View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4989_high_19 (Length: 250)
Name: NF4989_high_19
Description: NF4989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4989_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 32745631 - 32745855
Alignment:
| Q |
10 |
aagaaaatcaagggaattttcggaaaaagaggggcacgcgacaaaggaaagaatttcacaaacttttaataatgagattttcaatgatgttaagtggttg |
109 |
Q |
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| T |
32745631 |
aagaaaatcaagggaattttcggaaaaagaggggcacgcgacaaaggaaagaatttcacaaacttttaataatgagattttcaatgatgttaagtggtta |
32745730 |
T |
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| Q |
110 |
gatttgaagattcttagctacatttattccattcttcagttcgtcaccaactttagctccaagttctgattgagtcctccaaatacaacatgacaccact |
209 |
Q |
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| T |
32745731 |
gatttgaagattcttagctacatttattccattcttcagttcgtcaccaactttagctccaagttctgattgagtcctccaaatacaacatgacaccact |
32745830 |
T |
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| Q |
210 |
tttgtagtacaaaagctcattattt |
234 |
Q |
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||||||||||||||||||||||||| |
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| T |
32745831 |
tttgtagtacaaaagctcattattt |
32745855 |
T |
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