaagtcatttcttcatcctctttgggatgatctttctttataattgacaatgggggtgagattctctctgttgctggttttttaaccatttcga |
11506 |
T |
|
| Q |
313 |
acacagctttctg |
325 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
11505 |
atacagctttctg |
11493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0282 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0282
Description:
Target: scaffold0282; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 18 - 328
Target Start/End: Original strand, 5405 - 5716
Alignment:
| Q |
18 |
gtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatca |
117 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||| ||| |
|
|
| T |
5405 |
gtctggtttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgaagtca |
5504 |
T |
|
| Q |
118 |
ctttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaat |
216 |
Q |
| |
|
||||| | ||| |||| |||| ||||||||||||||||||| |||| || || |||||||| || ||||| |||||||| ||||||||||||||||||| |
|
|
| T |
5505 |
ctttcaacttcattaacttctgactgaacgtcgtattccacaggtagaattgagaccacattgcatactatatcgagactggggtcagatccagtgaaat |
5604 |
T |
|
| Q |
217 |
ttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacac |
316 |
Q |
| |
|
||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| | ||||||||| || || |
|
|
| T |
5605 |
ttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaaccatttcaaatac |
5704 |
T |
|
| Q |
317 |
agctttctgctt |
328 |
Q |
| |
|
| || ||||||| |
|
|
| T |
5705 |
aactctctgctt |
5716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 8 - 310
Target Start/End: Complemental strand, 67306 - 67003
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| ||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| || |
|
|
| T |
67306 |
tcatcgaagcgtctggtttttcaaagacaacatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtc |
67207 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||||| ||||||||| |
|
|
| T |
67206 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagactggggtcagat |
67107 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| | ||||| |
|
|
| T |
67106 |
ccagtgaaatttgaagtcatttcttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggtttttaaacca |
67007 |
T |
|
| Q |
307 |
tttc |
310 |
Q |
| |
|
|||| |
|
|
| T |
67006 |
tttc |
67003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 161; Significance: 9e-86; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 161; E-Value: 9e-86
Query Start/End: Original strand, 14 - 333
Target Start/End: Original strand, 126623 - 126943
Alignment:
| Q |
14 |
aagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaa |
113 |
Q |
| |
|
|||| |||||||||||||| || || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |
|
|
| T |
126623 |
aagtatctggtttttcaaatacggcgtgttgttcttctacacaaccattattcatgacataatagcatagtggcttgtgagttgccatttcgtcgatgaa |
126722 |
T |
|
| Q |
114 |
atcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtg |
212 |
Q |
| |
|
|||||||| | |||||||| ||| ||| ||||||||||||||| ||||||| || |||||||| || || || || ||||| ||||||||||| ||| |
|
|
| T |
126723 |
gtcactttcaacttcgttaacttccgactaaacgtcgtattccacaggtaggatcgagaccacattgcatacgatatcaagactggggtcagatcccgtg |
126822 |
T |
|
| Q |
213 |
aaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcga |
312 |
Q |
| |
|
||||||||||||||||| |||||||| ||||||||||||||||| || ||| |||||||||| ||||||||||| |||| |||||| ||||||||||||| |
|
|
| T |
126823 |
aaatttgaagtcatttcttcatcctcattgggatgatctttctttaaaattcacaatgggggtgagattctctctgttgttggttttttaaccatttcga |
126922 |
T |
|
| Q |
313 |
acacagctttctgcttaccct |
333 |
Q |
| |
|
|||| ||||||||||| |||| |
|
|
| T |
126923 |
acaccgctttctgctttccct |
126943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 8 - 328
Target Start/End: Original strand, 138830 - 139151
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||||||||| ||||||||||| |||||||| ||||| |||||| |||||||||||||||||| |||||||||||||| | |||||||| || |
|
|
| T |
138830 |
tcatcgaagtgtctggcttttcaaagacagcatgttgttcttctacacaactattattcatgacataataacatagtggcttgtgtgtcgccatttcgtc |
138929 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattccaccagtaggatagaa-ccacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|||||| |||||||| | ||| |||| |||| |||||||||||||||| || ||||||| ||| ||||||| || ||||||||||||||||||||||| |
|
|
| T |
138930 |
gacgaagtcactttcaacttcattaacttctgactgaacgtcgtattctacaggtaggattgaaaccacattgcatactatgtcgagactagggtcagac |
139029 |
T |
|
| Q |
207 |
ccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaacca |
306 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| |||||||| |||||||| ||||||||||| || || ||||| |||| ||||||||||| ||||||| |
|
|
| T |
139030 |
ccagtgaaattcgaagtcatttcttcatcctctttgggatggtctttctttaagattgacaagggaggtgagatcctctttgttgctggttttttaacca |
139129 |
T |
|
| Q |
307 |
tttcgaacacagctttctgctt |
328 |
Q |
| |
|
||||||| |||||| ||||||| |
|
|
| T |
139130 |
tttcgaatacagctctctgctt |
139151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0656 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0656
Description:
Target: scaffold0656; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 19 - 320
Target Start/End: Complemental strand, 5367 - 5065
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||| || | |||||||| || ||||| |||| |
|
|
| T |
5367 |
tctggtttttcaaagacagcatgttgttcttccacacaaccattattcatgacataataacatagtggcttatgcgtagccatttcgtcaacgaagtcac |
5268 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||| | ||| |||| |||| || |||||||||||||||| |||| || || |||||||| || |||||||||||||| ||||||||||||||||||| |
|
|
| T |
5267 |
tttcaacttcattaacttctgacagaacgtcgtattccacaggtagaattgataccacattgcatactatgtcgagactgaggtcagatccagtgaaatt |
5168 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
317 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| || |||||||||||||| ||| |
|
|
| T |
5167 |
cgaagtcatttcttcatcctccttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggctttttaaccatttcgaaaaca |
5068 |
T |
|
| Q |
318 |
gct |
320 |
Q |
| |
|
||| |
|
|
| T |
5067 |
gct |
5065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 31 - 328
Target Start/End: Original strand, 22805718 - 22806016
Alignment:
| Q |
31 |
aagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgt |
130 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||| |||||||| | ||| | |
|
|
| T |
22805718 |
aagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcgacgatgtcactttcaacttcat |
22805817 |
T |
|
| Q |
131 |
taatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttc |
229 |
Q |
| |
|
||| |||| ||||||||||||||||||| ||||||| || |||||||| || ||||| |||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
22805818 |
taacttctgactgaacgtcgtattccacaggtaggattgagaccacattgcatactatatcgagattggggtcagatccagtgaaatttgaagtcatttc |
22805917 |
T |
|
| Q |
230 |
ctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgctt |
328 |
Q |
| |
|
|||||||| ||||||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| ||||||||||| || |||||| ||||||| |
|
|
| T |
22805918 |
ttcatcctctttgggatgatctttctttagaattgacaatgggggtgagattctctctgttgctggttttttaaccatttcaaatacagctctctgctt |
22806016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 41380266 - 41380405
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||| ||||| || || |||||||| |||||| |||| ||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||||| |||| |
|
|
| T |
41380266 |
tctggcttttcgaaaaccgcatgttgttcttccacacagccattattcatgacataatagcacagtggtttgtgagttgccatctcatcgacgaagtcac |
41380365 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccac |
158 |
Q |
| |
|
|||| | ||| ||||||| | |||| || ||||||||||| |
|
|
| T |
41380366 |
tttcgacttcattaatttttgactggacatcgtattccac |
41380405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 334
Target Start/End: Original strand, 41380418 - 41380507
Alignment:
| Q |
245 |
atgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgcttaccctc |
334 |
Q |
| |
|
||||||||||||||| |||||||||||||| || |||| ||| |||||||| ||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
41380418 |
atgatctttcttcaaaattgacaatgggggtgaaattcgctctgttgctggcttcttaaccatctcgaacacagctttctgcttgccctc |
41380507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 22508072 - 22508100
Alignment:
| Q |
208 |
cagtgaaatttgaagtcatttcctcatcc |
236 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
22508072 |
cagtgaaatttgaagtcatttcctcatcc |
22508100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0362 (Bit Score: 104; Significance: 9e-52; HSPs: 1)
Name: scaffold0362
Description:
Target: scaffold0362; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 19 - 321
Target Start/End: Complemental strand, 14766 - 14463
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
|||||| |||||||||| |||||||| || || |||| ||||| ||||||||||||||||||| |||||| || | |||||||| |||| ||| |||| |
|
|
| T |
14766 |
tctggtctttcaaagacagcatgttgttcctcaacacagccattgttcatgacataatagcataatggcttatgggtggccatttcgtcgatgaagtcac |
14667 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||| | ||| |||| |||| ||||||||||||||||||| | | | || || ||||| || | ||| |||||||| |||| ||||||||||||||| |
|
|
| T |
14666 |
tttcaacttcattaacttctgactgaacgtcgtattccacaggcaaaactgacacgacattgcatattatatcgagactggggttagatccagtgaaatt |
14567 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacaca |
317 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||||||| ||||| || || || |||||||| ||||| |||||||| |||||||||||||| ||| |
|
|
| T |
14566 |
cgaagtcatttcttcatcctccttaggatgatctctcttcaaaattgataagggaggggagattctttccgtggctggttttttaaccatttcgaaaaca |
14467 |
T |
|
| Q |
318 |
gctt |
321 |
Q |
| |
|
|||| |
|
|
| T |
14466 |
gctt |
14463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 8 - 157
Target Start/End: Complemental strand, 69781 - 69632
Alignment:
| Q |
8 |
tcatcaaagtgtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatc |
107 |
Q |
| |
|
||||| |||| ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||| | | |||||||||| ||||||||||||| |
|
|
| T |
69781 |
tcatcgaagtatctggtttttcgaagactggatgttgctcttctacacaaccattattcatgacataatagtacaatggcttgtgagttgccatttcatc |
69682 |
T |
|
| Q |
108 |
gacgaaatcactttccatttcgttaatttctaactgaacgtcgtattcca |
157 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||| |||||||||| |
|
|
| T |
69681 |
gacgaaatcactttccacttcgttaatttctgactgaacatcgtattcca |
69632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 171 - 328
Target Start/End: Original strand, 159086 - 159243
Alignment:
| Q |
171 |
accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatg |
270 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | ||||||||||||||| || | |
|
|
| T |
159086 |
accacattgcatactatgtcgagactagggtcagatccagtgaaattcgaagtcatttcttcatcctccttgggatggtttttcttcaagattgataagg |
159185 |
T |
|
| Q |
271 |
ggggcgagattctctccgttgctggtttcttaaccatttcgaacacagctttctgctt |
328 |
Q |
| |
|
| || |||||||| || |||||||| || ||||||||||| || || ||||||||||| |
|
|
| T |
159186 |
gcggtgagattctttctgttgctggctttttaaccatttcaaaaacggctttctgctt |
159243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 156416 - 156555
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||| |||||||| || ||||||| ||||| |||||||||| ||||| |||||||| ||||||||||| || | |||||||||| ||||| |||| |
|
|
| T |
156416 |
tctggcttttcaaaaacaacatgttgttcttcaacacaaccattgttcataacataataacatagtggcttatgcgtcaccatttcatcaacgaagtcac |
156515 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccac |
158 |
Q |
| |
|
|||| | ||| |||| |||| ||||||||| ||||||||| |
|
|
| T |
156516 |
tttcaacttcattaacttctgactgaacgttgtattccac |
156555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0046 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0046
Description:
Target: scaffold0046; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 19 - 265
Target Start/End: Complemental strand, 33874 - 33627
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||||| |||||| || |||||||| ||||| |||| ||||| ||||||||||||||||||| |||||| || | |||||||| ||| ||| |||| |
|
|
| T |
33874 |
tctggttattcaaaaacagcatgttgttcttcaacacagccattgttcatgacataatagcataatggcttatgtgtcgccatttcgtcggtgaagtcac |
33775 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatt |
217 |
Q |
| |
|
|||| | ||| |||| || ||||||| ||||||||||| | | | || |||||||| ||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
33774 |
tttcaacttcattaactttcgactgaacatcgtattccacaggcaaaactgacaccacattgcacactatgtcgagactggggtcagatccaatgaaatt |
33675 |
T |
|
| Q |
218 |
tgaagtcatttcctcatcctccttgggatgatctttcttcaagattga |
265 |
Q |
| |
|
||||||||||| |||||||| |||||||| ||||||||||||||||| |
|
|
| T |
33674 |
cgaagtcatttcttcatcctctttgggatggtctttcttcaagattga |
33627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0107
Description:
Target: scaffold0107; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 19 - 206
Target Start/End: Complemental strand, 4461 - 4273
Alignment:
| Q |
19 |
tctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcac |
118 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||| |||| |
|
|
| T |
4461 |
tctggcttttcaaagacagcatgttgttcttctacacaaccattattcatgacataataacatagtggcttgtgtgttgccatttcgtcaacgaagtcac |
4362 |
T |
|
| Q |
119 |
tttccatttcgttaatttctaactgaacgtcgtattccaccagtaggataga-accacattccacactatgtcgagactagggtcagat |
206 |
Q |
| |
|
|||| | ||| |||| |||| | ||||| ||||||||||| ||||||| || ||| |||| || |||||||||||||| ||||||||| |
|
|
| T |
4361 |
tttcaacttcattaacttctgattgaacttcgtattccacatgtaggattgataccgcattgcatactatgtcgagactggggtcagat |
4273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0107; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 328
Target Start/End: Complemental strand, 2001 - 1874
Alignment:
| Q |
201 |
tcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttct |
300 |
Q |
| |
|
||||| ||||||||||| ||||||||||| ||||||| ||||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||||||||| | |
|
|
| T |
2001 |
tcagacccagtgaaattcgaagtcatttcttcatcctacttgggatggtctttctttaagattgacaaggggggtgagattctctctgttgctggttttt |
1902 |
T |
|
| Q |
301 |
taaccatttcgaacacagctttctgctt |
328 |
Q |
| |
|
||||||||||||| |||||| ||||||| |
|
|
| T |
1901 |
taaccatttcgaaaacagctctctgctt |
1874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0023
Description:
Target: scaffold0023; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 65376 - 65268
Alignment:
| Q |
220 |
aagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagc |
319 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
65376 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
65277 |
T |
|
| Q |
320 |
tttctgctt |
328 |
Q |
| |
|
||||||||| |
|
|
| T |
65276 |
tttctgctt |
65268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0023; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 220 - 328
Target Start/End: Complemental strand, 74554 - 74446
Alignment:
| Q |
220 |
aagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacagc |
319 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||| | |
|
|
| T |
74554 |
aagtcatttcttcatcctctttgggatgatctttctttaaaattgacaatgggggttagattctctctgttgctggttttttaaccatttcgaacacaac |
74455 |
T |
|
| Q |
320 |
tttctgctt |
328 |
Q |
| |
|
||||||||| |
|
|
| T |
74454 |
tttctgctt |
74446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: scaffold0013
Description:
Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 53 - 307
Target Start/End: Complemental strand, 75660 - 75405
Alignment:
| Q |
53 |
cacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgta |
152 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| || || |||||||||||| ||||||||||| | |||||||| ||| | ||||||| || |
|
|
| T |
75660 |
cacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcata |
75561 |
T |
|
| Q |
153 |
ttccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatct |
251 |
Q |
| |
|
||| | | | | || |||||||| || ||||| |||||||| | ||||||| | ||||||||||| |||||||| |||||||| || ||||| ||| |
|
|
| T |
75560 |
ttcaataggcaatactgataccacattgcatactatatcgagacttgagtcagattctgtgaaatttgacgtcatttcttcatcctctttaggatggtct |
75461 |
T |
|
| Q |
252 |
ttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
307 |
Q |
| |
|
|||||||| ||||| || || || |||||||| ||||| |||||||| |||||||| |
|
|
| T |
75460 |
ttcttcaaaattgataaaggaggggagattctttccgtggctggttttttaaccat |
75405 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 307
Target Start/End: Complemental strand, 84089 - 83834
Alignment:
| Q |
53 |
cacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgta |
152 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| || || |||||||||||| ||||||||||| | |||||||| ||| | ||||||| || |
|
|
| T |
84089 |
cacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcata |
83990 |
T |
|
| Q |
153 |
ttccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatct |
251 |
Q |
| |
|
||| | | | | || |||||||| || ||||| |||||||| ||||||||| | ||||||||||| ||||||| |||||||| || | ||| ||| |
|
|
| T |
83989 |
ttcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtct |
83890 |
T |
|
| Q |
252 |
ttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
307 |
Q |
| |
|
|||||||| ||||| || || || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
83889 |
ttcttcaaaattgataaaggaggggagattctttccgtggctggttttataaccat |
83834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 307
Target Start/End: Complemental strand, 121761 - 121506
Alignment:
| Q |
53 |
cacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaatttctaactgaacgtcgta |
152 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||| || || |||||||||||| ||||||||||| | |||||||| ||| | ||||||| || |
|
|
| T |
121761 |
cacaaccattgttcataacataatagcatagtggcttatggatagccatttcatcggtaaaatcactttctacttcgttaacctcttaaggaacgtcata |
121662 |
T |
|
| Q |
153 |
ttccaccagtaggataga-accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatct |
251 |
Q |
| |
|
||| | | | | || |||||||| || ||||| |||||||| ||||||||| | ||||||||||| ||||||| |||||||| || | ||| ||| |
|
|
| T |
121661 |
ttcaataggcaatactgataccacattgcatactatatcgagacttgggtcagattctgtgaaatttgacgtcattttttcatcctctttagtatggtct |
121562 |
T |
|
| Q |
252 |
ttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccat |
307 |
Q |
| |
|
|||||||| ||||| || || || |||||||| ||||| |||||||| ||||||| |
|
|
| T |
121561 |
ttcttcaaaattgataaaggaggggagattctttccgtggctggttttataaccat |
121506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0013; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 149016 - 148936
Alignment:
| Q |
53 |
cacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatcactttccatttcgttaa |
133 |
Q |
| |
|
|||||||||| ||||| ||||||||||||| |||||| || || |||||||||||| ||||||||||| | |||||||| |
|
|
| T |
149016 |
cacaaccattgttcataacataatagcataatggcttatggatagccatttcatcggtaaaatcactttctacttcgttaa |
148936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:
Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 171 - 265
Target Start/End: Original strand, 42285 - 42379
Alignment:
| Q |
171 |
accacattccacactatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaagattga |
265 |
Q |
| |
|
|||||||| |||||||| |||||||| || |||||| |||||||||| || |||||||| ||||||||||| ||||||| ||||||||| ||||| |
|
|
| T |
42285 |
accacattgcacactatatcgagacttggatcagattcagtgaaattcgacgtcatttcttcatcctccttaggatgatttttcttcaaaattga |
42379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 259
Target Start/End: Original strand, 48913 - 48987
Alignment:
| Q |
185 |
tatgtcgagactagggtcagatccagtgaaatttgaagtcatttcctcatcctccttgggatgatctttcttcaa |
259 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||| || || |||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
48913 |
tatgtcgagacttgggtcagattcagagaagttcgacgtcatttcttcatcctcctttggatgatctttcttcaa |
48987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:
Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 127000 - 127110
Alignment:
| Q |
18 |
gtctggtttttcaaagactgcatgttgctcttcctcacaaccattattcatgacataatagcatagtggcttgtgaattgccatttcatcgacgaaatca |
117 |
Q |
| |
|
||||||| |||| || || || ||||| ||||| ||| |||||||||||| ||||||||||||| |||||| ||||| ||||||||||| ||||||| |
|
|
| T |
127000 |
gtctggtctttcgaatacggcgtgttgatcttcaacaccaccattattcataacataatagcataatggcttatgaatcgccatttcatcagtgaaatca |
127099 |
T |
|
| Q |
118 |
ctttccatttc |
128 |
Q |
| |
|
||||| ||||| |
|
|
| T |
127100 |
ctttctatttc |
127110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0423 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0423
Description:
Target: scaffold0423; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 322
Target Start/End: Complemental strand, 5228 - 5125
Alignment:
| Q |
219 |
gaagtcatttcctcatcctccttgggatgatctttcttcaagattgacaatgggggcgagattctctccgttgctggtttcttaaccatttcgaacacag |
318 |
Q |
| |
|
||||||||||| |||||| | |||||||| |||||||| ||||||| || || || |||||||| |||| |||| | || |||||||||||||| |||| |
|
|
| T |
5228 |
gaagtcatttcttcatccactttgggatggtctttcttagagattgataagggaggtgagattctttccgctgctagctttttaaccatttcgaaaacag |
5129 |
T |
|
| Q |
319 |
cttt |
322 |
Q |
| |
|
|||| |
|
|
| T |
5128 |
cttt |
5125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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