View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4993_high_12 (Length: 206)
Name: NF4993_high_12
Description: NF4993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4993_high_12 |
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Alignment Details
Target: chr1 (Bit Score: 156; Significance: 4e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 18 - 190
Target Start/End: Complemental strand, 51008613 - 51008437
Alignment:
| Q |
18 |
gcaatagttaactgaatcatcatcatcaaaatatttagatcatatgcatacataaaacagcttata----ccaaaaatattatctaagcaaatcaagtag |
113 |
Q |
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| T |
51008613 |
gcaatagttaactgaatcatcatcatcaaaatatttagatcatatgcatacataaaacagcttatatataccaaaaatattatctaagcaaatcaagtag |
51008514 |
T |
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| Q |
114 |
aaacaaagttgcttataccaatgaatgtcttataagcatgatgcaactaattatcacaagaatattatcttgtttat |
190 |
Q |
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| T |
51008513 |
aaacaaatttgcttataccaatgaatgtcttataagcatgatgcaactaattatcacaagaatattatcttgtttat |
51008437 |
T |
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