View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4993_high_8 (Length: 251)
Name: NF4993_high_8
Description: NF4993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4993_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 51008663 - 51008437
Alignment:
| Q |
13 |
aaaatcagtagaatttattctttatattcatacaataagcttaaataacagcaatagttaactgaatcatcatcatcaaaatatttagatcatatgcata |
112 |
Q |
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| T |
51008663 |
aaaatcagtagaatttattctttatattcatacaataagcttaaatgacagcaatagttaactgaatcatcatcatcaaaatatttagatcatatgcata |
51008564 |
T |
|
| Q |
113 |
cataaaacagct----tataccaaaaatattatctaagcaaatcaagtagaaacaaagttgcttataccaatgaatgtcttataagcatgatgcaactaa |
208 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
51008563 |
cataaaacagcttatatataccaaaaatattatctaagcaaatcaagtagaaacaaatttgcttataccaatgaatgtcttataagcatgatgcaactaa |
51008464 |
T |
|
| Q |
209 |
ttatcacaagaatattatcttgtttat |
235 |
Q |
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||||||||||||||||||||||||||| |
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| T |
51008463 |
ttatcacaagaatattatcttgtttat |
51008437 |
T |
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