View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4995_low_9 (Length: 309)
Name: NF4995_low_9
Description: NF4995
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4995_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 12 - 292
Target Start/End: Original strand, 37604152 - 37604432
Alignment:
| Q |
12 |
atgaaagcaggggatggtccaaaagtgggtgaccagtttcttggtggaagtatggattttgatgatttagatacagatgctgacatcgatgatattgaaa |
111 |
Q |
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| T |
37604152 |
atgaaagcaggggatggtccaaaagtgggtgaccagtttcttggtggaagtatggattttgatgatttagatacagatgctgacatcgatgatattgaaa |
37604251 |
T |
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| Q |
112 |
ccagcggtgattttgtttgtgccttgtgaatgatgatgcactttgtagacaattcttccttaaaagtggttttaagataagatgtgttcttttttccatc |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604252 |
ccagcggtgattttgtttgtgccttgtgaatgatgatgcactttgtagacaattcttccttaaaagtggttttaagataagatgtgttcttttttccatc |
37604351 |
T |
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| Q |
212 |
atccttaaccatgtaaggaacaaagaggtttagttgagtgggttttgattgattttcctttcattggaagttacttgtctt |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37604352 |
atccttaaccatgtaaggaacaaagaggtttagttgagtgggttttgattgattttcctttcattggaagttacttgtctt |
37604432 |
T |
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