View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4995_high_6 (Length: 358)
Name: NF4995_high_6
Description: NF4995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4995_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 342
Target Start/End: Original strand, 50016690 - 50017030
Alignment:
| Q |
1 |
gaaggaaaacagagacataagtgagggtacaacaacaataagggagggtgtgaattggaattgggaggaatatatgccatggttgggaggtgttgtggat |
100 |
Q |
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| T |
50016690 |
gaaggaaaacagagacataagtgagggtacaacaacaataagggagggtgtgaattggaattgggaggaatatatgccatggttgggaggtgttgtggat |
50016789 |
T |
|
| Q |
101 |
gaacaaatgtcatggggttcaacttggttccccgggtgggatatggatttcatgggtgaagcttttaataatgctctttataatgatgttgtttgggatg |
200 |
Q |
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| T |
50016790 |
gaacaaatgtcatggggttcaacttggttccccgggtgggatatggatttcatgggtgaagcttttaataatgctctttataatgatgttgtttgggaag |
50016889 |
T |
|
| Q |
201 |
atgatatctggaatctcaaaaatcaaattccaattccattacatggaaagagatttgaattggagtagaagaggtacaagtttttcagcttcgtttagga |
300 |
Q |
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| T |
50016890 |
atgatatctggaatctcaaaaatcaaattccaattccattacatggaaagagatttgaattggagtagaagaggtacaagtttttcagcttcgtttagga |
50016989 |
T |
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| Q |
301 |
aatttcactatttttcatgtcaattttagaaatatatatgtg |
342 |
Q |
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| T |
50016990 |
aatttcacta-ttttcatgtcaattttagaaatatatatgtg |
50017030 |
T |
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