View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4990_low_9 (Length: 298)
Name: NF4990_low_9
Description: NF4990
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4990_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 42 - 282
Target Start/End: Original strand, 41142032 - 41142272
Alignment:
| Q |
42 |
ggaacctcataacgctatattcacagatttatgaaaagaatgcctatacttaattcttcaagtctataattaaagcaccctaattttgaggagtaaaaac |
141 |
Q |
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| T |
41142032 |
ggaacctcataacgctatattcacagatttatgaaaagaatgcctatacttaattcatcaagtctataattaaagcaccctaattttgaggagtaaaaac |
41142131 |
T |
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| Q |
142 |
atagcgatgatgaaagtaaaatacacaatattcagaattcagaagaataacggaaacagcaaaagggattgaatcataccggcggtgcgatcttgtattc |
241 |
Q |
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| T |
41142132 |
atagcgatgatgaaagtaaaatacacaatattcagaattcagaagaataacggaaacagaaaaagggattgaatcataccggcggtgcgatcttgtattc |
41142231 |
T |
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| Q |
242 |
cggtttgatggcaaccttaatgcccaatcctactgcaaaat |
282 |
Q |
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| T |
41142232 |
cggtttgatggcaaccttaatgcccaatcctactgcaaaat |
41142272 |
T |
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