View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4988_low_9 (Length: 241)
Name: NF4988_low_9
Description: NF4988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4988_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 42895742 - 42895593
Alignment:
| Q |
10 |
agatgaataggaaaatgggcatgaagggaaacgagatacattgataggtgaataaacacaaatgagagcaaacctttatgaaggtttgagtcatgcattt |
109 |
Q |
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| T |
42895742 |
agatgaataggaaaatgggcatgaagggaaacgagatacattgataggtgaataaacacaaatgagagcaaacctttatgaaggtttgagtcat------ |
42895649 |
T |
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| Q |
110 |
tggatgagaattatgcaaaaggaagcaaaatgtaaagaaaaaaatatcatggacatcaaag |
170 |
Q |
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| T |
42895648 |
----aaaggtttatgcaaaaggaagcaaaatgtaaag-aaaaaatatcatggacatcaaag |
42895593 |
T |
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