View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4993_low_19 (Length: 205)
Name: NF4993_low_19
Description: NF4993
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4993_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 182; Significance: 1e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 182; E-Value: 1e-98
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 33455814 - 33455617
Alignment:
| Q |
1 |
ttctatgttgcctattagtggtggcggcggtggttgtggtggttgttgtgagtcgaagtcttgaattctcactttgtctctttgaatttgctgttgttgc |
100 |
Q |
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| T |
33455814 |
ttctatgttgcctattagtggcggcggcggtggttgtggtggttgttgtgagtcgaagtcttgaattctcactttgtctctttgaatttgctgttgttgc |
33455715 |
T |
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| Q |
101 |
tggtgtggattgctgttttctggagtgttcgatctctcgaatccgttcgagaaggcgaagattccttgctggtggtggttttggtgctggtgatgatg |
198 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |
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| T |
33455714 |
tggtgtggattgttgttttctggagtgttcgatctctcgaatccgttcgagaaggcgaagattccttgctggtggtggttctggtggtggtgatgatg |
33455617 |
T |
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