View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4989_high_12 (Length: 316)

Name: NF4989_high_12
Description: NF4989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4989_high_12
NF4989_high_12
[»] chr1 (46 HSPs)
chr1 (16-124)||(6029464-6029572)
chr1 (16-127)||(15540053-15540164)
chr1 (15-132)||(42510419-42510537)
chr1 (15-132)||(844886-845004)
chr1 (16-132)||(11772795-11772911)
chr1 (25-132)||(24339809-24339917)
chr1 (16-132)||(50304546-50304662)
chr1 (38-132)||(38087181-38087275)
chr1 (16-132)||(50540238-50540355)
chr1 (16-132)||(10384262-10384378)
chr1 (16-132)||(25539750-25539866)
chr1 (16-132)||(31004027-31004143)
chr1 (15-121)||(6711208-6711315)
chr1 (15-97)||(26118377-26118460)
chr1 (15-132)||(7183812-7183930)
chr1 (15-124)||(12890140-12890250)
chr1 (15-132)||(16386748-16386866)
chr1 (15-132)||(16451021-16451139)
chr1 (16-121)||(42512933-42513038)
chr1 (16-132)||(39281789-39281905)
chr1 (25-132)||(41972806-41972914)
chr1 (15-133)||(45491037-45491156)
chr1 (15-132)||(1351597-1351714)
chr1 (15-132)||(46154794-46154912)
chr1 (16-132)||(17887841-17887958)
chr1 (15-127)||(28340465-28340578)
chr1 (16-93)||(45658755-45658832)
chr1 (16-112)||(6144149-6144245)
chr1 (25-132)||(16476327-16476434)
chr1 (41-132)||(26764978-26765069)
chr1 (25-114)||(51264407-51264497)
chr1 (16-124)||(17327812-17327921)
chr1 (15-132)||(38663027-38663144)
chr1 (25-132)||(51703334-51703442)
chr1 (15-132)||(35387473-35387591)
chr1 (15-132)||(44738203-44738321)
chr1 (25-132)||(41968021-41968129)
chr1 (15-97)||(30105842-30105925)
chr1 (16-88)||(13994237-13994310)
chr1 (15-72)||(16437317-16437374)
chr1 (25-90)||(21071661-21071726)
chr1 (25-97)||(51374486-51374558)
chr1 (25-95)||(20495063-20495134)
chr1 (15-97)||(34663856-34663939)
chr1 (15-58)||(50382565-50382608)
chr1 (36-132)||(8838833-8838929)
[»] chr5 (37 HSPs)
chr5 (16-132)||(37148668-37148784)
chr5 (16-124)||(18470522-18470630)
chr5 (15-112)||(31770684-31770782)
chr5 (15-124)||(32528608-32528718)
chr5 (15-127)||(40182354-40182467)
chr5 (16-127)||(41790556-41790668)
chr5 (15-127)||(6284392-6284505)
chr5 (16-132)||(7725903-7726019)
chr5 (16-132)||(7770373-7770489)
chr5 (24-124)||(32093083-32093183)
chr5 (25-132)||(4689801-4689908)
chr5 (15-97)||(29241298-29241381)
chr5 (15-132)||(2351565-2351683)
chr5 (15-132)||(20119656-20119776)
chr5 (15-132)||(35701162-35701280)
chr5 (16-125)||(39918399-39918509)
chr5 (25-97)||(24181727-24181800)
chr5 (16-112)||(3735263-3735359)
chr5 (25-132)||(4818243-4818351)
chr5 (16-127)||(5673034-5673146)
chr5 (25-132)||(34794772-34794880)
chr5 (53-132)||(7523056-7523135)
chr5 (25-127)||(8136729-8136832)
chr5 (31-114)||(35954917-35955000)
chr5 (16-85)||(5571736-5571806)
chr5 (16-97)||(39788112-39788194)
chr5 (16-132)||(24036118-24036232)
chr5 (16-114)||(22493512-22493611)
chr5 (15-97)||(41459509-41459592)
chr5 (15-132)||(11963226-11963344)
chr5 (17-95)||(31644369-31644447)
chr5 (25-97)||(31880179-31880252)
chr5 (18-87)||(700697-700767)
chr5 (25-63)||(14011549-14011587)
chr5 (51-97)||(22432435-22432481)
chr5 (15-127)||(28090613-28090724)
chr5 (25-132)||(21739264-21739367)
[»] chr7 (48 HSPs)
chr7 (16-132)||(329360-329476)
chr7 (16-126)||(48445417-48445527)
chr7 (15-132)||(18470573-18470691)
chr7 (15-132)||(36769657-36769775)
chr7 (27-132)||(3892126-3892232)
chr7 (15-132)||(10932645-10932763)
chr7 (15-132)||(11321973-11322091)
chr7 (15-132)||(47947649-47947767)
chr7 (15-132)||(47953079-47953197)
chr7 (25-132)||(26994323-26994431)
chr7 (15-132)||(3922791-3922909)
chr7 (15-132)||(32873857-32873975)
chr7 (16-132)||(34295493-34295609)
chr7 (15-85)||(11250558-11250629)
chr7 (41-132)||(11822121-11822212)
chr7 (25-127)||(30599106-30599209)
chr7 (25-132)||(43368091-43368198)
chr7 (15-93)||(43214013-43214091)
chr7 (25-121)||(12982203-12982300)
chr7 (16-132)||(21784760-21784877)
chr7 (16-121)||(26652767-26652872)
chr7 (16-132)||(30849335-30849452)
chr7 (16-113)||(48894626-48894723)
chr7 (16-124)||(22724121-22724229)
chr7 (16-124)||(22724620-22724728)
chr7 (24-127)||(41665672-41665775)
chr7 (15-127)||(26371897-26372010)
chr7 (16-132)||(43189332-43189449)
chr7 (25-121)||(1363538-1363634)
chr7 (16-112)||(9913435-9913531)
chr7 (16-112)||(9927123-9927219)
chr7 (25-132)||(41211299-41211407)
chr7 (25-124)||(37966872-37966971)
chr7 (15-97)||(40753079-40753162)
chr7 (15-132)||(43158774-43158892)
chr7 (15-132)||(46633586-46633704)
chr7 (25-108)||(1870047-1870131)
chr7 (38-94)||(29455957-29456013)
chr7 (28-87)||(15035354-15035413)
chr7 (16-88)||(16028013-16028084)
chr7 (28-124)||(23349392-23349488)
chr7 (36-132)||(26910517-26910612)
chr7 (25-93)||(46448742-46448810)
chr7 (36-95)||(14608501-14608560)
chr7 (15-132)||(18386414-18386532)
chr7 (16-97)||(29661247-29661329)
chr7 (16-82)||(34117392-34117458)
chr7 (53-132)||(20127177-20127254)
[»] scaffold0280 (1 HSPs)
scaffold0280 (16-132)||(13781-13897)
[»] chr8 (45 HSPs)
chr8 (16-114)||(29611158-29611256)
chr8 (16-132)||(15001352-15001469)
chr8 (16-132)||(35225548-35225664)
chr8 (15-132)||(8673157-8673275)
chr8 (25-132)||(37618504-37618611)
chr8 (15-132)||(3251758-3251876)
chr8 (15-132)||(32303687-32303805)
chr8 (15-132)||(45446340-45446458)
chr8 (15-132)||(32020103-32020221)
chr8 (15-132)||(41709662-41709780)
chr8 (16-127)||(13407038-13407150)
chr8 (15-121)||(27103855-27103962)
chr8 (15-132)||(31731949-31732067)
chr8 (15-124)||(34101401-34101511)
chr8 (15-121)||(6386472-6386579)
chr8 (16-123)||(40388935-40389042)
chr8 (15-132)||(31513685-31513803)
chr8 (15-114)||(5968966-5969066)
chr8 (16-108)||(22999167-22999259)
chr8 (16-132)||(45113941-45114057)
chr8 (36-127)||(6460154-6460245)
chr8 (16-95)||(7591550-7591629)
chr8 (15-121)||(34063024-34063131)
chr8 (15-97)||(37664385-37664468)
chr8 (15-127)||(29672425-29672538)
chr8 (16-97)||(30501066-30501147)
chr8 (15-97)||(4052402-4052483)
chr8 (16-95)||(10466987-10467066)
chr8 (36-127)||(16595272-16595363)
chr8 (16-95)||(37474642-37474721)
chr8 (16-95)||(41548541-41548620)
chr8 (15-112)||(29563328-29563426)
chr8 (16-97)||(30543125-30543207)
chr8 (16-80)||(16485912-16485976)
chr8 (53-132)||(17805575-17805654)
chr8 (36-97)||(37861801-37861863)
chr8 (25-127)||(25478138-25478236)
chr8 (36-108)||(4599572-4599644)
chr8 (16-114)||(12753428-12753527)
chr8 (25-95)||(10656798-10656868)
chr8 (54-132)||(21272598-21272676)
chr8 (36-73)||(9624182-9624219)
chr8 (25-97)||(14005156-14005229)
chr8 (51-112)||(17520507-17520568)
chr8 (25-73)||(39642828-39642876)
[»] chr4 (66 HSPs)
chr4 (16-124)||(3649533-3649641)
chr4 (16-132)||(22318465-22318581)
chr4 (16-124)||(26083235-26083343)
chr4 (16-124)||(9807053-9807161)
chr4 (13-132)||(49152177-49152297)
chr4 (15-132)||(21579914-21580032)
chr4 (15-132)||(29785617-29785735)
chr4 (15-132)||(55065413-55065530)
chr4 (15-121)||(56154520-56154627)
chr4 (15-132)||(20802611-20802729)
chr4 (15-132)||(24002226-24002344)
chr4 (15-132)||(43640987-43641105)
chr4 (16-132)||(14296485-14296602)
chr4 (16-132)||(2786853-2786969)
chr4 (16-127)||(14314738-14314850)
chr4 (36-124)||(50729627-50729715)
chr4 (15-106)||(53200724-53200815)
chr4 (25-114)||(6776484-6776574)
chr4 (15-132)||(23521768-23521886)
chr4 (16-86)||(39078596-39078666)
chr4 (16-121)||(37695622-37695727)
chr4 (16-93)||(44324423-44324500)
chr4 (25-132)||(37865641-37865749)
chr4 (16-132)||(50178574-50178690)
chr4 (16-132)||(52949610-52949725)
chr4 (15-97)||(33552922-33553005)
chr4 (16-124)||(21202636-21202745)
chr4 (16-108)||(7555038-7555130)
chr4 (16-92)||(29592824-29592900)
chr4 (16-112)||(47642572-47642668)
chr4 (16-132)||(50186417-50186533)
chr4 (36-127)||(7001748-7001839)
chr4 (16-127)||(30942682-30942793)
chr4 (25-132)||(37931809-37931916)
chr4 (16-132)||(33177113-33177230)
chr4 (25-97)||(47361499-47361572)
chr4 (36-132)||(52319214-52319311)
chr4 (25-108)||(20518112-20518196)
chr4 (27-132)||(12600774-12600880)
chr4 (15-87)||(24210251-24210324)
chr4 (36-93)||(52673756-52673813)
chr4 (25-97)||(53343567-53343640)
chr4 (15-86)||(11055977-11056048)
chr4 (15-132)||(9512420-9512538)
chr4 (15-83)||(2725212-2725281)
chr4 (25-97)||(29616093-29616166)
chr4 (15-95)||(54542915-54542996)
chr4 (36-112)||(7381189-7381265)
chr4 (25-132)||(38486347-38486450)
chr4 (39-127)||(47669208-47669296)
chr4 (16-87)||(985217-985287)
chr4 (17-76)||(10586989-10587047)
chr4 (25-87)||(36743778-36743841)
chr4 (15-73)||(50727993-50728052)
chr4 (15-73)||(50736007-50736066)
chr4 (15-113)||(55593792-55593891)
chr4 (23-73)||(10184877-10184927)
chr4 (16-121)||(44649245-44649348)
chr4 (25-62)||(41711806-41711843)
chr4 (17-73)||(46680592-46680649)
chr4 (24-87)||(20694304-20694368)
chr4 (25-73)||(32181211-32181259)
chr4 (25-61)||(32858283-32858319)
chr4 (16-87)||(34929848-34929920)
chr4 (16-76)||(42772703-42772763)
chr4 (25-97)||(43189852-43189924)
[»] chr2 (44 HSPs)
chr2 (16-112)||(6896074-6896170)
chr2 (16-124)||(30712751-30712859)
chr2 (15-132)||(9733017-9733135)
chr2 (15-132)||(13829324-13829441)
chr2 (15-132)||(40692190-40692308)
chr2 (15-121)||(34338706-34338813)
chr2 (15-132)||(5278921-5279039)
chr2 (15-132)||(18685721-18685839)
chr2 (15-132)||(32497800-32497918)
chr2 (15-132)||(33366495-33366613)
chr2 (16-132)||(3913548-3913664)
chr2 (15-121)||(30326418-30326525)
chr2 (15-132)||(17540599-17540717)
chr2 (15-132)||(35114670-35114788)
chr2 (15-97)||(33889163-33889246)
chr2 (15-132)||(37003955-37004074)
chr2 (15-132)||(2085957-2086075)
chr2 (15-132)||(4641401-4641519)
chr2 (15-132)||(19513776-19513894)
chr2 (15-132)||(39461199-39461317)
chr2 (53-122)||(26981816-26981885)
chr2 (15-110)||(2645173-2645269)
chr2 (15-121)||(16104170-16104277)
chr2 (25-132)||(28824654-28824761)
chr2 (16-113)||(1247060-1247157)
chr2 (25-121)||(7258792-7258889)
chr2 (15-132)||(30798576-30798692)
chr2 (16-95)||(32766593-32766672)
chr2 (25-122)||(18793358-18793456)
chr2 (36-121)||(37308552-37308638)
chr2 (36-124)||(38993179-38993264)
chr2 (16-132)||(16177971-16178085)
chr2 (28-97)||(27462900-27462969)
chr2 (25-132)||(26418808-26418916)
chr2 (17-132)||(42365462-42365578)
chr2 (15-132)||(42706243-42706362)
chr2 (15-85)||(44284561-44284632)
chr2 (40-113)||(16062188-16062261)
chr2 (41-113)||(40832584-40832656)
chr2 (25-71)||(10399967-10400013)
chr2 (25-97)||(11114793-11114865)
chr2 (16-97)||(12939388-12939471)
chr2 (23-59)||(38623395-38623431)
chr2 (16-132)||(41934467-41934583)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-132)||(5534-5650)
[»] chr3 (39 HSPs)
chr3 (16-132)||(51925290-51925406)
chr3 (17-132)||(51259863-51259979)
chr3 (15-132)||(28675676-28675794)
chr3 (36-132)||(22484845-22484941)
chr3 (15-97)||(34026588-34026671)
chr3 (25-132)||(50386547-50386654)
chr3 (15-132)||(4851537-4851655)
chr3 (15-132)||(26282468-26282586)
chr3 (16-132)||(3864756-3864873)
chr3 (16-121)||(31883104-31883209)
chr3 (16-132)||(3867731-3867842)
chr3 (16-132)||(25860503-25860620)
chr3 (15-114)||(12349252-12349352)
chr3 (15-121)||(5442188-5442295)
chr3 (15-121)||(25927408-25927515)
chr3 (25-126)||(21221451-21221553)
chr3 (15-132)||(53557876-53557994)
chr3 (16-132)||(3964175-3964292)
chr3 (15-95)||(44116862-44116943)
chr3 (16-108)||(10747128-10747220)
chr3 (15-97)||(20609729-20609812)
chr3 (15-121)||(53046722-53046829)
chr3 (15-132)||(2134956-2135074)
chr3 (15-132)||(29584761-29584879)
chr3 (15-132)||(43175455-43175573)
chr3 (16-132)||(33364860-33364976)
chr3 (36-132)||(21373826-21373914)
chr3 (27-97)||(42636496-42636567)
chr3 (26-127)||(24571173-24571274)
chr3 (16-70)||(44267691-44267745)
chr3 (16-132)||(38213240-38213357)
chr3 (26-110)||(40094411-40094496)
chr3 (16-73)||(41694983-41695040)
chr3 (16-63)||(25954407-25954454)
chr3 (16-79)||(28625001-28625064)
chr3 (16-114)||(29645970-29646069)
chr3 (16-127)||(45690983-45691093)
chr3 (37-73)||(26847271-26847307)
chr3 (16-64)||(54622878-54622926)
[»] chr6 (32 HSPs)
chr6 (15-108)||(3932933-3933027)
chr6 (15-132)||(17867720-17867838)
chr6 (15-132)||(17877503-17877621)
chr6 (15-132)||(32409978-32410096)
chr6 (25-132)||(10324247-10324355)
chr6 (16-132)||(10959886-10960002)
chr6 (16-127)||(15277407-15277519)
chr6 (15-127)||(18597284-18597396)
chr6 (25-132)||(24203248-24203356)
chr6 (25-124)||(14925592-14925691)
chr6 (25-132)||(18057405-18057512)
chr6 (16-114)||(17443166-17443264)
chr6 (16-132)||(29814750-29814867)
chr6 (26-132)||(11212142-11212249)
chr6 (15-132)||(24242549-24242667)
chr6 (16-112)||(14808127-14808223)
chr6 (16-95)||(32132507-32132587)
chr6 (15-121)||(2614792-2614899)
chr6 (16-127)||(10485049-10485159)
chr6 (53-132)||(28502344-28502423)
chr6 (15-132)||(15277063-15277181)
chr6 (17-97)||(167051-167132)
chr6 (36-129)||(32859940-32860033)
chr6 (53-132)||(4494263-4494342)
chr6 (25-132)||(23636109-23636216)
chr6 (15-97)||(34176750-34176833)
chr6 (16-132)||(11675501-11675618)
chr6 (25-108)||(31870236-31870319)
chr6 (53-132)||(32805363-32805442)
chr6 (16-122)||(29054254-29054359)
chr6 (15-114)||(3259581-3259686)
chr6 (36-68)||(7396270-7396302)
[»] scaffold0050 (1 HSPs)
scaffold0050 (23-132)||(43050-43159)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-132)||(101834-101942)
[»] scaffold0729 (1 HSPs)
scaffold0729 (25-114)||(4682-4772)
[»] scaffold0650 (1 HSPs)
scaffold0650 (23-93)||(1744-1814)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-132)||(23462-23580)
[»] scaffold0208 (1 HSPs)
scaffold0208 (25-132)||(2441-2549)
[»] scaffold0098 (1 HSPs)
scaffold0098 (15-132)||(51324-51442)
[»] scaffold0027 (1 HSPs)
scaffold0027 (16-132)||(15057-15174)
[»] scaffold0360 (1 HSPs)
scaffold0360 (15-97)||(15470-15553)
[»] scaffold0169 (2 HSPs)
scaffold0169 (15-132)||(12629-12747)
scaffold0169 (15-132)||(18147-18265)
[»] scaffold0181 (1 HSPs)
scaffold0181 (15-93)||(19183-19262)
[»] scaffold0957 (1 HSPs)
scaffold0957 (16-121)||(2589-2695)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 6029464 - 6029572
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||     
T  6029464 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgctgtcca 6029563  T
Q  116 gtacttact 124  Q
    |||||||||    
T  6029564 gtacttact 6029572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 15540053 - 15540164
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||| ||| |||||||||||||     
T  15540053 caaaaatcatataaaacaaaaaattattcaataccataaaaacttgtcatgtgttgttatgccttgtgttgtgctgttctgcattgtactgttctgtcca 15540152  T
Q  116 gtacttactgtt 127  Q
    ||||||||||||    
T  15540153 gtacttactgtt 15540164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 42510537 - 42510419
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  42510537 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 42510438  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  42510437 cagtacttactgttttgca 42510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 844886 - 845004
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  844886 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 844985  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  844986 cagtacttgctgttttgca 845004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11772795 - 11772911
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||| |||||| ||||||||||||||||||||||| || |||||||||||||| |||| ||| || ||||||| |||||     
T  11772795 caaaaatcgtataaaacaaaaaataattcaaaaccataaaaatttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtcca 11772894  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  11772895 gtacttaccgttttgca 11772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 24339809 - 24339917
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||| ||| || |    
T  24339809 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgc 24339908  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  24339909 tgttttgca 24339917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50304662 - 50304546
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| |     
T  50304662 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtact 50304563  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  50304562 gtacttgctgttttgca 50304546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 38087181 - 38087275
Alignment:
Q  38 attattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||| || ||||||| ||||| ||||||| |||| ||||    
T  38087181 attattcaatgccataaaaatttgtcctgtgctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgca 38087275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50540355 - 50540238
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||| |||||| ||||| ||||||||| |||| ||||||||||| || | |||||||| ||||||| | |||||||||||||||     
T  50540355 caaaaatcatataaaacaacaaattactcaatgccataaaaaatttgccctgtgctgttctgacgtgtgttgtactgttctatcttatactgttctgtca 50540256  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  50540255 agtacttactgttttgca 50540238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10384378 - 10384262
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||| ||| ||||||||| ||||||||||||||| || || ||||||| || ||     
T  10384378 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtccagtgttgttttgccctgtgttgtgctgttcggtcttgtactgttatgccca 10384279  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  10384278 gtacttactgttttgca 10384262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 25539866 - 25539750
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||  |||||||||||||||||||||| || |||||||||||||  |||| ||| || ||||||| |||||     
T  25539866 caaaaatcgtataaaacaaaaaattattcaaagccataaaaatttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtcca 25539767  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  25539766 gtacttaccgttttgca 25539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 31004143 - 31004027
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| | |||||| ||| |||||||| | || ||||||||||| |     
T  31004143 caaaaatcctataaaacaaaaaattattcaatgccataaaaatttgtcctgtgatgttctcccttgtattgcgctgttctttcttgtactgttctgtaca 31004044  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  31004043 gtacttgctgttttgca 31004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 6711208 - 6711315
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  6711208 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttgtgttgtactgttctattttgtactgttctgtc 6711307  T
Q  114 cggtactt 121  Q
    | ||||||    
T  6711308 cagtactt 6711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 26118377 - 26118460
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  26118377 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 26118460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 7183930 - 7183812
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||  |||| || |||||||||| ||||||| | || ||||||||||||    
T  7183930 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtattgttctgtcttgtgttgtactgttctatcttgtactgttctgtc 7183831  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  7183830 cagtacttactgttttgca 7183812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 12890250 - 12890140
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  12890250 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 12890151  T
Q  114 cggtacttact 124  Q
      |||||||||    
T  12890150 tagtacttact 12890140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16386866 - 16386748
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||||| |||| ||||||| | || ||||||||||||    
T  16386866 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtattgtactgttctatcttgtactgttctgtc 16386767  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  16386766 caatacttgctgttttgca 16386748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16451139 - 16451021
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||||| || |||| |||||||| || |||| | || ||||||||||||    
T  16451139 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgccatgtgttgtactattctatcttgtactgttctgtc 16451040  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  16451039 cagtacttactgttttgca 16451021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 42512933 - 42513038
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||   ||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| |     
T  42512933 caaaaatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtact 42513032  T
Q  116 gtactt 121  Q
    ||||||    
T  42513033 gtactt 42513038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 39281905 - 39281789
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  ||||||||||||  |||| ||| ||||| |||| |||| ||| ||||||||||||||||| | ||||||| ||||||||     
T  39281905 caaaaatcgtataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgttatgcattgtgttgtgctgttctatcttatactattctgtcca 39281806  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  39281805 gtacttactgttttgca 39281789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 41972914 - 41972806
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| | ||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||| |||||| |    
T  41972914 tataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 41972815  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41972814 tgttttgca 41972806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 45491037 - 45491156
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||  |||||| | ||||| |||||||||    
T  45491037 tcaaaaatcgtataaaacaaaaaattactcaatgccatacaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttatattgttctgtc 45491136  T
Q  114 cggtacttactgttctgcat 133  Q
    | ||| || ||||| |||||    
T  45491137 cagtaattgctgttttgcat 45491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 1351597 - 1351714
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||| | ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  1351597 tcaaaaatcatataaaacaaaaaat-actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 1351695  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  1351696 aagtacttactgttttgca 1351714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 46154912 - 46154794
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||||||||||||  |||||||| |||||| ||||| ||| || |||||||| | ||||||| | |||||||||| ||||    
T  46154912 tcaaaaatcttataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgccgttatgtcttgtgttatactgttctatcttatactgttttgtc 46154813  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  46154812 cagtacttactgttttgca 46154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 17887958 - 17887841
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| |||||||||||||  |||||| | || |||| ||||||||    
T  17887958 caaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactattctgtcc 17887859  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  17887858 cgtacttactgttttgca 17887841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28340465 - 28340578
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||  ||||| ||| ||||| ||||||||||||| ||||||| | || ||||||||||||    
T  28340465 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtc 28340564  T
Q  114 cggtacttactgtt 127  Q
    |  |||||||||||    
T  28340565 caatacttactgtt 28340578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 45658832 - 45658755
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||||| |||||| || || ||||||||||||||||    
T  45658832 caaaaatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtgctattctgtcttgtgttgtgctgtt 45658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 6144149 - 6144245
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||| |||| |||||| ||||||| ||  || | || |||||||||||    
T  6144149 caaaaatcatataaaacagaaaattattcaataccataaaaatttgtcttgtgatgttctgccttatgttgtgttgccctatcttgtactgttctgt 6144245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 16476327 - 16476434
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  |||||||||||| ||||| ||||||||| |||| |||| |||||| ||| ||| |||||| | ||||| |||| ||||| |||||||||    
T  16476327 tataaaacataaaattattcaatgccatacaaatttgtcatgtggtgttatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttact 16476426  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  16476427 gttttgca 16476434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 26764978 - 26765069
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||| | ||||||||||||||| |  |||| |||||||||||||| |||||| | || ||||||||||||| |||||||||||| ||||    
T  26764978 attcaatgctataaaaatttgtcctatattgttctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgca 26765069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 51264497 - 51264407
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| ||||||||| ||||||||||||| || || |||||||||| ||||||| | || |||||||||||||    
T  51264497 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgtcttgtgttgtactgttctatcttgtactgttctgtcc 51264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 17327812 - 17327921
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||  |||||||| ||||||||| || |||| |||||||| |||| ||||||| | ||||||||||||||||    
T  17327812 caaaaatcgtataaaacaacaaattactcaacgccataaaaaatttgtcctatgttgttctgccttgtattgtactgttctatcttatactgttctgtcc 17327911  T
Q  115 ggtacttact 124  Q
      ||||||||    
T  17327912 aatacttact 17327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 38663144 - 38663027
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||| | ||||| |||||| | || ||||||| ||| |    
T  38663144 tcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttatattgtgttgttctttcttgtactgttttgtac 38663045  T
Q  115 ggtacttactgttctgca 132  Q
     |||||| ||||| ||||    
T  38663044 tgtacttgctgttttgca 38663027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 51703334 - 51703442
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||  |||||||||||||||||| ||||| | | || ||||||| ||||| |||||| |    
T  51703334 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgccttgtgttgttctgttatatcttgtactgttttgtccagtacttgc 51703433  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  51703434 tgttttgca 51703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 35387473 - 35387591
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| | ||||||||||| ||||||| | || || | || ||||    
T  35387473 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctaccttgtgttgtactgttctatcttgtattattatgtc 35387572  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35387573 cagtacttgctgttttgca 35387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 44738203 - 44738321
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | |||||||||||  |||||| | || ||||||||||||    
T  44738203 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttctactgttctgtc 44738302  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  44738303 tagtacttgctgttttgca 44738321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 41968021 - 41968129
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||| |  ||||||| ||||||| |||  ||||  ||||||||||||| |||||||| || ||||||||||||| | ||||||    
T  41968021 tataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgttccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttac 41968120  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41968121 tgttttgca 41968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 30105842 - 30105925
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| | ||| |||||||| |||||||| ||| |||| ||||||||||||| |||||||||    
T  30105842 tcaaaaatcgtataaaacaaaaaattacttaatgccataaaaaatttgtccagtgttgttctgccttgtgttgtactgttctgt 30105925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 13994237 - 13994310
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtg 88  Q
    |||||| |||||||||||  ||||||||||||| |||| |||||||||| |||| |||| |||||||| |||||    
T  13994237 caaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttctgccttgtattgtg 13994310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 16437374 - 16437317
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgt 72  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  16437374 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtactgt 16437317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 21071726 - 21071661
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgct 90  Q
    |||||||||| ||||||||||||   ||||||||||||| |||  |||| ||||||||||||||||    
T  21071726 tataaaacaaaaaattattcaatgtaataaaaatttgtcatgtattgttctgccttgtgttgtgct 21071661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 51374486 - 51374558
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| || ||||||||||||| ||||||| |||| | | ||||||| |  ||||||||||||||||||||    
T  51374486 tataaaataaaaaattattcaatatcataaaattttgccatctgctgttctaacttgtgttgtgctgttctgt 51374558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 20495063 - 20495134
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||||||| |||||| |||||  ||||||| ||||||| ||||||||| |||||| |||||| |||||||    
T  20495063 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttatgttgtactgttct 20495134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34663939 - 34663856
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| | ||| |||| ||||||||||| |||||| || | |||| |||||| |||||||||    
T  34663939 tcaaaaatcatataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctcttctaccttatgttgtactgttctgt 34663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 50382565 - 50382608
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat 58  Q
    ||||||| |||||||||||| | |||||||||||||||||||||    
T  50382565 tcaaaaatcatataaaacaaaatattattcaataccataaaaat 50382608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 8838929 - 8838833
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| | ||||||||||||  |||| | || |  ||||||||||| |||||||| |||||| ||| ||||  ||| |||||||| ||||    
T  8838929 aaattattcaatgctataaaaatttgttatgtgtttttctatcttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgca 8838833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 37148668 - 37148784
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||     
T  37148668 caaaaagaatataaaataagaaattattcaataccataaaaatttgtcctgtgctgttataccttgtgttgtgctgttctgtattatactgttttgtcca 37148767  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  37148768 gtacttactgttttgca 37148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18470522 - 18470630
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||||||||||| |||||||||| ||||||     
T  18470522 caaaaagcatataaaacaagaaattattcaataccataaaaatttgttctgtgctgttatgtcttgtattgtgctgttctgcattatactgtgctgtcca 18470621  T
Q  116 gtacttact 124  Q
    |||||||||    
T  18470622 gtacttact 18470630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 31770684 - 31770782
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  31770684 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgt 31770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 32528718 - 32528608
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||| |||||| ||||||| | || ||||||||||||    
T  32528718 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtc 32528619  T
Q  114 cggtacttact 124  Q
    | |||||||||    
T  32528618 cagtacttact 32528608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 40182467 - 40182354
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||| | || || |||||||||    
T  40182467 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttttgccttgtgttgtactgttctttcttgtattgttctgtc 40182368  T
Q  114 cggtacttactgtt 127  Q
    | |||||| |||||    
T  40182367 cagtacttgctgtt 40182354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 41790556 - 41790668
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | ||||||||||||||||    
T  41790556 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcatgtgttgttctgccttgtgttgtactgttctattttatactgttctgtcc 41790655  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  41790656 agtacttactgtt 41790668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 6284392 - 6284505
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||  ||||||||||||| ||||||| | ||||| |||||||||    
T  6284392 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgtactgccttgtgttgtactgttctatcttatattgttctgtc 6284491  T
Q  114 cggtacttactgtt 127  Q
    | |||||| |||||    
T  6284492 cagtacttgctgtt 6284505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 7725903 - 7726019
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||||| | || || | |||||||||||| ||| |||| || ||||||| ||||      
T  7725903 caaaaatcgtataaaacaaaaaattattcaattccataaaaatttgtcctatactattctaccttgtgttgtgatgtactgtcttgtactgttatgtcta 7726002  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  7726003 gtacttactgttttgca 7726019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 7770373 - 7770489
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||||| || || ||||||||||| |||||||| || |||  || |||||     
T  7770373 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctattctgtcttgtgttgtgttgttctgtcttgtacgattatgtcca 7770472  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  7770473 gtacttgctgttttgca 7770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 32093083 - 32093183
Alignment:
Q  24 atataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    ||||||||||  ||| | |||||||||||||||||||||  ||||||||| ||||||||||| || |||||||| |  ||||||||||||| ||||||||    
T  32093083 atataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttctgccttgtgttatgttgttctgtctcttactgttctgtccagtacttac 32093182  T
Q  124 t 124  Q
    |    
T  32093183 t 32093183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 4689801 - 4689908
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||  |||||||||||||| |||| |||| |||||| ||||||| |||||||| || ||||||| |||||  ||||| ||    
T  4689801 tataaaacaaaaaattattcaatgtcataaaaatttgtcatgtgttgttctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgct 4689900  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  4689901 gttttgca 4689908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 29241381 - 29241298
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  29241381 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 29241298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2351683 - 2351565
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | || ||||||| |||||| ||||| ||||||||| ||| ||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  2351683 tcaaaaatcgtacaaaacaaaaaattactcaatgccataaaaaatttatcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 2351584  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  2351583 cagtacttgctgttttgca 2351565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 20119776 - 20119656
Alignment:
Q  15 tcaaaaagcatataaaaca---agaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctg 111  Q
    ||||||| |||||||||||   | | |||||||||| | || |||||||||| ||| ||||| ||||||||||||||||||||| | || ||||||||||    
T  20119776 tcaaaaatcatataaaacaaacaaatattattcaatgctattaaaatttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctg 20119677  T
Q  112 tccggtacttactgttctgca 132  Q
    |||  ||||||||||| ||||    
T  20119676 tccaatacttactgttttgca 20119656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 35701280 - 35701162
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||| | ||||||||| ||||||||||| | || ||||||||||||| ||||||| | || ||||||||||||    
T  35701280 tcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttattctgccttgtgttgtactgttctatcttgtactgttctgtc 35701181  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35701180 cagtacttgctgttttgca 35701162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 39918509 - 39918399
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||||| |||||| |||||||||||| |||| | ||||||||||| ||||||| | || |||||||||||||    
T  39918509 caaaaatcgtataaaacataaaattactcaatactataaaatatttgtcctgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgtcc 39918410  T
Q  115 ggtacttactg 125  Q
     ||||||||||    
T  39918409 agtacttactg 39918399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24181727 - 24181800
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  24181727 tataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 24181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 3735359 - 3735263
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||||| ||||||| |||| | || |||||||||||    
T  3735359 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctattctttcttgtactgttctgt 3735263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 4818243 - 4818351
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||  ||||||| | || ||||||||||||| |||||| |    
T  4818243 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgcactgttctatcttgtactgttctgtccagtacttgc 4818342  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  4818343 tgttttgca 4818351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 5673146 - 5673034
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | |||||||| ||||||||| || |||| ||||||||||||||||||| | | || ||||||||||||     
T  5673146 caaaaatcgtataaaacaaaaaattactcattgccataaaatatttgtcctttgatgttatgccttgtgttgtgctgttatatcttgtactgttctgtca 5673047  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  5673046 agtacttactgtt 5673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 34794880 - 34794772
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| ||| ||||| ||| || |||| |||| ||||||||||||| ||||||| | || |||||||||||||  |||||||    
T  34794880 tataaaacaaaaaattattcaatgccacaaaaaatttatcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttac 34794781  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  34794780 tgttttgca 34794772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 7523135 - 7523056
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||  ||||| ||||| ||||    
T  7523135 aaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgca 7523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8136832 - 8136729
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| | |||| ||||| |||||||||  |||||||||| |||| ||||||||||||| ||||||| | || |||| |||||||| ||||||||    
T  8136832 tataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttac 8136733  T
Q  124 tgtt 127  Q
    ||||    
T  8136732 tgtt 8136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 35955000 - 35954917
Alignment:
Q  31 acaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||| ||||||||||||||||||||||||| |||  | || |||||||||||| ||||||||||||| ||  ||||||||||||    
T  35955000 acaaaaaattattcaataccataaaaatttatccaatactattttgccttgtgatgtgctgttctgtcttgcactgttctgtcc 35954917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 5571736 - 5571806
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgtt 85  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||||||||    
T  5571736 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgtt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 39788194 - 39788112
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| |||||| ||||||||||| |||||||||| ||||||||| ||| || |||||| |||||||||    
T  39788194 caaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcatgtgctgttctgcattatgttgtactgttctgt 39788112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 24036232 - 24036118
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||  |||||||||| |||| |||| || ||| |||||||||||||||| || |||||||| || |     
T  24036232 caaaaatcgtataaaacaaaaaattattcaatgtca--aaaatttgtcatgtgttgttctgtcttatgttgtgctgttctgtcttgtactgttcagtaca 24036135  T
Q  116 gtacttactgttctgca 132  Q
    ||||||| |||| ||||    
T  24036134 gtacttattgttttgca 24036118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 22493512 - 22493611
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| ||||| |||||||||| | |||||||||||| | |||||| ||  ||||||||||||    
T  22493512 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgttctgtgctgttctaccttgtgttgtgttattctgtcttgcactgttctgtcc 22493611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 41459592 - 41459509
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| |||| ||| ||| ||||||||||||| | ||||||||||| |||||||||    
T  41459592 tcaaaaatcgtataaaacaaaaaattactcaatgccattaaatttttgtcctgtgctgttctaccttgtgttgtactgttctgt 41459509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 11963344 - 11963226
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| |  |||||| ||||| ||||||||| |||||| |||| | || ||| ||||||||| ||||||| | || ||||||||||||    
T  11963344 tcaaaaatcgtataaaatacaaaattactcaatgccataaaaaatttgtcatgtgttattctgctttgtgttgtactgttctatcttgtactgttctgtc 11963245  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  11963244 cagtacttgctgttttgca 11963226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31644447 - 31644369
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||| |||||||||||  ||||||||||||  |||||||||||||| |||| |||| | |||||| ||||||| ||||    
T  31644447 aaaaatcatataaaacataaaattattcaatgtcataaaaatttgtcttgtgttgttctaccttgtattgtgctattct 31644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 31880179 - 31880252
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||| ||||||||||||  ||||||| ||||||| ||| ||||| ||||||||||||| |||||||||    
T  31880179 tataatacaaaaaattattcaatgtcataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctgt 31880252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 700697 - 700767
Alignment:
Q  18 aaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||| |||||||||||| |||||| ||| | ||||||||| |||||| ||||||||| | |||||||||||    
T  700697 aaaatcatataaaacaaaaaattactcattgccataaaaattttgtcatgtgctgttctaccttgtgttgt 700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 14011549 - 14011587
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtc 63  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  14011549 tataaaacaagaaattgttcaataacataaaaatttgtc 14011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 22432435 - 22432481
Alignment:
Q  51 ataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||||||||| |||| |||| | |||||||||||||||||||||    
T  22432435 ataaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctgt 22432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28090613 - 28090724
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||||  |||||| ||||||||||| ||||| |||| || ||||| ||||||| | ||||  |||||||||    
T  28090613 tcaaaaatcgtataaaacaaaaaattactcaataatataaaaaatttgtcctgtactgttctgccgtgagttgtactgttctatcttat--tgttctgtc 28090710  T
Q  114 cggtacttactgtt 127  Q
    |  |||||| ||||    
T  28090711 caatacttaatgtt 28090724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 21739264 - 21739367
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| ||||||  |||| |||||||| ||||||||||| ||||     |||||||||| ||||||| | ||||| |||| ||||| |||||| |    
T  21739264 tataaaacaaaaaattacacaatgccataaaaaatttgtcctgttctgt-----cttgtgttgtactgttctatcttatattgttatgtccagtacttgc 21739358  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  21739359 tgttttgca 21739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 329476 - 329360
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| ||| |||||||||||||     
T  329476 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtcca 329377  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  329376 gtacttactgttttgca 329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 48445527 - 48445417
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||| || ||| ||||||| |||||     
T  48445527 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttatgcattgtactgttttgtcca 48445428  T
Q  116 gtacttactgt 126  Q
    |||||||||||    
T  48445427 gtacttactgt 48445417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18470691 - 18470573
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  18470691 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 18470592  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18470591 cagtacttgctgttttgca 18470573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 36769657 - 36769775
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  36769657 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 36769756  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  36769757 cagtacttactgttttgca 36769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 3892126 - 3892232
Alignment:
Q  27 taaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactg 125  Q
    |||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  3892126 taaaacaaaaaattactcaatgccataaaaaatttgtcatatgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactg 3892225  T
Q  126 ttctgca 132  Q
    || ||||    
T  3892226 ttttgca 3892232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 10932645 - 10932763
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| |||| |||||||| ||||||| | || ||||||||||||    
T  10932645 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccgtgtgttgtactgttctatcttgtactgttctgtc 10932744  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  10932745 cagtacttactgttttgca 10932763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 11321973 - 11322091
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||||| | || ||||||||||||    
T  11321973 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtc 11322072  T
Q  114 cggtacttactgttctgca 132  Q
    || ||||||||||| ||||    
T  11322073 cgatacttactgttttgca 11322091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 47947767 - 47947649
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  47947767 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 47947668  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  47947667 cagtacttgctgttttgca 47947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 47953197 - 47953079
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  47953197 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 47953098  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  47953097 cagtacttgctgttttgca 47953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 26994323 - 26994431
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || | ||||||||||| |||||| |    
T  26994323 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttc 26994422  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  26994423 tgttttgca 26994431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 3922791 - 3922909
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||| || ||||| |||||||| ||||||||||||||||| ||||||||||||| ||| ||| | || ||||||||||||    
T  3922791 tcaaaaatcgtataaaacaaaaaaatactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactggtctatcttgtactgttctgtc 3922890  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  3922891 cagtacttgctgttttgca 3922909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32873857 - 32873975
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  32873857 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 32873956  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32873957 cagtacttgctgttttgca 32873975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 34295493 - 34295609
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||| |||||| | || ||||||| ||| |     
T  34295493 caaaaatcatataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttgtact 34295592  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  34295593 gtacttgctgttttgca 34295609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 11250629 - 11250558
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgtt 85  Q
    ||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  11250629 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgtt 11250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 11822212 - 11822121
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||| ||||||||||||||||| || |||| |||||||||||||| |||||| | |||||||||| ||| | |||||||||||| ||||    
T  11822212 attcaatgccataaaaatttgtcctatgttgttctgccttgtgttgtgttgttctattttatactgttatgttcagtacttactgttttgca 11822121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 30599106 - 30599209
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| |||||  ||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||| ||||||||    
T  30599106 tataaaacaacaaattactcaatttcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 30599205  T
Q  124 tgtt 127  Q
    ||||    
T  30599206 tgtt 30599209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 43368198 - 43368091
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||   ||||||||||||| ||||||||| | |||||| |||||||||||| | || ||||||||||| | |||||| ||    
T  43368198 tataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 43368099  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  43368098 gttttgca 43368091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 43214013 - 43214091
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||| | |||||||||| |||| |||||||  |||||||||||||||||||||||| | |||||||||||||||||    
T  43214013 tcaaaaatcctataaaacaaaaaatgattcaatgtcataaaaatttgtcctgtgctgttctaccttgtgttgtgctgtt 43214091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 12982300 - 12982203
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||| ||||||| | || ||||||||| ||| ||||||    
T  12982300 tataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtactt 12982203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 21784877 - 21784760
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| |||||| ||||| |||| ||||||||||||| ||||||| | || ||||||| |||||    
T  21784877 caaaaatcgtataaaacataaaattactcaatgccataaaagatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtcc 21784778  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  21784777 agtacttactgttttgca 21784760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26652872 - 26652767
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||||| |||||||||| | | |||||||||| ||| |     
T  26652872 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctgttttttcttatactgttatgtact 26652773  T
Q  116 gtactt 121  Q
    ||||||    
T  26652772 gtactt 26652767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 30849335 - 30849452
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||||  |||||||||| |||| || |||||||||| ||||||| | || ||||||||||||     
T  30849335 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgttgttctgtcttgtgttgtactgttctatcttgtactgttctgtca 30849434  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  30849435 agtacttactgttttgca 30849452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 48894723 - 48894626
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||| |||||||||| ||||||||||| |||||| || || ||||||| ||||    
T  48894723 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtccagtgctgttttaccttgtgttgtactgttcggtcttgtactgttatgtc 48894626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22724121 - 22724229
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||| || |||| |||| |||||| ||||||| ||| || | ||||||| || ||||||    
T  22724121 caaaaatcatataatacagaaaattattcaataccataaaaatttatcttgtgttgttctgccttatgttgtgttgtcctatcttatactattttgtccg 22724220  T
Q  116 gtacttact 124  Q
    ||| |||||    
T  22724221 gtatttact 22724229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22724620 - 22724728
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  |||||||||||||||| |||||||| || |||| |||| |||||| ||||||| | |||| | || |||||||||||||     
T  22724620 caaaaatcatataatacagaaaattattcaataccagaaaaatttatcttgtgttgttctgccttatgttgtgatattctatcttgtactgttctgtcca 22724719  T
Q  116 gtacttact 124  Q
    |||||||||    
T  22724720 gtacttact 22724728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 41665672 - 41665775
Alignment:
Q  24 atataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||| || ||| || ||||||||||| || | || || |||| ||| | ||||||||    
T  41665672 atataaaacagaaaattattcaataccataaaaatttgtcttgtgctattatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttac 41665771  T
Q  124 tgtt 127  Q
    ||||    
T  41665772 tgtt 41665775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 26371897 - 26372010
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||| ||||||||||| |||| |||| ||  || |||||| ||||||| | || ||||||| ||||    
T  26371897 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgatgttctgttttatgttgtactgttctatcttgtactgttatgtc 26371996  T
Q  114 cggtacttactgtt 127  Q
    | ||||||||||||    
T  26371997 cagtacttactgtt 26372010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 43189332 - 43189449
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | ||| |||||| |||||| ||||| |||||||| ||||||| ||  || || ||||||||||||| ||||||| | |||||||||| |||||    
T  43189332 caaaaatcgtatgaaacaacaaattactcaatgccataaaaaatttgtcatgcactattctgccttgtgttgtactgttctatcttatactgttatgtcc 43189431  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  43189432 agtacttactgttttgca 43189449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 1363634 - 1363538
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||||||||| ||||||||||||||| |||| |||| | |||| || |||| |||||| | ||||| |||| ||||| ||||||    
T  1363634 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgttctaccttctgatgtgttgttctatcttatattgttatgtccagtactt 1363538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 9913531 - 9913435
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| | |||||| ||||| |||||| | || |||||||||||    
T  9913531 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgt 9913435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 9927219 - 9927123
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| | |||||| ||||| |||||| | || |||||||||||    
T  9927219 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgt 9927123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 41211299 - 41211407
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| |||||||||||||  |||||| | || ||||||| ||||| |||||| |    
T  41211299 tataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtattgttctatcttgtactgttttgtccagtacttgc 41211398  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41211399 tgttttgca 41211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 37966971 - 37966872
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||| ||||||||||||||||||  ||| || || ||| ||||||||||||||| ||| ||||| | || ||||  |||||||||    
T  37966971 tataaaacaaaaaattatttaataccataaaaatttgttatgtactattctgctttgtgttgtgctgttatgtcttatattattatgtctagtacttact 37966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 40753162 - 40753079
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||    
T  40753162 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgctttgtgttgtactgttctgt 40753079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 43158774 - 43158892
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||| ||||| || |||||||||| ||||||| | || ||||| ||| ||    
T  43158774 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgttctgtcttgtgttgtactgttctatcttgtactgctctatc 43158873  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  43158874 tagtacttgctgttttgca 43158892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 46633704 - 46633586
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || |||| || ||||    
T  46633704 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtactattatgtc 46633605  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  46633604 caatacttgctgttttgca 46633586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 1870131 - 1870047
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||| |||||  |||||||| ||| || ||||||||| ||||||||||||| ||||||| |||| |||||||    
T  1870131 tataaaacaaaaaattactcaatgtcataaaaaatttatcatgtgctgttctgccttgtgttgtactgttctatattgtactgtt 1870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 29455957 - 29456013
Alignment:
Q  38 attattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttc 94  Q
    ||||||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||    
T  29455957 attattcaataccataaaagtttgtcatgtgttgttttgccttatgttgtgttgttc 29456013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15035354 - 15035413
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||| ||  |||||||||    
T  15035354 aaaacaaaaaattattcaataccataaaaatttgtcatgtgttgttctgttttgtgttgt 15035413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 16028013 - 16028084
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtg 88  Q
    |||||| ||||||| |||| ||||| || |||||||||||||| |||||| || |||| ||||||||||||||    
T  16028013 caaaaatcatataagacaa-aaattgttaaataccataaaaatctgtcctatgttgttatgccttgtgttgtg 16028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 23349392 - 23349488
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||| ||||||||||||   ||||||||||||| ||||||||| | |||| ||||||  |||||| | || ||||||| |||||  ||||||||    
T  23349392 aaaacaaaaaattattcaatgttataaaaatttgtcatgtgctgttctaccttatgttgttttgttctatcttgtactgttatgtccattacttact 23349488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 26910517 - 26910612
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||||||||||||| |||||| || |||||| | ||||||||| || ||| || |  |||| |||| ||||| |||||||||||| ||||    
T  26910517 aaattattcaataccataaaa-tttgtcttgcgctgttctaccttgtgttatgatgtcctatcctatattgttatgtccagtacttactgttttgca 26910612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 46448742 - 46448810
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||||||| |||||||||||| | ||||||| ||||||  || ||||||||||||| |||| |||||    
T  46448742 tataaaacaaaaaattattcaatgcaataaaaaattgtccaatgttgttttgccttgtcttgtactgtt 46448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 14608501 - 14608560
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||| || |||||||||||| |||||||| || |||| |||||||||||||| ||||||    
T  14608501 aaattgtttaataccataaaagtttgtcctatgttgttatgccttgtgttgtgttgttct 14608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18386532 - 18386414
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| |||| |||| |||||||||||||  |||||| | || ||| ||| ||||    
T  18386532 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctattttgtaccgttttgtc 18386433  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  18386432 caatacttgctgttttgca 18386414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29661329 - 29661247
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| |||||| ||||| | ||||||| |||||| |||| |||| ||||||||||||| || ||||||    
T  29661329 caaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgttgttctgccttgtgttgtactattctgt 29661247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 34117458 - 34117392
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgt 82  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| || |||||    
T  34117458 caaaaatcgtataaaacgaaaaattattcaatgccataaaaatttgtcttgtgttgttctgtcttgt 34117392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 20127254 - 20127177
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||| ||||||||| |  ||||||||||| |||| ||| || ||||||||| ||  |||||||||||| ||||    
T  20127254 aaaaatttgtcatgtgctgttctatcttgtgttgtgttgttttgtcttgtactgttctatc--gtacttactgttttgca 20127177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 13781 - 13897
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| || || ||||||| |||||||||||||||||     
T  13781 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgcaattatgccttgtattttgttgttctgcattatactgttctgtcca 13880  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  13881 gtacttactgttttgca 13897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 29611158 - 29611256
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| || |||||||||||||||||    
T  29611158 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgttgttatgccttgtgttgtgttgttatgcattatactgttctgtcc 29611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 15001469 - 15001352
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||| || |||| |||| ||||||||||||||||||||||| || |||||||||||||    
T  15001469 caaaaatcatataaaacagaaaattattcaataccataaaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtcc 15001370  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  15001369 agtacttactgttttgca 15001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 35225664 - 35225548
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||| || ||||||||||| ||| |||| || |||| ||||||||     
T  35225664 caaaaatcatataaaacaggaaattattcaataccataaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtcctgtcttgtactattctgtcca 35225565  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  35225564 gtacttactgttttgca 35225548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 8673157 - 8673275
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| | || ||||||| ||||    
T  8673157 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttttgtc 8673256  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  8673257 cagtacttgctgttttgca 8673275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 37618504 - 37618611
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||| ||| || ||||||| ||||| ||||||||     
T  37618504 tataaaacaaaaaattattcaatgccataaacatttgtcatgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttacc 37618603  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  37618604 gttttgca 37618611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 3251758 - 3251876
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||| ||||||| | ||||| |||||||||    
T  3251758 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtc 3251857  T
Q  114 cggtacttactgttctgca 132  Q
    || ||||||||||| ||||    
T  3251858 cgatacttactgttttgca 3251876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32303687 - 32303805
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||| |||||| ||||||| | || ||||||||||||    
T  32303687 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtactgttctgtc 32303786  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32303787 cagtacttgctgttttgca 32303805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 45446458 - 45446340
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  45446458 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 45446359  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  45446358 cagtacttactgttttgca 45446340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32020103 - 32020221
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  32020103 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 32020202  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32020203 cagtacttgctgttttgca 32020221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 41709780 - 41709662
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||| | || || |||||||||    
T  41709780 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgctgttctgccttgtgttgtactgttctatcttgtattgttctgtc 41709681  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  41709680 cagtacttactgttttgca 41709662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 13407038 - 13407150
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| | |||||| ||||||| |||| |||| ||||||||||||| ||||||| |||| |||||||||||||    
T  13407038 caaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatattgtactgttctgtcc 13407137  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  13407138 agtacttactgtt 13407150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 27103962 - 27103855
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||||||||| |||||||||||||  |||||| | || ||||||||||||    
T  27103962 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtaatgttctatcttgtactgttctgtc 27103863  T
Q  114 cggtactt 121  Q
    | ||||||    
T  27103862 cagtactt 27103855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 31732067 - 31731949
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||| |||||| || || |||||||||| ||||||| | ||||||| |||||||    
T  31732067 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctattctgtcttgtgttgtactgttctatcttatacttttctgtc 31731968  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  31731967 cagtacttactgttttgca 31731949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 34101511 - 34101401
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||  ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | |||||||||| ||||    
T  34101511 tcaaaaatcgtataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgatgttctgccttgtgttgtactgttctatcttatactgttttgtc 34101412  T
Q  114 cggtacttact 124  Q
    | |||||||||    
T  34101411 cagtacttact 34101401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 6386579 - 6386472
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||  ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  6386579 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 6386480  T
Q  114 cggtactt 121  Q
    | ||||||    
T  6386479 cagtactt 6386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 40389042 - 40388935
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||| || |||||||||||| |||||||| ||| ||||||| |||| ||||||||||||||||||| ||| || |||| || |||||     
T  40389042 caaaaatcgtataaaataaaaaattattcaatgccataaaattttttcctgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtcca 40388943  T
Q  116 gtacttac 123  Q
    ||||||||    
T  40388942 gtacttac 40388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 31513685 - 31513803
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  31513685 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 31513784  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||||||||| ||||    
T  31513785 caatacttactgttttgca 31513803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 5968966 - 5969066
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||| ||||||| | || ||||||||||||    
T  5968966 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 5969065  T
Q  114 c 114  Q
    |    
T  5969066 c 5969066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 22999259 - 22999167
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||| |||||||||| | |||||| |||||||||||| | || |||||||    
T  22999259 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgttctgtgctgttctcccttgtattgtgctgttctttcttgtactgtt 22999167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 45114057 - 45113941
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  ||||||||||||  |||| |||||| || |||| |||| ||||||||||||||||| ||| | || ||||||| |||||     
T  45114057 caaaaatcgtataaaacataaaattattcaatgtcatacaaatttatcatgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtcca 45113958  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  45113957 gtacttactgttttgca 45113941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 6460245 - 6460154
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| |||  | ||||||| ||||  ||||||||||||    
T  6460245 aaattattcaataccataaaaatttgtcctgtgctactctgccctgtgctgtgctgttttgtcctgtactgttttgtcaagtacttactgtt 6460154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 7591550 - 7591629
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| | |||||| |||| |||||||    
T  7591550 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtactgttct 7591629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 34063131 - 34063024
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| |||| |||  |||||| |||||| ||||||| | || ||||||||||||    
T  34063131 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgtgctgccttatgttgtactgttctatcttgtactgttctgtc 34063032  T
Q  114 cggtactt 121  Q
    | ||||||    
T  34063031 cagtactt 34063024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 37664385 - 37664468
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||| ||||||||| |||||||||    
T  37664385 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgcattgtgttgtactgttctgt 37664468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 29672425 - 29672538
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||| |||||||||||||||| |||| || |||||||||  ||||||| | || || |||||||||    
T  29672425 tcaaaaatcgtataaaacaaaaaattactcaatgccatgaaaaatttgtcctgtgttgttctgtcttgtgttgcactgttctatcttgtattgttctgtc 29672524  T
Q  114 cggtacttactgtt 127  Q
    | || |||||||||    
T  29672525 cagttcttactgtt 29672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30501147 - 30501066
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| || ||||||| ||| ||||||| ||||||||    
T  30501147 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatggtgttttgtcttatgttgtgttgttctgt 30501066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 4052483 - 4052402
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | ||||||||||  ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  4052483 tcaaaaatcgtataaaacaa--aattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 4052402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 10467066 - 10466987
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||| ||  |||||||||||||||||||||||| | |||||| ||||| ||||||    
T  10467066 caaaaatcgtataaaacaaaaaattattctatgtcataaaaatttgtcctgtgctgttctcccttgtattgtgttgttct 10466987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 16595272 - 16595363
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||||||| |||| |||| | | | || || ||||||||||| || |||||||| |||||||||||||||| |||| |||||||    
T  16595272 aaattattcaataccaaaaaagtttgccatttacttttctgccttgtgttttgttgttctgtcttatactgttctgtccagtacatactgtt 16595363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 37474721 - 37474642
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | ||||||| || ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||||||||||    
T  37474721 caaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgttatcccttgtattgtgctgttct 37474642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 41548620 - 41548541
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| ||||| ||||||    
T  41548620 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgttgttct 41548541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 29563328 - 29563426
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | ||||||||||| ||||||| | || |||||||||||    
T  29563328 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgt 29563426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 30543125 - 30543207
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||  |||||| ||||| |||||||| |||||||||||| |||| ||||||||||||| |||||||||    
T  30543125 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctgtgttgttctgccttgtgttgtactgttctgt 30543207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 16485912 - 16485976
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgcctt 80  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||  ||||||||| ||||||    
T  16485912 caaaaatcatataatacagaaaattattcaataccataaaaatttgttttgtgctgttctgcctt 16485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 17805654 - 17805575
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||| |||| | |||||||||||| | |||||| || ||||||| ||||  |||||||||||| ||||    
T  17805654 aaaaatttgtcctgtgttgttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgca 17805575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 37861863 - 37861801
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| |||||||||    
T  37861863 aaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 37861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 25478236 - 25478138
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||| ||||| ||||||||| ||    ||| ||||| |||||||||||||  |||||| | |||||||||| ||||  |||||||||    
T  25478236 tataaaacaaaaaattactcaatgccataaaaaatt----tgtcctgttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttact 25478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 4599644 - 4599572
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||||||| |||||||||| || | || |||| || ||||||||||| |||||||| ||||| ||||    
T  4599644 aaattattcaatacaataaaaatttatcatatgttgttctgtcttgtgttgtgttgttctgtcttatattgtt 4599572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 12753428 - 12753527
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||| ||| |||| |||| || ||||||||||  |||||| | || |||||||||||||    
T  12753428 caaaaatcgtataaaacaacaaattactcaatgccataaaatttttgtcatgtgttgttctgtcttgtgttgtattgttctatcttgtactgttctgtcc 12753527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 10656798 - 10656868
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| || ||||||||||||| |||||||||||||| |  | |||| || ||||||||||| ||||||    
T  10656798 tataaaagaaaaaattattcaataacataaaaatttgtcatacgttgttatgtcttgtgttgtgttgttct 10656868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 21272676 - 21272598
Alignment:
Q  54 aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| ||||||| ||||||||||||| ||| ||| | || || ||||||||||  ||||| ||||| ||||    
T  21272676 aaaatttgtcctatgctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgca 21272598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 9624219 - 9624182
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  9624219 aaattattcaataccataaaaatttgtcatgtgttgtt 9624182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 14005156 - 14005229
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| |||||  ||||||| ||||||||| || |||| || |||||||||| |||||||||    
T  14005156 tataaaacaaaaaattactcaatgtcataaaaaatttgtcctatgttgttctgtcttgtgttgtactgttctgt 14005229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 17520568 - 17520507
Alignment:
Q  51 ataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| || | |||||||||    
T  17520568 ataaaaatttgtcctgtactgttctgtcttgtgttgtgttattctgtcttcttctgttctgt 17520507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39642876 - 39642828
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||| ||||||||||||  |||||||||||||| |||| ||||    
T  39642876 tataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgatgtt 39642828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3649641 - 3649533
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||  |||||     
T  3649641 caaaaaacatataaaacaagaaattattcaataccataaaaatttgtgatgtgctgttatgccttgtgttgtgctgttctgcattatactgtgttgtcca 3649542  T
Q  116 gtacttact 124  Q
    |||||||||    
T  3649541 gtacttact 3649533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 22318465 - 22318581
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| |||| |||| || ||||||||||||||||||| ||| |||| ||||||||     
T  22318465 caaaaatcatataaaacaagaaattattcaatatcataaaaatttgtcatgtgttgttatgtcttgtgttgtgctgttctgcattgtactcttctgtcca 22318564  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  22318565 gtacttactgttttgca 22318581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26083343 - 26083235
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||| |||||| ||||| ||||     
T  26083343 caaaaagcatataaaacatgaaattattcaataccataaaaatttgtcgtgtactgttatgccttgtgttgtgttgttctgcattatattgttcagtcca 26083244  T
Q  116 gtacttact 124  Q
     ||||||||    
T  26083243 atacttact 26083235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9807161 - 9807053
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | || |||||||||||||     
T  9807161 caaaaatcgtataaaacataaaattattcaatgccatacaaatttgtcctgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtcca 9807062  T
Q  116 gtacttact 124  Q
    |||||||||    
T  9807061 gtacttact 9807053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 49152177 - 49152297
Alignment:
Q  13 catcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctg 111  Q
    ||||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  49152177 catcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctg 49152276  T
Q  112 tccggtacttactgttctgca 132  Q
    ||| |||||| ||||| ||||    
T  49152277 tccagtacttgctgttttgca 49152297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 21580032 - 21579914
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||| | |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||| | |||||||||||||||    
T  21580032 tcaaaaatcgtataaaactaaaaattactcaataccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttatactgttctgtc 21579933  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  21579932 cagtacttactgttttgca 21579914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 29785617 - 29785735
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | ||||||||||||||     
T  29785617 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtt 29785716  T
Q  114 cggtacttactgttctgca 132  Q
    | ||||||| |||| ||||    
T  29785717 cagtacttattgttttgca 29785735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 55065413 - 55065530
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||| || || | | |||||||||| |||||    
T  55065413 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtcc 55065512  T
Q  115 ggtacttactgttctgca 132  Q
     |||||| ||||| ||||    
T  55065513 agtacttgctgttttgca 55065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 56154627 - 56154520
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||| ||||| ||||||||||||| ||||||| | |||||||||||||||    
T  56154627 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttatactgttctgtc 56154528  T
Q  114 cggtactt 121  Q
    | ||||||    
T  56154527 cagtactt 56154520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 20802611 - 20802729
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| |||||||||||| |||| ||||||||||||| ||||||| | || |||||||||||     
T  20802611 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtt 20802710  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  20802711 cagtacttgctgttttgca 20802729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 24002344 - 24002226
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||| ||||| |||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  24002344 tcaaaaatcgtataaaacaaaaaattactcaatgccaaaaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 24002245  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  24002244 cagtacttgctgttttgca 24002226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 43641105 - 43640987
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  43641105 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 43641006  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  43641005 tagtacttgctgttttgca 43640987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 14296602 - 14296485
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||| ||||||||| ||||||| |||| | |||||||||||    
T  14296602 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtcc 14296503  T
Q  115 ggtacttactgttctgca 132  Q
     ||||||| |||| ||||    
T  14296502 agtacttattgttttgca 14296485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 2786969 - 2786853
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||  ||||||||||||||| ||||||| ||||| || || ||||||| |||||     
T  2786969 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtctagtgctgttttgccttatgttgtgttgttcggtcttgtactgttatgtcca 2786870  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  2786869 gtacttactgttttgca 2786853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 14314850 - 14314738
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||| ||||||||| ||||||| |||| | |||||||||||    
T  14314850 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtcc 14314751  T
Q  115 ggtacttactgtt 127  Q
     ||||||| ||||    
T  14314750 agtacttattgtt 14314738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 50729627 - 50729715
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| | |||| ||| |||||    
T  50729627 aaattatttaatatcataaaaatttgttctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgccgtccagtatttact 50729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 53200724 - 53200815
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactg 106  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||| |||||||| || |||||    
T  53200724 tcaaaaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgttatgccttatgttgtgatgttctgttttgtactg 53200815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 6776574 - 6776484
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  6776574 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 6776484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 23521886 - 23521768
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||| | | || ||||||||||||    
T  23521886 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttttatcttgtactgttctgtc 23521787  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  23521786 cagtacttgctgttttgca 23521768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 39078666 - 39078596
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttg 86  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  39078666 caaaaatcatataaaataagaaattattcaataccataaaaatttatcctgtgttgttatgccttgtgttg 39078596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 37695622 - 37695727
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| | |||||| ||||| |||||| | || ||||||||||| |     
T  37695622 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtaca 37695721  T
Q  116 gtactt 121  Q
    ||||||    
T  37695722 gtactt 37695727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 44324423 - 44324500
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  44324423 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttatgttgtgctgtt 44324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 37865749 - 37865641
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| |||||||||  ||||| |||| |||| ||||||||||||| ||||||| | || ||||||| ||||| ||||||||    
T  37865749 tataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttac 37865650  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  37865649 tgttttgca 37865641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 50178574 - 50178690
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| ||||| |||||| | || ||||||||||| |     
T  50178574 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgatgttctttcttgtactgttctgtact 50178673  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  50178674 gtacttgctgttttgca 50178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 52949725 - 52949610
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||||| || | |||||| |||||||||||| | || ||||||||||| |     
T  52949725 caaaaatcgtataaaacaa-aaattattcaatgtcataaaaatttgtcctgtgctattctcccttgtattgtgctgttctttcttgtactgttctgtact 52949627  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  52949626 gtacttgctgttttgca 52949610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 33552922 - 33553005
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  33552922 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttttgccttgtgttgtactgttctgt 33553005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 21202745 - 21202636
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| |||||| ||||||||| ||  ||||||||||||||||||| || ||||||| |||||    
T  21202745 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgttttgtgttgtgctgttctgtcttgtactgttttgtcc 21202646  T
Q  115 ggtacttact 124  Q
     |||||||||    
T  21202645 agtacttact 21202636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 7555038 - 7555130
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| |||| |||| || ||||||||||| |||| ||| || |||||||    
T  7555038 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgtt 7555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 29592900 - 29592824
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgt 92  Q
    |||||| |||||||||||| |||||||||||| ||| ||||||||||| ||| ||||| ||||||||||||| ||||    
T  29592900 caaaaatcatataaaacaaaaaattattcaatgccaaaaaaatttgtcttgttctgttctgccttgtgttgttctgt 29592824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 47642572 - 47642668
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||| |||||||||||| | |||||| ||||| |||||| | || |||||||||||    
T  47642572 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttatcctgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgt 47642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50186533 - 50186417
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||| || ||||||||||||  |||||||||||||||| || |||| || ||| ||||||||| || ||| ||||||||||| |||      
T  50186533 caaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcctatgttgttatgtcttatgttgtgctattttgtcttatactgttcagtcaa 50186434  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  50186433 gtacttactgttttgca 50186417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 7001839 - 7001748
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||| |||||||||||||||||||  |||| || ||||||||||| |||||||| || |||| || ||||| ||| ||||||||    
T  7001839 aaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtgttgtgatgttctgtcttgtactattttgtccagtatttactgtt 7001748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 30942793 - 30942682
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||| | |||| || | |||||| ||||  ||||||  ||| ||||||| |||||     
T  30942793 caaaaatcatataaaacaagaaattattcaatgctataaaaatttgtcatatgctattataccttgtattgtaatgttcttaattgtactgttttgtcca 30942694  T
Q  116 gtacttactgtt 127  Q
     |||||||||||    
T  30942693 atacttactgtt 30942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 37931916 - 37931809
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||| | |||||||||||| ||||||||| ||||| ||||||||| |||||||| || || | || ||| || ||||||| ||||| |||||||||    
T  37931916 tataaaacgaaaaattattcaatgccataaaaagttgtcttgtgctgttctgccttgtattatgttattatgtcttgtactgttatgtccagtacttact 37931817  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  37931816 gttttgca 37931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 33177113 - 33177230
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| ||||||||| || |||| || |||||||||| ||||||| | |||||||||||||||     
T  33177113 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctttgttgttctgtcttgtgttgtactgttctatcttatactgttctgtca 33177212  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||| ||| ||||    
T  33177213 agtacttaccgttttgca 33177230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 47361499 - 47361572
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||| |||||||||    
T  47361499 tataaaacaaaaaattactcaatatcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 47361572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 52319311 - 52319214
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||| ||||| |||||| ||||| ||||    
T  52319311 aaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgca 52319214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 20518112 - 20518196
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| || |||| | || |||||||    
T  20518112 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctatcttgtactgtt 20518196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12600880 - 12600774
Alignment:
Q  27 taaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactg 125  Q
    |||||||| ||| || ||||| ||||||||| ||||||  |||||||| || |||||||||| ||||||| | || ||||||||||||| |||||| |||    
T  12600880 taaaacaaaaaactactcaatgccataaaaaatttgtcaagtgctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctg 12600781  T
Q  126 ttctgca 132  Q
    || ||||    
T  12600780 ttttgca 12600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 24210324 - 24210251
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||| | |||||||||| |||||| |||||||||||||| ||||||| |||| |||| |||||||||||||    
T  24210324 tcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgtgttgttctgccttgtgttgt 24210251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 52673813 - 52673756
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||    
T  52673813 aaattattcaataccataaaagtttgtcatgtgcagttctgccttgtgttgtgttgtt 52673756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 53343567 - 53343640
Alignment:
Q  25 tataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||||||||| |||| ||||||||||| |||| |||| ||| ||||||||| |||||||||    
T  53343567 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttctgcattgtgttgtactgttctgt 53343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 11056048 - 11055977
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttg 86  Q
    ||||||| | |||||||||| |||||||||||| ||||||| |||||||| || ||||| | ||||||||||    
T  11056048 tcaaaaatcgtataaaacaaaaaattattcaatgccataaagatttgtcccgtactgttctaccttgtgttg 11055977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 9512420 - 9512538
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||| ||||||||||| |||||| || || ||| |||||  || |||| | || ||||||||||||    
T  9512420 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctattctgtcttttgttgcactattctatcttgtactgttctgtc 9512519  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  9512520 acgtacttgctgttttgca 9512538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 2725212 - 2725281
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtg 83  Q
    ||||||| | |||||||||| |||||| |||||  ||||||| ||||||||||||||||| |||||||||    
T  2725212 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtg 2725281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 29616166 - 29616093
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| || |||||||||| |||||||||    
T  29616166 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgtcttgtgttgtactgttctgt 29616093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 54542996 - 54542915
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| ||||||||| ||| ||||||||| |||||||    
T  54542996 tcaaaaatcgtataaaacaaaaaattactcaatgacataaaaaatttgtcttgtgctgttctgctttgtgttgtactgttct 54542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 7381265 - 7381189
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||||||||||||||| |||||||||||||| |||| || ||||| || || |||| ||| || || ||||||||    
T  7381265 aaattattcaataccatacaaatttgtcctgtgatgttctgtcttgtattatgttgttatgtcttgtaatgttctgt 7381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 38486347 - 38486450
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||||||     |||||||| | ||  |||||||||||  ||||||||    
T  38486347 tataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgctgttctgccttgt-----gctgttctatcttgcactgttctgtctagtacttac 38486441  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  38486442 tgttttgca 38486450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 47669208 - 47669296
Alignment:
Q  39 ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||| ||||||| |||||| || ||||||||||||| ||||||  |||||  | || || ||||||||||  |||||||||||    
T  47669208 ttattcaatagcataaaagtttgtcgtgcgctgttttgccttatgttgtattgttccatcttgtattgttctgtccaatacttactgtt 47669296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 985287 - 985217
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||||| ||||||| || | ||||||||||| |||||||||||||||| | || ||||||| ||||||||||    
T  985287 caaaaatcatataagaccaaaaattattcaa-accataaaaatttgtcttatgatgttttgtcttgtgttgt 985217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 10587047 - 10586989
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttg 76  Q
    ||||| |||||||||||| ||||||||| ||||||||||| ||| ||||||||| |||||    
T  10587047 aaaaatcatataaaacaaaaaattattc-ataccataaaagtttatcctgtgctattttg 10586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 36743778 - 36743841
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| |||||| ||||||    
T  36743778 tataaaacaacaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgt 36743841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 50727993 - 50728052
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||||| | |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  50727993 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgtt 50728052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 50736007 - 50736066
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||||| | |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  50736007 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgtt 50736066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 55593891 - 55593792
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||  ||   |||| ||||||||||||| ||||||| | || ||||||||||||    
T  55593891 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgcattgttctgccttgtgttgtactgttctatcttgtactgttctgtc 55593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 10184877 - 10184927
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    ||||||| |||| ||||| ||||||||||||||| |||||| |||||||||    
T  10184877 catataagacaaaaaattgttcaataccataaaagtttgtcatgtgctgtt 10184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 44649245 - 44649348
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||||||  |||||||||||  ||| |||||||||| |||| |||| | |||||| |||| ||||||| | || ||||||||||| |     
T  44649245 caaaaatcgtataaaacaa--aattattcaatgtcatcaaaatttgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtact 44649342  T
Q  116 gtactt 121  Q
    ||||||    
T  44649343 gtactt 44649348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 41711843 - 41711806
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgt 62  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41711843 tataaaacaaaaaattattcaatagcataaaaatttgt 41711806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 46680592 - 46680649
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||| |||||||||||| |||||| ||||| |||| ||||||||||||||| |||||    
T  46680592 aaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgtt 46680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 20694368 - 20694304
Alignment:
Q  24 atataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||||||| |||||| ||| | ||||| |||||||||| |||||| || |||||||||||||    
T  20694368 atataaaacaaaaaattactcattgccatacaaaatttgtcatgtgctattctgccttgtgttgt 20694304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32181259 - 32181211
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||  ||||||||||||  |||| |||||||||||||||||||    
T  32181259 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgtt 32181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32858319 - 32858283
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttg 61  Q
    |||||||||| |||||||||||||| |||||||||||    
T  32858319 tataaaacaaaaaattattcaatactataaaaatttg 32858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 34929920 - 34929848
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgt 87  Q
    |||||| | |||||||||| || ||| | ||| |||||||||||| ||| ||||||||| |||||||||||||    
T  34929920 caaaaatcgtataaaacaaaaatttactgaatgccataaaaattttgtcatgtgctgttctgccttgtgttgt 34929848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 42772763 - 42772703
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttg 76  Q
    |||||| |||||||||||| |||||| ||||| ||||||| | || |||| ||||||||||    
T  42772763 caaaaatcatataaaacaaaaaattactcaatgccataaataattatcctctgctgttttg 42772703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 43189852 - 43189924
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||| ||||||||||||||||||||| ||| || |||| || | | |||||| ||||| ||||||||    
T  43189852 tataagacaaaaaattattcaataccataaaagtttatcatgtgttgctcttccttgtattgtgttgttctgt 43189924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 6896170 - 6896074
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||| |||||||||||||||    
T  6896170 caaaaggcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttctgcattatactgttctgt 6896074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30712859 - 30712751
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||  ||||||||| ||||||| ||| |||||||||||||     
T  30712859 caaaaatcatataaaacaaaaaattattcaataccataaaaatttgtcctttgctgttatgcgctgtgttgtgttgttctgcattgtactgttctgtcca 30712760  T
Q  116 gtacttact 124  Q
    |||||||||    
T  30712759 gtacttact 30712751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 9733017 - 9733135
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||| ||||||| | |||||||||||||||    
T  9733017 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttatactgttctgtc 9733116  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  9733117 cagtacttgctgttttgca 9733135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 13829441 - 13829324
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||||  || ||||||| |||||    
T  13829441 tcaaaaatcatataaaacaaaaaattattcaatatcataaaaatttgttctgtgatgttctgccttgtgttgtgctgttctgctttgtactgttttgtcc 13829342  T
Q  115 ggtacttactgttctgca 132  Q
      || |||||||| ||||    
T  13829341 aataattactgttttgca 13829324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 40692308 - 40692190
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| | || ||||||| ||||    
T  40692308 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttatgtc 40692209  T
Q  114 cggtacttactgttctgca 132  Q
      ||| |||||||| ||||    
T  40692208 tagtatttactgttttgca 40692190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 34338813 - 34338706
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  34338813 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 34338714  T
Q  114 cggtactt 121  Q
    | ||||||    
T  34338713 cagtactt 34338706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 5278921 - 5279039
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||||||||||  |||||| | || ||||||||||||    
T  5278921 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtc 5279020  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  5279021 aagtacttactgttttgca 5279039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18685839 - 18685721
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || |||||||||| ||||||| | || ||||||||||||    
T  18685839 tcaaaaatcctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctgtc 18685740  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18685739 cagtacttgctgttttgca 18685721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 32497918 - 32497800
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||| |||||| ||||||| | || || |||||||||    
T  32497918 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtattgttctgtc 32497819  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  32497818 cagtacttactgttttgca 32497800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 33366613 - 33366495
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||| || |||||||||| ||||||| | || || |||||||||    
T  33366613 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtc 33366514  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  33366513 cagtacttgctgttttgca 33366495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3913548 - 3913664
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| | |||||||||| |||||||||||| |||| || |||| |||||||||||||| |||||||| |||||||||||| ||      
T  3913548 caaaaatcgtataaaacaaaatattattcaatgccataaaaatttatcctatgttgttctgccttgtgttgtgttgttctgtcttatactgttctatcaa 3913647  T
Q  116 gtacttactgttctgca 132  Q
    ||| |||||||| ||||    
T  3913648 gtatttactgttttgca 3913664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 30326418 - 30326525
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| | ||||| | || ||||||||||||    
T  30326418 tcaaaaatcgtataaaacaaaaaattactcaattccataaaaattttgtcctgtgctgttctgccttgtgttgtacggttctatcttgtactgttctgtc 30326517  T
Q  114 cggtactt 121  Q
    | ||||||    
T  30326518 cagtactt 30326525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17540717 - 17540599
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatt-tgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| | |||| ||||||||| ||||||||||||| ||||||| | |||||||||||| ||    
T  17540717 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatatgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctatc 17540618  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17540617 cagtacttgctgttttgca 17540599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 35114788 - 35114670
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||| | ||||||||| |||||||||||| ||| ||||||||||||| ||||||| | || ||||||||||||    
T  35114788 tcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttgtactgttctgtc 35114689  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35114688 cagtacttgctgttttgca 35114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 33889246 - 33889163
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| ||||||||||| |||||||||  ||||||||| ||||||||||||| |||||||||    
T  33889246 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgttatgtgctgttctgccttgtgttgtactgttctgt 33889163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 37003955 - 37004074
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcct-gtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | ||||||| || |||||||||||| ||||||||| |||||||| |||||||||| |||||| |||| ||||||| | ||||||||||||||    
T  37003955 tcaaaaatcgtataaaataaaaaattattcaatgccataaaaaatttgtccttgtgctgttttaccttgtattgtactgttctatcttatactgttctgt 37004054  T
Q  113 ccggtacttactgttctgca 132  Q
    |  |||||| ||||| ||||    
T  37004055 ctagtacttgctgttttgca 37004074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2086075 - 2085957
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  2086075 tcaaaaatcgtataaaacaaaaaattactcaatggcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 2085976  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  2085975 cagtacttgctgttttgca 2085957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 4641519 - 4641401
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||   ||||||| ||||||||||| |||| |||||| |||||| ||||||| |||| ||||||||||||    
T  4641519 tcaaaaatcgtataaaacaaaaaattactcaatggtataaaaaatttgtcctgtgttgttctgccttatgttgtactgttctatattttactgttctgtc 4641420  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  4641419 cagtacttgctgttttgca 4641401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 19513776 - 19513894
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| |||||||||| |||||||||||| |||||||| || ||| | |||| ||||||| | || ||||||| | ||    
T  19513776 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcccgtgctgttctgtcttctattgtactgttctatcttgtactgttttatc 19513875  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  19513876 cagtacttactgttttgca 19513894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 39461317 - 39461199
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || || |||| ||||    
T  39461317 tcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtc 39461218  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  39461217 cagtacttactgttttgca 39461199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 26981816 - 26981885
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||| || ||||||||||||| |||||||    
T  26981816 aaaaatttatcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtccagtactta 26981885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 2645173 - 2645269
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttct 110  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||| |||||||| |||||| |||||| ||||||| | ||||||||||||    
T  2645173 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttctgccttatgttgtactgttctatcttatactgttct 2645269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 16104277 - 16104170
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||| |||||| |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  16104277 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 16104178  T
Q  114 cggtactt 121  Q
    | ||||||    
T  16104177 cagtactt 16104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 28824654 - 28824761
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| || |||||| ||  |||||||||||||| |||  |||| || ||| |||||||||||||||| || |||||||| |||| |||||||||    
T  28824654 tataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgttctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttact 28824753  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  28824754 gttttgca 28824761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 1247157 - 1247060
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    |||||| | ||||||| || |||||||||||| ||||||||||||||| ||| ||||  ||| |||||||||| |||||||| || ||||||| ||||    
T  1247157 caaaaatcgtataaaataaaaaattattcaatgccataaaaatttgtcttgtactgtactgctttgtgttgtgttgttctgtcttgtactgttatgtc 1247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 7258889 - 7258792
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| ||| || || ||||||||||||| ||||||| | || ||||||||||||| ||||||    
T  7258889 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactattctgccttgtgttgtactgttctatcttgtactgttctgtccagtactt 7258792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 30798576 - 30798692
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| | ||||||||| |||||||||| ||||||||| || ||| ||||   ||||||| | |||||||||||||||    
T  30798576 tcaaaaatcgtataaaacaaaaaattactaaataccatacaaaatttgtcatgtgctgttctgtcttatgtta--ctgttctatcttatactgttctgtc 30798673  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  30798674 cagtacttgctgttttgca 30798692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 32766593 - 32766672
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| | |||||  ||||| ||||||    
T  32766593 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgttctcccttgcattgtgttgttct 32766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18793358 - 18793456
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | |||| |||||| ||||||| | |||||||||| ||||| |||||||    
T  18793358 tataaaacaaaaaattactcaatcccataaaaaatttgtcttgtgatgttctaccttatgttgtactgttctattttatactgttttgtccagtactta 18793456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 37308638 - 37308552
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||| ||||||    
T  37308638 aaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtactt 37308552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 38993179 - 38993264
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||||||||||||   |||||| |||| |||| |||||| ||||||||||| || | ||||| |||||||||| |||||||||    
T  38993179 aaattattcaataccataa---tttgtcttgtgttgttctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttact 38993264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 16177971 - 16178085
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||||||  ||||||||||| | ||||||||||||| |||| |||| |  ||||||||||| || | ||| ||  ||||||||||||     
T  16177971 caaaaatcgtataaaacaa--aattattcaatgctataaaaatttgtcgtgtgttgttctatcttgtgttgtgttgatatgtcttgcactgttctgtcca 16178068  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  16178069 gtacttactgttttgca 16178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 27462900 - 27462969
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| ||||||||||||  |||| ||||||||| |||| |||| | |||||||||||||||||||||    
T  27462900 aaaacaaaaaattattcaatgtcatataaatttgtcatgtgttgttctaccttgtgttgtgctgttctgt 27462969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 26418916 - 26418808
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||| | |||||||| ||| ||| |||| |||| ||||||| ||||||||||||||| ||  |||||||||||   |||||||    
T  26418916 tataaaacaaaaaattactcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttac 26418817  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  26418816 tgttttgca 26418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 42365578 - 42365462
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||| |||||||||||| |||||| ||||| |||| |||||||| || |||| |||| ||||||||||||| ||||||| | ||||  |||| | |||     
T  42365578 aaaaatcatataaaacaaaaaattactcaatgccataaaaaatttatcttgtgttgttctgccttgtgttgtactgttctatcttatgttgttttttcca 42365479  T
Q  116 gtacttactgttctgca 132  Q
     ||||||||||| ||||    
T  42365478 atacttactgttttgca 42365462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 42706362 - 42706243
Alignment:
Q  15 tcaaaaagcatataaaacaagaaa-ttattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | |||||||||| ||| ||| ||||| ||||||||| |||||||||||||||| || ||||||||||  |||||| | || ||||||| |||    
T  42706362 tcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtattgttctatcttgtactgttatgt 42706263  T
Q  113 ccggtacttactgttctgca 132  Q
    |  || ||||||||| ||||    
T  42706262 caagtgcttactgttttgca 42706243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 44284632 - 44284561
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgtt 85  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| |||||||||||    
T  44284632 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgtt 44284561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 16062188 - 16062261
Alignment:
Q  40 tattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||||||||||||||||||| ||||| |||| || ||| ||||||| |||| ||| || ||||||| ||||    
T  16062188 tattcaataccataaaaatttgttctgtgttgttctgtcttatgttgtgttgttatgtcttgtactgttttgtc 16062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 40832584 - 40832656
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||||  ||||||||||||| |||| |||| | ||||||||||||||||||| | || |||| |||||||    
T  40832584 attcaataatataaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctatcttgtactattctgtc 40832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 10399967 - 10400013
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctg 71  Q
    |||||||||| |||||||||||| |||||||||||| || |||||||    
T  10399967 tataaaacaaaaaattattcaatgccataaaaatttatcatgtgctg 10400013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 11114865 - 11114793
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||| | |||||||||||| |||||||||||| || | |  |||| || ||||||||||| ||||||||    
T  11114865 tataaaacgaaaaattattcaatgccataaaaatttttcttatattgttctgtcttgtgttgtgttgttctgt 11114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 12939388 - 12939471
Alignment:
Q  16 caaaaagcatataaaacaagaaat--tattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| |||||||||||| |||   ||||||||   || ||||||| || |||| |||| |||||||||||||||||||||||    
T  12939388 caaaaatcatataaaacaaaaaacaatattcaatgttattaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgt 12939471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 38623395 - 38623431
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatt 59  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  38623395 catataaaacaaaaaattattcaatatcataaaaatt 38623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 41934583 - 41934467
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  |||| |||||||||| |||||||||||  || | | ||||  ||||||||||| |||||| | || ||||||  | | ||    
T  41934583 caaaaatcatataagacataaaatcattcaataccgtaaaaatttgttatgcgttattttatcttgtgttgtgttgttctatcttgtactgtgttatacg 41934484  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  41934483 gtacttactgttttgca 41934467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 5534 - 5650
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||| |||||     
T  5534 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtcca 5633  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  5634 gtacttgctgttttgca 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 51925290 - 51925406
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||| || ||||||| | |||     
T  51925290 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttgtgttgtgctgttatgtcttgtactgttatatcca 51925389  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  51925390 gtacttaccgttttgca 51925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 51259863 - 51259979
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||| ||||||| | || ||||||||| |||     
T  51259863 aaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctatcca 51259962  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  51259963 gtacttactgttttgca 51259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 28675794 - 28675676
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  28675794 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 28675695  T
Q  114 cggtacttactgttctgca 132  Q
    | ||||||| |||| ||||    
T  28675694 cagtacttattgttttgca 28675676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 22484845 - 22484941
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||||||||||||||| ||||||||| | |||| ||||||| ||| || | |||||||||| ||||| |||||||||||| ||||    
T  22484845 aaattattcaataccataaaaatttgtcttgtgctgttctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgca 22484941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34026671 - 34026588
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  34026671 tcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 34026588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 50386547 - 50386654
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| | |||||| ||    
T  50386547 tataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgct 50386646  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  50386647 gttttgca 50386654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 4851537 - 4851655
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||||||  |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  4851537 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtcttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 4851636  T
Q  114 cggtacttactgttctgca 132  Q
    |||||||| ||||| ||||    
T  4851637 cggtacttgctgttttgca 4851655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26282468 - 26282586
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||| ||||||||| || |||||||||| ||||||| | || ||||||||| ||    
T  26282468 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctatc 26282567  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  26282568 cagtacttgctgttttgca 26282586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3864756 - 3864873
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||| || ||||||  |||||| | || ||||||||||| |    
T  3864756 caaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttatgcgttatgttgtaatgttctatcttgtactgttctgtgc 3864855  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  3864856 agtacttactgttttgca 3864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 31883104 - 31883209
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| |||||||||||| | || ||||||||||| |     
T  31883104 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttgtattgtgctgttctttcttgtactgttctgtact 31883203  T
Q  116 gtactt 121  Q
    ||||||    
T  31883204 gtactt 31883209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3867731 - 3867842
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||     | |||||| ||| ||||||| ||| |     
T  3867731 caaaaatcatataaaacaagaaattattcaataccataaaaacttgtcatgtgttgttatgccttgtg-----ccgttctgcattgtactgttatgttca 3867825  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  3867826 gtacttactgttttgca 3867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 25860503 - 25860620
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | |||||||| |||||||||||| |||| |||||| |||||||||||||| | || |||||||||||||    
T  25860503 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttgttatgccttttgttgtgctgttctatcttgtactgttctgtcc 25860602  T
Q  115 ggtacttactgttctgca 132  Q
     || ||||| ||| ||||    
T  25860603 agtgcttaccgttttgca 25860620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 12349252 - 12349352
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||| ||||    
T  12349252 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttatgtc 12349351  T
Q  114 c 114  Q
    |    
T  12349352 c 12349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 5442295 - 5442188
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| |||| |||| | |||||| |||| |||||||  ||| ||||||||||||    
T  5442295 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttataccttgtattgtactgttctaaattgtactgttctgtc 5442196  T
Q  114 cggtactt 121  Q
    | ||||||    
T  5442195 cagtactt 5442188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 25927408 - 25927515
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||| | ||||| |||||||| ||||||| ||||||||| | |||||| |||| ||||||| | |||||||||| ||||    
T  25927408 tcaaaaatcgtataaaacaaaaaatcactcaatgccataaaaaatttgtcttgtgctgttctaccttgtattgtactgttctatcttatactgttttgtc 25927507  T
Q  114 cggtactt 121  Q
    ||||||||    
T  25927508 cggtactt 25927515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 21221451 - 21221553
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| |||||| |||||| ||||||| | || ||||||||||||  |||||| |    
T  21221451 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgc 21221550  T
Q  124 tgt 126  Q
    |||    
T  21221551 tgt 21221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 53557876 - 53557994
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||| |   || || |||||||||    
T  53557876 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttataccttgtattgttctgtc 53557975  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  53557976 aagtacttactgttttgca 53557994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 3964292 - 3964175
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||  ||||||||||||| |||| |||||||||| ||||||||| |||||||| ||||| |||  ||| || | ||||||| ||     
T  3964292 caaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgctgttctgccttgtattgtgttgtgttgtcttgtgctgttctatca 3964193  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  3964192 agtacttactgttttgca 3964175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 44116943 - 44116862
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || |||||||||| |||||||    
T  44116943 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttct 44116862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 10747220 - 10747128
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||| |||||| | || |||||||    
T  10747220 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgtt 10747128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 20609729 - 20609812
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||| ||||| |||||| |||||  ||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  20609729 tcaaaaatcgtatataacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 20609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 53046722 - 53046829
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||| ||||| |||| ||||||||||||| ||||||| | || || ||||||||     
T  53046722 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtattgttctgtt 53046821  T
Q  114 cggtactt 121  Q
    | ||||||    
T  53046822 cagtactt 53046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2135074 - 2134956
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||  ||||||||    
T  2135074 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtaacgttctgtc 2134975  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  2134974 tagtacttgctgttttgca 2134956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 29584879 - 29584761
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| | ||||||| ||||| |||| ||||| |||||| |||||| ||||||| | || ||||||||||||    
T  29584879 tcaaaaatcgtataaaataaaaaattactcaatgcaataaaaaatttgttctgtactgttctgccttatgttgtactgttctatcttgtactgttctgtc 29584780  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  29584779 cagtacttgctgttttgca 29584761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 43175573 - 43175455
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||||||||| ||||||| || ||||||||| || ||||| || | ||||||| | || ||||||| ||||    
T  43175573 tcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttatcgtgtgctgttctgtcttgtattatactgttctatcttgtactgttttgtc 43175474  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  43175473 cagtacttgctgttttgca 43175455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 33364860 - 33364976
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||| | |||| |  ||||| ||||||| |||| | || ||||||| ||| |     
T  33364860 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgggttgttctctcttgtattgtgctattctttcttgtactgttttgtact 33364959  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  33364960 gtacttgctgttttgca 33364976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 21373914 - 21373826
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| ||||||||||||||||||||         |||||||||||||||||||| || || ||||||||||  ||||||||||| ||||    
T  21373914 aaattattcaatgccataaaaatttgtcctgtgt--------cttgtgttgtgctgttctgtcttgtattgttctgtccaatacttactgttttgca 21373826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 42636496 - 42636567
Alignment:
Q  27 taaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||| |||||| | ||| |||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  42636496 taaaacaaaaaattacttaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctgt 42636567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 24571274 - 24571173
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||||| |||||| ||||| ||||||||| |||||| ||| ||||| |||||| ||||||  |||||| | ||||| || ||||||| |||||||||    
T  24571274 ataaaacaacaaattactcaatgccataaaaaatttgtcatgtactgttctgccttatgttgtattgttctatcttatagtg-tctgtccagtacttact 24571176  T
Q  125 gtt 127  Q
    |||    
T  24571175 gtt 24571173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 44267745 - 44267691
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgct 70  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  44267745 caaaaatcatataaaacaaaaaattattgaatacgataaaaatttgtcttgtgct 44267691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 38213357 - 38213240
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| |||||| ||||||||| |||||  |||| || |||| ||| || ||||||||||| |    
T  38213357 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgcctaatgttatgttgttttgtcttgtactgttctgtac 38213258  T
Q  115 ggtacttactgttctgca 132  Q
      ||||||||||| ||||    
T  38213257 aatacttactgttttgca 38213240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 40094496 - 40094411
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttct 110  Q
    ||||||||| |||||| ||||| ||||||||| |||||| |||| |||| |||||||||||||  |||||| | || |||||||||    
T  40094496 ataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactgttct 40094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41694983 - 41695040
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  41694983 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgttctgtgctgtt 41695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25954454 - 25954407
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtc 63  Q
    |||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  25954454 caaaaagcgtataaaataaaaaattattcaatatcataaaaatttgtc 25954407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 28625001 - 28625064
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgcct 79  Q
    |||||| | ||||| |||| ||||||||||||||||||||| |||||| |||| |||| |||||    
T  28625001 caaaaatcttataagacaaaaaattattcaataccataaaagtttgtcttgtgttgttctgcct 28625064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 29646069 - 29645970
Alignment:
Q  16 caaaaagcatataaaacaagaaa-ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||| ||||| ||| ||||||||||||||| |||| |||| | |||| ||||||| |||| ||| || || ||||||||||    
T  29646069 caaaaatcgtataaaacaaaaaaattatttaatgccataaaaatttgtcttgtgatgttataccttatgttgtgttgttttgtcttgtattgttctgtcc 29645970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 45690983 - 45691093
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||||||||| |||| | || |  ||| | ||||| |||||||| || ||||||||| |||     
T  45690983 caaaaatcgtataaaacaa-aaattattcaatgctataaaaatttgtcatgtgttattctatcttatattgtgttgttctgtcttgtactgttctatcca 45691081  T
Q  116 gtacttactgtt 127  Q
    ||||||| ||||    
T  45691082 gtacttagtgtt 45691093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 26847307 - 26847271
Alignment:
Q  37 aattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  26847307 aattattcaataccataaaaatttgtcttgtgttgtt 26847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 54622878 - 54622926
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcc 64  Q
    |||||| | |||||||||| |||||||||||| ||||||||| ||||||    
T  54622878 caaaaatcgtataaaacaaaaaattattcaatgccataaaaaattgtcc 54622926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 3932933 - 3933027
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    ||||||| | |||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| | ||||||||||    
T  3932933 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgtcttgtgttgtactgttctatcttatactgtt 3933027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17867838 - 17867720
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  17867838 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtc 17867739  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17867738 cagtacttgctgttttgca 17867720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17877621 - 17877503
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  17877621 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtc 17877522  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17877521 cagtacttgctgttttgca 17877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32409978 - 32410096
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||||||||||||  ||||||| ||||||| ||||||||| ||||||||||||| ||||||| | |||||||||||||||    
T  32409978 tcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtc 32410077  T
Q  114 cggtacttactgttctgca 132  Q
      ||| |||||||| ||||    
T  32410078 tagtatttactgttttgca 32410096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 10324247 - 10324355
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| ||||| |||||||||| | |||||||||||  |||||| | || ||||||||||||||||||||||    
T  10324247 tataaaacaaaaaattactcaatcccataaaaaatttgttctgtgctgttctaccttgtgttgtaatgttctatcttgtactgttctgtccggtacttac 10324346  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  10324347 tgttttgca 10324355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10960002 - 10959886
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| | || ||||||| ||||||||||||||| |||| |||| ||||||||| |||| |||||||| || ||||||||| |||     
T  10960002 caaaaatcgtataaaacaaaatatcattcaatgccataaaaatttgtcatgtgttgttctgccttgtgctgtgatgttctgtcttgtactgttctatcca 10959903  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  10959902 gtacttactgttttgca 10959886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 15277407 - 15277519
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| | ||||||| ||||| ||||| |||||| ||||||||||| ||||||| | ||||||||||||||||    
T  15277407 caaaaatcgtataaaacaacaaattactcaatgctataaaaaatttgttctgtgttgttttaccttgtgttgtactgttctatcttatactgttctgtcc 15277506  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  15277507 agtacttactgtt 15277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 18597284 - 18597396
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| |  |||| |||| | ||| |||||||| |||||||  || |||||||||||||    
T  18597284 tcaaaaatcatataaaacaaaaaattattcaataccataaaaatttattatgtgttgttctacctagtgttgtgttgttctgctttgtactgttctgtcc 18597383  T
Q  115 ggtacttactgtt 127  Q
      |||||||||||    
T  18597384 aatacttactgtt 18597396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 24203356 - 24203248
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |  | |||||||||||||  ||||| |    
T  24203356 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgc 24203257  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  24203256 tgttttgca 24203248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 14925592 - 14925691
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  ||||||||||||  |||| ||||||||||||||||||| |||||||||||||| |||||| | || ||||||| ||||| |||||||||    
T  14925592 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttttactgttatgtcccgtacttact 14925691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 18057512 - 18057405
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  ||||||||||||  |||| |||||||||||||||| || ||||||||||||||||||||| | || ||||||||| |||  ||||||||    
T  18057512 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctattatgccttgtgttgtgctgttctatcttttactgttctatccaatacttact 18057413  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  18057412 gttttgca 18057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 17443264 - 17443166
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  ||||||||||||  |||| ||||||||||||||||||| |||||||||||||| |||||| | || |||||||||||||    
T  17443264 caaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttgtactgttctgtcc 17443166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 29814867 - 29814750
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| | |||| ||||| |||||||||  |||||||||| |||| ||||||||||||| ||||||| | || |||||||||||||    
T  29814867 caaaaatcgtataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 29814768  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  29814767 agtacttactgttttgca 29814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 11212249 - 11212142
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||||| |||||| ||||  |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||  ||||| ||    
T  11212249 ataaaacaaaaaattactcaaggccataaaacatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgct 11212150  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  11212149 gttttgca 11212142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 24242667 - 24242549
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||||||||||||| ||||||||||||| || || | | || ||||||||||||    
T  24242667 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactcttttatcttgtactgttctgtc 24242568  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  24242567 cagtacttgctgttttgca 24242549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14808127 - 14808223
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| |||||||||||||||||||||| || | |||||| ||||| |||||| | || |||||||||||    
T  14808127 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcctgtgctattctcccttgtattgtgttgttctttcttgtactgttctgt 14808223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 32132507 - 32132587
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  32132507 caaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 32132587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 2614899 - 2614792
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | |||||||||| ||||    
T  2614899 tcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttatactgttttgtc 2614800  T
Q  114 cggtactt 121  Q
    | ||||||    
T  2614799 cagtactt 2614792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 10485159 - 10485049
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||| |||||||||||| || ||| |||||| |||||||||||| | || ||||||||||| |     
T  10485159 caaaaatcgtataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttg-tttcccttgtattgtgctgttctttcttgtactgttctgtact 10485061  T
Q  116 gtacttactgtt 127  Q
    |||||| |||||    
T  10485060 gtacttgctgtt 10485049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 28502423 - 28502344
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||| |||||||||||| ||||    
T  28502423 aaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgca 28502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 15277063 - 15277181
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||| ||| |||| |||| |||||| |||||| ||||||| | || ||||||||||||    
T  15277063 tcaaaaatcttataaaacaaaaaattactcaatgccataaaatttttgtcatgtgttgttctgccttatgttgtactgttctatcttgtactgttctgtc 15277162  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  15277163 cagtacttgctgttttgca 15277181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 167051 - 167132
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||||||||||| |||||| |||||  ||||||| ||||||| ||||||||| ||||||||||||| |||||||||    
T  167051 aaaaatcatataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 167132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 32860033 - 32859940
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttct 129  Q
    |||||||||||||||||||||||||||  ||||||||| |||||| | ||||| ||| || | || ||||||| |||||  |||||||||||||    
T  32860033 aaattattcaataccataaaaatttgtattgtgctgttctgccttatattgtgttgtcctatcttgtactgttatgtccaatacttactgttct 32859940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 4494263 - 4494342
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||| |||| |||||| |||||||||||||| |  | ||||||||||||  |||||||||||| ||||    
T  4494263 aaaaatttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgca 4494342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 23636216 - 23636109
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||||||| |||||||||  |||| ||| | ||| |||||| ||||||| |||||||| || ||||||| | ||| ||| |||||    
T  23636216 tataaaacaaaaaattattcaatgccataaaaaactgtcatgtacagttctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttact 23636117  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  23636116 gttttgca 23636109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34176833 - 34176750
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || ||| |||||| |||||||||    
T  34176833 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttatgttgtactgttctgt 34176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11675501 - 11675618
Alignment:
Q  16 caaaaagcatataaaacaagaaa-ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||| ||||||||| | ||| ||||||||| |||||| |||| |||| ||||||| |||||||| || || |||| |||||    
T  11675501 caaaaatcgtataaaacaaaaaaattattcaatgctatagaaatttgtcatgtgctattttaccttttgttgtgttgttctgtcttgtattgttatgtcc 11675600  T
Q  115 ggtacttactgttctgca 132  Q
      ||||||||||| ||||    
T  11675601 aatacttactgttttgca 11675618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 31870236 - 31870319
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||||||||| ||||||||||||||| |||| |||| | |||| | ||||| |||||| | || |||||||    
T  31870236 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgtt 31870319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 32805442 - 32805363
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||| ||||||||| |||||||||||||  |||||| | || ||||||| ||||| |||||| ||||| ||||    
T  32805442 aaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgca 32805363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 29054359 - 29054254
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  ||||||||||||||||| ||||||| || ||||||||| || ||| ||||||| ||| || | || ||||||| |||||     
T  29054359 caaaaatcatataatacagaaaattattcaataccat-aaaatttatcttgtgctgttctgtcttatgttgtgttgtcctatcttgtactgttatgtcca 29054261  T
Q  116 gtactta 122  Q
    |||||||    
T  29054260 gtactta 29054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 3259686 - 3259581
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt------gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||      ||| |||| |||| ||||||||||||| ||||||| | || |||||||    
T  3259686 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgtt 3259587  T
Q  109 ctgtcc 114  Q
    ||||||    
T  3259586 ctgtcc 3259581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 7396270 - 7396302
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtg 68  Q
    |||||||||||||||||||||||||||| ||||    
T  7396270 aaattattcaataccataaaaatttgtcatgtg 7396302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 43050 - 43159
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||  | || |||||||| ||||||||||||| ||| ||||| ||||||  |||||||    
T  43050 catataaaacaagaaattattcaataccacaaaaatttgatctgtattattatgccttgtattgtgctgttctgcattgtactgctctgtctagtactta 43149  T
Q  123 ctgttctgca 132  Q
    ||||| ||||    
T  43150 ctgttttgca 43159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 101942 - 101834
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||| | |||| | |||| ||||||| | ||||||||||||||||||||||| |    
T  101942 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctaccttatattgtactgttctatcttatactgttctgtccggtacttgc 101843  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  101842 tgttttgca 101834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 4682 - 4772
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  4682 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 4772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 1744 - 1814
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| |||| |  ||||||||||||||||    
T  1744 catataaaacaaaaaattattcaataccataaaaatttgttctgtgttgttctctcttgtgttgtgctgtt 1814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 23580 - 23462
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||| |||||||| |||||||||||||  |||||| | || ||||||||||||    
T  23580 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtc 23481  T
Q  114 cggtacttactgttctgca 132  Q
    | ||| || ||||| ||||    
T  23480 cagtatttgctgttttgca 23462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 2441 - 2549
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| |||||  ||||||| ||||||| ||||||||| ||||||||||||| || |||| | || ||||||||||||| |||||| |    
T  2441 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgc 2540  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  2541 tgttttgca 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 51442 - 51324
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| ||||||||| || ||||| || | ||||||| |||| ||||||||||||    
T  51442 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcttgtgctgttctgtcttgtattatactgttctatattgtactgttctgtc 51343  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  51342 cagtacttgctgttttgca 51324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 15174 - 15057
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcc-tgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||  ||| | | |||| |||| |||||| |||||| ||||||| | || |||||||||||||    
T  15174 caaaaatcttataaaacaacaaattactcaatgccataaattttttttcatgtgttgttctgccttatgttgtactgttctattttgtactgttctgtcc 15075  T
Q  115 ggtacttactgttctgca 132  Q
    ||||||||||||| ||||    
T  15074 ggtacttactgttttgca 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 15470 - 15553
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| ||| |||||||||||| ||||||||||||| |||||||||    
T  15470 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctgt 15553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 12629 - 12747
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| | |||||| ||||||| ||||||||| || | |||||||| ||||||| | || ||||||||| ||    
T  12629 tcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatc 12728  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  12729 cagtacttgctgttttgca 12747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 18147 - 18265
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| | |||||| ||||||| ||||||||| || | |||||||| ||||||| | || ||||||||| ||    
T  18147 tcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatc 18246  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18247 cagtacttgctgttttgca 18265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19183 - 19262
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||| | ||||||||| | ||||||||||| |||||    
T  19183 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccatgtgctgttctaccttgtgttgtactgtt 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 2589 - 2695
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||||||  ||||  ||||||| ||||||| |||| |||| | |||||||||||  |||||| | |||||||||| |||||    
T  2589 caaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttatactgttatgtcc 2688  T
Q  115 ggtactt 121  Q
     ||||||    
T  2689 agtactt 2695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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