View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4990-Insertion-2 (Length: 317)
Name: NF4990-Insertion-2
Description: NF4990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4990-Insertion-2 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 27 - 317
Target Start/End: Original strand, 32739113 - 32739403
Alignment:
| Q |
27 |
tgcaattcagctgcaatgtcatgaacatggatgtttatcattccatagcttctcttccatataatatagatgagaaaatatgagagaagagtacagatta |
126 |
Q |
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| T |
32739113 |
tgcaattcagctgcaatgtcatgaacatggatgtttatcattccatagcttctcttccatatcatatagatgagaaaatatgagagaagagtacaaatta |
32739212 |
T |
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| Q |
127 |
agtgaagacgaaagacacaaattcgcatgtacatcacttacactctaatataagtgacccaagaaagggtagttgtccaactagtgtttaaaattaaatt |
226 |
Q |
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| T |
32739213 |
agtgaagaggaaagacacaaattcgcatgtacattacttacactctaatataagtgacccaagaaagggtagttgtccaactagtgtttaaaattaaatt |
32739312 |
T |
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| Q |
227 |
gatcaatctattttatttattttttgacaatattcaaacatgtaaaatagtgtatataagtcattattttgaccaaaacctttatcatgtg |
317 |
Q |
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| T |
32739313 |
gatcaatccattttatttattttttgacaatattcaaacatgtaaaataatctatataagtcattattttgaccaaaacctttatcatgtg |
32739403 |
T |
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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 7795056 - 7795024
Alignment:
| Q |
176 |
ataagtgacccaagaaagggtagttgtccaact |
208 |
Q |
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| T |
7795056 |
ataagtgacccaagaaagggttgttgtccaact |
7795024 |
T |
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