View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4992-Insertion-4 (Length: 423)

Name: NF4992-Insertion-4
Description: NF4992
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4992-Insertion-4
NF4992-Insertion-4
[»] chr5 (30 HSPs)
chr5 (8-413)||(40753188-40753595)
chr5 (281-410)||(32129646-32129775)
chr5 (281-410)||(4895764-4895893)
chr5 (281-410)||(35660638-35660767)
chr5 (280-410)||(11775708-11775839)
chr5 (281-410)||(14349721-14349849)
chr5 (281-410)||(37266648-37266777)
chr5 (282-410)||(4592719-4592846)
chr5 (288-410)||(18625450-18625572)
chr5 (281-410)||(13032036-13032164)
chr5 (288-410)||(39902339-39902461)
chr5 (281-391)||(1475686-1475796)
chr5 (281-399)||(8441011-8441129)
chr5 (279-410)||(34827109-34827238)
chr5 (283-405)||(10173867-10173985)
chr5 (314-395)||(32793324-32793405)
chr5 (345-407)||(28142807-28142870)
chr5 (355-409)||(36290593-36290647)
chr5 (283-410)||(3057183-3057310)
chr5 (356-409)||(3041338-3041391)
chr5 (307-359)||(43309061-43309113)
chr5 (355-402)||(2984427-2984474)
chr5 (323-402)||(3057375-3057454)
chr5 (356-407)||(10362046-10362097)
chr5 (368-407)||(29340999-29341038)
chr5 (358-409)||(41660100-41660151)
chr5 (355-409)||(11960620-11960674)
chr5 (297-362)||(16500484-16500549)
chr5 (372-409)||(40162737-40162774)
chr5 (308-352)||(30355212-30355256)
[»] chr8 (30 HSPs)
chr8 (281-410)||(30426698-30426827)
chr8 (280-407)||(41511178-41511305)
chr8 (281-406)||(36991273-36991398)
chr8 (279-410)||(28069634-28069765)
chr8 (281-410)||(10652646-10652776)
chr8 (281-407)||(28318934-28319060)
chr8 (281-410)||(10672541-10672670)
chr8 (287-410)||(24101939-24102062)
chr8 (282-410)||(40695276-40695404)
chr8 (281-410)||(44859196-44859324)
chr8 (289-404)||(8412179-8412294)
chr8 (289-410)||(45113195-45113316)
chr8 (279-390)||(12177613-12177724)
chr8 (279-390)||(12422041-12422152)
chr8 (283-407)||(27490038-27490162)
chr8 (355-406)||(26749581-26749632)
chr8 (355-409)||(1937185-1937239)
chr8 (281-349)||(5033023-5033091)
chr8 (298-376)||(37966505-37966583)
chr8 (355-396)||(30796269-30796310)
chr8 (362-409)||(34612562-34612609)
chr8 (309-405)||(36748525-36748617)
chr8 (354-406)||(24557214-24557266)
chr8 (297-404)||(6014127-6014234)
chr8 (355-409)||(3763552-3763606)
chr8 (372-409)||(17867690-17867727)
chr8 (355-388)||(24241672-24241705)
chr8 (283-348)||(39143443-39143508)
chr8 (289-337)||(16999758-16999806)
chr8 (355-407)||(42761704-42761756)
[»] chr4 (47 HSPs)
chr4 (280-407)||(12241440-12241567)
chr4 (280-410)||(5763191-5763321)
chr4 (281-410)||(19901947-19902076)
chr4 (281-410)||(34778338-34778467)
chr4 (279-410)||(56558194-56558325)
chr4 (280-410)||(18207069-18207199)
chr4 (280-390)||(12153087-12153197)
chr4 (281-410)||(23610559-23610688)
chr4 (300-410)||(3952199-3952309)
chr4 (281-410)||(33247159-33247286)
chr4 (288-410)||(38079749-38079871)
chr4 (281-407)||(5416497-5416625)
chr4 (280-376)||(52018699-52018795)
chr4 (288-410)||(24073541-24073662)
chr4 (281-407)||(47922107-47922233)
chr4 (281-410)||(39862434-39862563)
chr4 (292-410)||(33262581-33262699)
chr4 (281-382)||(17080697-17080798)
chr4 (322-410)||(30567859-30567947)
chr4 (283-406)||(3326435-3326559)
chr4 (289-410)||(31862249-31862370)
chr4 (343-410)||(12312505-12312572)
chr4 (292-371)||(12312571-12312650)
chr4 (283-407)||(25442206-25442331)
chr4 (289-410)||(47922396-47922517)
chr4 (362-409)||(56269106-56269153)
chr4 (355-409)||(5524438-5524492)
chr4 (355-409)||(48084555-48084609)
chr4 (355-409)||(37002281-37002335)
chr4 (355-405)||(42010108-42010158)
chr4 (316-381)||(43447638-43447704)
chr4 (355-409)||(56453850-56453904)
chr4 (323-389)||(33841854-33841920)
chr4 (314-407)||(1871228-1871320)
chr4 (295-371)||(26428574-26428650)
chr4 (367-403)||(36688224-36688260)
chr4 (323-410)||(23474070-23474157)
chr4 (355-390)||(47834572-47834607)
chr4 (356-390)||(5361435-5361469)
chr4 (354-404)||(46804621-46804671)
chr4 (372-409)||(25219003-25219040)
chr4 (372-409)||(32146510-32146547)
chr4 (372-409)||(46238974-46239011)
chr4 (372-409)||(53526096-53526133)
chr4 (372-409)||(55160401-55160438)
chr4 (355-407)||(4404281-4404333)
chr4 (367-407)||(52030726-52030766)
[»] scaffold0012 (1 HSPs)
scaffold0012 (281-410)||(207980-208109)
[»] chr6 (26 HSPs)
chr6 (281-410)||(1249175-1249304)
chr6 (281-410)||(4804365-4804494)
chr6 (281-410)||(7162001-7162130)
chr6 (281-410)||(29698080-29698209)
chr6 (281-410)||(21159398-21159523)
chr6 (308-410)||(17944106-17944208)
chr6 (313-410)||(12412586-12412683)
chr6 (281-390)||(32737791-32737900)
chr6 (288-410)||(27826462-27826584)
chr6 (281-410)||(13089778-13089899)
chr6 (289-410)||(227593-227714)
chr6 (308-402)||(30460764-30460858)
chr6 (312-390)||(1518327-1518405)
chr6 (355-409)||(24484870-24484924)
chr6 (314-390)||(1516238-1516314)
chr6 (323-399)||(2800651-2800727)
chr6 (355-407)||(7215884-7215936)
chr6 (367-402)||(2720376-2720411)
chr6 (359-410)||(13888552-13888603)
chr6 (355-409)||(2142323-2142377)
chr6 (289-335)||(13888617-13888663)
chr6 (355-409)||(32254061-32254115)
chr6 (372-409)||(7098226-7098263)
chr6 (354-390)||(1515573-1515609)
chr6 (355-395)||(11180472-11180512)
chr6 (323-359)||(17398774-17398810)
[»] chr1 (33 HSPs)
chr1 (281-410)||(12380939-12381068)
chr1 (281-410)||(12385006-12385135)
chr1 (281-410)||(50484303-50484432)
chr1 (281-407)||(12151684-12151810)
chr1 (281-410)||(40328193-40328324)
chr1 (281-390)||(45977939-45978048)
chr1 (291-410)||(50294092-50294211)
chr1 (281-386)||(7841763-7841868)
chr1 (279-402)||(23861992-23862116)
chr1 (281-410)||(48327183-48327312)
chr1 (288-387)||(2845189-2845289)
chr1 (289-410)||(18976334-18976452)
chr1 (288-407)||(46608409-46608523)
chr1 (289-402)||(23916013-23916124)
chr1 (283-402)||(5047418-5047536)
chr1 (313-410)||(24977189-24977286)
chr1 (355-409)||(52280069-52280123)
chr1 (355-407)||(39426201-39426253)
chr1 (281-328)||(35977883-35977930)
chr1 (355-402)||(26372243-26372290)
chr1 (355-409)||(30077674-30077728)
chr1 (313-407)||(32887812-32887906)
chr1 (283-407)||(44483687-44483810)
chr1 (283-348)||(10646833-10646898)
chr1 (355-404)||(26860085-26860134)
chr1 (314-379)||(45970796-45970861)
chr1 (351-402)||(7844975-7845026)
chr1 (323-396)||(19910511-19910583)
chr1 (367-410)||(24413311-24413354)
chr1 (355-409)||(26768886-26768940)
chr1 (372-409)||(6948862-6948899)
chr1 (323-372)||(40988674-40988723)
chr1 (355-403)||(46045678-46045726)
[»] chr2 (27 HSPs)
chr2 (280-410)||(35316741-35316871)
chr2 (288-410)||(28564815-28564938)
chr2 (288-410)||(13238605-13238727)
chr2 (288-390)||(39465699-39465801)
chr2 (280-409)||(23259517-23259646)
chr2 (281-378)||(41983401-41983497)
chr2 (292-378)||(374499-374585)
chr2 (281-385)||(10877619-10877724)
chr2 (281-390)||(45625111-45625216)
chr2 (355-409)||(374984-375038)
chr2 (351-407)||(21454526-21454582)
chr2 (354-406)||(30709100-30709152)
chr2 (283-369)||(2061296-2061382)
chr2 (323-389)||(12949429-12949494)
chr2 (355-405)||(23459880-23459930)
chr2 (355-409)||(29188644-29188698)
chr2 (356-404)||(8988847-8988895)
chr2 (354-404)||(2063343-2063393)
chr2 (343-399)||(11864856-11864912)
chr2 (355-390)||(3354812-3354847)
chr2 (343-389)||(4603159-4603205)
chr2 (355-409)||(30840872-30840925)
chr2 (372-409)||(13780506-13780543)
chr2 (372-409)||(40254180-40254217)
chr2 (355-407)||(4446928-4446980)
chr2 (361-393)||(19908777-19908809)
chr2 (351-391)||(30217477-30217517)
[»] scaffold0035 (1 HSPs)
scaffold0035 (281-410)||(16426-16555)
[»] chr7 (35 HSPs)
chr7 (281-402)||(21151069-21151190)
chr7 (284-410)||(16366438-16366564)
chr7 (281-410)||(25084757-25084886)
chr7 (283-412)||(47226101-47226229)
chr7 (281-410)||(12139245-12139373)
chr7 (288-410)||(18198180-18198302)
chr7 (293-410)||(7362497-7362614)
chr7 (292-410)||(9559083-9559201)
chr7 (281-407)||(45260459-45260586)
chr7 (288-407)||(4888391-4888510)
chr7 (281-410)||(44647882-44648010)
chr7 (289-410)||(33450431-33450552)
chr7 (289-410)||(47500312-47500433)
chr7 (283-407)||(29630967-29631091)
chr7 (344-410)||(39855842-39855908)
chr7 (288-407)||(32915883-32915999)
chr7 (323-395)||(40019640-40019712)
chr7 (355-406)||(47799933-47799984)
chr7 (355-405)||(30588526-30588576)
chr7 (355-407)||(19889066-19889118)
chr7 (289-410)||(34985975-34986095)
chr7 (323-408)||(46802362-46802445)
chr7 (354-407)||(8149599-8149652)
chr7 (283-396)||(30153225-30153337)
chr7 (355-407)||(32916160-32916212)
chr7 (345-404)||(8734502-8734560)
chr7 (356-403)||(11828945-11828992)
chr7 (367-413)||(989132-989178)
chr7 (372-410)||(19027713-19027751)
chr7 (372-410)||(20726885-20726923)
chr7 (309-399)||(40023296-40023385)
chr7 (372-409)||(4269187-4269224)
chr7 (372-409)||(14696788-14696825)
chr7 (372-409)||(30102501-30102538)
chr7 (369-406)||(47080433-47080470)
[»] chr3 (22 HSPs)
chr3 (281-407)||(43719979-43720105)
chr3 (283-410)||(34373750-34373877)
chr3 (281-406)||(2229900-2230025)
chr3 (293-410)||(34373614-34373731)
chr3 (308-410)||(27033595-27033697)
chr3 (281-410)||(40851690-40851820)
chr3 (281-410)||(19830460-19830591)
chr3 (281-410)||(12402883-12403012)
chr3 (293-413)||(46167322-46167442)
chr3 (289-410)||(48084744-48084865)
chr3 (283-410)||(550845-550972)
chr3 (314-413)||(566800-566898)
chr3 (355-409)||(42613071-42613125)
chr3 (289-410)||(40810385-40810505)
chr3 (355-409)||(31523698-31523752)
chr3 (292-386)||(52859433-52859528)
chr3 (355-405)||(49679304-49679354)
chr3 (355-403)||(1995435-1995483)
chr3 (355-390)||(27959098-27959133)
chr3 (288-385)||(2310235-2310330)
chr3 (355-389)||(3009230-3009264)
chr3 (283-359)||(32577451-32577526)
[»] scaffold0250 (3 HSPs)
scaffold0250 (281-410)||(7064-7193)
scaffold0250 (177-277)||(6489-6585)
scaffold0250 (112-171)||(6611-6670)
[»] scaffold0006 (1 HSPs)
scaffold0006 (281-390)||(73889-73998)
[»] scaffold0456 (1 HSPs)
scaffold0456 (313-390)||(13645-13722)
[»] scaffold0009 (1 HSPs)
scaffold0009 (281-410)||(6464-6585)
[»] scaffold0008 (1 HSPs)
scaffold0008 (288-410)||(9230-9349)
[»] scaffold0126 (1 HSPs)
scaffold0126 (288-407)||(22474-22593)
[»] scaffold0171 (1 HSPs)
scaffold0171 (355-406)||(17339-17390)
[»] scaffold0468 (1 HSPs)
scaffold0468 (285-386)||(5531-5632)
[»] scaffold0664 (1 HSPs)
scaffold0664 (372-409)||(4731-4768)
[»] scaffold0252 (1 HSPs)
scaffold0252 (313-382)||(10531-10600)


Alignment Details
Target: chr5 (Bit Score: 389; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 389; E-Value: 0
Query Start/End: Original strand, 8 - 413
Target Start/End: Complemental strand, 40753595 - 40753188
Alignment:
Q  8 gggggtgtgtatgccgtgctgctgccctttagtttccttctggtgtatcggtttctactgtgagcttctgttttgccttcaatgttgtttgattcaagta 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40753595 gggggtgtgtatgccgtgctgctgccctttagtttccttctggtgtatcggtttctactgtgagcttctgttttgccttcaatgttgtttgatttaagta 40753496  T
Q  108 tcattgttgtatggatggggtaggtacttggtagtttatgttatgcgctacctgggagtgcttgctggaattgtttttaggtgtgttgtatttcttgctt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753495 tcattgttgtatggatggggtaggtacttggtagtttatgttatgcgctacctgggagtgcttgctggaattgtttttaggtgtgttgtatttcttgctt 40753396  T
Q  208 cggggatagatagt--gagacaagggtatgcatttggtttccttctccatttctatactttggcctcattatctagggttaggatcctctccatttatgt 305  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753395 cggggatagatagtgagagacaagggtatgcatttggtttccttctccatttctatactttggcctcattatctagggttaggatcctctccatttatgt 40753296  T
Q  306 gcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40753295 gcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 40753196  T
Q  406 accatata 413  Q
    ||||||||    
T  40753195 accatata 40753188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 32129775 - 32129646
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  32129775 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 32129676  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  32129675 tgggacccacttagtggtaggacccaccat 32129646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 4895893 - 4895764
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||| ||||||| || |||| |||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  4895893 gggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 4895794  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  4895793 tgggacccacttagtggtaggacccaccat 4895764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 35660767 - 35660638
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||| ||||||||| |||| | |||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  35660767 gggttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 35660668  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  35660667 tgggacccacttagtggtaggacccaccat 35660638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 280 - 410
Target Start/End: Original strand, 11775708 - 11775839
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttg-aaaaaagtaaaatataattaatgat 378  Q
    ||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||     
T  11775708 agggttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgac 11775807  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||||| |||||||    
T  11775808 ggtgggacccacttagtggtaggatccaccat 11775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 14349721 - 14349849
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| |||| |||||||||||||| |||| ||||||||||||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  14349721 gggttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatgg 14349819  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  14349820 tgggacccacttagtggtaggacccaccat 14349849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 37266648 - 37266777
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||| ||| || | |||||||| ||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  37266648 gggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgatgg 37266747  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||| ||||||||||    
T  37266748 tgggacccacttagtggtatgacccaccat 37266777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 282 - 410
Target Start/End: Original strand, 4592719 - 4592846
Alignment:
Q  282 ggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggt 381  Q
    |||||| |||||||||||||||||| |||| |||||||| ||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||    
T  4592719 ggttagaatcctctccatttatgtgtttctccatttcttcaatttggagagataata-cacataaaatattgaaaaaagtaaaatataattaatgatggt 4592817  T
Q  382 gggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||| ||||||||||    
T  4592818 gggacccacttagtggtaagacccaccat 4592846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 288 - 410
Target Start/End: Complemental strand, 18625572 - 18625450
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| || |  |||||||| |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  18625572 gatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacc 18625473  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||||    
T  18625472 cacttagtggtaggacccaccat 18625450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 13032036 - 13032164
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  13032036 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgatgg 13032134  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||| ||||||||||||| ||||||    
T  13032135 tgggacccatttagtggtaggactcaccat 13032164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 39902339 - 39902461
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||| | |    
T  39902339 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaatc 39902438  T
Q  388 cacttagtggtaggacccaccat 410  Q
    || ||||||||||||||||||||    
T  39902439 catttagtggtaggacccaccat 39902461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 1475796 - 1475686
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||| |||||||||| || |||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  1475796 gggttaggatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1475697  T
Q  381 tgggacccact 391  Q
    |||||||||||    
T  1475696 tgggacccact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 399
Target Start/End: Complemental strand, 8441129 - 8441011
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||| |||||||||||||| |||| | |||| | ||||||||||||||||  |||||| |||||| |||||||||||||||||||||||||||    
T  8441129 gggttaggatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatgg 8441030  T
Q  381 tgggacccacttagtggta 399  Q
    |||||| ||||||||||||    
T  8441029 tgggacacacttagtggta 8441011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 34827109 - 34827238
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaa-aagtaaaatataattaatga 377  Q
    |||||||||||||||| |||||||| || || | |||||||| |||||| |||||||||  ||||  |||| ||||||| ||||||||||||||||| ||    
T  34827109 tagggttaggatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaaga 34827205  T
Q  378 tggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||| |||||||    
T  34827206 tggtgggacccacttagtggtaggatccaccat 34827238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 10173867 - 10173985
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| |||||||||||||||||| ||||| |||||| || |||||||||||||||  |||    ||| ||||||||||||||| |||||||||||||||     
T  10173867 gttaagatcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggta 10173962  T
Q  383 ggacccacttagtggtaggaccc 405  Q
    | ||||| |||||| ||||||||    
T  10173963 gaacccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 395
Target Start/End: Original strand, 32793324 - 32793405
Alignment:
Q  314 atttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagt 395  Q
    |||||||| ||||| |||||||||  |  |||||||||||||||||||||||||||||| ||||| |||||||| |||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagt 32793405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 28142870 - 28142807
Alignment:
Q  345 aaaatcttgaaaaaa-gtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  28142870 aaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 36290593 - 36290647
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  36290593 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccacca 36290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 3057310 - 3057183
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| |||| |||||| ||||||   ||| ||||||||  ||||| |||||||||  ||| |||| | || |||||||||||||||||||||||||  ||    
T  3057310 gttaagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatg 3057211  T
Q  383 ggacccacttagtggtaggacccaccat 410  Q
     ||| |||||| |||||||| |||||||    
T  3057210 tgactcacttaatggtaggatccaccat 3057183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 356 - 409
Target Start/End: Complemental strand, 3041391 - 3041338
Alignment:
Q  356 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||| ||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  3041391 aaaaataaaaaataattaatgatggtgggacccgcttagtgataggacccacca 3041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 43309061 - 43309113
Alignment:
Q  307 cttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaa 359  Q
    ||||| |||||||| |||||| |||||||||  ||||||||||||||||||||    
T  43309061 cttctccatttcttcaatttgaagagataaagacacataaaatcttgaaaaaa 43309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 402
Target Start/End: Complemental strand, 2984474 - 2984427
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtagga 402  Q
    ||||| ||||| ||||||||||||||||||||||| |||||| |||||    
T  2984474 aaaaaataaaaaataattaatgatggtgggacccatttagtgatagga 2984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 402
Target Start/End: Original strand, 3057375 - 3057454
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtagga 402  Q
    |||| ||||||||||  |||| ||||  |||||||||||| || ||||||||||||| ||| || ||||| |||||||||    
T  3057375 attttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaactcactttgtggtagga 3057454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 407
Target Start/End: Complemental strand, 10362097 - 10362046
Alignment:
Q  356 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||||||||| ||||||||||| |||| |||||||||| |||||||| ||||    
T  10362097 aaaagtaaaaaataattaatgacggtgagacccacttaatggtaggatccac 10362046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 368 - 407
Target Start/End: Original strand, 29340999 - 29341038
Alignment:
Q  368 taattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccac 29341038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 358 - 409
Target Start/End: Original strand, 41660100 - 41660151
Alignment:
Q  358 aagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||| |||||||||||||||||||||||| ||||| |  |||||||||    
T  41660100 aagtaaaaaataattaatgatggtgggacccacctagtgatgagacccacca 41660151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 11960674 - 11960620
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||||| ||||||| |||||||||| |  |||||||||    
T  11960674 aaaaagtaaaaaataattaatgaaggtgggatccacttagtgattagacccacca 11960620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 16500484 - 16500549
Alignment:
Q  297 catttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagta 362  Q
    ||||||||| | ||| ||||||||| |||||||||||||| | |||| ||||  ||||||||||||    
T  16500484 catttatgttcctctccatttctttcatttggagagataagaacacaaaaaagtttgaaaaaagta 16500549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 40162737 - 40162774
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40162737 taatgatggtgggatccacttagtgataggacccacca 40162774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 308 - 352
Target Start/End: Original strand, 30355212 - 30355256
Alignment:
Q  308 ttcttcatttctttaatttggagagataaaagcacataaaatctt 352  Q
    ||||| ||||||||||||||||||||||||  |||| ||||||||    
T  30355212 ttctttatttctttaatttggagagataaagacacaaaaaatctt 30355256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 30426827 - 30426698
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| || | |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  30426827 gggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 30426728  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  30426727 tgggacccacttagtggtaggacccaccat 30426698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 280 - 407
Target Start/End: Original strand, 41511178 - 41511305
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||||||||||||||||||| || | |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41511178 agggttaggatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatg 41511277  T
Q  380 gtgggacccacttagtggtaggacccac 407  Q
    |||| | |||||||||| ||||||||||    
T  41511278 gtggaaaccacttagtgataggacccac 41511305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 36991273 - 36991398
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||    
T  36991273 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatgg 36991372  T
Q  381 tgggacccacttagtggtaggaccca 406  Q
    ||||||||||||||||||||||||||    
T  36991373 tgggacccacttagtggtaggaccca 36991398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 28069634 - 28069765
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    |||||| | ||||||||||||||||||| || |  |||||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  28069634 tagggtgaagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 28069733  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||||    
T  28069734 ggtgggacccacttagtggtaggacccaccat 28069765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 10652776 - 10652646
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttg-aaaaaagt-aaaatataattaatgat 378  Q
    |||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||| |||||||||||||||||    
T  10652776 gggttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaaa-cacataaaattttgaaaaaaagtaaaaatataattaatgat 10652678  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||| ||||| ||| ||||||||||    
T  10652677 ggtgggacccaattagtagtatgacccaccat 10652646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 28319060 - 28318934
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||  |||||||||| ||| |||| |||||||| |||||||||||| |||  |||||||||| || |||||||||||||||||||||||||||    
T  28319060 gggttaggattttctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatgg 28318961  T
Q  381 tgggacccacttagtggtaggacccac 407  Q
    | |||||||||||||||||||||||||    
T  28318960 ttggacccacttagtggtaggacccac 28318934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 10672670 - 10672541
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||| ||||||| |||||||||| |||||||||| || |||||||||||||||||  ||||||||| || ||||  |||||||||||||||||||||    
T  10672670 gggttagtatcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatgg 10672571  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||| ||||||||||||||| |||||||    
T  10672570 tgggactcacttagtggtaggatccaccat 10672541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 287 - 410
Target Start/End: Original strand, 24101939 - 24102062
Alignment:
Q  287 ggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 386  Q
    |||||||||||||||||||| || |  |||| |||||||||||||||||||  ||| |||||||||||||||| | ||||||||||||||||||||| ||    
T  24101939 ggatcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaac 24102038  T
Q  387 ccacttagtggtaggacccaccat 410  Q
     ||||||||||||||| |||||||    
T  24102039 tcacttagtggtaggatccaccat 24102062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 282 - 410
Target Start/End: Complemental strand, 40695404 - 40695276
Alignment:
Q  282 ggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggt 381  Q
    ||||||||||||| | ||||||||  || | |||||||| ||||||||| ||||||   |||||||||||||||||||||||||||||| ||||||||||    
T  40695404 ggttaggatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggt 40695305  T
Q  382 gggacccacttagtggtaggacccaccat 410  Q
    || || ||||||||||||||||| |||||    
T  40695304 ggaactcacttagtggtaggacctaccat 40695276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 44859324 - 44859196
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||| |||||||||| ||| || | | |||||||||||||||||||||||  ||| | |||| ||  ||||| ||||||||||||||||||||    
T  44859324 gggttaggatc-tctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatgg 44859226  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||| |||||||||    
T  44859225 tgggacccacttagtggtagaacccaccat 44859196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 8412179 - 8412294
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    |||||||||||||||||  |||||||||| ||  |||| ||||||||||  |||||||||| |||||||||||||||||||||||| ||||||| || |     
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatct 8412278  T
Q  389 acttagtggtaggacc 404  Q
    ||||||||||||||||    
T  8412279 acttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 410
Target Start/End: Original strand, 45113195 - 45113316
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||||| | ||||||||||| |   ||||||||||||| |  |||||||||| ||||||||| ||||| ||||||||||||| |||||| |    
T  45113195 atcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatgatgggacac 45113294  T
Q  389 acttagtggtaggacccaccat 410  Q
    |||||||||| |||||||||||    
T  45113295 acttagtggttggacccaccat 45113316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 12177724 - 12177613
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    |||||||||||||||||| ||||||||| |||| |||||||| |||||  ||||||||   ||  |||||||||||||||| |||||||||| |||||||    
T  12177724 tagggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgat 12177625  T
Q  379 ggtgggacccac 390  Q
    ||||||| ||||    
T  12177624 ggtgggatccac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 279 - 390
Target Start/End: Complemental strand, 12422152 - 12422041
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    |||||||||||||||||| ||||||||| |||| |||||||| |||||  ||||||||   ||  |||||||||||||||| |||||||||| |||||||    
T  12422152 tagggttaggatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgat 12422053  T
Q  379 ggtgggacccac 390  Q
    ||||||| ||||    
T  12422052 ggtgggatccac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 27490162 - 27490038
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| |||| |||||||||||||  ||||  |||||||  ||||| ||||| ||||  ||||||||||||||||||||||||||||||||||||||  |     
T  27490162 gttaagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatattt 27490063  T
Q  383 ggacccacttagtggtaggacccac 407  Q
     ||| ||||||||| ||||| ||||    
T  27490062 agactcacttagtgataggatccac 27490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 406
Target Start/End: Complemental strand, 26749632 - 26749581
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 406  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  26749632 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggaccca 26749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 1937239 - 1937185
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  1937239 aaaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacccacca 1937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 5033023 - 5033091
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaat 349  Q
    |||||| |||||||||||||||| || |||| |||||||| ||||||||||||||||  ||||||||||    
T  5033023 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 298 - 376
Target Start/End: Complemental strand, 37966583 - 37966505
Alignment:
Q  298 atttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatg 376  Q
    ||||||||  |||| ||||||||| |||||||||||||||   ||||||||  || |||||||||||||||||||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatg 37966505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 355 - 396
Target Start/End: Original strand, 30796269 - 30796310
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtg 396  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  30796269 aaaaagtaaaaaataattaatgatggtgggacccacttagtg 30796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 362 - 409
Target Start/End: Original strand, 34612562 - 34612609
Alignment:
Q  362 aaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  34612562 aaaaaataattaatgatggtgagacccacttagtgataggacccacca 34612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 405
Target Start/End: Complemental strand, 36748617 - 36748525
Alignment:
Q  309 tcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    ||||| ||||||  |||||||||||||||  |||| | || |||||||||  |||||||  |||||||||||||||| ||||||| |||||||||||    
T  36748617 tcttcttttcttccatttggagagataaagacacagagaagcttgaaaaa--taaaata--attaatgatggtgggatccacttaatggtaggaccc 36748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 406
Target Start/End: Complemental strand, 24557266 - 24557214
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 406  Q
    ||||||||||||  |||||||||||| |||||| |||||| ||||||||||||    
T  24557266 aaaaaagtaaaaagtaattaatgatgatgggactcacttaatggtaggaccca 24557214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 404
Target Start/End: Original strand, 6014127 - 6014234
Alignment:
Q  297 catttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtg 396  Q
    ||||||||| |||||| ||||||   |||||||||| || |  |||| ||| | || |||||||||||| ||||||||||||  | ||| ||||||| ||    
T  6014127 catttatgtccttctttatttctaccatttggagaggtatagacacacaaagttttcaaaaaagtaaaacataattaatgataataggatccacttaatg 6014226  T
Q  397 gtaggacc 404  Q
    ||||||||    
T  6014227 gtaggacc 6014234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 3763606 - 3763552
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||   ||||||||| ||||| ||||||||| |||||||||||||||    
T  3763606 aaaaagtaaaaagcaattaatgacggtggaacccacttaatggtaggacccacca 3763552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 17867727 - 17867690
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccacca 17867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 355 - 388
Target Start/End: Original strand, 24241672 - 24241705
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||| ||||||||||||||||||||||    
T  24241672 aaaaagtaaaaaataattaatgatggtgggaccc 24241705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 39143443 - 39143508
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaa 348  Q
    ||||||||||||| |||| ||||  |||| ||||||||| |||||||||| ||||| |||| ||||    
T  39143443 gttaggatcctcttcattaatgtttttctccatttcttttatttggagaggtaaaaacacaaaaaa 39143508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 16999758 - 16999806
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaa 337  Q
    ||||||||||||||| ||| |||| ||||||||  ||||||||||||||    
T  16999758 atcctctccatttatatgcatctttatttctttcttttggagagataaa 16999806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 42761704 - 42761756
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||| ||||| ||||||||||||| ||| ||||||| |||||||||| ||||    
T  42761704 aaaaattaaaaaataattaatgatgatggaacccactgagtggtaggatccac 42761756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 1e-51; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 280 - 407
Target Start/End: Complemental strand, 12241567 - 12241440
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    |||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  12241567 agggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12241468  T
Q  380 gtgggacccacttagtggtaggacccac 407  Q
    ||||||||||||||||||||||||||||    
T  12241467 gtgggacccacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 280 - 410
Target Start/End: Complemental strand, 5763321 - 5763191
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    |||||||||||| ||||||||||| || |||| |||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||    
T  5763321 agggttaggatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatg 5763222  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||||||||||||    
T  5763221 gtgggacccacttagtggtaggacccaccat 5763191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 19902076 - 19901947
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||||||||||||| ||||  ||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  19902076 gggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 19901977  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  19901976 tgggacccacttagtggtaggacccaccat 19901947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 34778338 - 34778467
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||| |||||||||||||||||| |||| |||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  34778338 gggttagaatcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 34778437  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||| |||||||    
T  34778438 tgggacccacttagtggtaggatccaccat 34778467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 279 - 410
Target Start/End: Original strand, 56558194 - 56558325
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    ||||||||||||||||||||||||| || ||||  ||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||    
T  56558194 tagggttaggatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 56558293  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||| |||||||||||||    
T  56558294 ggtgggacccacttagtgataggacccaccat 56558325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 280 - 410
Target Start/End: Complemental strand, 18207199 - 18207069
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||||||||||||||||||| ||||  ||||||| |||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  18207199 agggttaggatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatg 18207100  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
     ||||||||||||||||||||||||||||||    
T  18207099 atgggacccacttagtggtaggacccaccat 18207069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 280 - 390
Target Start/End: Original strand, 12153087 - 12153197
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  12153087 agggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatg 12153186  T
Q  380 gtgggacccac 390  Q
    |||||||||||    
T  12153187 gtgggacccac 12153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 23610559 - 23610688
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| |||||||||||||||| || |||| |||||||| ||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||    
T  23610559 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatgg 23610658  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||| ||||||||||    
T  23610659 tgggacccacttagtggtatgacccaccat 23610688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 300 - 410
Target Start/End: Complemental strand, 3952309 - 3952199
Alignment:
Q  300 ttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggta 399  Q
    ||||||| |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  400 ggacccaccat 410  Q
    |||||||||||    
T  3952209 ggacccaccat 3952199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 33247286 - 33247159
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||  ||||||| ||||||||||||||||||||    
T  33247286 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatgg 33247189  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||| ||||| |||||||||| |||||||||    
T  33247188 tggaacccatttagtggtagaacccaccat 33247159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 288 - 410
Target Start/End: Complemental strand, 38079871 - 38079749
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||| | |||| ||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| | |    
T  38079871 gatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaatc 38079772  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||| ||||||||||||||    
T  38079771 cacttagtagtaggacccaccat 38079749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 5416625 - 5416497
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaa--gtaaaatataattaatgat 378  Q
    ||||||| |||||||| ||||||||| |||| |||||||| |||||||| |||||||  ||||||||||||| ||||||  |||||||||||||||||||    
T  5416625 gggttagaatcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgat 5416526  T
Q  379 ggtgggacccacttagtggtaggacccac 407  Q
    |||||||||||||||||||||||||||||    
T  5416525 ggtgggacccacttagtggtaggacccac 5416497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 52018699 - 52018795
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatg 376  Q
    ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  52018699 agggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 24073541 - 24073662
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| ||||  |||||||  |||||||||||| || |||||||||||||||||||||  || |||||||||||||||| ||||||    
T  24073541 gatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaaaaaa-aaatatataattaatgatggcgggacc 24073639  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||||    
T  24073640 cacttagtggtaggacccaccat 24073662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 47922233 - 47922107
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||| ||||||||| |||| |||||||| ||||| ||||||||||  ||| |||||| ||||||||| ||||||||| ||||||||||    
T  47922233 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatgg 47922134  T
Q  381 tgggacccacttagtggtaggacccac 407  Q
    ||| ||||||||||||||| |||||||    
T  47922133 tggaacccacttagtggtaagacccac 47922107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 39862434 - 39862563
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||| |||||||||| ||||   |||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  39862434 gggttaggatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgg 39862533  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||| || || |||||| |||||| ||||||    
T  39862534 tggaactcatttagtgataggacacaccat 39862563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 292 - 410
Target Start/End: Complemental strand, 33262699 - 33262581
Alignment:
Q  292 ctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 391  Q
    ||||||||||||||  || |  ||||||| ||||||||||||||||  |||||||||| || |||||||||||||||||||||||||||||||||| | |    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatt 33262600  T
Q  392 tagtggtaggacccaccat 410  Q
    ||||||||||| |||||||    
T  33262599 tagtggtaggatccaccat 33262581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 281 - 382
Target Start/End: Complemental strand, 17080798 - 17080697
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||  || ||||||||||| ||||||||||||||||| ||||||||    
T  17080798 gggttaggatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatgg 17080699  T
Q  381 tg 382  Q
    ||    
T  17080698 tg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 30567859 - 30567947
Alignment:
Q  322 aatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||| || |||||||  |||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  30567859 aattttgatagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccat 30567947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 406
Target Start/End: Original strand, 3326435 - 3326559
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaag-cacataaaatcttgaaaaaagtaaaatataattaatgatggt 381  Q
    |||| |||||||||||||||||| || || |||||||||||||| |||||||||||| || | ||| | ||||||||||||||| ||||||||| |||||    
T  3326435 gttaagatcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggt 3326534  T
Q  382 gggacccacttagtggtaggaccca 406  Q
    || ||||| ||| ||||| ||||||    
T  3326535 ggaacccatttaatggtatgaccca 3326559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 31862370 - 31862249
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    |||||||| |||||| | |||||  ||||||   ||||||||||||| |  |||| ||||| ||  ||||||||||| ||||||||||||||||||||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggaccc 31862271  T
Q  389 acttagtggtaggacccaccat 410  Q
    |||||||||||||| |||||||    
T  31862270 acttagtggtaggatccaccat 31862249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 410
Target Start/End: Complemental strand, 12312572 - 12312505
Alignment:
Q  343 ataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||| |||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccat 12312505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 292 - 371
Target Start/End: Complemental strand, 12312650 - 12312571
Alignment:
Q  292 ctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataat 371  Q
    ||||||||||||||| |||| |||||||| ||||| ||||||||||  |||||||||| |||||||||||||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataat 12312571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 25442331 - 25442206
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggt 381  Q
    |||| |||||||||||||||||  ||||| ||||||||  |||||||||||||||  |||| | |||  | ||||||| ||||| ||||||||||  |||    
T  25442331 gttaagatcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggt 25442232  T
Q  382 gggacccacttagtggtaggacccac 407  Q
    | || |||||||||||||||||||||    
T  25442231 gagatccacttagtggtaggacccac 25442206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 47922517 - 47922396
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||||| |  || | |||||||   ||||| || |||| || |||| ||| | ||||||||||||||| |||||||  |||| ||||||||    
T  47922517 atcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatgatgggaccc 47922418  T
Q  389 acttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||    
T  47922417 acttagtggtaggacccaccat 47922396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 362 - 409
Target Start/End: Complemental strand, 56269153 - 56269106
Alignment:
Q  362 aaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  56269153 aaaaaataattaatgatggtgggacccacttagtggtaggacccacca 56269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 5524438 - 5524492
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||||||||||||||||||||| || ||||||||||||    
T  5524438 aaaaagtaaaaaataattaatgatggtgggacccacttactgataggacccacca 5524492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 48084609 - 48084555
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||    
T  48084609 aaaaagtaaaaaataattaatgatggtgggacccacttagtgctagaacccacca 48084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 37002335 - 37002281
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||    
T  37002335 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggatccacca 37002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 42010108 - 42010158
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  42010108 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggaccc 42010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 43447704 - 43447638
Alignment:
Q  316 ttctttaatttggagagataaaagcacataaaa-tcttgaaaaaagtaaaatataattaatgatggt 381  Q
    |||||| |||| ||||||||||  ||||||||| | |||||||||||||||||||||||||||||||    
T  43447704 ttcttttatttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 56453904 - 56453850
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||| ||||||||||||||||||||| || ||||||||||||    
T  56453904 aaaaagtaaaaaataatgaatgatggtgggacccacttaatgataggacccacca 56453850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 389
Target Start/End: Complemental strand, 33841920 - 33841854
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccca 389  Q
    ||||||| |||||||  |||| ||||||||||||| |||| |  |||||||||||||||||||||||    
T  33841920 atttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 407
Target Start/End: Original strand, 1871228 - 1871320
Alignment:
Q  314 atttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||| ||| |||||||||||||||  |||| | ||  ||||||||| || || ||||||||||||| ||||||||||||||| |||||| ||||    
T  1871228 attttttttatttggagagataaagacacaaagaaatttgaaaaaa-tataaaataattaatgatgatgggacccacttagtagtaggatccac 1871320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 26428574 - 26428650
Alignment:
Q  295 tccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataat 371  Q
    ||||||||||| ||||| |||||||  |||||||||||||| |  |||| ||| | ||||||||||||||| |||||    
T  26428574 tccatttatgtccttctccatttctacaatttggagagatatagacacacaaatttttgaaaaaagtaaaaaataat 26428650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 367 - 403
Target Start/End: Complemental strand, 36688260 - 36688224
Alignment:
Q  367 ataattaatgatggtgggacccacttagtggtaggac 403  Q
    |||||||||||||||||||||||||||||| ||||||    
T  36688260 ataattaatgatggtgggacccacttagtgataggac 36688224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 410
Target Start/End: Original strand, 23474070 - 23474157
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||| || |||| ||||  || |||||| |||||  ||||||||||||||||||  |||| | | ||||||||||||||    
T  23474070 atttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccat 23474157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 390
Target Start/End: Original strand, 47834572 - 47834607
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccac 390  Q
    ||||||||||| ||||||||||||||||||||||||    
T  47834572 aaaaagtaaaaaataattaatgatggtgggacccac 47834607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 356 - 390
Target Start/End: Original strand, 5361435 - 5361469
Alignment:
Q  356 aaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||||| ||||||||||||||||||||||||    
T  5361435 aaaagtaaaaaataattaatgatggtgggacccac 5361469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 46804621 - 46804671
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacc 404  Q
    ||||||||||||  ||||||||||| || ||||||||||| ||||||||||    
T  46804621 aaaaaagtaaaaagtaattaatgatagttggacccacttaatggtaggacc 46804671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 25219003 - 25219040
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccacca 25219040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 32146510 - 32146547
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccacca 32146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 46238974 - 46239011
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccacca 46239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 53526096 - 53526133
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccacca 53526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 55160438 - 55160401
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccacca 55160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 4404281 - 4404333
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||||||||||  ||||||||||||||| ||| |||||| || ||||||||||    
T  4404281 aaaaagtaaaaattaattaatgatggtgagacacacttaatgataggacccac 4404333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 367 - 407
Target Start/End: Complemental strand, 52030766 - 52030726
Alignment:
Q  367 ataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||||||||||||||||||| | |||||| ||||    
T  52030766 ataattaatgatggtgggacccacttatttgtaggatccac 52030726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 207980 - 208109
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||     
T  207980 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatga 208079  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  208080 tgggacccacttagtggtaggacccaccat 208109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 1249304 - 1249175
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||||||||||||| |||| |||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  1249304 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1249205  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  1249204 tgggacccacttagtggtaggacccaccat 1249175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 4804365 - 4804494
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  4804365 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 4804464  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  4804465 tgggacccacttagtggtaggacccaccat 4804494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 7162001 - 7162130
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||| ||||| ||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  7162001 gggttaggatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 7162100  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||| ||||||||||||||    
T  7162101 tgggacccacttagtagtaggacccaccat 7162130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 29698080 - 29698209
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  29698080 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 29698179  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||| |||||||| |||||||    
T  29698180 tgggacccacttaatggtaggatccaccat 29698209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 21159523 - 21159398
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||||| ||||||||    | |||||||| |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||    
T  21159523 gggttaggatcctctccgtttatgtg----tccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 21159428  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  21159427 tgggacccacttagtggtaggacccaccat 21159398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 17944106 - 17944208
Alignment:
Q  308 ttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  17944106 ttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggacctac 17944205  T
Q  408 cat 410  Q
    |||    
T  17944206 cat 17944208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 12412586 - 12412683
Alignment:
Q  313 catttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12412586 catttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccat 12412683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 32737791 - 32737900
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||||||||||| || |||| |||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  32737791 gggttaggatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 32737890  T
Q  381 tgggacccac 390  Q
    ||| ||||||    
T  32737891 tggaacccac 32737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 27826462 - 27826584
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| ||||  |||||||  |||| ||||||||||  |||||||||  ||  ||||| |||||||||||||||||||||||||||    
T  27826462 gatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatggtgggacc 27826561  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||||||||||||||||||    
T  27826562 cacttagtggtaggacccaccat 27826584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 13089899 - 13089778
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttctt-catttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||||||| |||||||||| ||||| |||||||| |||||         ||| |||||||||| ||||||||| |||||||||||||||||||    
T  13089899 gggttaggatcctcttcatttatgtgtttctttcatttcttcaattt---------aaaacacataaaattttgaaaaaaataaaatataattaatgatg 13089809  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    ||||| |||||||||||||||||||||||||    
T  13089808 gtggggcccacttagtggtaggacccaccat 13089778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 227714 - 227593
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||| ||||||||||||||| |||||||  |||||||||||||| |  |||| ||| | |||||||| |||||| ||||| ||||||| ||||| ||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatcc 227615  T
Q  389 acttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||    
T  227614 acttagtggtaggacccaccat 227593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 402
Target Start/End: Original strand, 30460764 - 30460858
Alignment:
Q  308 ttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtagga 402  Q
    |||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||| | || ||||| || ||| ||||||||    
T  30460764 ttcttcatttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtagga 30460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 1518405 - 1518327
Alignment:
Q  312 tcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||||| ||||| | |||||||  |||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  1518405 tcatttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 24484870 - 24484924
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  24484870 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccacca 24484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 314 - 390
Target Start/End: Complemental strand, 1516314 - 1516238
Alignment:
Q  314 atttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||| ||||| | |||||||  |||||||||| || |||||||||||||||||||||||||||||||| ||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 2800727 - 2800651
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggta 399  Q
    ||||||||||||| || | || ||||  ||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  2800727 atttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggta 2800651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 7215936 - 7215884
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||||||||||  ||||||||||| |||||||||| |||||||||||||||||    
T  7215936 aaaaagtaaaacgtaattaatgatagtgggacccaattagtggtaggacccac 7215884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 402
Target Start/End: Original strand, 2720376 - 2720411
Alignment:
Q  367 ataattaatgatggtgggacccacttagtggtagga 402  Q
    ||||||||||||||||||||||||||||||||||||    
T  2720376 ataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 359 - 410
Target Start/End: Complemental strand, 13888603 - 13888552
Alignment:
Q  359 agtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||| ||||||||||||| ||||||||| ||| |||||||| |||||||    
T  13888603 agtaaaaaataattaatgatgatgggacccagttaatggtaggaaccaccat 13888552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 2142377 - 2142323
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||||||||||| |||||| || || | ||||||||||    
T  2142377 aaaaagtaaaaaataattaatgatggtggaacccacctaatgatgggacccacca 2142323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 335
Target Start/End: Complemental strand, 13888663 - 13888617
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagata 335  Q
    ||||||||||||||||| |||||||||||||   |||||||||||||    
T  13888663 atcctctccatttatgtccttcttcatttctaccatttggagagata 13888617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 32254115 - 32254061
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||| ||||| |||||||||||| ||||||| |||||| || ||||||||||||    
T  32254115 aaaaaataaaaaataattaatgatagtgggactcacttaatgataggacccacca 32254061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 7098263 - 7098226
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccacca 7098226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 390
Target Start/End: Complemental strand, 1515609 - 1515573
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||||||||||||||||||| ||||||| ||||    
T  1515609 aaaaaagtaaaatataattaatgacggtgggatccac 1515573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 395
Target Start/End: Complemental strand, 11180512 - 11180472
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagt 395  Q
    ||||||||||| ||||||||||||||||| | |||||||||    
T  11180512 aaaaagtaaaaaataattaatgatggtggaatccacttagt 11180472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 17398810 - 17398774
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaa 359  Q
    |||||||||||||||  ||||||||||||||||||||    
T  17398810 atttggagagataaagacacataaaatcttgaaaaaa 17398774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 12381068 - 12380939
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  12381068 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12380969  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||| ||||||||||||| |||||||||    
T  12380968 tgggactcacttagtggtagaacccaccat 12380939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 12385135 - 12385006
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  12385135 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12385036  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||| ||||||||||||| |||||||||    
T  12385035 tgggactcacttagtggtagaacccaccat 12385006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 50484303 - 50484432
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||    
T  50484303 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacgg 50484402  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||||||| | |||||||||    
T  50484403 tgggacccacttagtggttgtacccaccat 50484432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 281 - 407
Target Start/End: Original strand, 12151684 - 12151810
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||| ||||||||||| |||| ||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  12151684 gggttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12151783  T
Q  381 tgggacccacttagtggtaggacccac 407  Q
    |||||||||||||||||||||||||||    
T  12151784 tgggacccacttagtggtaggacccac 12151810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 40328193 - 40328324
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaag-cacataaaatcttg-aaaaaagtaaaatataattaatgat 378  Q
    |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  40328193 gggttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgat 40328292  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    ||||| |||||||||||||| |||||||||||    
T  40328293 ggtggaacccacttagtggtgggacccaccat 40328324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 45977939 - 45978048
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||| ||||     
T  45977939 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgatgc 45978038  T
Q  381 tgggacccac 390  Q
    ||||||||||    
T  45978039 tgggacccac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 291 - 410
Target Start/End: Complemental strand, 50294211 - 50294092
Alignment:
Q  291 cctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||||||| ||| ||||  |||||||  |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||| ||||    
T  50294211 cctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtaggatccac 50294112  T
Q  391 ttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||    
T  50294111 ttagtggtaggacccaccat 50294092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 281 - 386
Target Start/End: Complemental strand, 7841868 - 7841763
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||| |||||||||||| || || | |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  7841868 gggttaggattctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 7841769  T
Q  381 tgggac 386  Q
    ||||||    
T  7841768 tgggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 279 - 402
Target Start/End: Complemental strand, 23862116 - 23861992
Alignment:
Q  279 tagggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatga 377  Q
    ||||||||| ||||||| |||| ||||| ||||  ||||||| |||||||| |||||||  ||||||||||||||||||||  |||||||||||||||||    
T  23862116 tagggttagaatcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatga 23862017  T
Q  378 tggtgggacccacttagtggtagga 402  Q
    |||||||| ||||||||||||||||    
T  23862016 tggtgggatccacttagtggtagga 23861992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 48327312 - 48327183
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaa-aaaagtaaaatataattaatgatg 379  Q
    |||||| ||||||||||||||||||| || |  |||||||  ||||||||| ||||| | ||||||||||||||| |||| |||||||||||||||||||    
T  48327312 gggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatg 48327213  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    || ||||||||||||||||||||| ||||||    
T  48327212 gt-ggacccacttagtggtaggactcaccat 48327183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 2845189 - 2845289
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttcttt-aatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 386  Q
    ||||||||||||||||||  ||||  |||||| | ||||||||||||||||  |||| ||||| ||||||| ||||||||||||||||||||||||||||    
T  2845189 gatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtgggac 2845288  T
Q  387 c 387  Q
    |    
T  2845289 c 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 18976452 - 18976334
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||||||| |||||||||||||   ||||||||||||| ||  ||| ||||| ||||||||| ||||| ||||||||||||| |||||||     
T  18976452 atcctctccatttatgtccttcttcatttctaccatttggagagatataa--acacaaaattttgaaaaaaataaaa-ataattaatgatgatgggacct 18976356  T
Q  389 acttagtggtaggacccaccat 410  Q
    ||||| |||| ||| |||||||    
T  18976355 acttaatggttggatccaccat 18976334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 288 - 407
Target Start/End: Complemental strand, 46608523 - 46608409
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    |||||||||||||||||| || |   |||||||  ||||||||| |||||  ||||  || | ||||||||||||||| |||||||||||||||||| ||    
T  46608523 gatcctctccatttatgtcctcc---atttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggtcc 46608429  T
Q  388 cacttagtggtaggacccac 407  Q
    ||||||||||||||||||||    
T  46608428 cacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 23916013 - 23916124
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||| | |  |||| ||||| ||| ||||||||| |||||| |||| ||||| |||||||||||  || ||||||||||||||||||||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggaccc 23916110  T
Q  389 acttagtggtagga 402  Q
    || |||||||||||    
T  23916111 acgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 402
Target Start/End: Complemental strand, 5047536 - 5047418
Alignment:
Q  283 gttaggatcctctccatttatgtgct-tcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggt 381  Q
    |||| |||||||||||||||| | || ||| ||||||||  |||| |||||||||| ||||| ||||  ||||||||| || || |||||||||||||||    
T  5047536 gttaagatcctctccatttat-tactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaaaaaa-tataaaataattaatgatggt 5047439  T
Q  382 gggacccacttagtggtagga 402  Q
    ||||||||| |||||||||||    
T  5047438 gggacccacatagtggtagga 5047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 24977189 - 24977286
Alignment:
Q  313 catttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||  |||| ||||||||||  || |||||||||||||||||  |||||||||| ||||||| |||| |||||||||||||||||| |||||||    
T  24977189 catttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatccaccat 24977286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 52280123 - 52280069
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  52280123 aaaaagtaaaaaataattaatgatggtgggatccacttagtgataggacccacca 52280069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 39426201 - 39426253
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||||||    
T  39426201 aaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccac 39426253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 35977883 - 35977930
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttgg 328  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||    
T  35977883 gggttaggatcctctccatttatgtgtttattcatttctttaatttgg 35977930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 355 - 402
Target Start/End: Original strand, 26372243 - 26372290
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtagga 402  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  26372243 aaaaagtaaaaaataattaatggtggtgggacccacttaatggtagga 26372290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 30077728 - 30077674
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| ||| ||||||||    
T  30077728 aaaaagtaaaaaataattaatgatagtgggactcacttagtgatagaacccacca 30077674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 407
Target Start/End: Complemental strand, 32887906 - 32887812
Alignment:
Q  313 catttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||| ||||||||||||| |  | || ||||  ||||||||| |  || ||||||||||||||||||||||| ||| |||||||| ||||    
T  32887906 catttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccac 32887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 407
Target Start/End: Original strand, 44483687 - 44483810
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggt 381  Q
    ||||||||| || |||||||||  ||||| ||||||||  ||||| |||||||||  |||| ||  | |||||||||  ||||| |||||||||||||||    
T  44483687 gttaggatcttccccatttatgaccttctccatttcttgcatttgaagagataaagacacacaa--ttttgaaaaaaaataaaaaataattaatgatggt 44483784  T
Q  382 gggacccacttagtggtaggacccac 407  Q
    || | ||| ||| |||||||||||||    
T  44483785 ggaatccatttaatggtaggacccac 44483810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 348
Target Start/End: Original strand, 10646833 - 10646898
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaa 348  Q
    |||| ||| ||||||||||||||  || ||||||| ||||||||| |||||||||| |||||||||    
T  10646833 gttaagattctctccatttatgtcttttttcatttgtttaatttgaagagataaaaacacataaaa 10646898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 404
Target Start/End: Complemental strand, 26860134 - 26860085
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacc 404  Q
    ||||||||||| |||||||||||| |||||| |||||||||| |||||||    
T  26860134 aaaaagtaaaaaataattaatgattgtgggatccacttagtgataggacc 26860085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 314 - 379
Target Start/End: Original strand, 45970796 - 45970861
Alignment:
Q  314 atttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    |||| ||| ||||| |||||||||  |||| ||||| ||||||||||||||| |||||||||||||    
T  45970796 atttttttcatttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 351 - 402
Target Start/End: Original strand, 7844975 - 7845026
Alignment:
Q  351 ttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtagga 402  Q
    |||||||||||| ||  |||||||| |||||||||| |||||||||||||||    
T  7844975 ttgaaaaaagtataaactaattaataatggtgggacacacttagtggtagga 7845026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 396
Target Start/End: Original strand, 19910511 - 19910583
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggtgggacccacttagtg 396  Q
    |||||||||||||||  |||||||||| |||||||||  ||||||||||||||| |||||  ||||||| |||||    
T  19910511 atttggagagataaa--cacataaaattttgaaaaaaaataaaatataattaataatggtatgacccacctagtg 19910583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 367 - 410
Target Start/End: Complemental strand, 24413354 - 24413311
Alignment:
Q  367 ataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||| ||| || |||||||||||||    
T  24413354 ataattaatgatggtgggacccatttaatgataggacccaccat 24413311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 26768886 - 26768940
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||| ||| |||||| || ||| ||||||||    
T  26768886 aaaaagtaaaaaataattaatgatggtgagactcacttaatgatagaacccacca 26768940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 6948899 - 6948862
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccacca 6948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 40988674 - 40988723
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataatt 372  Q
    |||||||||||||||  |||| ||||| ||||||||||||||| ||||||    
T  40988674 atttggagagataaagacacacaaaattttgaaaaaagtaaaaaataatt 40988723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 46045678 - 46045726
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggac 403  Q
    ||||||| ||| |||||||||||||||||||  ||||||||| ||||||    
T  46045678 aaaaagtgaaaaataattaatgatggtgggatacacttagtgataggac 46045726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 280 - 410
Target Start/End: Original strand, 35316741 - 35316871
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||||||||||||||| ||| |||| |||||||| ||||||||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  35316741 agggttaggatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatg 35316840  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||| |||||||    
T  35316841 gtgggacccacttagtggtaggatccaccat 35316871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 28564815 - 28564938
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttg-aaaaaagtaaaatataattaatgatggtgggac 386  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||  |||||||||||||||||||||||||||||||||    
T  28564815 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatggtgggac 28564914  T
Q  387 ccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||    
T  28564915 ccacttagtggtaggacccaccat 28564938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 13238605 - 13238727
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||| | ||||  ||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13238605 gatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacc 13238704  T
Q  388 cacttagtggtaggacccaccat 410  Q
    ||||| |||||||||||||||||    
T  13238705 cacttggtggtaggacccaccat 13238727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 288 - 390
Target Start/End: Original strand, 39465699 - 39465801
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| |||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39465699 gatcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 39465798  T
Q  388 cac 390  Q
    |||    
T  39465799 cac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 280 - 409
Target Start/End: Complemental strand, 23259646 - 23259517
Alignment:
Q  280 agggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    |||||||| ||| ||| |||||||  | ||||||||||||| ||||| ||| ||||||  || |||||||||| ||||||||||||||||||||||||||    
T  23259646 agggttagaatcatcttcatttatacgtttcttcatttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatg 23259547  T
Q  380 gtgggacccacttagtggtaggacccacca 409  Q
    |||||| ||||||||| |||||||||||||    
T  23259546 gtgggatccacttagtagtaggacccacca 23259517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 378
Target Start/End: Complemental strand, 41983497 - 41983401
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    |||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  41983497 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 292 - 378
Target Start/End: Complemental strand, 374585 - 374499
Alignment:
Q  292 ctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgat 378  Q
    ||||||||||||||| |||| | ||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  374585 ctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 10877619 - 10877724
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatct--tgaaaaaagtaaaatataattaatgat 378  Q
    ||||||||||||||| |||||||||| |||| |||||||| ||||||||||||||||| |||||||||| |    |||||| | ||||||||||||||||    
T  10877619 gggttaggatcctcttcatttatgtgtttctccatttcttcaatttggagagataaaa-cacataaaatttaaaaaaaaaaatgaaatataattaatgat 10877717  T
Q  379 ggtggga 385  Q
    |||||||    
T  10877718 ggtggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 45625216 - 45625111
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||||     ||||| |||| |||||||| ||||| ||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||    
T  45625216 gggttaggatcctctc----aatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatgg 45625121  T
Q  381 tgggacccac 390  Q
    ||||||||||    
T  45625120 tgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 374984 - 375038
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  374984 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccacca 375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 351 - 407
Target Start/End: Complemental strand, 21454582 - 21454526
Alignment:
Q  351 ttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccac 21454526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 354 - 406
Target Start/End: Original strand, 30709100 - 30709152
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 406  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||||    
T  30709100 aaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggaccca 30709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 369
Target Start/End: Original strand, 2061296 - 2061382
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatata 369  Q
    |||| ||||||||||||||||  |  |||  |||||||  |||||||||||||||  | ||||||||||||||||||||||||||||    
T  2061296 gttaagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 389
Target Start/End: Original strand, 12949429 - 12949494
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccca 389  Q
    |||||||||||||||   ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  12949429 atttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatgacggcgggaccca 12949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 23459930 - 23459880
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  23459930 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggaccc 23459880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 29188644 - 29188698
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||| ||||||| |||||| |||||    
T  29188644 aaaaagtaaaaaataattaatgatggtgggacccgcttagtgataggacgcacca 29188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 8988847 - 8988895
Alignment:
Q  356 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggacc 404  Q
    |||| ||||| |||||||||||||||||||||||||||||| |||||||    
T  8988847 aaaaataaaaaataattaatgatggtgggacccacttagtgataggacc 8988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 404
Target Start/End: Original strand, 2063343 - 2063393
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacc 404  Q
    ||||||||| ||||| |||||||||||||| |||||||| |||||||||||    
T  2063343 aaaaaagtataatattattaatgatggtggaacccacttggtggtaggacc 2063393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 11864856 - 11864912
Alignment:
Q  343 ataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggta 399  Q
    ||||||||||| |||||||||||||||||  ||||||||| ||| || |||||||||    
T  11864856 ataaaatcttggaaaaagtaaaatataatccatgatggtgagactcatttagtggta 11864912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 390
Target Start/End: Complemental strand, 3354847 - 3354812
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccac 390  Q
    ||||||||||| ||||||||||||||||||||||||    
T  3354847 aaaaagtaaaaaataattaatgatggtgggacccac 3354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 389
Target Start/End: Complemental strand, 4603205 - 4603159
Alignment:
Q  343 ataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccca 389  Q
    ||||||| || |||||  |||||||||||||||||||||||||||||    
T  4603205 ataaaattttaaaaaagataaaatataattaatgatggtgggaccca 4603159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 30840872 - 30840925
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| ||||||||| |||||| ||| ||||||||| ||||||||||||    
T  30840872 aaaaagtaaaaaataattaat-atggtgagactcacttagtgataggacccacca 30840925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 13780506 - 13780543
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccacca 13780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 40254217 - 40254180
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccacca 40254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 4446980 - 4446928
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||| |||||||||||| |||  ||||| |||||||||||| ||||    
T  4446980 aaaaagtaaaaaataattaatgatagtgaaacccaattagtggtaggatccac 4446928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 393
Target Start/End: Original strand, 19908777 - 19908809
Alignment:
Q  361 taaaatataattaatgatggtgggacccactta 393  Q
    ||||| |||||||||||||||||||||||||||    
T  19908777 taaaaaataattaatgatggtgggacccactta 19908809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 391
Target Start/End: Original strand, 30217477 - 30217517
Alignment:
Q  351 ttgaaaaaagtaaaatataattaatgatggtgggacccact 391  Q
    ||||||||||||||| |||||||||||| ||||||| ||||    
T  30217477 ttgaaaaaagtaaaaaataattaatgatagtgggactcact 30217517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 98; Significance: 4e-48; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 16555 - 16426
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||     
T  16555 gggttaggatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatga 16456  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  16455 tgggacccacttagtggtaggacccaccat 16426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 281 - 402
Target Start/End: Original strand, 21151069 - 21151190
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||| ||||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  21151069 gggttaggattctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 21151168  T
Q  381 tgggacccacttagtggtagga 402  Q
    ||||||||||||||||||||||    
T  21151169 tgggacccacttagtggtagga 21151190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 16366438 - 16366564
Alignment:
Q  284 ttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgg 383  Q
    |||||||| |||||||||||||| |||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  16366438 ttaggatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgg 16366537  T
Q  384 gacccacttagtggtaggacccaccat 410  Q
    ||| ||||||||||||||| |||||||    
T  16366538 gacacacttagtggtaggatccaccat 16366564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 25084886 - 25084757
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||||||||||||| |||| ||||| ||||||||| |||||||||  |||||||||| ||||||||| ||||||||||||||||||||    
T  25084886 gggttatgatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatgg 25084787  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||||||||||    
T  25084786 tgggacccacttagtggtaggacccaccat 25084757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 47226229 - 47226101
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  47226229 gttaggatcctctccatttatgtgtttctctatttcttcaatttggagagataaaa-cacataaaatcttggaaaaagtaaaatataattaatgatggtg 47226131  T
Q  383 ggacccacttagtggtaggacccaccatat 412  Q
    ||||||| |||||||| |||||||||||||    
T  47226130 ggacccatttagtggtgggacccaccatat 47226101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 12139245 - 12139373
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||    
T  12139245 gggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaa--cacataaaatcttaaaaaaagtaaaatataattaatgatgg 12139342  T
Q  381 tggga-cccacttagtggtaggacccaccat 410  Q
    ||||| |||||||| ||||||||||||||||    
T  12139343 tgggaccccacttaatggtaggacccaccat 12139373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 288 - 410
Target Start/End: Original strand, 18198180 - 18198302
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| |||| |||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||     
T  18198180 gatcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggact 18198279  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||||| || |||||||||    
T  18198280 cacttagtggcagaacccaccat 18198302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 293 - 410
Target Start/End: Original strand, 7362497 - 7362614
Alignment:
Q  293 tctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 392  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattt 7362596  T
Q  393 agtggtaggacccaccat 410  Q
    ||||||| ||||||||||    
T  7362597 agtggtacgacccaccat 7362614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 292 - 410
Target Start/End: Complemental strand, 9559201 - 9559083
Alignment:
Q  292 ctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 391  Q
    |||||||||||| || ||||  |||||||  |||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9559201 ctctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggtgggacccact 9559102  T
Q  392 tagtggtaggacccaccat 410  Q
    |||||||||||||||||||    
T  9559101 tagtggtaggacccaccat 9559083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 45260586 - 45260459
Alignment:
Q  281 gggttaggat-cctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatg 379  Q
    |||||||||| |||||| ||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  45260586 gggttaggattcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatg 45260487  T
Q  380 gtgggacccacttagtggtaggacccac 407  Q
     ||||| |||||||||||||||| ||||    
T  45260486 atgggatccacttagtggtaggatccac 45260459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 288 - 407
Target Start/End: Original strand, 4888391 - 4888510
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    |||||||| |||||||||| ||||  |||||||  |||||||||||||||  ||||||||||||| |||||  |||||||||||||||||||||||||||    
T  4888391 gatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgggacc 4888490  T
Q  388 cacttagtggtaggacccac 407  Q
     |||||||||||||||||||    
T  4888491 tacttagtggtaggacccac 4888510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 44647882 - 44648010
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||| ||||||||||||||||||| |||| |||||||| ||||||   |||||||  ||||||||||||||||||| |||||||||||||||||||||    
T  44647882 gggttatgatcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatgg 44647978  T
Q  381 tgg--gacccacttagtggtaggacccaccat 410  Q
     ||  ||||||||||||||| ||| |||||||    
T  44647979 agggagacccacttagtggtcggatccaccat 44648010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 289 - 410
Target Start/End: Original strand, 33450431 - 33450552
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||| ||||||||| ||||| |||||||   ||||||||||||| || |||| ||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  33450431 atcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 33450530  T
Q  389 acttagtggtaggacccaccat 410  Q
    |||||||||| |||||||||||    
T  33450531 acttagtggttggacccaccat 33450552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 47500433 - 47500312
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||||||| ||||| |||||||   |||| |||||||| |  |||| ||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 47500334  T
Q  389 acttagtggtaggacccaccat 410  Q
    |||||||||| |||||||||||    
T  47500333 acttagtggttggacccaccat 47500312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 407
Target Start/End: Original strand, 29630967 - 29631091
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| ||||||||||||| ||||  |||| ||||||||| ||||||||| |||||  |||||||||| ||||||||||||||  |||||||||||| |||    
T  29630967 gttaagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtg 29631066  T
Q  383 ggacccacttagtggtaggacccac 407  Q
    ||||| || ||||||| ||||||||    
T  29631067 ggacctacatagtggttggacccac 29631091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 344 - 410
Target Start/End: Complemental strand, 39855908 - 39855842
Alignment:
Q  344 taaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||    
T  39855908 taaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccat 39855842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 407
Target Start/End: Original strand, 32915883 - 32915999
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||| |||||||||| ||||| ||||||||  |||||||||||||||  |||| ||||  || ||||||   |||||||||| |||||||||||||     
T  32915883 gatcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttttaaaaaa---aaatataattcatgatggtgggact 32915979  T
Q  388 cacttagtggtaggacccac 407  Q
    |||||| |||||||||||||    
T  32915980 cacttaatggtaggacccac 32915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 323 - 395
Target Start/End: Original strand, 40019640 - 40019712
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagt 395  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  ||||||||||||||||||| || |||||    
T  40019640 atttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggactcatttagt 40019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 406
Target Start/End: Complemental strand, 47799984 - 47799933
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 406  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  47799984 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggaccca 47799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 405
Target Start/End: Original strand, 30588526 - 30588576
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  30588526 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggaccc 30588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 407
Target Start/End: Complemental strand, 19889118 - 19889066
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  19889118 aaaaagtaaaaaataattaatgatggtggaacccacttagtgataggacccac 19889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 34986095 - 34985975
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggtgggacc 387  Q
    |||||||||||||||||  |||| |||||||   ||||||||||||| |   ||||||||| |||||||||  ||||| ||||||||||||| ||||||     
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatgggact 34985998  T
Q  388 cacttagtggtaggacccaccat 410  Q
    || ||||||||  ||||||||||    
T  34985997 catttagtggtttgacccaccat 34985975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 408
Target Start/End: Complemental strand, 46802445 - 46802362
Alignment:
Q  323 atttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacc 408  Q
    |||||||||||||||| ||||  |||  ||||| |||| | || |||||||| | |||||||||||||||||||||||||||||||    
T  46802445 atttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccacc 46802362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 354 - 407
Target Start/End: Original strand, 8149599 - 8149652
Alignment:
Q  354 aaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||| |||||| ||||||||||||||||||||||||||| || || |||||||    
T  8149599 aaaaaggtaaaaaataattaatgatggtgggacccacttaatgatatgacccac 8149652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 283 - 396
Target Start/End: Complemental strand, 30153337 - 30153225
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| |||||||||||||||||  | |||||||| |||  |||||||||||||||  || | ||||  ||||||||| || || |||||||||||||||     
T  30153337 gttaagatcctctccatttatgatcatcttcatt-cttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggta 30153239  T
Q  383 ggacccacttagtg 396  Q
    | || |||||||||    
T  30153238 gtactcacttagtg 30153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 407
Target Start/End: Original strand, 32916160 - 32916212
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    ||||| ||||| ||||||||||||||||| | ||||||||||||| |||||||    
T  32916160 aaaaaataaaaaataattaatgatggtggaatccacttagtggtatgacccac 32916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 8734502 - 8734560
Alignment:
Q  345 aaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacc 404  Q
    ||||| ||||||||| ||||| ||||||||||||||| ||||||| |||||| |||||||    
T  8734502 aaaattttgaaaaaaataaaaaataattaatgatggt-ggacccatttagtgataggacc 8734560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 11828992 - 11828945
Alignment:
Q  356 aaaagtaaaatataattaatgatggtgggacccacttagtggtaggac 403  Q
    |||| ||||| ||||||||||||||||| ||||||||| |||||||||    
T  11828992 aaaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 367 - 413
Target Start/End: Original strand, 989132 - 989178
Alignment:
Q  367 ataattaatgatggtgggacccacttagtggtaggacccaccatata 413  Q
    ||||||||| ||||| ||||| ||||||||||||||||||| |||||    
T  989132 ataattaattatggttggacctacttagtggtaggacccactatata 989178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 410
Target Start/End: Complemental strand, 19027751 - 19027713
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccat 19027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 410
Target Start/End: Original strand, 20726885 - 20726923
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccaccat 410  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccat 20726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 399
Target Start/End: Complemental strand, 40023385 - 40023296
Alignment:
Q  309 tcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggta 399  Q
    ||||||||||||  |||| |||||||| || | || ||||   ||||||||| |||| |||||||||| |||||||||||||||| |||||    
T  40023385 tcttcatttcttccatttagagagatataaactcaaaaaaaaatgaaaaaagaaaaa-ataattaatggtggtgggacccacttaatggta 40023296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 4269187 - 4269224
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccacca 4269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 14696825 - 14696788
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccacca 14696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Original strand, 30102501 - 30102538
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccacca 30102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 47080433 - 47080470
Alignment:
Q  369 aattaatgatggtgggacccacttagtggtaggaccca 406  Q
    |||||||||||||||||||| ||||||| |||||||||    
T  47080433 aattaatgatggtgggacccgcttagtgataggaccca 47080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 281 - 407
Target Start/End: Complemental strand, 43720105 - 43719979
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||| |||||||||||||| |||| |||||||| ||||||||||||||||  ||||||||||||| |||||| ||||||||||||||||||||    
T  43720105 gggttaggatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatgg 43720006  T
Q  381 tgggacccacttagtggtaggacccac 407  Q
    |||||||||||||||||||||||||||    
T  43720005 tgggacccacttagtggtaggacccac 43719979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 34373750 - 34373877
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||||||||||||||||  ||||| |||||||||| || ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  34373750 gttaggatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtg 34373849  T
Q  383 ggacccacttagtggtaggacccaccat 410  Q
    ||||| | ||||||||||||||||||||    
T  34373850 ggacctaattagtggtaggacccaccat 34373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 406
Target Start/End: Original strand, 2229900 - 2230025
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    ||||||||||||||| |||||||||| ||||  ||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  2229900 gggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 2229999  T
Q  381 tgggacccacttagtggtaggaccca 406  Q
    ||| | ||||||||||||||||||||    
T  2230000 tggaaaccacttagtggtaggaccca 2230025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 293 - 410
Target Start/End: Complemental strand, 34373731 - 34373614
Alignment:
Q  293 tctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 392  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||   ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  393 agtggtaggacccaccat 410  Q
    ||||||||||||||||||    
T  34373631 agtggtaggacccaccat 34373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 308 - 410
Target Start/End: Original strand, 27033595 - 27033697
Alignment:
Q  308 ttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccac 407  Q
    |||| |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  27033595 ttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggacccac 27033694  T
Q  408 cat 410  Q
    |||    
T  27033695 cat 27033697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 40851690 - 40851820
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatat-aattaatgatg 379  Q
    |||||||||||||||||||||||||  |||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||    
T  40851690 gggttaggatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatg 40851789  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    || |||||||||||||||| | |||||||||    
T  40851790 gtaggacccacttagtggttgaacccaccat 40851820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 19830591 - 19830460
Alignment:
Q  281 gggttaggatcctctccattt-atgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgat 378  Q
    |||||| |||||||||||||| ||||| || | |||||||| ||||||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||    
T  19830591 gggttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgat 19830492  T
Q  379 ggtgggacccacttagtggtaggacccaccat 410  Q
    ||||||||||||||| ||||||||||||||||    
T  19830491 ggtgggacccacttaatggtaggacccaccat 19830460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 12402883 - 12403012
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatctt-gaaaaaagtaaaatataattaatgatg 379  Q
    ||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||||  |||||||||||||  |||||||||||||||||||||| |||    
T  12402883 gggttaggatc-tctccatttatgtgtttcttcattttcttaatttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatg 12402981  T
Q  380 gtgggacccacttagtggtaggacccaccat 410  Q
    ||||||| ||||||||||||| | |||||||    
T  12402982 gtgggactcacttagtggtagaatccaccat 12403012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 293 - 413
Target Start/End: Original strand, 46167322 - 46167442
Alignment:
Q  293 tctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 392  Q
    |||||||||||||| || | |||||||| ||||| ||||||||||  || ||| ||||||||||||||||||||||||||||| ||||| ||| ||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  393 agtggtaggacccaccatata 413  Q
    |||||||||||||||||||||    
T  46167422 agtggtaggacccaccatata 46167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 289 - 410
Target Start/End: Original strand, 48084744 - 48084865
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 388  Q
    ||||||||||||||||| ||||| |||||||   ||||||||||||| |  |||| ||||| ||||||||| ||||| ||||||||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 48084843  T
Q  389 acttagtggtaggacccaccat 410  Q
    |||||||||| |||||||||||    
T  48084844 acttagtggttggacccaccat 48084865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 550972 - 550845
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    |||| ||||||||||||||||||  |||| ||||||||  |||||||||||||||   ||||||||| || ||||||||||||||||| |||| ||||||    
T  550972 gttaagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtg 550873  T
Q  383 ggacccacttagtggtaggacccaccat 410  Q
    ||||||||||| || ||||| |||||||    
T  550872 ggacccacttaatgataggatccaccat 550845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 314 - 413
Target Start/End: Complemental strand, 566898 - 566800
Alignment:
Q  314 atttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccaccatata 413  Q
    |||||||  ||||||||||||||||  |||||||||||||||||| ||||||||||| |||| | ||||||||||||||| || ||||| || |||||||    
T  566898 atttcttccatttggagagataaaaatacataaaatcttgaaaaa-gtaaaatataaataataaaggtgggacccacttaatgataggatccgccatata 566800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 355 - 409
Target Start/End: Original strand, 42613071 - 42613125
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  42613071 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggacccacca 42613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 289 - 410
Target Start/End: Complemental strand, 40810505 - 40810385
Alignment:
Q  289 atcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaag-taaaatataattaatgatggtgggacc 387  Q
    |||||||||||||||||  || | ||||||| | ||| ||||||||| || ||||  |||| |||||||||  ||||| ||||||||||||| |||||||    
T  40810505 atcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggacc 40810408  T
Q  388 cacttagtggtaggacccaccat 410  Q
    |||||||||||  ||||||||||    
T  40810407 cacttagtggttagacccaccat 40810385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 409
Target Start/End: Complemental strand, 31523752 - 31523698
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggacccacca 409  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||    
T  31523752 aaaaagtaaaaaataattaatgatggtgggacccacttagtaataggacccacca 31523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 292 - 386
Target Start/End: Complemental strand, 52859528 - 52859433
Alignment:
Q  292 ctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaa-agtaaaatataattaatgatggtgggac 386  Q
    |||| |||||||||  |||| |||||||   ||||||||| |||||  ||||||||||||| ||||| |||||||||||||||||||| |||||||    
T  52859528 ctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtgggac 52859433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 405
Target Start/End: Complemental strand, 49679354 - 49679304
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccc 405  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  49679354 aaaaagtaaaaaataattaatgatggtgggacccatttagtgataggaccc 49679304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 1995435 - 1995483
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggac 403  Q
    ||||||||||| |||||||||||||||| ||| |||||| |||||||||    
T  1995435 aaaaagtaaaaaataattaatgatggtgagactcacttattggtaggac 1995483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 355 - 390
Target Start/End: Original strand, 27959098 - 27959133
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccac 390  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27959098 aaaaagtaaaaaataattaatgatggtgggacccac 27959133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 385
Target Start/End: Original strand, 2310235 - 2310330
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtggga 385  Q
    |||| |||||||||| |||||| || |||||||  |||| ||||||||||  ||||  |||| || || ||||||||| ||||||||||||| |||||    
T  2310235 gatcatctccatttacgtgcttatttatttcttccatttagagagataaagacaca--aaattttaaagaaagtaaaaaataattaatgatgatggga 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Original strand, 3009230 - 3009264
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggaccca 389  Q
    ||||||||||| |||||||||||||||||||||||    
T  3009230 aaaaagtaaaaaataattaatgatggtgggaccca 3009264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 359
Target Start/End: Original strand, 32577451 - 32577526
Alignment:
Q  283 gttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaa 359  Q
    ||||||||||| ||||||||    ||||| ||||||||  |||||||||||||||  |||| |||||||||||||||    
T  32577451 gttaggatcctttccatttaaactcttctccatttcttctatttggagagataaagacaca-aaaatcttgaaaaaa 32577526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 90; Significance: 2e-43; HSPs: 3)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 281 - 410
Target Start/End: Original strand, 7064 - 7193
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||  || ||||||||||||||||| ||||||||||||||||||||    
T  7064 gggttaggatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatgg 7163  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    ||| ||||||||| | ||||||||||||||    
T  7164 tggaacccacttaatagtaggacccaccat 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 177 - 277
Target Start/End: Complemental strand, 6585 - 6489
Alignment:
Q  177 attgtttttaggtgtgttgtatttcttgcttcggggatagatagtgagacaagggtatgcatttggtttccttctccatttctatactttggcctcatta 276  Q
    ||||||||| ||||||||| ||||||||||| ||||||||    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6585 attgtttttgggtgtgttgaatttcttgctttggggatag----tgaggcaagggtatgcatttggtttccttctccatttgtatactttggcctcatta 6490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 6670 - 6611
Alignment:
Q  112 tgttgtatggatggggtaggtacttggtagtttatgttatgcgctacctgggagtgcttg 171  Q
    |||||||| | |||| |||||| ||||||| |||||| ||| ||||||||||||||||||    
T  6670 tgttgtattgttgggataggtagttggtagcttatgtaatgtgctacctgggagtgcttg 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 73998 - 73889
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||| ||||| ||||||||||||||| |||| |||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||     
T  73998 gggtcaggatgctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatga 73899  T
Q  381 tgggacccac 390  Q
    ||||||||||    
T  73898 tgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 13645 - 13722
Alignment:
Q  313 catttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 390  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13645 catttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 281 - 410
Target Start/End: Complemental strand, 6585 - 6464
Alignment:
Q  281 gggttaggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatgg 380  Q
    |||||||||||||||||||||||||| |||||||        |||| ||||||||||  |||||||||||||| ||||||||||||||||||||||||||    
T  6585 gggttaggatcctctccatttatgtgtttcttca--------attttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatgg 6494  T
Q  381 tgggacccacttagtggtaggacccaccat 410  Q
    | | ||||| ||||| ||||||||||||||    
T  6493 ttgtacccatttagttgtaggacccaccat 6464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 288 - 410
Target Start/End: Complemental strand, 9349 - 9230
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    ||||||||||||||||||| ||||  |||||||  ||||||||||||||| |||||| ||||||| |||||   | |||||||||||||||||||| | |    
T  9349 gatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatcttaaaaaa---ataatataattaatgatggtggaatc 9253  T
Q  388 cacttagtggtaggacccaccat 410  Q
    ||||||||||| |||||||||||    
T  9252 cacttagtggttggacccaccat 9230  T

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Target: scaffold0126 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 288 - 407
Target Start/End: Complemental strand, 22593 - 22474
Alignment:
Q  288 gatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 387  Q
    |||| |||||||||||||   ||| ||||||||  |||| ||||||||||  |||||||||||||||||||||||||||||||||||| || |||| ||     
T  22593 gatcttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaact 22494  T
Q  388 cacttagtggtaggacccac 407  Q
    ||||||||||||||| ||||    
T  22493 cacttagtggtaggatccac 22474  T

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Target: scaffold0171 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 355 - 406
Target Start/End: Complemental strand, 17390 - 17339
Alignment:
Q  355 aaaaagtaaaatataattaatgatggtgggacccacttagtggtaggaccca 406  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  17390 aaaaagtaaaaaataattaatgatggtgggacccacttagtgataggaccca 17339  T

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Target: scaffold0468 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 285 - 386
Target Start/End: Original strand, 5531 - 5632
Alignment:
Q  285 taggatcctctccatttatgtgcttcttcatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtggg 384  Q
    ||||||||||||||||||||  | ||||||||||||  |||||||||||||||  || | | ||  |||||||||||| || ||||||||||||| ||||    
T  5531 taggatcctctccatttatgatcctcttcatttcttccatttggagagataaagacataaagaagtttgaaaaaagtataaaataattaatgatgatggg 5630  T
Q  385 ac 386  Q
    ||    
T  5631 ac 5632  T

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Target: scaffold0664 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 372 - 409
Target Start/End: Complemental strand, 4768 - 4731
Alignment:
Q  372 taatgatggtgggacccacttagtggtaggacccacca 409  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4768 taatgatggtgggatccacttagtgataggacccacca 4731  T

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Target: scaffold0252 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 10600 - 10531
Alignment:
Q  313 catttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtg 382  Q
    ||||||||| ||||| ||||||||||  ||| |||||||| ||||||||| ||  | |||||||||||||    
T  10600 catttctttcatttgtagagataaaaatacaaaaaatcttaaaaaaagtataaagttattaatgatggtg 10531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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