View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4989_low_14 (Length: 316)

Name: NF4989_low_14
Description: NF4989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4989_low_14
NF4989_low_14
[»] chr1 (46 HSPs)
chr1 (16-124)||(6029464-6029572)
chr1 (16-127)||(15540053-15540164)
chr1 (15-132)||(42510419-42510537)
chr1 (15-132)||(844886-845004)
chr1 (16-132)||(11772795-11772911)
chr1 (25-132)||(24339809-24339917)
chr1 (16-132)||(50304546-50304662)
chr1 (38-132)||(38087181-38087275)
chr1 (16-132)||(50540238-50540355)
chr1 (16-132)||(10384262-10384378)
chr1 (16-132)||(25539750-25539866)
chr1 (16-132)||(31004027-31004143)
chr1 (15-121)||(6711208-6711315)
chr1 (15-97)||(26118377-26118460)
chr1 (15-132)||(7183812-7183930)
chr1 (15-124)||(12890140-12890250)
chr1 (15-132)||(16386748-16386866)
chr1 (15-132)||(16451021-16451139)
chr1 (16-121)||(42512933-42513038)
chr1 (16-132)||(39281789-39281905)
chr1 (25-132)||(41972806-41972914)
chr1 (15-133)||(45491037-45491156)
chr1 (15-132)||(1351597-1351714)
chr1 (15-132)||(46154794-46154912)
chr1 (16-132)||(17887841-17887958)
chr1 (15-127)||(28340465-28340578)
chr1 (16-93)||(45658755-45658832)
chr1 (16-112)||(6144149-6144245)
chr1 (25-132)||(16476327-16476434)
chr1 (41-132)||(26764978-26765069)
chr1 (25-114)||(51264407-51264497)
chr1 (16-124)||(17327812-17327921)
chr1 (15-132)||(38663027-38663144)
chr1 (25-132)||(51703334-51703442)
chr1 (15-132)||(35387473-35387591)
chr1 (15-132)||(44738203-44738321)
chr1 (25-132)||(41968021-41968129)
chr1 (15-97)||(30105842-30105925)
chr1 (16-88)||(13994237-13994310)
chr1 (15-72)||(16437317-16437374)
chr1 (25-90)||(21071661-21071726)
chr1 (25-97)||(51374486-51374558)
chr1 (25-95)||(20495063-20495134)
chr1 (15-97)||(34663856-34663939)
chr1 (15-58)||(50382565-50382608)
chr1 (36-132)||(8838833-8838929)
[»] chr5 (37 HSPs)
chr5 (16-132)||(37148668-37148784)
chr5 (16-124)||(18470522-18470630)
chr5 (15-112)||(31770684-31770782)
chr5 (15-124)||(32528608-32528718)
chr5 (15-127)||(40182354-40182467)
chr5 (16-127)||(41790556-41790668)
chr5 (15-127)||(6284392-6284505)
chr5 (16-132)||(7725903-7726019)
chr5 (16-132)||(7770373-7770489)
chr5 (24-124)||(32093083-32093183)
chr5 (25-132)||(4689801-4689908)
chr5 (15-97)||(29241298-29241381)
chr5 (15-132)||(2351565-2351683)
chr5 (15-132)||(20119656-20119776)
chr5 (15-132)||(35701162-35701280)
chr5 (16-125)||(39918399-39918509)
chr5 (25-97)||(24181727-24181800)
chr5 (16-112)||(3735263-3735359)
chr5 (25-132)||(4818243-4818351)
chr5 (16-127)||(5673034-5673146)
chr5 (25-132)||(34794772-34794880)
chr5 (53-132)||(7523056-7523135)
chr5 (25-127)||(8136729-8136832)
chr5 (31-114)||(35954917-35955000)
chr5 (16-85)||(5571736-5571806)
chr5 (16-97)||(39788112-39788194)
chr5 (16-132)||(24036118-24036232)
chr5 (16-114)||(22493512-22493611)
chr5 (15-97)||(41459509-41459592)
chr5 (15-132)||(11963226-11963344)
chr5 (17-95)||(31644369-31644447)
chr5 (25-97)||(31880179-31880252)
chr5 (18-87)||(700697-700767)
chr5 (25-63)||(14011549-14011587)
chr5 (51-97)||(22432435-22432481)
chr5 (15-127)||(28090613-28090724)
chr5 (25-132)||(21739264-21739367)
[»] chr7 (48 HSPs)
chr7 (16-132)||(329360-329476)
chr7 (16-126)||(48445417-48445527)
chr7 (15-132)||(18470573-18470691)
chr7 (15-132)||(36769657-36769775)
chr7 (27-132)||(3892126-3892232)
chr7 (15-132)||(10932645-10932763)
chr7 (15-132)||(11321973-11322091)
chr7 (15-132)||(47947649-47947767)
chr7 (15-132)||(47953079-47953197)
chr7 (25-132)||(26994323-26994431)
chr7 (15-132)||(3922791-3922909)
chr7 (15-132)||(32873857-32873975)
chr7 (16-132)||(34295493-34295609)
chr7 (15-85)||(11250558-11250629)
chr7 (41-132)||(11822121-11822212)
chr7 (25-127)||(30599106-30599209)
chr7 (25-132)||(43368091-43368198)
chr7 (15-93)||(43214013-43214091)
chr7 (25-121)||(12982203-12982300)
chr7 (16-132)||(21784760-21784877)
chr7 (16-121)||(26652767-26652872)
chr7 (16-132)||(30849335-30849452)
chr7 (16-113)||(48894626-48894723)
chr7 (16-124)||(22724121-22724229)
chr7 (16-124)||(22724620-22724728)
chr7 (24-127)||(41665672-41665775)
chr7 (15-127)||(26371897-26372010)
chr7 (16-132)||(43189332-43189449)
chr7 (25-121)||(1363538-1363634)
chr7 (16-112)||(9913435-9913531)
chr7 (16-112)||(9927123-9927219)
chr7 (25-132)||(41211299-41211407)
chr7 (25-124)||(37966872-37966971)
chr7 (15-97)||(40753079-40753162)
chr7 (15-132)||(43158774-43158892)
chr7 (15-132)||(46633586-46633704)
chr7 (25-108)||(1870047-1870131)
chr7 (38-94)||(29455957-29456013)
chr7 (28-87)||(15035354-15035413)
chr7 (16-88)||(16028013-16028084)
chr7 (28-124)||(23349392-23349488)
chr7 (36-132)||(26910517-26910612)
chr7 (25-93)||(46448742-46448810)
chr7 (36-95)||(14608501-14608560)
chr7 (15-132)||(18386414-18386532)
chr7 (16-97)||(29661247-29661329)
chr7 (16-82)||(34117392-34117458)
chr7 (53-132)||(20127177-20127254)
[»] scaffold0280 (1 HSPs)
scaffold0280 (16-132)||(13781-13897)
[»] chr8 (45 HSPs)
chr8 (16-114)||(29611158-29611256)
chr8 (16-132)||(15001352-15001469)
chr8 (16-132)||(35225548-35225664)
chr8 (15-132)||(8673157-8673275)
chr8 (25-132)||(37618504-37618611)
chr8 (15-132)||(3251758-3251876)
chr8 (15-132)||(32303687-32303805)
chr8 (15-132)||(45446340-45446458)
chr8 (15-132)||(32020103-32020221)
chr8 (15-132)||(41709662-41709780)
chr8 (16-127)||(13407038-13407150)
chr8 (15-121)||(27103855-27103962)
chr8 (15-132)||(31731949-31732067)
chr8 (15-124)||(34101401-34101511)
chr8 (15-121)||(6386472-6386579)
chr8 (16-123)||(40388935-40389042)
chr8 (15-132)||(31513685-31513803)
chr8 (15-114)||(5968966-5969066)
chr8 (16-108)||(22999167-22999259)
chr8 (16-132)||(45113941-45114057)
chr8 (36-127)||(6460154-6460245)
chr8 (16-95)||(7591550-7591629)
chr8 (15-121)||(34063024-34063131)
chr8 (15-97)||(37664385-37664468)
chr8 (15-127)||(29672425-29672538)
chr8 (16-97)||(30501066-30501147)
chr8 (15-97)||(4052402-4052483)
chr8 (16-95)||(10466987-10467066)
chr8 (36-127)||(16595272-16595363)
chr8 (16-95)||(37474642-37474721)
chr8 (16-95)||(41548541-41548620)
chr8 (15-112)||(29563328-29563426)
chr8 (16-97)||(30543125-30543207)
chr8 (16-80)||(16485912-16485976)
chr8 (53-132)||(17805575-17805654)
chr8 (36-97)||(37861801-37861863)
chr8 (25-127)||(25478138-25478236)
chr8 (36-108)||(4599572-4599644)
chr8 (16-114)||(12753428-12753527)
chr8 (25-95)||(10656798-10656868)
chr8 (54-132)||(21272598-21272676)
chr8 (36-73)||(9624182-9624219)
chr8 (25-97)||(14005156-14005229)
chr8 (51-112)||(17520507-17520568)
chr8 (25-73)||(39642828-39642876)
[»] chr4 (66 HSPs)
chr4 (16-124)||(3649533-3649641)
chr4 (16-132)||(22318465-22318581)
chr4 (16-124)||(26083235-26083343)
chr4 (16-124)||(9807053-9807161)
chr4 (13-132)||(49152177-49152297)
chr4 (15-132)||(21579914-21580032)
chr4 (15-132)||(29785617-29785735)
chr4 (15-132)||(55065413-55065530)
chr4 (15-121)||(56154520-56154627)
chr4 (15-132)||(20802611-20802729)
chr4 (15-132)||(24002226-24002344)
chr4 (15-132)||(43640987-43641105)
chr4 (16-132)||(14296485-14296602)
chr4 (16-132)||(2786853-2786969)
chr4 (16-127)||(14314738-14314850)
chr4 (36-124)||(50729627-50729715)
chr4 (15-106)||(53200724-53200815)
chr4 (25-114)||(6776484-6776574)
chr4 (15-132)||(23521768-23521886)
chr4 (16-86)||(39078596-39078666)
chr4 (16-121)||(37695622-37695727)
chr4 (16-93)||(44324423-44324500)
chr4 (25-132)||(37865641-37865749)
chr4 (16-132)||(50178574-50178690)
chr4 (16-132)||(52949610-52949725)
chr4 (15-97)||(33552922-33553005)
chr4 (16-124)||(21202636-21202745)
chr4 (16-108)||(7555038-7555130)
chr4 (16-92)||(29592824-29592900)
chr4 (16-112)||(47642572-47642668)
chr4 (16-132)||(50186417-50186533)
chr4 (36-127)||(7001748-7001839)
chr4 (16-127)||(30942682-30942793)
chr4 (25-132)||(37931809-37931916)
chr4 (16-132)||(33177113-33177230)
chr4 (25-97)||(47361499-47361572)
chr4 (36-132)||(52319214-52319311)
chr4 (25-108)||(20518112-20518196)
chr4 (27-132)||(12600774-12600880)
chr4 (15-87)||(24210251-24210324)
chr4 (36-93)||(52673756-52673813)
chr4 (25-97)||(53343567-53343640)
chr4 (15-86)||(11055977-11056048)
chr4 (15-132)||(9512420-9512538)
chr4 (15-83)||(2725212-2725281)
chr4 (25-97)||(29616093-29616166)
chr4 (15-95)||(54542915-54542996)
chr4 (36-112)||(7381189-7381265)
chr4 (25-132)||(38486347-38486450)
chr4 (39-127)||(47669208-47669296)
chr4 (16-87)||(985217-985287)
chr4 (17-76)||(10586989-10587047)
chr4 (25-87)||(36743778-36743841)
chr4 (15-73)||(50727993-50728052)
chr4 (15-73)||(50736007-50736066)
chr4 (15-113)||(55593792-55593891)
chr4 (23-73)||(10184877-10184927)
chr4 (16-121)||(44649245-44649348)
chr4 (25-62)||(41711806-41711843)
chr4 (17-73)||(46680592-46680649)
chr4 (24-87)||(20694304-20694368)
chr4 (25-73)||(32181211-32181259)
chr4 (25-61)||(32858283-32858319)
chr4 (16-87)||(34929848-34929920)
chr4 (16-76)||(42772703-42772763)
chr4 (25-97)||(43189852-43189924)
[»] chr2 (44 HSPs)
chr2 (16-112)||(6896074-6896170)
chr2 (16-124)||(30712751-30712859)
chr2 (15-132)||(9733017-9733135)
chr2 (15-132)||(13829324-13829441)
chr2 (15-132)||(40692190-40692308)
chr2 (15-121)||(34338706-34338813)
chr2 (15-132)||(5278921-5279039)
chr2 (15-132)||(18685721-18685839)
chr2 (15-132)||(32497800-32497918)
chr2 (15-132)||(33366495-33366613)
chr2 (16-132)||(3913548-3913664)
chr2 (15-121)||(30326418-30326525)
chr2 (15-132)||(17540599-17540717)
chr2 (15-132)||(35114670-35114788)
chr2 (15-97)||(33889163-33889246)
chr2 (15-132)||(37003955-37004074)
chr2 (15-132)||(2085957-2086075)
chr2 (15-132)||(4641401-4641519)
chr2 (15-132)||(19513776-19513894)
chr2 (15-132)||(39461199-39461317)
chr2 (53-122)||(26981816-26981885)
chr2 (15-110)||(2645173-2645269)
chr2 (15-121)||(16104170-16104277)
chr2 (25-132)||(28824654-28824761)
chr2 (16-113)||(1247060-1247157)
chr2 (25-121)||(7258792-7258889)
chr2 (15-132)||(30798576-30798692)
chr2 (16-95)||(32766593-32766672)
chr2 (25-122)||(18793358-18793456)
chr2 (36-121)||(37308552-37308638)
chr2 (36-124)||(38993179-38993264)
chr2 (16-132)||(16177971-16178085)
chr2 (28-97)||(27462900-27462969)
chr2 (25-132)||(26418808-26418916)
chr2 (17-132)||(42365462-42365578)
chr2 (15-132)||(42706243-42706362)
chr2 (15-85)||(44284561-44284632)
chr2 (40-113)||(16062188-16062261)
chr2 (41-113)||(40832584-40832656)
chr2 (25-71)||(10399967-10400013)
chr2 (25-97)||(11114793-11114865)
chr2 (16-97)||(12939388-12939471)
chr2 (23-59)||(38623395-38623431)
chr2 (16-132)||(41934467-41934583)
[»] scaffold0025 (1 HSPs)
scaffold0025 (16-132)||(5534-5650)
[»] chr3 (39 HSPs)
chr3 (16-132)||(51925290-51925406)
chr3 (17-132)||(51259863-51259979)
chr3 (15-132)||(28675676-28675794)
chr3 (36-132)||(22484845-22484941)
chr3 (15-97)||(34026588-34026671)
chr3 (25-132)||(50386547-50386654)
chr3 (15-132)||(4851537-4851655)
chr3 (15-132)||(26282468-26282586)
chr3 (16-132)||(3864756-3864873)
chr3 (16-121)||(31883104-31883209)
chr3 (16-132)||(3867731-3867842)
chr3 (16-132)||(25860503-25860620)
chr3 (15-114)||(12349252-12349352)
chr3 (15-121)||(5442188-5442295)
chr3 (15-121)||(25927408-25927515)
chr3 (25-126)||(21221451-21221553)
chr3 (15-132)||(53557876-53557994)
chr3 (16-132)||(3964175-3964292)
chr3 (15-95)||(44116862-44116943)
chr3 (16-108)||(10747128-10747220)
chr3 (15-97)||(20609729-20609812)
chr3 (15-121)||(53046722-53046829)
chr3 (15-132)||(2134956-2135074)
chr3 (15-132)||(29584761-29584879)
chr3 (15-132)||(43175455-43175573)
chr3 (16-132)||(33364860-33364976)
chr3 (36-132)||(21373826-21373914)
chr3 (27-97)||(42636496-42636567)
chr3 (26-127)||(24571173-24571274)
chr3 (16-70)||(44267691-44267745)
chr3 (16-132)||(38213240-38213357)
chr3 (26-110)||(40094411-40094496)
chr3 (16-73)||(41694983-41695040)
chr3 (16-63)||(25954407-25954454)
chr3 (16-79)||(28625001-28625064)
chr3 (16-114)||(29645970-29646069)
chr3 (16-127)||(45690983-45691093)
chr3 (37-73)||(26847271-26847307)
chr3 (16-64)||(54622878-54622926)
[»] chr6 (32 HSPs)
chr6 (15-108)||(3932933-3933027)
chr6 (15-132)||(17867720-17867838)
chr6 (15-132)||(17877503-17877621)
chr6 (15-132)||(32409978-32410096)
chr6 (25-132)||(10324247-10324355)
chr6 (16-132)||(10959886-10960002)
chr6 (16-127)||(15277407-15277519)
chr6 (15-127)||(18597284-18597396)
chr6 (25-132)||(24203248-24203356)
chr6 (25-124)||(14925592-14925691)
chr6 (25-132)||(18057405-18057512)
chr6 (16-114)||(17443166-17443264)
chr6 (16-132)||(29814750-29814867)
chr6 (26-132)||(11212142-11212249)
chr6 (15-132)||(24242549-24242667)
chr6 (16-112)||(14808127-14808223)
chr6 (16-95)||(32132507-32132587)
chr6 (15-121)||(2614792-2614899)
chr6 (16-127)||(10485049-10485159)
chr6 (53-132)||(28502344-28502423)
chr6 (15-132)||(15277063-15277181)
chr6 (17-97)||(167051-167132)
chr6 (36-129)||(32859940-32860033)
chr6 (53-132)||(4494263-4494342)
chr6 (25-132)||(23636109-23636216)
chr6 (15-97)||(34176750-34176833)
chr6 (16-132)||(11675501-11675618)
chr6 (25-108)||(31870236-31870319)
chr6 (53-132)||(32805363-32805442)
chr6 (16-122)||(29054254-29054359)
chr6 (15-114)||(3259581-3259686)
chr6 (36-68)||(7396270-7396302)
[»] scaffold0050 (1 HSPs)
scaffold0050 (23-132)||(43050-43159)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-132)||(101834-101942)
[»] scaffold0729 (1 HSPs)
scaffold0729 (25-114)||(4682-4772)
[»] scaffold0650 (1 HSPs)
scaffold0650 (23-93)||(1744-1814)
[»] scaffold0054 (1 HSPs)
scaffold0054 (15-132)||(23462-23580)
[»] scaffold0208 (1 HSPs)
scaffold0208 (25-132)||(2441-2549)
[»] scaffold0098 (1 HSPs)
scaffold0098 (15-132)||(51324-51442)
[»] scaffold0027 (1 HSPs)
scaffold0027 (16-132)||(15057-15174)
[»] scaffold0360 (1 HSPs)
scaffold0360 (15-97)||(15470-15553)
[»] scaffold0169 (2 HSPs)
scaffold0169 (15-132)||(12629-12747)
scaffold0169 (15-132)||(18147-18265)
[»] scaffold0181 (1 HSPs)
scaffold0181 (15-93)||(19183-19262)
[»] scaffold0957 (1 HSPs)
scaffold0957 (16-121)||(2589-2695)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 6029464 - 6029572
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||     
T  6029464 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgctgtcca 6029563  T
Q  116 gtacttact 124  Q
    |||||||||    
T  6029564 gtacttact 6029572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 15540053 - 15540164
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||||| ||| |||||||||||||     
T  15540053 caaaaatcatataaaacaaaaaattattcaataccataaaaacttgtcatgtgttgttatgccttgtgttgtgctgttctgcattgtactgttctgtcca 15540152  T
Q  116 gtacttactgtt 127  Q
    ||||||||||||    
T  15540153 gtacttactgtt 15540164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 42510537 - 42510419
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  42510537 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 42510438  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  42510437 cagtacttactgttttgca 42510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 844886 - 845004
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  844886 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 844985  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  844986 cagtacttgctgttttgca 845004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11772795 - 11772911
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||| |||||| ||||||||||||||||||||||| || |||||||||||||| |||| ||| || ||||||| |||||     
T  11772795 caaaaatcgtataaaacaaaaaataattcaaaaccataaaaatttgtcctgtgctattctgccttgtgttgtgttgttatgtcttgtactgttatgtcca 11772894  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  11772895 gtacttaccgttttgca 11772911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 24339809 - 24339917
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||| ||| || |    
T  24339809 tataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtatttgc 24339908  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  24339909 tgttttgca 24339917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50304662 - 50304546
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| |     
T  50304662 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtact 50304563  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  50304562 gtacttgctgttttgca 50304546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 38087181 - 38087275
Alignment:
Q  38 attattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||| || ||||||| ||||| ||||||| |||| ||||    
T  38087181 attattcaatgccataaaaatttgtcctgtgctgttctgccttatgttgtactgttctgtcttgtactgttatgtccagtacttaatgttttgca 38087275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50540355 - 50540238
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||| |||||| ||||| ||||||||| |||| ||||||||||| || | |||||||| ||||||| | |||||||||||||||     
T  50540355 caaaaatcatataaaacaacaaattactcaatgccataaaaaatttgccctgtgctgttctgacgtgtgttgtactgttctatcttatactgttctgtca 50540256  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  50540255 agtacttactgttttgca 50540238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10384378 - 10384262
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||| ||| ||||||||| ||||||||||||||| || || ||||||| || ||     
T  10384378 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtccagtgttgttttgccctgtgttgtgctgttcggtcttgtactgttatgccca 10384279  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  10384278 gtacttactgttttgca 10384262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 25539866 - 25539750
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||  |||||||||||||||||||||| || |||||||||||||  |||| ||| || ||||||| |||||     
T  25539866 caaaaatcgtataaaacaaaaaattattcaaagccataaaaatttgtcctgtgctattctgccttgtgttgtattgttatgtcttgtactgttatgtcca 25539767  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  25539766 gtacttaccgttttgca 25539750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 31004143 - 31004027
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| | |||||| ||| |||||||| | || ||||||||||| |     
T  31004143 caaaaatcctataaaacaaaaaattattcaatgccataaaaatttgtcctgtgatgttctcccttgtattgcgctgttctttcttgtactgttctgtaca 31004044  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  31004043 gtacttgctgttttgca 31004027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 6711208 - 6711315
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  6711208 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttgtgttgtactgttctattttgtactgttctgtc 6711307  T
Q  114 cggtactt 121  Q
    | ||||||    
T  6711308 cagtactt 6711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 26118377 - 26118460
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  26118377 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 26118460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 7183930 - 7183812
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||  |||| || |||||||||| ||||||| | || ||||||||||||    
T  7183930 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtattgttctgtcttgtgttgtactgttctatcttgtactgttctgtc 7183831  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  7183830 cagtacttactgttttgca 7183812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 12890250 - 12890140
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||| |||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  12890250 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 12890151  T
Q  114 cggtacttact 124  Q
      |||||||||    
T  12890150 tagtacttact 12890140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16386866 - 16386748
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||||| |||| ||||||| | || ||||||||||||    
T  16386866 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtattgtactgttctatcttgtactgttctgtc 16386767  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  16386766 caatacttgctgttttgca 16386748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 16451139 - 16451021
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||||| || |||| |||||||| || |||| | || ||||||||||||    
T  16451139 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgccatgtgttgtactattctatcttgtactgttctgtc 16451040  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  16451039 cagtacttactgttttgca 16451021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 42512933 - 42513038
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||   ||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| |     
T  42512933 caaaaatcgtataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtact 42513032  T
Q  116 gtactt 121  Q
    ||||||    
T  42513033 gtactt 42513038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 39281905 - 39281789
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  ||||||||||||  |||| ||| ||||| |||| |||| ||| ||||||||||||||||| | ||||||| ||||||||     
T  39281905 caaaaatcgtataaaacataaaattattcaatgtcatacaaagttgtcatgtgttgttatgcattgtgttgtgctgttctatcttatactattctgtcca 39281806  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  39281805 gtacttactgttttgca 39281789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 41972914 - 41972806
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| | ||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||| |||||| |    
T  41972914 tataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttgc 41972815  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41972814 tgttttgca 41972806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 45491037 - 45491156
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||  |||||| | ||||| |||||||||    
T  45491037 tcaaaaatcgtataaaacaaaaaattactcaatgccatacaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttatattgttctgtc 45491136  T
Q  114 cggtacttactgttctgcat 133  Q
    | ||| || ||||| |||||    
T  45491137 cagtaattgctgttttgcat 45491156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 1351597 - 1351714
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||| | ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  1351597 tcaaaaatcatataaaacaaaaaat-actcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 1351695  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  1351696 aagtacttactgttttgca 1351714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 46154912 - 46154794
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||||||||||||  |||||||| |||||| ||||| ||| || |||||||| | ||||||| | |||||||||| ||||    
T  46154912 tcaaaaatcttataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgccgttatgtcttgtgttatactgttctatcttatactgttttgtc 46154813  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  46154812 cagtacttactgttttgca 46154794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 17887958 - 17887841
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| |||||||||||||  |||||| | || |||| ||||||||    
T  17887958 caaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactattctgtcc 17887859  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  17887858 cgtacttactgttttgca 17887841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28340465 - 28340578
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||  ||||| ||| ||||| ||||||||||||| ||||||| | || ||||||||||||    
T  28340465 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtc 28340564  T
Q  114 cggtacttactgtt 127  Q
    |  |||||||||||    
T  28340565 caatacttactgtt 28340578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 45658832 - 45658755
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||| |||||||||||| |||||||||||  ||||||||||||||| |||||| || || ||||||||||||||||    
T  45658832 caaaaatcatataaaacaaaaaattattcaaagccataaaaatttgtcatgtgctattctgtcttgtgttgtgctgtt 45658755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 6144149 - 6144245
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| |||||||||||  |||||||||||||||||||||||||||| |||| |||| |||||| ||||||| ||  || | || |||||||||||    
T  6144149 caaaaatcatataaaacagaaaattattcaataccataaaaatttgtcttgtgatgttctgccttatgttgtgttgccctatcttgtactgttctgt 6144245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 16476327 - 16476434
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  |||||||||||| ||||| ||||||||| |||| |||| |||||| ||| ||| |||||| | ||||| |||| ||||| |||||||||    
T  16476327 tataaaacataaaattattcaatgccatacaaatttgtcatgtggtgttatgccttatgtcgtgttgttctatcttatattgttatgtccagtacttact 16476426  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  16476427 gttttgca 16476434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 26764978 - 26765069
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||| | ||||||||||||||| |  |||| |||||||||||||| |||||| | || ||||||||||||| |||||||||||| ||||    
T  26764978 attcaatgctataaaaatttgtcctatattgttctgccttgtgttgtgttgttctatcttgtactgttctgtccagtacttactgttttgca 26765069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 51264497 - 51264407
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| ||||||||| ||||||||||||| || || |||||||||| ||||||| | || |||||||||||||    
T  51264497 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctattctgtcttgtgttgtactgttctatcttgtactgttctgtcc 51264407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 17327812 - 17327921
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||  |||||||| ||||||||| || |||| |||||||| |||| ||||||| | ||||||||||||||||    
T  17327812 caaaaatcgtataaaacaacaaattactcaacgccataaaaaatttgtcctatgttgttctgccttgtattgtactgttctatcttatactgttctgtcc 17327911  T
Q  115 ggtacttact 124  Q
      ||||||||    
T  17327912 aatacttact 17327921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 38663144 - 38663027
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||| | ||||| |||||| | || ||||||| ||| |    
T  38663144 tcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttatattgtgttgttctttcttgtactgttttgtac 38663045  T
Q  115 ggtacttactgttctgca 132  Q
     |||||| ||||| ||||    
T  38663044 tgtacttgctgttttgca 38663027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 51703334 - 51703442
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||  |||||||||||||||||| ||||| | | || ||||||| ||||| |||||| |    
T  51703334 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtattgttttgccttgtgttgttctgttatatcttgtactgttttgtccagtacttgc 51703433  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  51703434 tgttttgca 51703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 35387473 - 35387591
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| | ||||||||||| ||||||| | || || | || ||||    
T  35387473 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctaccttgtgttgtactgttctatcttgtattattatgtc 35387572  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35387573 cagtacttgctgttttgca 35387591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 44738203 - 44738321
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | |||||||||||  |||||| | || ||||||||||||    
T  44738203 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttctactgttctgtc 44738302  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  44738303 tagtacttgctgttttgca 44738321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 41968021 - 41968129
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||| |  ||||||| ||||||| |||  ||||  ||||||||||||| |||||||| || ||||||||||||| | ||||||    
T  41968021 tataaaacaaaaaattactcattgtcataaaaaatttgtcatgtattgttccgccttgtgttgtgttgttctgtcttgtactgttctgtccagcacttac 41968120  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41968121 tgttttgca 41968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 30105842 - 30105925
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| | ||| |||||||| |||||||| ||| |||| ||||||||||||| |||||||||    
T  30105842 tcaaaaatcgtataaaacaaaaaattacttaatgccataaaaaatttgtccagtgttgttctgccttgtgttgtactgttctgt 30105925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 13994237 - 13994310
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtg 88  Q
    |||||| |||||||||||  ||||||||||||| |||| |||||||||| |||| |||| |||||||| |||||    
T  13994237 caaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgttgttctgccttgtattgtg 13994310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 16437374 - 16437317
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgt 72  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||||||||| ||||    
T  16437374 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtactgt 16437317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 21071726 - 21071661
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgct 90  Q
    |||||||||| ||||||||||||   ||||||||||||| |||  |||| ||||||||||||||||    
T  21071726 tataaaacaaaaaattattcaatgtaataaaaatttgtcatgtattgttctgccttgtgttgtgct 21071661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 51374486 - 51374558
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| || ||||||||||||| ||||||| |||| | | ||||||| |  ||||||||||||||||||||    
T  51374486 tataaaataaaaaattattcaatatcataaaattttgccatctgctgttctaacttgtgttgtgctgttctgt 51374558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 20495063 - 20495134
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||||||| |||||| |||||  ||||||| ||||||| ||||||||| |||||| |||||| |||||||    
T  20495063 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttatgttgtactgttct 20495134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34663939 - 34663856
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| | ||| |||| ||||||||||| |||||| || | |||| |||||| |||||||||    
T  34663939 tcaaaaatcatataaaacaaaaaattacttaatgccataaaaaatttgtcatgtgctcttctaccttatgttgtactgttctgt 34663856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 50382565 - 50382608
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat 58  Q
    ||||||| |||||||||||| | |||||||||||||||||||||    
T  50382565 tcaaaaatcatataaaacaaaatattattcaataccataaaaat 50382608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 8838929 - 8838833
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| | ||||||||||||  |||| | || |  ||||||||||| |||||||| |||||| ||| ||||  ||| |||||||| ||||    
T  8838929 aaattattcaatgctataaaaatttgttatgtgtttttctatcttgtgttgtgttgttctgtcttatacagttatgtctagtatttactgttttgca 8838833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 37148668 - 37148784
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||     
T  37148668 caaaaagaatataaaataagaaattattcaataccataaaaatttgtcctgtgctgttataccttgtgttgtgctgttctgtattatactgttttgtcca 37148767  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  37148768 gtacttactgttttgca 37148784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 18470522 - 18470630
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||| ||||||||||||| |||||||||| ||||||     
T  18470522 caaaaagcatataaaacaagaaattattcaataccataaaaatttgttctgtgctgttatgtcttgtattgtgctgttctgcattatactgtgctgtcca 18470621  T
Q  116 gtacttact 124  Q
    |||||||||    
T  18470622 gtacttact 18470630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 31770684 - 31770782
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | ||||||||||||||    
T  31770684 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctgt 31770782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 32528718 - 32528608
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| ||||||||| |||||| |||||| ||||||| | || ||||||||||||    
T  32528718 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtc 32528619  T
Q  114 cggtacttact 124  Q
    | |||||||||    
T  32528618 cagtacttact 32528608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 40182467 - 40182354
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||||||||||||||||| ||||||| | || || |||||||||    
T  40182467 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttttgccttgtgttgtactgttctttcttgtattgttctgtc 40182368  T
Q  114 cggtacttactgtt 127  Q
    | |||||| |||||    
T  40182367 cagtacttgctgtt 40182354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 41790556 - 41790668
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | ||||||||||||||||    
T  41790556 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcatgtgttgttctgccttgtgttgtactgttctattttatactgttctgtcc 41790655  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  41790656 agtacttactgtt 41790668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 6284392 - 6284505
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||  ||||||||||||| ||||||| | ||||| |||||||||    
T  6284392 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgtactgccttgtgttgtactgttctatcttatattgttctgtc 6284491  T
Q  114 cggtacttactgtt 127  Q
    | |||||| |||||    
T  6284492 cagtacttgctgtt 6284505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 7725903 - 7726019
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||||| | || || | |||||||||||| ||| |||| || ||||||| ||||      
T  7725903 caaaaatcgtataaaacaaaaaattattcaattccataaaaatttgtcctatactattctaccttgtgttgtgatgtactgtcttgtactgttatgtcta 7726002  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  7726003 gtacttactgttttgca 7726019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 7770373 - 7770489
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||||| || || ||||||||||| |||||||| || |||  || |||||     
T  7770373 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctattctgtcttgtgttgtgttgttctgtcttgtacgattatgtcca 7770472  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  7770473 gtacttgctgttttgca 7770489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 32093083 - 32093183
Alignment:
Q  24 atataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    ||||||||||  ||| | |||||||||||||||||||||  ||||||||| ||||||||||| || |||||||| |  ||||||||||||| ||||||||    
T  32093083 atataaaacataaaaattttcaataccataaaaatttgtgttgtgctgttctgccttgtgttatgttgttctgtctcttactgttctgtccagtacttac 32093182  T
Q  124 t 124  Q
    |    
T  32093183 t 32093183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 4689801 - 4689908
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||  |||||||||||||| |||| |||| |||||| ||||||| |||||||| || ||||||| |||||  ||||| ||    
T  4689801 tataaaacaaaaaattattcaatgtcataaaaatttgtcatgtgttgttctgccttatgttgtgttgttctgtcttgtactgttatgtccattacttgct 4689900  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  4689901 gttttgca 4689908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 29241381 - 29241298
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  29241381 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 29241298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2351683 - 2351565
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | || ||||||| |||||| ||||| ||||||||| ||| ||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  2351683 tcaaaaatcgtacaaaacaaaaaattactcaatgccataaaaaatttatcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 2351584  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  2351583 cagtacttgctgttttgca 2351565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 20119776 - 20119656
Alignment:
Q  15 tcaaaaagcatataaaaca---agaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctg 111  Q
    ||||||| |||||||||||   | | |||||||||| | || |||||||||| ||| ||||| ||||||||||||||||||||| | || ||||||||||    
T  20119776 tcaaaaatcatataaaacaaacaaatattattcaatgctattaaaatttgtcatgtactgttctgccttgtgttgtgctgttctatcttgtactgttctg 20119677  T
Q  112 tccggtacttactgttctgca 132  Q
    |||  ||||||||||| ||||    
T  20119676 tccaatacttactgttttgca 20119656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 35701280 - 35701162
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||| | ||||||||| ||||||||||| | || ||||||||||||| ||||||| | || ||||||||||||    
T  35701280 tcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttattctgccttgtgttgtactgttctatcttgtactgttctgtc 35701181  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35701180 cagtacttgctgttttgca 35701162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 39918509 - 39918399
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||||| |||||| |||||||||||| |||| | ||||||||||| ||||||| | || |||||||||||||    
T  39918509 caaaaatcgtataaaacataaaattactcaatactataaaatatttgtcctgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgtcc 39918410  T
Q  115 ggtacttactg 125  Q
     ||||||||||    
T  39918409 agtacttactg 39918399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 24181727 - 24181800
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  24181727 tataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 24181800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 3735359 - 3735263
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||||| ||||||| |||| | || |||||||||||    
T  3735359 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctattctttcttgtactgttctgt 3735263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 4818243 - 4818351
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||  ||||||| | || ||||||||||||| |||||| |    
T  4818243 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgcactgttctatcttgtactgttctgtccagtacttgc 4818342  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  4818343 tgttttgca 4818351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 5673146 - 5673034
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | |||||||| ||||||||| || |||| ||||||||||||||||||| | | || ||||||||||||     
T  5673146 caaaaatcgtataaaacaaaaaattactcattgccataaaatatttgtcctttgatgttatgccttgtgttgtgctgttatatcttgtactgttctgtca 5673047  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  5673046 agtacttactgtt 5673034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 34794880 - 34794772
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| ||| ||||| ||| || |||| |||| ||||||||||||| ||||||| | || |||||||||||||  |||||||    
T  34794880 tataaaacaaaaaattattcaatgccacaaaaaatttatcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttac 34794781  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  34794780 tgttttgca 34794772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 7523135 - 7523056
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||  ||||| ||||| ||||    
T  7523135 aaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttcctgttttgca 7523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 8136832 - 8136729
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| | |||| ||||| |||||||||  |||||||||| |||| ||||||||||||| ||||||| | || |||| |||||||| ||||||||    
T  8136832 tataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttatgccttgtgttgtactgttctatcttgtactattctgtccagtacttac 8136733  T
Q  124 tgtt 127  Q
    ||||    
T  8136732 tgtt 8136729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 35955000 - 35954917
Alignment:
Q  31 acaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||| ||||||||||||||||||||||||| |||  | || |||||||||||| ||||||||||||| ||  ||||||||||||    
T  35955000 acaaaaaattattcaataccataaaaatttatccaatactattttgccttgtgatgtgctgttctgtcttgcactgttctgtcc 35954917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 5571736 - 5571806
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgtt 85  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||||||||    
T  5571736 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgtt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 39788194 - 39788112
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| |||||| ||||||||||| |||||||||| ||||||||| ||| || |||||| |||||||||    
T  39788194 caaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcatgtgctgttctgcattatgttgtactgttctgt 39788112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 24036232 - 24036118
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||  |||||||||| |||| |||| || ||| |||||||||||||||| || |||||||| || |     
T  24036232 caaaaatcgtataaaacaaaaaattattcaatgtca--aaaatttgtcatgtgttgttctgtcttatgttgtgctgttctgtcttgtactgttcagtaca 24036135  T
Q  116 gtacttactgttctgca 132  Q
    ||||||| |||| ||||    
T  24036134 gtacttattgttttgca 24036118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 22493512 - 22493611
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| ||||| |||||||||| | |||||||||||| | |||||| ||  ||||||||||||    
T  22493512 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgttctgtgctgttctaccttgtgttgtgttattctgtcttgcactgttctgtcc 22493611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 41459592 - 41459509
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| |||| ||| ||| ||||||||||||| | ||||||||||| |||||||||    
T  41459592 tcaaaaatcgtataaaacaaaaaattactcaatgccattaaatttttgtcctgtgctgttctaccttgtgttgtactgttctgt 41459509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 11963344 - 11963226
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| |  |||||| ||||| ||||||||| |||||| |||| | || ||| ||||||||| ||||||| | || ||||||||||||    
T  11963344 tcaaaaatcgtataaaatacaaaattactcaatgccataaaaaatttgtcatgtgttattctgctttgtgttgtactgttctatcttgtactgttctgtc 11963245  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  11963244 cagtacttgctgttttgca 11963226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31644447 - 31644369
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||| |||||||||||  ||||||||||||  |||||||||||||| |||| |||| | |||||| ||||||| ||||    
T  31644447 aaaaatcatataaaacataaaattattcaatgtcataaaaatttgtcttgtgttgttctaccttgtattgtgctattct 31644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 31880179 - 31880252
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||| ||||||||||||  ||||||| ||||||| ||| ||||| ||||||||||||| |||||||||    
T  31880179 tataatacaaaaaattattcaatgtcataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctgt 31880252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 700697 - 700767
Alignment:
Q  18 aaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||| |||||||||||| |||||| ||| | ||||||||| |||||| ||||||||| | |||||||||||    
T  700697 aaaatcatataaaacaaaaaattactcattgccataaaaattttgtcatgtgctgttctaccttgtgttgt 700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 14011549 - 14011587
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtc 63  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  14011549 tataaaacaagaaattgttcaataacataaaaatttgtc 14011587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 22432435 - 22432481
Alignment:
Q  51 ataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||||||||| |||| |||| | |||||||||||||||||||||    
T  22432435 ataaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctgt 22432481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 28090613 - 28090724
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||||  |||||| ||||||||||| ||||| |||| || ||||| ||||||| | ||||  |||||||||    
T  28090613 tcaaaaatcgtataaaacaaaaaattactcaataatataaaaaatttgtcctgtactgttctgccgtgagttgtactgttctatcttat--tgttctgtc 28090710  T
Q  114 cggtacttactgtt 127  Q
    |  |||||| ||||    
T  28090711 caatacttaatgtt 28090724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 21739264 - 21739367
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| ||||||  |||| |||||||| ||||||||||| ||||     |||||||||| ||||||| | ||||| |||| ||||| |||||| |    
T  21739264 tataaaacaaaaaattacacaatgccataaaaaatttgtcctgttctgt-----cttgtgttgtactgttctatcttatattgttatgtccagtacttgc 21739358  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  21739359 tgttttgca 21739367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 329476 - 329360
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| ||| |||||||||||||     
T  329476 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtactgttatgccttgtgttgtgctgttctgcattgtactgttctgtcca 329377  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  329376 gtacttactgttttgca 329360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 48445527 - 48445417
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| |||| || ||| ||||||| |||||     
T  48445527 caaaaatcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttatgcattgtactgttttgtcca 48445428  T
Q  116 gtacttactgt 126  Q
    |||||||||||    
T  48445427 gtacttactgt 48445417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18470691 - 18470573
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  18470691 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 18470592  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18470591 cagtacttgctgttttgca 18470573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 36769657 - 36769775
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  36769657 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 36769756  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  36769757 cagtacttactgttttgca 36769775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 132
Target Start/End: Original strand, 3892126 - 3892232
Alignment:
Q  27 taaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactg 125  Q
    |||||||| |||||| ||||| |||||||| ||||||| | ||||||| ||||||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  3892126 taaaacaaaaaattactcaatgccataaaaaatttgtcatatgctgttctgccttgtgttgtactgttctatcttatactgttctgtccagtacttactg 3892225  T
Q  126 ttctgca 132  Q
    || ||||    
T  3892226 ttttgca 3892232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 10932645 - 10932763
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| |||| |||||||| ||||||| | || ||||||||||||    
T  10932645 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccgtgtgttgtactgttctatcttgtactgttctgtc 10932744  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  10932745 cagtacttactgttttgca 10932763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 11321973 - 11322091
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||||| | || ||||||||||||    
T  11321973 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttgtactgttctgtc 11322072  T
Q  114 cggtacttactgttctgca 132  Q
    || ||||||||||| ||||    
T  11322073 cgatacttactgttttgca 11322091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 47947767 - 47947649
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  47947767 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 47947668  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  47947667 cagtacttgctgttttgca 47947649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 47953197 - 47953079
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  47953197 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 47953098  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  47953097 cagtacttgctgttttgca 47953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 26994323 - 26994431
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || | ||||||||||| |||||| |    
T  26994323 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtcctgttctgtccagtactttc 26994422  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  26994423 tgttttgca 26994431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 3922791 - 3922909
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||| || ||||| |||||||| ||||||||||||||||| ||||||||||||| ||| ||| | || ||||||||||||    
T  3922791 tcaaaaatcgtataaaacaaaaaaatactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactggtctatcttgtactgttctgtc 3922890  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  3922891 cagtacttgctgttttgca 3922909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32873857 - 32873975
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  32873857 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 32873956  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32873957 cagtacttgctgttttgca 32873975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 34295493 - 34295609
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||| |||||| | || ||||||| ||| |     
T  34295493 caaaaatcatataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttttgtact 34295592  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  34295593 gtacttgctgttttgca 34295609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 11250629 - 11250558
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgtt 85  Q
    ||||||| |||||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  11250629 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgtt 11250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 11822212 - 11822121
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||| ||||||||||||||||| || |||| |||||||||||||| |||||| | |||||||||| ||| | |||||||||||| ||||    
T  11822212 attcaatgccataaaaatttgtcctatgttgttctgccttgtgttgtgttgttctattttatactgttatgttcagtacttactgttttgca 11822121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 30599106 - 30599209
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| |||||  ||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||| ||||||||    
T  30599106 tataaaacaacaaattactcaatttcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttac 30599205  T
Q  124 tgtt 127  Q
    ||||    
T  30599206 tgtt 30599209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 43368198 - 43368091
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||   ||||||||||||| ||||||||| | |||||| |||||||||||| | || ||||||||||| | |||||| ||    
T  43368198 tataaaacaaaaaattattcaatgtgataaaaatttgtcatgtgctgttctcccttgtattgtgctgttctttcttgtactgttctgtactgtacttgct 43368099  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  43368098 gttttgca 43368091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 43214013 - 43214091
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||| | |||||||||| |||| |||||||  |||||||||||||||||||||||| | |||||||||||||||||    
T  43214013 tcaaaaatcctataaaacaaaaaatgattcaatgtcataaaaatttgtcctgtgctgttctaccttgtgttgtgctgtt 43214091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 12982300 - 12982203
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||| ||||||| | || ||||||||| ||| ||||||    
T  12982300 tataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctctccagtactt 12982203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 21784877 - 21784760
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| |||||| ||||| |||| ||||||||||||| ||||||| | || ||||||| |||||    
T  21784877 caaaaatcgtataaaacataaaattactcaatgccataaaagatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtcc 21784778  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  21784777 agtacttactgttttgca 21784760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26652872 - 26652767
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| ||||||| | |||||| |||||||||| | | |||||||||| ||| |     
T  26652872 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatgctgttctcccttgtattgtgctgttttttcttatactgttatgtact 26652773  T
Q  116 gtactt 121  Q
    ||||||    
T  26652772 gtactt 26652767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 30849335 - 30849452
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||||  |||||||||| |||| || |||||||||| ||||||| | || ||||||||||||     
T  30849335 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgttgttctgtcttgtgttgtactgttctatcttgtactgttctgtca 30849434  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  30849435 agtacttactgttttgca 30849452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 48894723 - 48894626
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||| |||||||||| ||||||||||| |||||| || || ||||||| ||||    
T  48894723 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtccagtgctgttttaccttgtgttgtactgttcggtcttgtactgttatgtc 48894626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22724121 - 22724229
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  ||||||||||||||||||||||||| || |||| |||| |||||| ||||||| ||| || | ||||||| || ||||||    
T  22724121 caaaaatcatataatacagaaaattattcaataccataaaaatttatcttgtgttgttctgccttatgttgtgttgtcctatcttatactattttgtccg 22724220  T
Q  116 gtacttact 124  Q
    ||| |||||    
T  22724221 gtatttact 22724229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 22724620 - 22724728
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  |||||||||||||||| |||||||| || |||| |||| |||||| ||||||| | |||| | || |||||||||||||     
T  22724620 caaaaatcatataatacagaaaattattcaataccagaaaaatttatcttgtgttgttctgccttatgttgtgatattctatcttgtactgttctgtcca 22724719  T
Q  116 gtacttact 124  Q
    |||||||||    
T  22724720 gtacttact 22724728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 41665672 - 41665775
Alignment:
Q  24 atataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    ||||||||||  |||||||||||||||||||||||||||| |||||| || ||| || ||||||||||| || | || || |||| ||| | ||||||||    
T  41665672 atataaaacagaaaattattcaataccataaaaatttgtcttgtgctattatgcgttatgttgtgctgtcctatcttgtattgttatgttccgtacttac 41665771  T
Q  124 tgtt 127  Q
    ||||    
T  41665772 tgtt 41665775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 26371897 - 26372010
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||| ||||||||||| |||| |||| ||  || |||||| ||||||| | || ||||||| ||||    
T  26371897 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgatgttctgttttatgttgtactgttctatcttgtactgttatgtc 26371996  T
Q  114 cggtacttactgtt 127  Q
    | ||||||||||||    
T  26371997 cagtacttactgtt 26372010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 43189332 - 43189449
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | ||| |||||| |||||| ||||| |||||||| ||||||| ||  || || ||||||||||||| ||||||| | |||||||||| |||||    
T  43189332 caaaaatcgtatgaaacaacaaattactcaatgccataaaaaatttgtcatgcactattctgccttgtgttgtactgttctatcttatactgttatgtcc 43189431  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  43189432 agtacttactgttttgca 43189449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 1363634 - 1363538
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||||||||| ||||||||||||||| |||| |||| | |||| || |||| |||||| | ||||| |||| ||||| ||||||    
T  1363634 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgttctaccttctgatgtgttgttctatcttatattgttatgtccagtactt 1363538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 9913531 - 9913435
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| | |||||| ||||| |||||| | || |||||||||||    
T  9913531 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgt 9913435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 9927219 - 9927123
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| | |||||| ||||| |||||| | || |||||||||||    
T  9927219 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcatgtggtgttctcccttgtattgtgttgttctttcttgtactgttctgt 9927123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 41211299 - 41211407
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||||| || |||| |||||||||||||  |||||| | || ||||||| ||||| |||||| |    
T  41211299 tataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtattgttctatcttgtactgttttgtccagtacttgc 41211398  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  41211399 tgttttgca 41211407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 37966971 - 37966872
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||| ||||||||||||||||||  ||| || || ||| ||||||||||||||| ||| ||||| | || ||||  |||||||||    
T  37966971 tataaaacaaaaaattatttaataccataaaaatttgttatgtactattctgctttgtgttgtgctgttatgtcttatattattatgtctagtacttact 37966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 40753162 - 40753079
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||| ||||||||| |||||||||    
T  40753162 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgctttgtgttgtactgttctgt 40753079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 43158774 - 43158892
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||| ||||| || |||||||||| ||||||| | || ||||| ||| ||    
T  43158774 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgttctgtcttgtgttgtactgttctatcttgtactgctctatc 43158873  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  43158874 tagtacttgctgttttgca 43158892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 46633704 - 46633586
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || |||| || ||||    
T  46633704 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtactattatgtc 46633605  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  46633604 caatacttgctgttttgca 46633586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 1870131 - 1870047
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||| |||||  |||||||| ||| || ||||||||| ||||||||||||| ||||||| |||| |||||||    
T  1870131 tataaaacaaaaaattactcaatgtcataaaaaatttatcatgtgctgttctgccttgtgttgtactgttctatattgtactgtt 1870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 94
Target Start/End: Original strand, 29455957 - 29456013
Alignment:
Q  38 attattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttc 94  Q
    ||||||||||||||||||| |||||| |||| ||||||||||| ||||||| |||||    
T  29455957 attattcaataccataaaagtttgtcatgtgttgttttgccttatgttgtgttgttc 29456013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 87
Target Start/End: Original strand, 15035354 - 15035413
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||| |||||||||||||||||||||||||||| |||| |||| ||  |||||||||    
T  15035354 aaaacaaaaaattattcaataccataaaaatttgtcatgtgttgttctgttttgtgttgt 15035413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 16028013 - 16028084
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtg 88  Q
    |||||| ||||||| |||| ||||| || |||||||||||||| |||||| || |||| ||||||||||||||    
T  16028013 caaaaatcatataagacaa-aaattgttaaataccataaaaatctgtcctatgttgttatgccttgtgttgtg 16028084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 23349392 - 23349488
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||| ||||||||||||   ||||||||||||| ||||||||| | |||| ||||||  |||||| | || ||||||| |||||  ||||||||    
T  23349392 aaaacaaaaaattattcaatgttataaaaatttgtcatgtgctgttctaccttatgttgttttgttctatcttgtactgttatgtccattacttact 23349488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 26910517 - 26910612
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||||||||||||| |||||| || |||||| | ||||||||| || ||| || |  |||| |||| ||||| |||||||||||| ||||    
T  26910517 aaattattcaataccataaaa-tttgtcttgcgctgttctaccttgtgttatgatgtcctatcctatattgttatgtccagtacttactgttttgca 26910612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 46448742 - 46448810
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||||||| |||||||||||| | ||||||| ||||||  || ||||||||||||| |||| |||||    
T  46448742 tataaaacaaaaaattattcaatgcaataaaaaattgtccaatgttgttttgccttgtcttgtactgtt 46448810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 14608501 - 14608560
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||| || |||||||||||| |||||||| || |||| |||||||||||||| ||||||    
T  14608501 aaattgtttaataccataaaagtttgtcctatgttgttatgccttgtgttgtgttgttct 14608560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18386532 - 18386414
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| |||| |||| |||||||||||||  |||||| | || ||| ||| ||||    
T  18386532 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgttgttctgccttgtgttgtattgttctattttgtaccgttttgtc 18386433  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||| ||||| ||||    
T  18386432 caatacttgctgttttgca 18386414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 29661329 - 29661247
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| |||||| ||||| | ||||||| |||||| |||| |||| ||||||||||||| || ||||||    
T  29661329 caaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgttgttctgccttgtgttgtactattctgt 29661247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 34117458 - 34117392
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgt 82  Q
    |||||| | |||||||| | |||||||||||| ||||||||||||||| |||| |||| || |||||    
T  34117458 caaaaatcgtataaaacgaaaaattattcaatgccataaaaatttgtcttgtgttgttctgtcttgt 34117392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 20127254 - 20127177
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||| ||||||||| |  ||||||||||| |||| ||| || ||||||||| ||  |||||||||||| ||||    
T  20127254 aaaaatttgtcatgtgctgttctatcttgtgttgtgttgttttgtcttgtactgttctatc--gtacttactgttttgca 20127177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 13781 - 13897
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| || || ||||||| |||||||||||||||||     
T  13781 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgcaattatgccttgtattttgttgttctgcattatactgttctgtcca 13880  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  13881 gtacttactgttttgca 13897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 6e-37; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 29611158 - 29611256
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| || |||||||||||||||||    
T  29611158 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgttgttatgccttgtgttgtgttgttatgcattatactgttctgtcc 29611256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 15001469 - 15001352
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||  |||||||||||||||||||||| ||| || |||| |||| ||||||||||||||||||||||| || |||||||||||||    
T  15001469 caaaaatcatataaaacagaaaattattcaataccataaaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgtcttgtactgttctgtcc 15001370  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  15001369 agtacttactgttttgca 15001352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 35225664 - 35225548
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||| || ||||||||||| ||| |||| || |||| ||||||||     
T  35225664 caaaaatcatataaaacaggaaattattcaataccataaaaatttgtcttgtgttgttctgtcttgtgttgtgttgtcctgtcttgtactattctgtcca 35225565  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  35225564 gtacttactgttttgca 35225548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 8673157 - 8673275
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| | || ||||||| ||||    
T  8673157 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttttgtc 8673256  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  8673257 cagtacttgctgttttgca 8673275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 37618504 - 37618611
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||| ||| || ||||||| ||||| ||||||||     
T  37618504 tataaaacaaaaaattattcaatgccataaacatttgtcatgtgctgttctgccttgtgttgtgctgttatgttttgtactgttatgtccagtacttacc 37618603  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  37618604 gttttgca 37618611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 3251758 - 3251876
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| ||||||| ||||||||||||| ||||||| | ||||| |||||||||    
T  3251758 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgctgttctgccttgtgttgtactgttctatcttatattgttctgtc 3251857  T
Q  114 cggtacttactgttctgca 132  Q
    || ||||||||||| ||||    
T  3251858 cgatacttactgttttgca 3251876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32303687 - 32303805
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||| |||||| ||||||| | || ||||||||||||    
T  32303687 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtactgttctgtc 32303786  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32303787 cagtacttgctgttttgca 32303805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 45446458 - 45446340
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  45446458 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 45446359  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  45446358 cagtacttactgttttgca 45446340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32020103 - 32020221
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  32020103 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 32020202  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  32020203 cagtacttgctgttttgca 32020221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 41709780 - 41709662
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||  ||||||||||||||| ||||||||||||| ||||||| | || || |||||||||    
T  41709780 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaaattgtcctgtgctgttctgccttgtgttgtactgttctatcttgtattgttctgtc 41709681  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  41709680 cagtacttactgttttgca 41709662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 13407038 - 13407150
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| | |||||| ||||||| |||| |||| ||||||||||||| ||||||| |||| |||||||||||||    
T  13407038 caaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatattgtactgttctgtcc 13407137  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  13407138 agtacttactgtt 13407150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 27103962 - 27103855
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||||||||| |||||||||||||  |||||| | || ||||||||||||    
T  27103962 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtaatgttctatcttgtactgttctgtc 27103863  T
Q  114 cggtactt 121  Q
    | ||||||    
T  27103862 cagtactt 27103855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 31732067 - 31731949
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||| |||||| || || |||||||||| ||||||| | ||||||| |||||||    
T  31732067 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcatgtgctattctgtcttgtgttgtactgttctatcttatacttttctgtc 31731968  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  31731967 cagtacttactgttttgca 31731949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 34101511 - 34101401
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||  ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | |||||||||| ||||    
T  34101511 tcaaaaatcgtataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgatgttctgccttgtgttgtactgttctatcttatactgttttgtc 34101412  T
Q  114 cggtacttact 124  Q
    | |||||||||    
T  34101411 cagtacttact 34101401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 6386579 - 6386472
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||  ||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  6386579 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 6386480  T
Q  114 cggtactt 121  Q
    | ||||||    
T  6386479 cagtactt 6386472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 40389042 - 40388935
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||| || |||||||||||| |||||||| ||| ||||||| |||| ||||||||||||||||||| ||| || |||| || |||||     
T  40389042 caaaaatcgtataaaataaaaaattattcaatgccataaaattttttcctgtgttgttctgccttgtgttgtgctgttatgtcttgtactcttatgtcca 40388943  T
Q  116 gtacttac 123  Q
    ||||||||    
T  40388942 gtacttac 40388935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 31513685 - 31513803
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  31513685 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 31513784  T
Q  114 cggtacttactgttctgca 132  Q
    |  ||||||||||| ||||    
T  31513785 caatacttactgttttgca 31513803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 5968966 - 5969066
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||| || |||| ||||||||||||| ||||||| | || ||||||||||||    
T  5968966 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctatgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 5969065  T
Q  114 c 114  Q
    |    
T  5969066 c 5969066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 22999259 - 22999167
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||| |||||||||| | |||||| |||||||||||| | || |||||||    
T  22999259 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgttctgtgctgttctcccttgtattgtgctgttctttcttgtactgtt 22999167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 45114057 - 45113941
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  ||||||||||||  |||| |||||| || |||| |||| ||||||||||||||||| ||| | || ||||||| |||||     
T  45114057 caaaaatcgtataaaacataaaattattcaatgtcatacaaatttatcatgtgttgttatgccttgtgttgtgctgctctatcttgtactgttatgtcca 45113958  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  45113957 gtacttactgttttgca 45113941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 6460245 - 6460154
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||||||||||||||||||||||||||  | |||| |||| ||||||||| |||  | ||||||| ||||  ||||||||||||    
T  6460245 aaattattcaataccataaaaatttgtcctgtgctactctgccctgtgctgtgctgttttgtcctgtactgttttgtcaagtacttactgtt 6460154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 7591550 - 7591629
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| | |||||| |||| |||||||    
T  7591550 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctcccttgtattgtactgttct 7591629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 34063131 - 34063024
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| |||| |||  |||||| |||||| ||||||| | || ||||||||||||    
T  34063131 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgtgctgccttatgttgtactgttctatcttgtactgttctgtc 34063032  T
Q  114 cggtactt 121  Q
    | ||||||    
T  34063031 cagtactt 34063024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 37664385 - 37664468
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||| ||||||||| |||||||||    
T  37664385 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgcattgtgttgtactgttctgt 37664468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 29672425 - 29672538
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||| |||||||||||||||| |||| || |||||||||  ||||||| | || || |||||||||    
T  29672425 tcaaaaatcgtataaaacaaaaaattactcaatgccatgaaaaatttgtcctgtgttgttctgtcttgtgttgcactgttctatcttgtattgttctgtc 29672524  T
Q  114 cggtacttactgtt 127  Q
    | || |||||||||    
T  29672525 cagttcttactgtt 29672538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 30501147 - 30501066
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||| || ||||||| ||| ||||||| ||||||||    
T  30501147 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctatggtgttttgtcttatgttgtgttgttctgt 30501066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 4052483 - 4052402
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | ||||||||||  ||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  4052483 tcaaaaatcgtataaaacaa--aattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 4052402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 10467066 - 10466987
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||| ||  |||||||||||||||||||||||| | |||||| ||||| ||||||    
T  10467066 caaaaatcgtataaaacaaaaaattattctatgtcataaaaatttgtcctgtgctgttctcccttgtattgtgttgttct 10466987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 16595272 - 16595363
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||||||| |||| |||| | | | || || ||||||||||| || |||||||| |||||||||||||||| |||| |||||||    
T  16595272 aaattattcaataccaaaaaagtttgccatttacttttctgccttgtgttttgttgttctgtcttatactgttctgtccagtacatactgtt 16595363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 37474721 - 37474642
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | ||||||| || ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||||||||||    
T  37474721 caaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcatgtgctgttatcccttgtattgtgctgttct 37474642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 41548620 - 41548541
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| ||||| ||||||    
T  41548620 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgttgttct 41548541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 29563328 - 29563426
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | ||||||||||| ||||||| | || |||||||||||    
T  29563328 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctaccttgtgttgtactgttctatcttgtactgttctgt 29563426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 30543125 - 30543207
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| | |||||||||  |||||| ||||| |||||||| |||||||||||| |||| ||||||||||||| |||||||||    
T  30543125 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctgtgttgttctgccttgtgttgtactgttctgt 30543207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 16485912 - 16485976
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgcctt 80  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||||  ||||||||| ||||||    
T  16485912 caaaaatcatataatacagaaaattattcaataccataaaaatttgttttgtgctgttctgcctt 16485976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 17805654 - 17805575
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||| |||| | |||||||||||| | |||||| || ||||||| ||||  |||||||||||| ||||    
T  17805654 aaaaatttgtcctgtgttgttctaccttgtgttgtgttattctgtcttgtactgttttgtcaagtacttactgttttgca 17805575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 37861863 - 37861801
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| |||||||||    
T  37861863 aaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 37861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 25478236 - 25478138
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||| ||||| ||||||||| ||    ||| ||||| |||||||||||||  |||||| | |||||||||| ||||  |||||||||    
T  25478236 tataaaacaaaaaattactcaatgccataaaaaatt----tgtcctgttctgccttgtgttgtattgttctatcttatactgttttgtcaagtacttact 25478141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 4599644 - 4599572
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||||||| |||||||||| || | || |||| || ||||||||||| |||||||| ||||| ||||    
T  4599644 aaattattcaatacaataaaaatttatcatatgttgttctgtcttgtgttgtgttgttctgtcttatattgtt 4599572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 12753428 - 12753527
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||| ||| |||| |||| || ||||||||||  |||||| | || |||||||||||||    
T  12753428 caaaaatcgtataaaacaacaaattactcaatgccataaaatttttgtcatgtgttgttctgtcttgtgttgtattgttctatcttgtactgttctgtcc 12753527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 95
Target Start/End: Original strand, 10656798 - 10656868
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| || ||||||||||||| |||||||||||||| |  | |||| || ||||||||||| ||||||    
T  10656798 tataaaagaaaaaattattcaataacataaaaatttgtcatacgttgttatgtcttgtgttgtgttgttct 10656868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 132
Target Start/End: Complemental strand, 21272676 - 21272598
Alignment:
Q  54 aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| ||||||| ||||||||||||| ||| ||| | || || ||||||||||  ||||| ||||| ||||    
T  21272676 aaaatttgtcctatgctgttctgccttgtgttgtactgatctatcttgtattgttctgtccaatacttgctgttttgca 21272598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 9624219 - 9624182
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  9624219 aaattattcaataccataaaaatttgtcatgtgttgtt 9624182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 14005156 - 14005229
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| |||||  ||||||| ||||||||| || |||| || |||||||||| |||||||||    
T  14005156 tataaaacaaaaaattactcaatgtcataaaaaatttgtcctatgttgttctgtcttgtgttgtactgttctgt 14005229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 17520568 - 17520507
Alignment:
Q  51 ataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| || | |||||||||    
T  17520568 ataaaaatttgtcctgtactgttctgtcttgtgttgtgttattctgtcttcttctgttctgt 17520507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 39642876 - 39642828
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||| ||||||||||||  |||||||||||||| |||| ||||    
T  39642876 tataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgatgtt 39642828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 3649641 - 3649533
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||  |||||     
T  3649641 caaaaaacatataaaacaagaaattattcaataccataaaaatttgtgatgtgctgttatgccttgtgttgtgctgttctgcattatactgtgttgtcca 3649542  T
Q  116 gtacttact 124  Q
    |||||||||    
T  3649541 gtacttact 3649533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 22318465 - 22318581
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| |||| |||| || ||||||||||||||||||| ||| |||| ||||||||     
T  22318465 caaaaatcatataaaacaagaaattattcaatatcataaaaatttgtcatgtgttgttatgtcttgtgttgtgctgttctgcattgtactcttctgtcca 22318564  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  22318565 gtacttactgttttgca 22318581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 26083343 - 26083235
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||| |||||| ||||| ||||     
T  26083343 caaaaagcatataaaacatgaaattattcaataccataaaaatttgtcgtgtactgttatgccttgtgttgtgttgttctgcattatattgttcagtcca 26083244  T
Q  116 gtacttact 124  Q
     ||||||||    
T  26083243 atacttact 26083235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 9807161 - 9807053
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||  |||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||| | || |||||||||||||     
T  9807161 caaaaatcgtataaaacataaaattattcaatgccatacaaatttgtcctgtgctgttatgccttgtgttgtgctgttctatcttgtactgttctgtcca 9807062  T
Q  116 gtacttact 124  Q
    |||||||||    
T  9807061 gtacttact 9807053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 132
Target Start/End: Original strand, 49152177 - 49152297
Alignment:
Q  13 catcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctg 111  Q
    ||||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | |||||||||||||    
T  49152177 catcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttatactgttctg 49152276  T
Q  112 tccggtacttactgttctgca 132  Q
    ||| |||||| ||||| ||||    
T  49152277 tccagtacttgctgttttgca 49152297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 21580032 - 21579914
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||| | |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||| | |||||||||||||||    
T  21580032 tcaaaaatcgtataaaactaaaaattactcaataccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttatactgttctgtc 21579933  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  21579932 cagtacttactgttttgca 21579914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 29785617 - 29785735
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | ||||||||||||||     
T  29785617 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtt 29785716  T
Q  114 cggtacttactgttctgca 132  Q
    | ||||||| |||| ||||    
T  29785717 cagtacttattgttttgca 29785735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 55065413 - 55065530
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||||||||||||||||||| ||||||||||||| || || | | |||||||||| |||||    
T  55065413 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaatttgtcctgtgctgttctgccttgtgttgtactattttatcttatactgttatgtcc 55065512  T
Q  115 ggtacttactgttctgca 132  Q
     |||||| ||||| ||||    
T  55065513 agtacttgctgttttgca 55065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 56154627 - 56154520
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||| |||||| ||| ||||| ||||||||||||| ||||||| | |||||||||||||||    
T  56154627 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactgttctgccttgtgttgtactgttctatcttatactgttctgtc 56154528  T
Q  114 cggtactt 121  Q
    | ||||||    
T  56154527 cagtactt 56154520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 20802611 - 20802729
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||||||| |||||||||||| |||| ||||||||||||| ||||||| | || |||||||||||     
T  20802611 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtt 20802710  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  20802711 cagtacttgctgttttgca 20802729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 24002344 - 24002226
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||| ||||| |||||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  24002344 tcaaaaatcgtataaaacaaaaaattactcaatgccaaaaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 24002245  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  24002244 cagtacttgctgttttgca 24002226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 43641105 - 43640987
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  43641105 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 43641006  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  43641005 tagtacttgctgttttgca 43640987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 14296602 - 14296485
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||| ||||||||| ||||||| |||| | |||||||||||    
T  14296602 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtcc 14296503  T
Q  115 ggtacttactgttctgca 132  Q
     ||||||| |||| ||||    
T  14296502 agtacttattgttttgca 14296485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 2786969 - 2786853
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||| |||||  ||||||||||||||| ||||||| ||||| || || ||||||| |||||     
T  2786969 caaaaatcttataaaacaaaaaattattcaatgcaataaaaaattgtctagtgctgttttgccttatgttgtgttgttcggtcttgtactgttatgtcca 2786870  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  2786869 gtacttactgttttgca 2786853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 14314850 - 14314738
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||| ||||||||| ||||||| |||| | |||||||||||    
T  14314850 caaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgctttgtgttgtactgttctatattgttctgttctgtcc 14314751  T
Q  115 ggtacttactgtt 127  Q
     ||||||| ||||    
T  14314750 agtacttattgtt 14314738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 50729627 - 50729715
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||| |||| ||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||| | |||| ||| |||||    
T  50729627 aaattatttaatatcataaaaatttgttctgtgctgttatgccttgtgttgtgctgttctgcattatactgtgccgtccagtatttact 50729715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 53200724 - 53200815
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactg 106  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||| |||| |||||| ||||||| |||||||| || |||||    
T  53200724 tcaaaaatcatacaaaacaaaaaattattcaataccataaaaatttgttctgtgttgttatgccttatgttgtgatgttctgttttgtactg 53200815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 6776574 - 6776484
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  6776574 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 6776484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 23521886 - 23521768
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||| | | || ||||||||||||    
T  23521886 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttttatcttgtactgttctgtc 23521787  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  23521786 cagtacttgctgttttgca 23521768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 39078666 - 39078596
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttg 86  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  39078666 caaaaatcatataaaataagaaattattcaataccataaaaatttatcctgtgttgttatgccttgtgttg 39078596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 37695622 - 37695727
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| | |||||| ||||| |||||| | || ||||||||||| |     
T  37695622 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgtaca 37695721  T
Q  116 gtactt 121  Q
    ||||||    
T  37695722 gtactt 37695727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 44324423 - 44324500
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  44324423 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttatgttgtgctgtt 44324500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 37865749 - 37865641
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||||||||| |||||||||  ||||| |||| |||| ||||||||||||| ||||||| | || ||||||| ||||| ||||||||    
T  37865749 tataaaacaaaaaattattcaatgccataaaaaaattgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtcccgtacttac 37865650  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  37865649 tgttttgca 37865641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 50178574 - 50178690
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| ||||| |||||| | || ||||||||||| |     
T  50178574 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgatgttctcccttgtattgtgatgttctttcttgtactgttctgtact 50178673  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  50178674 gtacttgctgttttgca 50178690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 52949725 - 52949610
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||||| || | |||||| |||||||||||| | || ||||||||||| |     
T  52949725 caaaaatcgtataaaacaa-aaattattcaatgtcataaaaatttgtcctgtgctattctcccttgtattgtgctgttctttcttgtactgttctgtact 52949627  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  52949626 gtacttgctgttttgca 52949610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 33552922 - 33553005
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  33552922 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttttgccttgtgttgtactgttctgt 33553005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 21202745 - 21202636
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| |||||| ||||||||| ||  ||||||||||||||||||| || ||||||| |||||    
T  21202745 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgttttgtgttgtgctgttctgtcttgtactgttttgtcc 21202646  T
Q  115 ggtacttact 124  Q
     |||||||||    
T  21202645 agtacttact 21202636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 7555038 - 7555130
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| |||| |||| || ||||||||||| |||| ||| || |||||||    
T  7555038 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcgtgtgatgttctgtcttgtgttgtgttgttttgtcttgtactgtt 7555130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 29592900 - 29592824
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgt 92  Q
    |||||| |||||||||||| |||||||||||| ||| ||||||||||| ||| ||||| ||||||||||||| ||||    
T  29592900 caaaaatcatataaaacaaaaaattattcaatgccaaaaaaatttgtcttgttctgttctgccttgtgttgttctgt 29592824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 47642572 - 47642668
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||| |||||||||||| | |||||| ||||| |||||| | || |||||||||||    
T  47642572 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttatcctgtgctgttctcccttgtattgtgttgttctttcttgtactgttctgt 47642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 50186533 - 50186417
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||| || ||||||||||||  |||||||||||||||| || |||| || ||| ||||||||| || ||| ||||||||||| |||      
T  50186533 caaaaatcgtataaaataaaaaattattcaatgtcataaaaatttgtcctatgttgttatgtcttatgttgtgctattttgtcttatactgttcagtcaa 50186434  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  50186433 gtacttactgttttgca 50186417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 7001839 - 7001748
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||||| |||||||||||||||||||  |||| || ||||||||||| |||||||| || |||| || ||||| ||| ||||||||    
T  7001839 aaattattcaatgccataaaaatttgtcctgtattgttctgtcttgtgttgtgatgttctgtcttgtactattttgtccagtatttactgtt 7001748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 30942793 - 30942682
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||| | ||||||||||||| | |||| || | |||||| ||||  ||||||  ||| ||||||| |||||     
T  30942793 caaaaatcatataaaacaagaaattattcaatgctataaaaatttgtcatatgctattataccttgtattgtaatgttcttaattgtactgttttgtcca 30942694  T
Q  116 gtacttactgtt 127  Q
     |||||||||||    
T  30942693 atacttactgtt 30942682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 37931916 - 37931809
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||| | |||||||||||| ||||||||| ||||| ||||||||| |||||||| || || | || ||| || ||||||| ||||| |||||||||    
T  37931916 tataaaacgaaaaattattcaatgccataaaaagttgtcttgtgctgttctgccttgtattatgttattatgtcttgtactgttatgtccagtacttact 37931817  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  37931816 gttttgca 37931809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 33177113 - 33177230
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  |||||| ||||| |||||||| ||||||||| || |||| || |||||||||| ||||||| | |||||||||||||||     
T  33177113 caaaaatcgtataaaacataaaattactcaatgccataaaatatttgtcctttgttgttctgtcttgtgttgtactgttctatcttatactgttctgtca 33177212  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||| ||| ||||    
T  33177213 agtacttaccgttttgca 33177230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 47361499 - 47361572
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| |||||| ||||||| ||||||| ||||||||| ||||||||||||| |||||||||    
T  47361499 tataaaacaaaaaattactcaatatcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 47361572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 52319311 - 52319214
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||| ||||| |||||| ||||| ||||    
T  52319311 aaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttatgtccagtacttgctgttttgca 52319214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 20518112 - 20518196
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| || |||| | || |||||||    
T  20518112 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctatcttgtactgtt 20518196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 132
Target Start/End: Complemental strand, 12600880 - 12600774
Alignment:
Q  27 taaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactg 125  Q
    |||||||| ||| || ||||| ||||||||| ||||||  |||||||| || |||||||||| ||||||| | || ||||||||||||| |||||| |||    
T  12600880 taaaacaaaaaactactcaatgccataaaaaatttgtcaagtgctgttctgacttgtgttgtactgttctatcttgtactgttctgtccagtacttgctg 12600781  T
Q  126 ttctgca 132  Q
    || ||||    
T  12600780 ttttgca 12600774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 24210324 - 24210251
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||| | |||||||||| |||||| |||||||||||||| ||||||| |||| |||| |||||||||||||    
T  24210324 tcaaaaatcgtataaaacaaaaaattactcaataccataaaatatttgtcatgtgttgttctgccttgtgttgt 24210251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 52673813 - 52673756
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||||||||||||||||| |||||| ||||| ||| |||||||||||||| ||||    
T  52673813 aaattattcaataccataaaagtttgtcatgtgcagttctgccttgtgttgtgttgtt 52673756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 53343567 - 53343640
Alignment:
Q  25 tataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||||||||| |||| ||||||||||| |||| |||| ||| ||||||||| |||||||||    
T  53343567 tataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttctgcattgtgttgtactgttctgt 53343640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 11056048 - 11055977
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttg 86  Q
    ||||||| | |||||||||| |||||||||||| ||||||| |||||||| || ||||| | ||||||||||    
T  11056048 tcaaaaatcgtataaaacaaaaaattattcaatgccataaagatttgtcccgtactgttctaccttgtgttg 11055977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 9512420 - 9512538
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| ||||| |||| ||||||||||| |||||| || || ||| |||||  || |||| | || ||||||||||||    
T  9512420 tcaaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctattctgtcttttgttgcactattctatcttgtactgttctgtc 9512519  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  9512520 acgtacttgctgttttgca 9512538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 2725212 - 2725281
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtg 83  Q
    ||||||| | |||||||||| |||||| |||||  ||||||| ||||||||||||||||| |||||||||    
T  2725212 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtg 2725281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 29616166 - 29616093
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| || |||||||||| |||||||||    
T  29616166 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgtcttgtgttgtactgttctgt 29616093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 54542996 - 54542915
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| ||||||||| ||| ||||||||| |||||||    
T  54542996 tcaaaaatcgtataaaacaaaaaattactcaatgacataaaaaatttgtcttgtgctgttctgctttgtgttgtactgttct 54542915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 7381265 - 7381189
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||||||||||||||| |||||||||||||| |||| || ||||| || || |||| ||| || || ||||||||    
T  7381265 aaattattcaataccatacaaatttgtcctgtgatgttctgtcttgtattatgttgttatgtcttgtaatgttctgt 7381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 38486347 - 38486450
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||  ||||||||| |||||||||||||||| ||||||||     |||||||| | ||  |||||||||||  ||||||||    
T  38486347 tataaaacaaaaaattactcaacgccataaaaaatttgtcctgtgctgttctgccttgt-----gctgttctatcttgcactgttctgtctagtacttac 38486441  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  38486442 tgttttgca 38486450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 47669208 - 47669296
Alignment:
Q  39 ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgtt 127  Q
    |||||||||| ||||||| |||||| || ||||||||||||| ||||||  |||||  | || || ||||||||||  |||||||||||    
T  47669208 ttattcaatagcataaaagtttgtcgtgcgctgttttgccttatgttgtattgttccatcttgtattgttctgtccaatacttactgtt 47669296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 985287 - 985217
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||||| ||||||| || | ||||||||||| |||||||||||||||| | || ||||||| ||||||||||    
T  985287 caaaaatcatataagaccaaaaattattcaa-accataaaaatttgtcttatgatgttttgtcttgtgttgt 985217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 10587047 - 10586989
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttg 76  Q
    ||||| |||||||||||| ||||||||| ||||||||||| ||| ||||||||| |||||    
T  10587047 aaaaatcatataaaacaaaaaattattc-ataccataaaagtttatcctgtgctattttg 10586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 36743778 - 36743841
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgt 87  Q
    |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| |||||| ||||||    
T  36743778 tataaaacaacaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgt 36743841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 50727993 - 50728052
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||||| | |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  50727993 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgtt 50728052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 50736007 - 50736066
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||||| | |||||||||| |||||||||||| |||| |||||||||||| ||||||||    
T  50736007 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtccagtgctgtt 50736066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 113
Target Start/End: Complemental strand, 55593891 - 55593792
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||  ||   |||| ||||||||||||| ||||||| | || ||||||||||||    
T  55593891 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttttgcattgttctgccttgtgttgtactgttctatcttgtactgttctgtc 55593792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 10184877 - 10184927
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    ||||||| |||| ||||| ||||||||||||||| |||||| |||||||||    
T  10184877 catataagacaaaaaattgttcaataccataaaagtttgtcatgtgctgtt 10184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 44649245 - 44649348
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||||||  |||||||||||  ||| |||||||||| |||| |||| | |||||| |||| ||||||| | || ||||||||||| |     
T  44649245 caaaaatcgtataaaacaa--aattattcaatgtcatcaaaatttgtcatgtgttgttctcccttgtattgtactgttctttcttgtactgttctgtact 44649342  T
Q  116 gtactt 121  Q
    ||||||    
T  44649343 gtactt 44649348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 62
Target Start/End: Complemental strand, 41711843 - 41711806
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgt 62  Q
    |||||||||| ||||||||||||| |||||||||||||    
T  41711843 tataaaacaaaaaattattcaatagcataaaaatttgt 41711806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 46680592 - 46680649
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgtt 73  Q
    ||||| |||||||||||| |||||| ||||| |||| ||||||||||||||| |||||    
T  46680592 aaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtactgtt 46680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 20694368 - 20694304
Alignment:
Q  24 atataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgt 87  Q
    ||||||||||| |||||| ||| | ||||| |||||||||| |||||| || |||||||||||||    
T  20694368 atataaaacaaaaaattactcattgccatacaaaatttgtcatgtgctattctgccttgtgttgt 20694304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 32181259 - 32181211
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||||||  ||||||||||||  |||| |||||||||||||||||||    
T  32181259 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgtt 32181211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 32858319 - 32858283
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttg 61  Q
    |||||||||| |||||||||||||| |||||||||||    
T  32858319 tataaaacaaaaaattattcaatactataaaaatttg 32858283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 34929920 - 34929848
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgt 87  Q
    |||||| | |||||||||| || ||| | ||| |||||||||||| ||| ||||||||| |||||||||||||    
T  34929920 caaaaatcgtataaaacaaaaatttactgaatgccataaaaattttgtcatgtgctgttctgccttgtgttgt 34929848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Complemental strand, 42772763 - 42772703
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttg 76  Q
    |||||| |||||||||||| |||||| ||||| ||||||| | || |||| ||||||||||    
T  42772763 caaaaatcatataaaacaaaaaattactcaatgccataaataattatcctctgctgttttg 42772703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Original strand, 43189852 - 43189924
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||| ||||||||||||||||||||| ||| || |||| || | | |||||| ||||| ||||||||    
T  43189852 tataagacaaaaaattattcaataccataaaagtttatcatgtgttgctcttccttgtattgtgttgttctgt 43189924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 6896170 - 6896074
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||| |||||||||||||||    
T  6896170 caaaaggcatataaaacaagaaattattcaataccataaaaatttgtcatgtgttgttatgccttgtgttgtgttgttctgcattatactgttctgt 6896074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 30712859 - 30712751
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||  ||||||||| ||||||| ||| |||||||||||||     
T  30712859 caaaaatcatataaaacaaaaaattattcaataccataaaaatttgtcctttgctgttatgcgctgtgttgtgttgttctgcattgtactgttctgtcca 30712760  T
Q  116 gtacttact 124  Q
    |||||||||    
T  30712759 gtacttact 30712751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 9733017 - 9733135
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||| ||||||| | |||||||||||||||    
T  9733017 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttatactgttctgtc 9733116  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  9733117 cagtacttgctgttttgca 9733135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 13829441 - 13829324
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| |||||||||||| ||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||||||  || ||||||| |||||    
T  13829441 tcaaaaatcatataaaacaaaaaattattcaatatcataaaaatttgttctgtgatgttctgccttgtgttgtgctgttctgctttgtactgttttgtcc 13829342  T
Q  115 ggtacttactgttctgca 132  Q
      || |||||||| ||||    
T  13829341 aataattactgttttgca 13829324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 40692308 - 40692190
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| | || ||||||| ||||    
T  40692308 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcttgtactgttatgtc 40692209  T
Q  114 cggtacttactgttctgca 132  Q
      ||| |||||||| ||||    
T  40692208 tagtatttactgttttgca 40692190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 34338813 - 34338706
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| ||||||| | || ||||||||||||    
T  34338813 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaattttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtc 34338714  T
Q  114 cggtactt 121  Q
    | ||||||    
T  34338713 cagtactt 34338706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 5278921 - 5279039
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| |||||||||||||  |||||| | || ||||||||||||    
T  5278921 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtc 5279020  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  5279021 aagtacttactgttttgca 5279039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 18685839 - 18685721
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || |||||||||| ||||||| | || ||||||||||||    
T  18685839 tcaaaaatcctataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctgtc 18685740  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18685739 cagtacttgctgttttgca 18685721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 32497918 - 32497800
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| |||||| |||||| ||||||| | || || |||||||||    
T  32497918 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttttgttgtactgttctatcttgtattgttctgtc 32497819  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  32497818 cagtacttactgttttgca 32497800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 33366613 - 33366495
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||| || |||||||||| ||||||| | || || |||||||||    
T  33366613 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttctatcttgtattgttctgtc 33366514  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  33366513 cagtacttgctgttttgca 33366495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3913548 - 3913664
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| | |||||||||| |||||||||||| |||| || |||| |||||||||||||| |||||||| |||||||||||| ||      
T  3913548 caaaaatcgtataaaacaaaatattattcaatgccataaaaatttatcctatgttgttctgccttgtgttgtgttgttctgtcttatactgttctatcaa 3913647  T
Q  116 gtacttactgttctgca 132  Q
    ||| |||||||| ||||    
T  3913648 gtatttactgttttgca 3913664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 30326418 - 30326525
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||||||| ||||||||||||| ||||||||||||| | ||||| | || ||||||||||||    
T  30326418 tcaaaaatcgtataaaacaaaaaattactcaattccataaaaattttgtcctgtgctgttctgccttgtgttgtacggttctatcttgtactgttctgtc 30326517  T
Q  114 cggtactt 121  Q
    | ||||||    
T  30326518 cagtactt 30326525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17540717 - 17540599
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatt-tgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| | |||| ||||||||| ||||||||||||| ||||||| | |||||||||||| ||    
T  17540717 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatatgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctatc 17540618  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17540617 cagtacttgctgttttgca 17540599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 35114788 - 35114670
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||| | ||||||||| |||||||||||| ||| ||||||||||||| ||||||| | || ||||||||||||    
T  35114788 tcaaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgccgttctgccttgtgttgtactgttctatcttgtactgttctgtc 35114689  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  35114688 cagtacttgctgttttgca 35114670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 33889246 - 33889163
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| |||||||||||| |||||| ||||||||||| |||||||||  ||||||||| ||||||||||||| |||||||||    
T  33889246 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgttatgtgctgttctgccttgtgttgtactgttctgt 33889163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 37003955 - 37004074
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcct-gtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | ||||||| || |||||||||||| ||||||||| |||||||| |||||||||| |||||| |||| ||||||| | ||||||||||||||    
T  37003955 tcaaaaatcgtataaaataaaaaattattcaatgccataaaaaatttgtccttgtgctgttttaccttgtattgtactgttctatcttatactgttctgt 37004054  T
Q  113 ccggtacttactgttctgca 132  Q
    |  |||||| ||||| ||||    
T  37004055 ctagtacttgctgttttgca 37004074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2086075 - 2085957
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  2086075 tcaaaaatcgtataaaacaaaaaattactcaatggcataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 2085976  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  2085975 cagtacttgctgttttgca 2085957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 4641519 - 4641401
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||   ||||||| ||||||||||| |||| |||||| |||||| ||||||| |||| ||||||||||||    
T  4641519 tcaaaaatcgtataaaacaaaaaattactcaatggtataaaaaatttgtcctgtgttgttctgccttatgttgtactgttctatattttactgttctgtc 4641420  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  4641419 cagtacttgctgttttgca 4641401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 19513776 - 19513894
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| |||||||||||| |||||| |||||||||| |||||||||||| |||||||| || ||| | |||| ||||||| | || ||||||| | ||    
T  19513776 tcaaaaatcatataaaacaaaaaattactcaataccataaaaaatttgtcccgtgctgttctgtcttctattgtactgttctatcttgtactgttttatc 19513875  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  19513876 cagtacttactgttttgca 19513894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 39461317 - 39461199
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| ||||||||| |||||| ||||||||| ||||||||||||| ||||||| | || || |||| ||||    
T  39461317 tcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtattgttatgtc 39461218  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||||||||| ||||    
T  39461217 cagtacttactgttttgca 39461199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 26981816 - 26981885
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    |||||||| |||||||||||| ||||||||||||||||||| ||| || ||||||||||||| |||||||    
T  26981816 aaaaatttatcctgtgctgttctgccttgtgttgtgctgttttgtcttgtactgttctgtccagtactta 26981885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 2645173 - 2645269
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttct 110  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||| |||||||| |||||| |||||| ||||||| | ||||||||||||    
T  2645173 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttctgccttatgttgtactgttctatcttatactgttct 2645269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 16104277 - 16104170
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||| |||||| |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  16104277 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccctgtgttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 16104178  T
Q  114 cggtactt 121  Q
    | ||||||    
T  16104177 cagtactt 16104170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 28824654 - 28824761
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| || |||||| ||  |||||||||||||| |||  |||| || ||| |||||||||||||||| || |||||||| |||| |||||||||    
T  28824654 tataaaacaaaaatttattccatgtcataaaaatttgtcatgtattgttctgtcttatgttgtgctgttctgtcttgtactgttcagtccagtacttact 28824753  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  28824754 gttttgca 28824761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 1247157 - 1247060
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    |||||| | ||||||| || |||||||||||| ||||||||||||||| ||| ||||  ||| |||||||||| |||||||| || ||||||| ||||    
T  1247157 caaaaatcgtataaaataaaaaattattcaatgccataaaaatttgtcttgtactgtactgctttgtgttgtgttgttctgtcttgtactgttatgtc 1247060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 121
Target Start/End: Complemental strand, 7258889 - 7258792
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||||||| |||||| ||||| ||||||||| |||||| ||| || || ||||||||||||| ||||||| | || ||||||||||||| ||||||    
T  7258889 tataaaacaaaaaattactcaatgccataaaaaatttgtcatgtactattctgccttgtgttgtactgttctatcttgtactgttctgtccagtactt 7258792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 30798576 - 30798692
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| | ||||||||| |||||||||| ||||||||| || ||| ||||   ||||||| | |||||||||||||||    
T  30798576 tcaaaaatcgtataaaacaaaaaattactaaataccatacaaaatttgtcatgtgctgttctgtcttatgtta--ctgttctatcttatactgttctgtc 30798673  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  30798674 cagtacttgctgttttgca 30798692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 32766593 - 32766672
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| |||||||||||| |||||||||||||||||||| |||| | |||||  ||||| ||||||    
T  32766593 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcctgtgttgttctcccttgcattgtgttgttct 32766672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 18793358 - 18793456
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    |||||||||| |||||| ||||| |||||||| ||||||| |||| |||| | |||| |||||| ||||||| | |||||||||| ||||| |||||||    
T  18793358 tataaaacaaaaaattactcaatcccataaaaaatttgtcttgtgatgttctaccttatgttgtactgttctattttatactgttttgtccagtactta 18793456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 37308638 - 37308552
Alignment:
Q  36 aaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactt 121  Q
    |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||||||||||||| ||||||    
T  37308638 aaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtactt 37308552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 36 - 124
Target Start/End: Original strand, 38993179 - 38993264
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||||||||||||   |||||| |||| |||| |||||| ||||||||||| || | ||||| |||||||||| |||||||||    
T  38993179 aaattattcaataccataa---tttgtcttgtgttgttctgccttatgttgtgctgtcctatcttatattgttctgtccagtacttact 38993264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 16177971 - 16178085
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | ||||||||||  ||||||||||| | ||||||||||||| |||| |||| |  ||||||||||| || | ||| ||  ||||||||||||     
T  16177971 caaaaatcgtataaaacaa--aattattcaatgctataaaaatttgtcgtgtgttgttctatcttgtgttgtgttgatatgtcttgcactgttctgtcca 16178068  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  16178069 gtacttactgttttgca 16178085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 27462900 - 27462969
Alignment:
Q  28 aaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| ||||||||||||  |||| ||||||||| |||| |||| | |||||||||||||||||||||    
T  27462900 aaaacaaaaaattattcaatgtcatataaatttgtcatgtgttgttctaccttgtgttgtgctgttctgt 27462969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 26418916 - 26418808
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||| | |||||||| ||| ||| |||| |||| ||||||| ||||||||||||||| ||  |||||||||||   |||||||    
T  26418916 tataaaacaaaaaattactcattgccataaaatttttgtcatgtgttgttctgccttgcgttgtgctgttctgtcttgcactgttctgtcaaatacttac 26418817  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  26418816 tgttttgca 26418808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 42365578 - 42365462
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccat-aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||| |||||||||||| |||||| ||||| |||| |||||||| || |||| |||| ||||||||||||| ||||||| | ||||  |||| | |||     
T  42365578 aaaaatcatataaaacaaaaaattactcaatgccataaaaaatttatcttgtgttgttctgccttgtgttgtactgttctatcttatgttgttttttcca 42365479  T
Q  116 gtacttactgttctgca 132  Q
     ||||||||||| ||||    
T  42365478 atacttactgttttgca 42365462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 42706362 - 42706243
Alignment:
Q  15 tcaaaaagcatataaaacaagaaa-ttattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    ||||||| | |||||||||| ||| ||| ||||| ||||||||| |||||||||||||||| || ||||||||||  |||||| | || ||||||| |||    
T  42706362 tcaaaaatcgtataaaacaaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttgtgttgtattgttctatcttgtactgttatgt 42706263  T
Q  113 ccggtacttactgttctgca 132  Q
    |  || ||||||||| ||||    
T  42706262 caagtgcttactgttttgca 42706243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 44284632 - 44284561
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgtt 85  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| ||||||||| |||||||||||    
T  44284632 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgtt 44284561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 16062188 - 16062261
Alignment:
Q  40 tattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||||||||||||||||||| ||||| |||| || ||| ||||||| |||| ||| || ||||||| ||||    
T  16062188 tattcaataccataaaaatttgttctgtgttgttctgtcttatgttgtgttgttatgtcttgtactgttttgtc 16062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 40832584 - 40832656
Alignment:
Q  41 attcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||||  ||||||||||||| |||| |||| | ||||||||||||||||||| | || |||| |||||||    
T  40832584 attcaataatataaaaatttgtcatgtgttgttctaccttgtgttgtgctgttctatcttgtactattctgtc 40832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 10399967 - 10400013
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctg 71  Q
    |||||||||| |||||||||||| |||||||||||| || |||||||    
T  10399967 tataaaacaaaaaattattcaatgccataaaaatttatcatgtgctg 10400013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 11114865 - 11114793
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||| | |||||||||||| |||||||||||| || | |  |||| || ||||||||||| ||||||||    
T  11114865 tataaaacgaaaaattattcaatgccataaaaatttttcttatattgttctgtcttgtgttgtgttgttctgt 11114793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 97
Target Start/End: Original strand, 12939388 - 12939471
Alignment:
Q  16 caaaaagcatataaaacaagaaat--tattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||| |||||||||||| |||   ||||||||   || ||||||| || |||| |||| |||||||||||||||||||||||    
T  12939388 caaaaatcatataaaacaaaaaacaatattcaatgttattaaaatttatcttgtgttgttctgccttgtgttgtgctgttctgt 12939471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 38623395 - 38623431
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatt 59  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  38623395 catataaaacaaaaaattattcaatatcataaaaatt 38623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 41934583 - 41934467
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  |||| |||||||||| |||||||||||  || | | ||||  ||||||||||| |||||| | || ||||||  | | ||    
T  41934583 caaaaatcatataagacataaaatcattcaataccgtaaaaatttgttatgcgttattttatcttgtgttgtgttgttctatcttgtactgtgttatacg 41934484  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  41934483 gtacttactgttttgca 41934467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 5534 - 5650
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||||||||||||| |||||||||||||| |||||||| || ||||||| |||||     
T  5534 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgctgttctgccttgtgttgtgttgttctgtcttgtactgttatgtcca 5633  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  5634 gtacttgctgttttgca 5650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 51925290 - 51925406
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||| || ||||||| | |||     
T  51925290 caaaaatcgtataaaacaaaaaattattcaatgccataaaaatttgtcatgtgctgttctgccttgtgttgtgctgttatgtcttgtactgttatatcca 51925389  T
Q  116 gtacttactgttctgca 132  Q
    |||||||| ||| ||||    
T  51925390 gtacttaccgttttgca 51925406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 132
Target Start/End: Original strand, 51259863 - 51259979
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    ||||| |||||||||||| |||||| ||||| |||||||||||| ||| ||||||||| ||||||||||||| ||||||| | || ||||||||| |||     
T  51259863 aaaaatcatataaaacaaaaaattactcaatgccataaaaattttgtcttgtgctgttctgccttgtgttgtactgttctatcttgtactgttctatcca 51259962  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  51259963 gtacttactgttttgca 51259979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 28675794 - 28675676
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  28675794 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtc 28675695  T
Q  114 cggtacttactgttctgca 132  Q
    | ||||||| |||| ||||    
T  28675694 cagtacttattgttttgca 28675676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 22484845 - 22484941
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||||||||||||||| ||||||||| | |||| ||||||| ||| || | |||||||||| ||||| |||||||||||| ||||    
T  22484845 aaattattcaataccataaaaatttgtcttgtgctgttctaccttatgttgtgttgtcctatcttatactgttatgtccagtacttactgttttgca 22484941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34026671 - 34026588
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  34026671 tcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 34026588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 50386547 - 50386654
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||||| | |||||| |||||||||||| | || ||||||||||| | |||||| ||    
T  50386547 tataaaacaaaaaattattcaatgtgataaaaatttgtcctgtgctgttctcccttgtattgtgctgttcttttttgtactgttctgtactgtacttgct 50386646  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  50386647 gttttgca 50386654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 4851537 - 4851655
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| |||||||||||  |||| ||||||||||||| ||||||| | || ||||||| ||||    
T  4851537 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtcttgttctgccttgtgttgtactgttctatcttgtactgttttgtc 4851636  T
Q  114 cggtacttactgttctgca 132  Q
    |||||||| ||||| ||||    
T  4851637 cggtacttgctgttttgca 4851655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 26282468 - 26282586
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| |||||||| ||||||| ||||||||| || |||||||||| ||||||| | || ||||||||| ||    
T  26282468 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgctgttctgtcttgtgttgtactgttctatcttgtactgttctatc 26282567  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  26282568 cagtacttgctgttttgca 26282586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3864756 - 3864873
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||| || ||||||  |||||| | || ||||||||||| |    
T  3864756 caaaaatcatataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttatgcgttatgttgtaatgttctatcttgtactgttctgtgc 3864855  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  3864856 agtacttactgttttgca 3864873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 31883104 - 31883209
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||||| |||| | |||||| |||||||||||| | || ||||||||||| |     
T  31883104 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgtgttgttctcccttgtattgtgctgttctttcttgtactgttctgtact 31883203  T
Q  116 gtactt 121  Q
    ||||||    
T  31883204 gtactt 31883209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 3867731 - 3867842
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||| |||| |||| |||||||||     | |||||| ||| ||||||| ||| |     
T  3867731 caaaaatcatataaaacaagaaattattcaataccataaaaacttgtcatgtgttgttatgccttgtg-----ccgttctgcattgtactgttatgttca 3867825  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  3867826 gtacttactgttttgca 3867842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 25860503 - 25860620
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | |||||||| |||||||||||| |||| |||||| |||||||||||||| | || |||||||||||||    
T  25860503 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcctgtgttgttatgccttttgttgtgctgttctatcttgtactgttctgtcc 25860602  T
Q  115 ggtacttactgttctgca 132  Q
     || ||||| ||| ||||    
T  25860603 agtgcttaccgttttgca 25860620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 12349252 - 12349352
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||| | || ||||||| ||||    
T  12349252 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttgtactgttatgtc 12349351  T
Q  114 c 114  Q
    |    
T  12349352 c 12349352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 5442295 - 5442188
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||||||||| ||||||||| |||||| |||| |||| | |||||| |||| |||||||  ||| ||||||||||||    
T  5442295 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcatgtgttgttataccttgtattgtactgttctaaattgtactgttctgtc 5442196  T
Q  114 cggtactt 121  Q
    | ||||||    
T  5442195 cagtactt 5442188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 25927408 - 25927515
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||| | ||||| |||||||| ||||||| ||||||||| | |||||| |||| ||||||| | |||||||||| ||||    
T  25927408 tcaaaaatcgtataaaacaaaaaatcactcaatgccataaaaaatttgtcttgtgctgttctaccttgtattgtactgttctatcttatactgttttgtc 25927507  T
Q  114 cggtactt 121  Q
    ||||||||    
T  25927508 cggtactt 25927515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 21221451 - 21221553
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| |||||| |||||| ||||||| | || ||||||||||||  |||||| |    
T  21221451 tataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgctgttctgccttatgttgtactgttctatcttgtactgttctgtctagtacttgc 21221550  T
Q  124 tgt 126  Q
    |||    
T  21221551 tgt 21221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 53557876 - 53557994
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||| |   || || |||||||||    
T  53557876 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttataccttgtattgttctgtc 53557975  T
Q  114 cggtacttactgttctgca 132  Q
      |||||||||||| ||||    
T  53557976 aagtacttactgttttgca 53557994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 3964292 - 3964175
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| |||||||||||  ||||||||||||| |||| |||||||||| ||||||||| |||||||| ||||| |||  ||| || | ||||||| ||     
T  3964292 caaaaatcatataaaacataaaattattcaatatcatacaaaatttgtcttgtgctgttctgccttgtattgtgttgtgttgtcttgtgctgttctatca 3964193  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  3964192 agtacttactgttttgca 3964175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 44116943 - 44116862
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || |||||||||| |||||||    
T  44116943 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgacttgtgttgtactgttct 44116862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 10747220 - 10747128
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||| | |||||||||| ||||||||||||  |||||||||||||| ||||||||| | |||||| ||||| |||||| | || |||||||    
T  10747220 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcttgtgctgttctcccttgtattgtgttgttctttcttgtactgtt 10747128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 20609729 - 20609812
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||| ||||| |||||| |||||  ||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  20609729 tcaaaaatcgtatataacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctgt 20609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 121
Target Start/End: Original strand, 53046722 - 53046829
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||| ||||| |||| ||||||||||||| ||||||| | || || ||||||||     
T  53046722 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgttctgtgttgttctgccttgtgttgtactgttctatcttgtattgttctgtt 53046821  T
Q  114 cggtactt 121  Q
    | ||||||    
T  53046822 cagtactt 53046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 2135074 - 2134956
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | || ||  ||||||||    
T  2135074 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcttgtgttgttctgccttgtgttgtactgttctatcttgtaacgttctgtc 2134975  T
Q  114 cggtacttactgttctgca 132  Q
      |||||| ||||| ||||    
T  2134974 tagtacttgctgttttgca 2134956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 29584879 - 29584761
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| | ||||||| ||||| |||| ||||| |||||| |||||| ||||||| | || ||||||||||||    
T  29584879 tcaaaaatcgtataaaataaaaaattactcaatgcaataaaaaatttgttctgtactgttctgccttatgttgtactgttctatcttgtactgttctgtc 29584780  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  29584779 cagtacttgctgttttgca 29584761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 43175573 - 43175455
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccata-aaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||||||||| ||||||| || ||||||||| || ||||| || | ||||||| | || ||||||| ||||    
T  43175573 tcaaaaatcgtataaaacaaaaaattactcaataccataaaaaatttatcgtgtgctgttctgtcttgtattatactgttctatcttgtactgttttgtc 43175474  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  43175473 cagtacttgctgttttgca 43175455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 33364860 - 33364976
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||||||| | |||| |  ||||| ||||||| |||| | || ||||||| ||| |     
T  33364860 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgtcctgggttgttctctcttgtattgtgctattctttcttgtactgttttgtact 33364959  T
Q  116 gtacttactgttctgca 132  Q
    |||||| ||||| ||||    
T  33364960 gtacttgctgttttgca 33364976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 21373914 - 21373826
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||| ||||||||||||||||||||         |||||||||||||||||||| || || ||||||||||  ||||||||||| ||||    
T  21373914 aaattattcaatgccataaaaatttgtcctgtgt--------cttgtgttgtgctgttctgtcttgtattgttctgtccaatacttactgttttgca 21373826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 42636496 - 42636567
Alignment:
Q  27 taaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    |||||||| |||||| | ||| |||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  42636496 taaaacaaaaaattacttaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactattctgt 42636567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 24571274 - 24571173
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||||| |||||| ||||| ||||||||| |||||| ||| ||||| |||||| ||||||  |||||| | ||||| || ||||||| |||||||||    
T  24571274 ataaaacaacaaattactcaatgccataaaaaatttgtcatgtactgttctgccttatgttgtattgttctatcttatagtg-tctgtccagtacttact 24571176  T
Q  125 gtt 127  Q
    |||    
T  24571175 gtt 24571173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 44267745 - 44267691
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgct 70  Q
    |||||| |||||||||||| |||||||| ||||| ||||||||||||| ||||||    
T  44267745 caaaaatcatataaaacaaaaaattattgaatacgataaaaatttgtcttgtgct 44267691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 38213357 - 38213240
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||| | ||||||||| |||||| ||||||||| |||||  |||| || |||| ||| || ||||||||||| |    
T  38213357 caaaaatcgtataaaacaaaaaattactcattgccataaaaaatttgtcatgtgctgttctgcctaatgttatgttgttttgtcttgtactgttctgtac 38213258  T
Q  115 ggtacttactgttctgca 132  Q
      ||||||||||| ||||    
T  38213257 aatacttactgttttgca 38213240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 40094496 - 40094411
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttct 110  Q
    ||||||||| |||||| ||||| ||||||||| |||||| |||| |||| |||||||||||||  |||||| | || |||||||||    
T  40094496 ataaaacaaaaaattactcaatgccataaaaattttgtcatgtgttgttctgccttgtgttgtattgttctatcttgtactgttct 40094411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41694983 - 41695040
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    |||||| | |||||||||| ||||||||||||  ||||||||||||| ||||||||||    
T  41694983 caaaaatcgtataaaacaaaaaattattcaatgtcataaaaatttgttctgtgctgtt 41695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 25954454 - 25954407
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtc 63  Q
    |||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  25954454 caaaaagcgtataaaataaaaaattattcaatatcataaaaatttgtc 25954407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 79
Target Start/End: Original strand, 28625001 - 28625064
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgcct 79  Q
    |||||| | ||||| |||| ||||||||||||||||||||| |||||| |||| |||| |||||    
T  28625001 caaaaatcttataagacaaaaaattattcaataccataaaagtttgtcttgtgttgttctgcct 28625064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 29646069 - 29645970
Alignment:
Q  16 caaaaagcatataaaacaagaaa-ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||| ||||| ||| ||||||||||||||| |||| |||| | |||| ||||||| |||| ||| || || ||||||||||    
T  29646069 caaaaatcgtataaaacaaaaaaattatttaatgccataaaaatttgtcttgtgatgttataccttatgttgtgttgttttgtcttgtattgttctgtcc 29645970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 45690983 - 45691093
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| |||||||||||| | ||||||||||||| |||| | || |  ||| | ||||| |||||||| || ||||||||| |||     
T  45690983 caaaaatcgtataaaacaa-aaattattcaatgctataaaaatttgtcatgtgttattctatcttatattgtgttgttctgtcttgtactgttctatcca 45691081  T
Q  116 gtacttactgtt 127  Q
    ||||||| ||||    
T  45691082 gtacttagtgtt 45691093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 26847307 - 26847271
Alignment:
Q  37 aattattcaataccataaaaatttgtcctgtgctgtt 73  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  26847307 aattattcaataccataaaaatttgtcttgtgttgtt 26847271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 54622878 - 54622926
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcc 64  Q
    |||||| | |||||||||| |||||||||||| ||||||||| ||||||    
T  54622878 caaaaatcgtataaaacaaaaaattattcaatgccataaaaaattgtcc 54622926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 3932933 - 3933027
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    ||||||| | |||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||| ||||||| | ||||||||||    
T  3932933 tcaaaaatcgtataaaacaaaaaattattcaatgccataaaaaatttgtcctgtgctgttttgtcttgtgttgtactgttctatcttatactgtt 3933027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17867838 - 17867720
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  17867838 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtc 17867739  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17867738 cagtacttgctgttttgca 17867720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 17877621 - 17877503
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||    
T  17877621 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgttgttctgccttgtgttgtactgttctatgttgtactgttctgtc 17877522  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  17877521 cagtacttgctgttttgca 17877503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 32409978 - 32410096
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| ||||||||||||  ||||||| ||||||| ||||||||| ||||||||||||| ||||||| | |||||||||||||||    
T  32409978 tcaaaaatcgtataaaacaaaaaattattcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctatcttatactgttctgtc 32410077  T
Q  114 cggtacttactgttctgca 132  Q
      ||| |||||||| ||||    
T  32410078 tagtatttactgttttgca 32410096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 10324247 - 10324355
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| ||||| |||||||||| | |||||||||||  |||||| | || ||||||||||||||||||||||    
T  10324247 tataaaacaaaaaattactcaatcccataaaaaatttgttctgtgctgttctaccttgtgttgtaatgttctatcttgtactgttctgtccggtacttac 10324346  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  10324347 tgttttgca 10324355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 10960002 - 10959886
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| | || ||||||| ||||||||||||||| |||| |||| ||||||||| |||| |||||||| || ||||||||| |||     
T  10960002 caaaaatcgtataaaacaaaatatcattcaatgccataaaaatttgtcatgtgttgttctgccttgtgctgtgatgttctgtcttgtactgttctatcca 10959903  T
Q  116 gtacttactgttctgca 132  Q
    |||||||||||| ||||    
T  10959902 gtacttactgttttgca 10959886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 127
Target Start/End: Original strand, 15277407 - 15277519
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| | ||||||| ||||| ||||| |||||| ||||||||||| ||||||| | ||||||||||||||||    
T  15277407 caaaaatcgtataaaacaacaaattactcaatgctataaaaaatttgttctgtgttgttttaccttgtgttgtactgttctatcttatactgttctgtcc 15277506  T
Q  115 ggtacttactgtt 127  Q
     ||||||||||||    
T  15277507 agtacttactgtt 15277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 18597284 - 18597396
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||| |  |||| |||| | ||| |||||||| |||||||  || |||||||||||||    
T  18597284 tcaaaaatcatataaaacaaaaaattattcaataccataaaaatttattatgtgttgttctacctagtgttgtgttgttctgctttgtactgttctgtcc 18597383  T
Q  115 ggtacttactgtt 127  Q
      |||||||||||    
T  18597384 aatacttactgtt 18597396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 24203356 - 24203248
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |  | |||||||||||||  ||||| |    
T  24203356 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttttgccttgtgttgtactgttctatcatgtactgttctgtccaatacttgc 24203257  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  24203256 tgttttgca 24203248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 124
Target Start/End: Original strand, 14925592 - 14925691
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  ||||||||||||  |||| ||||||||||||||||||| |||||||||||||| |||||| | || ||||||| ||||| |||||||||    
T  14925592 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttttactgttatgtcccgtacttact 14925691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 18057512 - 18057405
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||  ||||||||||||  |||| |||||||||||||||| || ||||||||||||||||||||| | || ||||||||| |||  ||||||||    
T  18057512 tataaaacataaaattattcaatgtcatacaaatttgtcctgtgctattatgccttgtgttgtgctgttctatcttttactgttctatccaatacttact 18057413  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  18057412 gttttgca 18057405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 114
Target Start/End: Complemental strand, 17443264 - 17443166
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||  ||||||||||||  |||| ||||||||||||||||||| |||||||||||||| |||||| | || |||||||||||||    
T  17443264 caaaaatcgtataaaacataaaattattcaatgtcatacaaatttgtcctgtgctgttatgccttgtgttgtgttgttctatcttgtactgttctgtcc 17443166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 29814867 - 29814750
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaat-ttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| | |||| ||||| |||||||||  |||||||||| |||| ||||||||||||| ||||||| | || |||||||||||||    
T  29814867 caaaaatcgtataaaacaaaacattactcaatgccataaaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 29814768  T
Q  115 ggtacttactgttctgca 132  Q
     |||||||||||| ||||    
T  29814767 agtacttactgttttgca 29814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 132
Target Start/End: Complemental strand, 11212249 - 11212142
Alignment:
Q  26 ataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    ||||||||| |||||| ||||  |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||  ||||| ||    
T  11212249 ataaaacaaaaaattactcaaggccataaaacatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtccaatacttgct 11212150  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  11212149 gttttgca 11212142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 24242667 - 24242549
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||||||||||||| ||||||||||||| || || | | || ||||||||||||    
T  24242667 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcctgtgctgttctgccttgtgttgtactcttttatcttgtactgttctgtc 24242568  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  24242567 cagtacttgctgttttgca 24242549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14808127 - 14808223
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgt 112  Q
    |||||| | |||||||| | |||||||||||| |||||||||||||||||||||| || | |||||| ||||| |||||| | || |||||||||||    
T  14808127 caaaaatcgtataaaactaaaaattattcaattccataaaaatttgtcctgtgctattctcccttgtattgtgttgttctttcttgtactgttctgt 14808223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 32132507 - 32132587
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttct 95  Q
    |||||| | |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||    
T  32132507 caaaaatcgtataaaacaacaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttct 32132587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 2614899 - 2614792
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | ||||||| || |||||| ||||| ||||||||| |||||| |||| |||| ||||||||||||| ||||||| | |||||||||| ||||    
T  2614899 tcaaaaatcgtataaaataaaaaattactcaatgccataaaaaatttgtcatgtgttgttctgccttgtgttgtactgttctatcttatactgttttgtc 2614800  T
Q  114 cggtactt 121  Q
    | ||||||    
T  2614799 cagtactt 2614792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 10485159 - 10485049
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| | |||||||||| ||||||||||||  |||||| |||||||||||| || ||| |||||| |||||||||||| | || ||||||||||| |     
T  10485159 caaaaatcgtataaaacaaaaaattattcaatgtcataaatatttgtcctgtgttg-tttcccttgtattgtgctgttctttcttgtactgttctgtact 10485061  T
Q  116 gtacttactgtt 127  Q
    |||||| |||||    
T  10485060 gtacttgctgtt 10485049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 28502423 - 28502344
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||| |||||||||| |||| ||||||||||||| ||||||| | || ||||||||||||| |||||||||||| ||||    
T  28502423 aaaaaattgtcctgtgttgttctgccttgtgttgtactgttctatcttgtactgttctgtccagtacttactgttttgca 28502344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 15277063 - 15277181
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt-gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| |||||||| ||| ||| |||| |||| |||||| |||||| ||||||| | || ||||||||||||    
T  15277063 tcaaaaatcttataaaacaaaaaattactcaatgccataaaatttttgtcatgtgttgttctgccttatgttgtactgttctatcttgtactgttctgtc 15277162  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  15277163 cagtacttgctgttttgca 15277181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 167051 - 167132
Alignment:
Q  17 aaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||| |||||||||||| |||||| |||||  ||||||| ||||||| ||||||||| ||||||||||||| |||||||||    
T  167051 aaaaatcatataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactgttctgt 167132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 36 - 129
Target Start/End: Complemental strand, 32860033 - 32859940
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttct 129  Q
    |||||||||||||||||||||||||||  ||||||||| |||||| | ||||| ||| || | || ||||||| |||||  |||||||||||||    
T  32860033 aaattattcaataccataaaaatttgtattgtgctgttctgccttatattgtgttgtcctatcttgtactgttatgtccaatacttactgttct 32859940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 132
Target Start/End: Original strand, 4494263 - 4494342
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    |||||||||||||||| |||| |||||| |||||||||||||| |  | ||||||||||||  |||||||||||| ||||    
T  4494263 aaaaatttgtcctgtgttgttctgccttatgttgtgctgttctatcctgtactgttctgtctagtacttactgttttgca 4494342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 23636216 - 23636109
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttact 124  Q
    |||||||||| |||||||||||| |||||||||  |||| ||| | ||| |||||| ||||||| |||||||| || ||||||| | ||| ||| |||||    
T  23636216 tataaaacaaaaaattattcaatgccataaaaaactgtcatgtacagttctgccttctgttgtgttgttctgtcttgtactgttatatccagtatttact 23636117  T
Q  125 gttctgca 132  Q
    ||| ||||    
T  23636116 gttttgca 23636109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 34176833 - 34176750
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||||||| || ||| |||||| |||||||||    
T  34176833 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgtcttatgttgtactgttctgt 34176750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 11675501 - 11675618
Alignment:
Q  16 caaaaagcatataaaacaagaaa-ttattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||| ||||||||| | ||| ||||||||| |||||| |||| |||| ||||||| |||||||| || || |||| |||||    
T  11675501 caaaaatcgtataaaacaaaaaaattattcaatgctatagaaatttgtcatgtgctattttaccttttgttgtgttgttctgtcttgtattgttatgtcc 11675600  T
Q  115 ggtacttactgttctgca 132  Q
      ||||||||||| ||||    
T  11675601 aatacttactgttttgca 11675618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 31870236 - 31870319
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    |||||||||| |||||||||||| ||||||||||||||| |||| |||| | |||| | ||||| |||||| | || |||||||    
T  31870236 tataaaacaaaaaattattcaatgccataaaaatttgtcatgtgttgttctcccttatattgtgttgttctttcttgtactgtt 31870319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 32805442 - 32805363
Alignment:
Q  53 aaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttactgttctgca 132  Q
    ||||||||||| ||||||||| |||||||||||||  |||||| | || ||||||| ||||| |||||| ||||| ||||    
T  32805442 aaaaatttgtcatgtgctgttctgccttgtgttgtattgttctatcttgtactgttatgtccagtacttgctgttttgca 32805363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 122
Target Start/End: Complemental strand, 29054359 - 29054254
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccg 115  Q
    |||||| ||||||| |||  ||||||||||||||||| ||||||| || ||||||||| || ||| ||||||| ||| || | || ||||||| |||||     
T  29054359 caaaaatcatataatacagaaaattattcaataccat-aaaatttatcttgtgctgttctgtcttatgttgtgttgtcctatcttgtactgttatgtcca 29054261  T
Q  116 gtactta 122  Q
    |||||||    
T  29054260 gtactta 29054254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 3259686 - 3259581
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaattt------gtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgtt 108  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||      ||| |||| |||| ||||||||||||| ||||||| | || |||||||    
T  3259686 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtcatgtcatgtgttgttctgccttgtgttgtactgttctatcttgtactgtt 3259587  T
Q  109 ctgtcc 114  Q
    ||||||    
T  3259586 ctgtcc 3259581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 7396270 - 7396302
Alignment:
Q  36 aaattattcaataccataaaaatttgtcctgtg 68  Q
    |||||||||||||||||||||||||||| ||||    
T  7396270 aaattattcaataccataaaaatttgtcatgtg 7396302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 132
Target Start/End: Original strand, 43050 - 43159
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtactta 122  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||  | || |||||||| ||||||||||||| ||| ||||| ||||||  |||||||    
T  43050 catataaaacaagaaattattcaataccacaaaaatttgatctgtattattatgccttgtattgtgctgttctgcattgtactgctctgtctagtactta 43149  T
Q  123 ctgttctgca 132  Q
    ||||| ||||    
T  43150 ctgttttgca 43159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 132
Target Start/End: Complemental strand, 101942 - 101834
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| ||||| ||||||||| |||||||||||||||| | |||| | |||| ||||||| | ||||||||||||||||||||||| |    
T  101942 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctaccttatattgtactgttctatcttatactgttctgtccggtacttgc 101843  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  101842 tgttttgca 101834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 4682 - 4772
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||||||| |||||| ||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||| | || |||||||||||||    
T  4682 tataaaacaaaaaattactcaatgccataaaaaatttgtcctgtgctgttctgccttgtgttgtactgttctatcttgtactgttctgtcc 4772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 1744 - 1814
Alignment:
Q  23 catataaaacaagaaattattcaataccataaaaatttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| |||| |  ||||||||||||||||    
T  1744 catataaaacaaaaaattattcaataccataaaaatttgttctgtgttgttctctcttgtgttgtgctgtt 1814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 23580 - 23462
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| ||||||| |||||||| |||||||||||||  |||||| | || ||||||||||||    
T  23580 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgtccagtgctgttctgccttgtgttgtattgttctatcttgtactgttctgtc 23481  T
Q  114 cggtacttactgttctgca 132  Q
    | ||| || ||||| ||||    
T  23480 cagtatttgctgttttgca 23462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 132
Target Start/End: Original strand, 2441 - 2549
Alignment:
Q  25 tataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtccggtacttac 123  Q
    |||||||||| |||||| |||||  ||||||| ||||||| ||||||||| ||||||||||||| || |||| | || ||||||||||||| |||||| |    
T  2441 tataaaacaaaaaattactcaatgtcataaaaaatttgtcatgtgctgttctgccttgtgttgtactattctatcttgtactgttctgtccagtacttgc 2540  T
Q  124 tgttctgca 132  Q
    |||| ||||    
T  2541 tgttttgca 2549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 51442 - 51324
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| |||||| ||||||||| || ||||| || | ||||||| |||| ||||||||||||    
T  51442 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttgtcttgtgctgttctgtcttgtattatactgttctatattgtactgttctgtc 51343  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  51342 cagtacttgctgttttgca 51324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 15174 - 15057
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaaatttgtcc-tgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| |||||| ||||| |||||||  ||| | | |||| |||| |||||| |||||| ||||||| | || |||||||||||||    
T  15174 caaaaatcttataaaacaacaaattactcaatgccataaattttttttcatgtgttgttctgccttatgttgtactgttctattttgtactgttctgtcc 15075  T
Q  115 ggtacttactgttctgca 132  Q
    ||||||||||||| ||||    
T  15074 ggtacttactgttttgca 15057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 15470 - 15553
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgttctgt 97  Q
    ||||||| | |||||||||| |||||| |||||  |||||||| ||| |||||||||||| ||||||||||||| |||||||||    
T  15470 tcaaaaatcgtataaaacaaaaaattactcaatgtcataaaaaatttatcctgtgctgttctgccttgtgttgtactgttctgt 15553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 12629 - 12747
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| | |||||| ||||||| ||||||||| || | |||||||| ||||||| | || ||||||||| ||    
T  12629 tcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatc 12728  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  12729 cagtacttgctgttttgca 12747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 18147 - 18265
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtc 113  Q
    ||||||| | |||||||||| |||||| ||||| | |||||| ||||||| ||||||||| || | |||||||| ||||||| | || ||||||||| ||    
T  18147 tcaaaaatcgtataaaacaaaaaattactcaatgctataaaaaatttgtcttgtgctgttctgacatgtgttgtactgttctatcttgtactgttctatc 18246  T
Q  114 cggtacttactgttctgca 132  Q
    | |||||| ||||| ||||    
T  18247 cagtacttgctgttttgca 18265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 19183 - 19262
Alignment:
Q  15 tcaaaaagcatataaaacaagaaattattcaataccataaaaa-tttgtcctgtgctgttttgccttgtgttgtgctgtt 93  Q
    ||||||| | |||||||||| |||||| ||||| ||||||||| |||| | ||||||||| | ||||||||||| |||||    
T  19183 tcaaaaatcgtataaaacaaaaaattactcaatgccataaaaaatttgccatgtgctgttctaccttgtgttgtactgtt 19262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 2589 - 2695
Alignment:
Q  16 caaaaagcatataaaacaagaaattattcaataccataaaa-atttgtcctgtgctgttttgccttgtgttgtgctgttctgtattatactgttctgtcc 114  Q
    |||||| | |||||||||| ||||||  ||||  ||||||| ||||||| |||| |||| | |||||||||||  |||||| | |||||||||| |||||    
T  2589 caaaaatcgtataaaacaaaaaattacccaatctcataaaaaatttgtcatgtgttgttctaccttgtgttgtattgttctatcttatactgttatgtcc 2688  T
Q  115 ggtactt 121  Q
     ||||||    
T  2689 agtactt 2695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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