View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4999_high_5 (Length: 348)

Name: NF4999_high_5
Description: NF4999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4999_high_5
NF4999_high_5
[»] chr7 (38 HSPs)
chr7 (10-330)||(26264982-26265304)
chr7 (10-330)||(26325014-26325336)
chr7 (10-331)||(26696564-26696886)
chr7 (74-331)||(31081040-31081297)
chr7 (74-331)||(31092969-31093226)
chr7 (69-211)||(24892399-24892541)
chr7 (75-331)||(21541562-21541819)
chr7 (119-213)||(2771128-2771222)
chr7 (119-213)||(2783183-2783277)
chr7 (240-331)||(26430161-26430252)
chr7 (240-331)||(26445599-26445690)
chr7 (20-163)||(26498381-26498525)
chr7 (20-163)||(26599504-26599648)
chr7 (194-331)||(24582732-24582868)
chr7 (240-331)||(4135375-4135466)
chr7 (240-331)||(4150301-4150392)
chr7 (75-277)||(26660084-26660289)
chr7 (75-277)||(26675277-26675482)
chr7 (75-277)||(26685414-26685619)
chr7 (75-277)||(26688954-26689159)
chr7 (240-331)||(31119829-31119920)
chr7 (240-331)||(31134004-31134095)
chr7 (184-331)||(45382190-45382341)
chr7 (184-331)||(45397045-45397196)
chr7 (100-174)||(11027309-11027384)
chr7 (15-167)||(4274081-4274233)
chr7 (119-174)||(32998741-32998796)
chr7 (119-174)||(1591815-1591870)
chr7 (75-144)||(10922441-10922510)
chr7 (75-144)||(16499569-16499638)
chr7 (75-144)||(16508864-16508933)
chr7 (75-144)||(16523980-16524049)
chr7 (119-171)||(36880113-36880165)
chr7 (206-277)||(2585164-2585235)
chr7 (75-144)||(18622204-18622273)
chr7 (76-144)||(15919590-15919658)
chr7 (184-277)||(16715570-16715665)
chr7 (184-277)||(17689806-17689901)
[»] chr3 (53 HSPs)
chr3 (10-330)||(51776635-51776957)
chr3 (10-330)||(51791721-51792043)
chr3 (69-331)||(28015953-28016216)
chr3 (69-331)||(28031271-28031534)
chr3 (69-260)||(4337083-4337276)
chr3 (69-260)||(4352223-4352416)
chr3 (69-260)||(28363867-28364059)
chr3 (10-331)||(5709918-5710241)
chr3 (10-331)||(5720828-5721151)
chr3 (10-331)||(5731731-5732054)
chr3 (10-331)||(5760314-5760637)
chr3 (77-331)||(26295611-26295866)
chr3 (66-213)||(32289903-32290051)
chr3 (66-213)||(32300190-32300338)
chr3 (69-174)||(26680164-26680270)
chr3 (10-174)||(26427628-26427793)
chr3 (75-174)||(4411434-4411532)
chr3 (75-174)||(4426814-4426912)
chr3 (184-331)||(47018272-47018419)
chr3 (184-331)||(47033186-47033333)
chr3 (10-170)||(48460382-48460543)
chr3 (10-170)||(48476141-48476302)
chr3 (10-176)||(24999730-24999897)
chr3 (20-163)||(5599733-5599875)
chr3 (20-163)||(5614974-5615116)
chr3 (69-167)||(11100932-11101030)
chr3 (69-167)||(11116024-11116122)
chr3 (66-163)||(5586581-5586677)
chr3 (66-163)||(5620802-5620898)
chr3 (66-163)||(37002760-37002856)
chr3 (69-163)||(31954842-31954935)
chr3 (69-163)||(31970119-31970212)
chr3 (41-163)||(50139698-50139819)
chr3 (19-167)||(29655967-29656114)
chr3 (75-174)||(6226934-6227033)
chr3 (75-174)||(16400772-16400871)
chr3 (75-174)||(22491774-22491873)
chr3 (19-167)||(29670611-29670758)
chr3 (119-174)||(5008263-5008318)
chr3 (119-174)||(5023522-5023577)
chr3 (119-212)||(10388562-10388656)
chr3 (119-212)||(10405935-10406029)
chr3 (119-174)||(24322716-24322771)
chr3 (119-174)||(24338068-24338123)
chr3 (75-144)||(4787318-4787387)
chr3 (75-144)||(19927421-19927490)
chr3 (119-167)||(28106355-28106403)
chr3 (119-167)||(28121591-28121639)
chr3 (119-277)||(20567302-20567460)
chr3 (119-277)||(20582431-20582589)
chr3 (75-144)||(4802156-4802225)
chr3 (75-144)||(15731700-15731769)
chr3 (75-144)||(15746785-15746854)
[»] chr8 (24 HSPs)
chr8 (69-331)||(15902996-15903259)
chr8 (69-213)||(5564452-5564597)
chr8 (10-174)||(3337909-3338074)
chr8 (240-331)||(19198524-19198615)
chr8 (75-167)||(3335056-3335148)
chr8 (66-174)||(33253270-33253379)
chr8 (66-174)||(33268473-33268582)
chr8 (76-167)||(12083036-12083127)
chr8 (76-167)||(12098280-12098371)
chr8 (79-163)||(31480150-31480233)
chr8 (79-163)||(31495296-31495379)
chr8 (290-331)||(29825677-29825718)
chr8 (290-331)||(29839402-29839443)
chr8 (240-295)||(19213615-19213670)
chr8 (119-174)||(31350541-31350596)
chr8 (119-174)||(31364341-31364396)
chr8 (75-144)||(15209450-15209519)
chr8 (75-144)||(18800253-18800322)
chr8 (119-174)||(15323522-15323577)
chr8 (119-174)||(15503891-15503946)
chr8 (119-174)||(33241381-33241436)
chr8 (119-174)||(33270725-33270780)
chr8 (20-50)||(31480264-31480294)
chr8 (20-50)||(31495410-31495440)
[»] scaffold0667 (1 HSPs)
scaffold0667 (69-213)||(7946-8090)
[»] chr5 (54 HSPs)
chr5 (69-213)||(18365841-18365985)
chr5 (69-213)||(18380880-18381024)
chr5 (69-260)||(34611084-34611277)
chr5 (69-260)||(34626201-34626394)
chr5 (69-211)||(40463945-40464087)
chr5 (69-211)||(40478836-40478978)
chr5 (69-213)||(37210937-37211081)
chr5 (69-260)||(5339752-5339946)
chr5 (69-213)||(25638499-25638644)
chr5 (10-331)||(13432695-13433017)
chr5 (10-331)||(13443589-13443911)
chr5 (75-331)||(5647506-5647761)
chr5 (75-331)||(5632632-5632887)
chr5 (10-174)||(18490917-18491082)
chr5 (10-174)||(18506232-18506397)
chr5 (75-211)||(18118874-18119010)
chr5 (75-211)||(18129254-18129390)
chr5 (240-331)||(6869207-6869298)
chr5 (240-331)||(6884331-6884422)
chr5 (184-331)||(32596913-32597059)
chr5 (75-174)||(37650043-37650142)
chr5 (76-174)||(24785710-24785809)
chr5 (41-163)||(26445107-26445228)
chr5 (75-167)||(30146580-30146672)
chr5 (75-167)||(30161791-30161883)
chr5 (75-174)||(12056107-12056206)
chr5 (100-174)||(37726617-37726692)
chr5 (75-173)||(43072813-43072911)
chr5 (75-173)||(43088100-43088198)
chr5 (75-164)||(3784116-3784205)
chr5 (75-164)||(3799471-3799560)
chr5 (79-163)||(33873926-33874009)
chr5 (79-163)||(33884829-33884912)
chr5 (76-174)||(32586533-32586632)
chr5 (76-174)||(32604962-32605061)
chr5 (168-277)||(8655897-8656007)
chr5 (168-277)||(8670871-8670981)
chr5 (168-277)||(37349000-37349110)
chr5 (168-277)||(37364049-37364159)
chr5 (119-174)||(29972573-29972628)
chr5 (119-174)||(30024015-30024070)
chr5 (119-174)||(30039279-30039334)
chr5 (293-331)||(31816580-31816618)
chr5 (293-331)||(31831610-31831648)
chr5 (20-57)||(29972691-29972728)
chr5 (20-57)||(30023915-30023952)
chr5 (20-57)||(30039179-30039216)
chr5 (76-143)||(37295624-37295691)
chr5 (194-277)||(37742224-37742307)
chr5 (194-277)||(37776306-37776389)
chr5 (81-143)||(11544882-11544944)
chr5 (81-143)||(11558941-11559003)
chr5 (75-144)||(16681716-16681785)
chr5 (75-144)||(29892335-29892404)
[»] chr6 (39 HSPs)
chr6 (69-213)||(24048225-24048369)
chr6 (75-277)||(28202006-28202209)
chr6 (75-277)||(28217074-28217277)
chr6 (119-211)||(27067343-27067435)
chr6 (119-211)||(27039004-27039096)
chr6 (194-331)||(27619376-27619514)
chr6 (194-331)||(27634986-27635124)
chr6 (240-331)||(8189081-8189172)
chr6 (10-174)||(4519811-4519976)
chr6 (10-174)||(4534998-4535163)
chr6 (10-174)||(16668632-16668797)
chr6 (10-174)||(16683914-16684079)
chr6 (185-331)||(4729356-4729503)
chr6 (65-213)||(27351897-27352047)
chr6 (65-213)||(27364010-27364160)
chr6 (65-213)||(27454353-27454503)
chr6 (74-228)||(28977679-28977833)
chr6 (75-174)||(30970280-30970378)
chr6 (75-277)||(26106628-26106834)
chr6 (75-277)||(26121860-26122066)
chr6 (75-174)||(16564142-16564240)
chr6 (74-174)||(4453352-4453452)
chr6 (101-163)||(33366439-33366501)
chr6 (101-163)||(33377711-33377773)
chr6 (66-174)||(16934459-16934568)
chr6 (66-174)||(16949568-16949677)
chr6 (79-163)||(13514616-13514699)
chr6 (79-163)||(13525519-13525602)
chr6 (75-144)||(18939626-18939695)
chr6 (75-143)||(26913105-26913173)
chr6 (75-143)||(26930392-26930460)
chr6 (75-142)||(12616551-12616618)
chr6 (75-142)||(18815946-18816013)
chr6 (76-142)||(20155261-20155327)
chr6 (76-142)||(22177505-22177571)
chr6 (79-144)||(16346151-16346216)
chr6 (20-48)||(16997469-16997497)
chr6 (20-48)||(34454764-34454792)
chr6 (20-48)||(34469052-34469080)
[»] chr2 (49 HSPs)
chr2 (69-213)||(9355543-9355687)
chr2 (69-213)||(27213964-27214108)
chr2 (10-331)||(16160312-16160634)
chr2 (10-331)||(16171213-16171535)
chr2 (10-331)||(27813426-27813748)
chr2 (10-331)||(27798337-27798659)
chr2 (240-331)||(16860169-16860260)
chr2 (17-174)||(250837-250994)
chr2 (17-174)||(266367-266524)
chr2 (20-260)||(19552167-19552410)
chr2 (184-331)||(37920319-37920464)
chr2 (184-331)||(37935257-37935402)
chr2 (75-174)||(31472695-31472794)
chr2 (17-143)||(5800210-5800336)
chr2 (75-167)||(31870828-31870920)
chr2 (75-167)||(31886021-31886113)
chr2 (75-174)||(37369697-37369796)
chr2 (75-174)||(37387531-37387630)
chr2 (76-174)||(34801317-34801416)
chr2 (105-163)||(12581416-12581474)
chr2 (105-163)||(12595408-12595466)
chr2 (75-163)||(13926947-13927035)
chr2 (75-163)||(13942143-13942231)
chr2 (75-174)||(22918493-22918592)
chr2 (75-174)||(22931603-22931702)
chr2 (119-174)||(19406826-19406881)
chr2 (119-174)||(19421826-19421881)
chr2 (75-173)||(34183460-34183558)
chr2 (168-277)||(21667667-21667777)
chr2 (168-277)||(21682668-21682778)
chr2 (194-277)||(34281672-34281755)
chr2 (119-174)||(37676211-37676266)
chr2 (119-174)||(37691475-37691530)
chr2 (119-174)||(37706740-37706795)
chr2 (19-163)||(16962520-16962664)
chr2 (184-277)||(27771976-27772069)
chr2 (184-277)||(27793117-27793210)
chr2 (168-277)||(19558376-19558486)
chr2 (75-144)||(18139807-18139876)
chr2 (75-144)||(28876697-28876766)
chr2 (75-144)||(28891907-28891976)
chr2 (194-238)||(27115477-27115521)
chr2 (194-238)||(27126442-27126486)
chr2 (75-143)||(28274720-28274788)
chr2 (75-144)||(20830604-20830673)
chr2 (75-144)||(28270422-28270491)
chr2 (75-144)||(37871314-37871383)
chr2 (75-143)||(17259363-17259431)
chr2 (76-144)||(32237489-32237557)
[»] chr1 (17 HSPs)
chr1 (69-211)||(16558633-16558775)
chr1 (75-331)||(36507684-36507941)
chr1 (75-331)||(48094726-48094983)
chr1 (240-331)||(9079422-9079513)
chr1 (240-331)||(10935895-10935986)
chr1 (240-331)||(10955086-10955177)
chr1 (75-174)||(47201505-47201604)
chr1 (75-212)||(14894257-14894395)
chr1 (101-174)||(30727658-30727732)
chr1 (75-163)||(13767486-13767574)
chr1 (290-331)||(14414082-14414123)
chr1 (119-174)||(41783672-41783727)
chr1 (119-174)||(41798940-41798995)
chr1 (75-220)||(14689397-14689542)
chr1 (75-144)||(18292622-18292691)
chr1 (75-144)||(21480599-21480668)
chr1 (184-277)||(36763887-36763982)
[»] scaffold0038 (2 HSPs)
scaffold0038 (75-277)||(2504-2707)
scaffold0038 (75-277)||(17572-17775)
[»] chr4 (37 HSPs)
chr4 (19-213)||(54827962-54828157)
chr4 (19-213)||(54843189-54843384)
chr4 (10-174)||(20328765-20328930)
chr4 (10-174)||(20335787-20335952)
chr4 (240-331)||(5000807-5000898)
chr4 (240-331)||(5015873-5015964)
chr4 (20-163)||(14728966-14729110)
chr4 (66-213)||(24464071-24464220)
chr4 (75-211)||(36320593-36320729)
chr4 (75-211)||(36334802-36334938)
chr4 (75-167)||(762425-762517)
chr4 (75-211)||(36349892-36350028)
chr4 (20-163)||(48916806-48916950)
chr4 (75-174)||(18790931-18791030)
chr4 (75-174)||(18805559-18805658)
chr4 (75-277)||(6564402-6564604)
chr4 (75-277)||(6579436-6579638)
chr4 (75-174)||(30748321-30748420)
chr4 (75-174)||(30763626-30763725)
chr4 (75-174)||(33664106-33664205)
chr4 (75-174)||(33682918-33683017)
chr4 (75-163)||(4564872-4564960)
chr4 (119-174)||(19367842-19367897)
chr4 (290-331)||(3912083-3912124)
chr4 (184-277)||(1501831-1501924)
chr4 (19-144)||(9480279-9480404)
chr4 (119-174)||(5704407-5704462)
chr4 (168-277)||(40096045-40096155)
chr4 (168-277)||(40111056-40111166)
chr4 (75-144)||(19640520-19640589)
chr4 (75-144)||(22112559-22112628)
chr4 (168-277)||(14093224-14093334)
chr4 (168-277)||(14108325-14108435)
chr4 (75-144)||(9248749-9248818)
chr4 (75-144)||(18028679-18028748)
chr4 (75-144)||(34854817-34854886)
chr4 (75-143)||(15386433-15386501)
[»] scaffold0923 (1 HSPs)
scaffold0923 (69-174)||(3438-3543)
[»] scaffold0336 (1 HSPs)
scaffold0336 (240-331)||(3120-3211)
[»] scaffold1816 (1 HSPs)
scaffold1816 (10-176)||(446-613)
[»] scaffold1648 (1 HSPs)
scaffold1648 (185-331)||(617-764)
[»] scaffold1179 (1 HSPs)
scaffold1179 (17-170)||(960-1115)
[»] scaffold0166 (1 HSPs)
scaffold0166 (76-174)||(28093-28192)
[»] scaffold0027 (1 HSPs)
scaffold0027 (75-174)||(113812-113910)
[»] scaffold0196 (1 HSPs)
scaffold0196 (69-277)||(20712-20920)
[»] scaffold0350 (1 HSPs)
scaffold0350 (119-174)||(12807-12862)
[»] scaffold0048 (1 HSPs)
scaffold0048 (75-174)||(31164-31262)
[»] scaffold0029 (1 HSPs)
scaffold0029 (75-174)||(5810-5908)
[»] scaffold0182 (1 HSPs)
scaffold0182 (68-277)||(3683-3893)
[»] scaffold0159 (1 HSPs)
scaffold0159 (119-174)||(16232-16287)
[»] scaffold0022 (1 HSPs)
scaffold0022 (75-143)||(154929-154997)
[»] scaffold0289 (1 HSPs)
scaffold0289 (69-144)||(16075-16150)
[»] scaffold0372 (1 HSPs)
scaffold0372 (168-220)||(15755-15808)


Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 330
Target Start/End: Complemental strand, 26265304 - 26264982
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26265304 gagaagaacttagagagagaaaggggagtgaaaaatgaagaaaaccggaacctcttcccttatatagccagtgaaccggaccggtttatttccggtccag 26265205  T
Q  110 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctg-agttttgagtgtgggctttgggtttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  26265204 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgtctttttgagtgtgggctttgggtttg 26265105  T
Q  209 ggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaat 306  Q
    |||||  | | ||||||||||| | ||  ||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  26265104 ggcttagtctgcttttacgttt-ttttgctttttttgctacttgcaccatacttgcctgctgtttgcacccttggttcatgttaattttcatcaataaat 26265006  T
Q  307 tccaagaaatttactatgtcattt 330  Q
    ||||||||||||||||||||||||    
T  26265005 tccaagaaatttactatgtcattt 26264982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 10 - 330
Target Start/End: Complemental strand, 26325336 - 26325014
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  26325336 gagaagaacttagagagagaaaggggagtgaaaaatgaagaaaaccggaacctcttcccttatatagccagtgaaccggaccggtttatttccggtccag 26325237  T
Q  110 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctg-agttttgagtgtgggctttgggtttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  26325236 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgtctttttgagtgtgggctttgggtttg 26325137  T
Q  209 ggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaat 306  Q
    |||||  | | ||||||||||| | ||  ||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  26325136 ggcttagtctgcttttacgttt-ttttgctttttttgctacttgcaccatacttgcctgctgtttgcacccttggttcatgttaattttcatcaataaat 26325038  T
Q  307 tccaagaaatttactatgtcattt 330  Q
    ||||||||||||||||||||||||    
T  26325037 tccaagaaatttactatgtcattt 26325014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 26696564 - 26696886
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26696564 gagaagaacttagagagagaaaggggagtgaaaaatgaagaaaaccggaaccccttcccttatatagccagtgaaccggaccggtttatttccggtccag 26696663  T
Q  110 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctg-agttttgagtgtgggctttgggtttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  26696664 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgtctttttgagtgtgggctttgggtttg 26696763  T
Q  209 ggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaat 306  Q
    |||||  | | |||| |||||  | ||  ||| |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| ||||||||||    
T  26696764 ggcttagtctgctttcacgtt--ttttgctttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgctaattttcatcaataaat 26696861  T
Q  307 tccaagaaatttactatgtcatttt 331  Q
    |||||||||||| | ||||||||||    
T  26696862 tccaagaaatttgccatgtcatttt 26696886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 74 - 331
Target Start/End: Complemental strand, 31081297 - 31081040
Alignment:
Q  74 tagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31081297 tagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 31081198  T
Q  174 tacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
    | ||||||||||||||||||||||||||||||||||||||  | |||||| |||||  | ||  ||| |||||||||||||||||| |||||| ||||||    
T  31081197 tgcaatctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgtt--ttttgctttttttgctacttgcaccatacttgcctactgttt 31081100  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31081099 gcaccctctgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 31081040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 74 - 331
Target Start/End: Complemental strand, 31093226 - 31092969
Alignment:
Q  74 tagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31093226 tagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 31093127  T
Q  174 tacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
    | ||||||||||||||||||||||||||||||||||||||  | |||||| |||||  | ||  ||| |||||||||||||||||| |||||| ||||||    
T  31093126 tgcaatctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgtt--ttttgctttttttgctacttgcaccatacttgcctactgttt 31093029  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31093028 gcaccctctgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 31092969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 24892541 - 24892399
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24892541 ttatatagccagtgaaccggaccggtttatttccggtctagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 24892442  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||| |||||||  |||||||| ||||||||||||||||||    
T  24892441 tcctgtgcaatctgttttttgagtatgggctttgggtttgggc 24892399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 75 - 331
Target Start/End: Original strand, 21541562 - 21541819
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | |||||    
T  21541562 agccagtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgtcccctgt 21541660  T
Q  175 acaatctgag-ttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
     ||  | ||  ||||||||||||||||||||||||||||| || | |||| |||||| | ||| ||| |||||||| ||||||||| ||||||| |||||    
T  21541661 gcatccggatcttttgagtgtgggctttgggtttgggcttagtctgttttcacgttttt-tttgtttttttgctacctgcaccatacttgcctgttgttt 21541759  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||| |||||| || ||||||||| ||||||||||||||||| |||| ||||||||||    
T  21541760 gcacccgttgttcatgctaatttttaccaataaattccaagaaaattaccatgtcatttt 21541819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 2771128 - 2771222
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2771128 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 2771222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 2783183 - 2783277
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2783183 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 2783277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 26430161 - 26430252
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  26430161 tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttaccatgtcatttt 26430252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 26445599 - 26445690
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  26445599 tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttaccatgtcatttt 26445690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 26498525 - 26498381
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    ||||||||||||||||||||||||||||||| ||||||    ||||| ||| | || |||||||||||||||||||  |   |||||||||||||  |||    
T  26498525 tagagagagaaaggggagtgaaaaatgaagaaaaccggtgttccttcacttttataagccagtgaaccggaccggtccaagaccggtccagtcccttttg 26498426  T
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  26498425 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgt 26498381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 26599504 - 26599648
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    ||||||||||||||||||||||||||||||| ||||||    ||||| ||| | || |||||||||||||||||||  |   |||||||||||||  |||    
T  26599504 tagagagagaaaggggagtgaaaaatgaagaaaaccggtgttccttcacttttataagccagtgaaccggaccggtccaagaccggtccagtcccttttg 26599603  T
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  26599604 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgt 26599648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 194 - 331
Target Start/End: Complemental strand, 24582868 - 24582732
Alignment:
Q  194 tgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaa 291  Q
    |||||||||||||||||||| || | |||| ||||||   ||| ||| |||||||||||||||||| ||||||||||||||||||| |||||| || |||    
T  24582868 tgggctttgggtttgggcttagtctgttttcacgttt---tttgtttttttgctacttgcaccatacttgcctgctgtttgcacccgttgttcatgctaa 24582772  T
Q  292 tttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||| ||||||||||||||||| |||| ||||||||||    
T  24582771 tttttaccaataaattccaagaaaattaccatgtcatttt 24582732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 4135466 - 4135375
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||||||||||    
T  4135466 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgtcatttt 4135375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 4150392 - 4150301
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||||||||||    
T  4150392 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgtcatttt 4150301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26660289 - 26660084
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgtt-cctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | ||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  26660289 agccagcgaaccggaccggtccagt-ccggtccattccccttcgtttcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctg 26660191  T
Q  174 tacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtt 270  Q
    | ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   |||||||    
T  26660190 tgcaaccggatcttctagtgtactgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtt 26660091  T
Q  271 tgcaccc 277  Q
    || ||||    
T  26660090 tgaaccc 26660084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26675482 - 26675277
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgtt-cctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | ||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  26675482 agccagcgaaccggaccggtccagt-ccggtccattccccttcgtttcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctg 26675384  T
Q  174 tacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtt 270  Q
    | ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   |||||||    
T  26675383 tgcaaccggatcttctagtgtactgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtt 26675284  T
Q  271 tgcaccc 277  Q
    || ||||    
T  26675283 tgaaccc 26675277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26685619 - 26685414
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgtt-cctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | ||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  26685619 agccagcgaaccggaccggtccagt-ccggtccattccccttcgtttcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctg 26685521  T
Q  174 tacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtt 270  Q
    | ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   |||||||    
T  26685520 tgcaaccggatcttctagtgtactgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtt 26685421  T
Q  271 tgcaccc 277  Q
    || ||||    
T  26685420 tgaaccc 26685414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26689159 - 26688954
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgtt-cctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | ||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  26689159 agccagcgaaccggaccggtccagt-ccggtccattccccttcgtttcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctg 26689061  T
Q  174 tacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtt 270  Q
    | ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   |||||||    
T  26689060 tgcaaccggatcttctagtgtactgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtt 26688961  T
Q  271 tgcaccc 277  Q
    || ||||    
T  26688960 tgaaccc 26688954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 31119829 - 31119920
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||| ||||||    
T  31119829 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgacatttt 31119920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 31134004 - 31134095
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||| ||||||    
T  31134004 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgacatttt 31134095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 45382190 - 45382341
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgttt----gctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | |||||||||||||||||||| || | |||| |||||| | ||| |||||||    |||||||||||||   |||||||||||||||||||    
T  45382190 gttttgactttgggctttgggtttgggcttagtctgttttcacgtttttttttttttgtttttttgctacttgcaccac--ttgcctgctgtttgcaccc 45382287  T
Q  278 tttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
     |||||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  45382288 gttgttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 45382341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 45397045 - 45397196
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgttt----gctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | |||||||||||||||||||| || | |||| |||||| | ||| |||||||    |||||||||||||   |||||||||||||||||||    
T  45397045 gttttgactttgggctttgggtttgggcttagtctgttttcacgtttttttttttttgtttttttgctacttgcaccac--ttgcctgctgtttgcaccc 45397142  T
Q  278 tttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
     |||||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  45397143 gttgttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 45397196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 11027384 - 11027309
Alignment:
Q  100 tccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  11027384 tccggtccattcccctttgattcctggccgtttgatctagggttccagaatcctggatcaatcgtgtggttcctgt 11027309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 4274081 - 4274233
Alignment:
Q  15 gaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtag-ccagtgaaccggaccggtttatttccggtccagtccc 113  Q
    |||||||||||||||||||| |||  |||||||| | ||||||  | ||||| ||| | ||| |||| |||||||||||||  | | |||||||| || |    
T  4274081 gaacttagagagagaaagggaagtagaaaatgaaaa-aaccggtgctccttcacttttataggccagcgaaccggaccggtccagt-ccggtccattctc 4274178  T
Q  114 ccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    | ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  4274179 ctttgattcctggccgtttgatctagggttttagaatcctggatcaatcgtgtgg 4274233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 32998796 - 32998741
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  32998796 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 32998741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 1591870 - 1591815
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  1591870 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 1591815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 10922510 - 10922441
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  10922510 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 10922441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 16499638 - 16499569
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  16499638 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 16499569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 16508933 - 16508864
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  16508933 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 16508864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 16524049 - 16523980
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  16524049 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 16523980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 36880165 - 36880113
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcc 171  Q
    ||||||||||||||||||||||||||| ||  || |||||||| |||||||||    
T  36880165 ttcctggccgtttgatctagggtttcataactctggatcaatcctgtggctcc 36880113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 2585164 - 2585235
Alignment:
Q  206 ttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||||||||| ||||||||| |||||||||   ||||| |||||||||||||   ||||||||| ||||    
T  2585164 ttgggctttgttcatttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttgaaccc 2585235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 18622204 - 18622273
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  18622204 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 18622273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 15919658 - 15919590
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    |||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  15919658 gccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 15919590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 16715570 - 16715665
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | |||||||||||||||||||| |  |||||| |||||| || ||||||   ||||| |||||||||||||   ||||||||| ||||    
T  16715570 gttttgaatatgggctttgggtttgggcttaggtttctttcacgtttttgcttattttcctgctatttgcaccatatttctttgctgtttgaaccc 16715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 17689806 - 17689901
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | |||||||||||||||||||| |  |||||| |||||| || ||||||   ||||| |||||||||||||   ||||||||| ||||    
T  17689806 gttttgaatatgggctttgggtttgggcttaggtttctttcacgtttttgcttattttcctgctatttgcaccatatttctttgctgtttgaaccc 17689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 225; Significance: 1e-124; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 330
Target Start/End: Original strand, 51776635 - 51776957
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  51776635 gagaagaacttagagagagaaaggggagtgaaaaatgaagaaaaccggaacctcttcccttatatagccagtgaaccggaccggtttatttccggtccag 51776734  T
Q  110 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctg-agttttgagtgtgggctttgggtttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  51776735 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgtctttttgagtgtgggctttgggtttg 51776834  T
Q  209 ggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaat 306  Q
    |||||  | | |||| |||||| | ||  ||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  51776835 ggcttagtctgctttcacgttt-ttttgctttttttgctacttgcaccatacttgcctgctgtttacaccctttgttcatgttaattttcatcaataaat 51776933  T
Q  307 tccaagaaatttactatgtcattt 330  Q
    |||||||||||||| |||||||||    
T  51776934 tccaagaaatttaccatgtcattt 51776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 330
Target Start/End: Original strand, 51791721 - 51792043
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  51791721 gagaagaacttagagagagaaaggggagtgaaaaatgaagaaaaccggaacctcttcccttatatagccagtgaaccggaccggtttatttccggtccag 51791820  T
Q  110 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctg-agttttgagtgtgggctttgggtttg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  51791821 tcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgtctttttgagtgtgggctttgggtttg 51791920  T
Q  209 ggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaat 306  Q
    |||||  | | |||| |||||| | ||  ||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  51791921 ggcttagtctgctttcacgttt-ttttgctttttttgctacttgcaccatacttgcctgctgtttacaccctttgttcatgttaattttcatcaataaat 51792019  T
Q  307 tccaagaaatttactatgtcattt 330  Q
    |||||||||||||| |||||||||    
T  51792020 tccaagaaatttaccatgtcattt 51792043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 69 - 331
Target Start/End: Original strand, 28015953 - 28016216
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28015953 ttatatagccagtgaaccggaccggtttatttccggtccagccccccttgttcctggccgtttgatctagggtttcagaatcctaaatcaatcgtgtggc 28016052  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||| | ||  ||| |||||||||||||||||| |||||| |    
T  28016053 tcctgtacaatctgagttttgagcgtgggctttgggtttgggcttagttttctttcacgttt-ttttgctttttttgctacttgcaccatacttgcctac 28016151  T
Q  267 tgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28016152 tgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 28016216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 69 - 331
Target Start/End: Original strand, 28031271 - 28031534
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  28031271 ttatatagccagtgaaccggaccggtttatttccggtccagccccccttgttcctggccgtttgatctagggtttcagaatcctaaatcaatcgtgtggc 28031370  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||| | ||  ||| |||||||||||||||||| |||||| |    
T  28031371 tcctgtacaatctgagttttgagcgtgggctttgggtttgggcttagttttctttcacgttt-ttttgctttttttgctacttgcaccatacttgcctac 28031469  T
Q  267 tgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28031470 tgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 28031534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 4337276 - 4337083
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4337276 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 4337177  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  | |||||| |||||| | | | ||| ||||||| ||||||| |||||    
T  4337176 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgtttttttgtttttttttgctatttgcaccgtattt 4337083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 4352416 - 4352223
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4352416 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 4352317  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  | |||||| |||||| | | | ||| ||||||| ||||||| |||||    
T  4352316 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgtttttttgtttttttttgctatttgcaccgtattt 4352223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 28364059 - 28363867
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28364059 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 28363960  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    |||||| || ||||||| |||||||||||||||||||||||||||  | |||||| |||||| | ||| ||| ||||||| ||||||| |||||    
T  28363959 tcctgtgcagtctgagtcttgagtgtgggctttgggtttgggcttagttttctttcacgttt-tttttgtttttttgctatttgcaccgtattt 28363867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 5709918 - 5710241
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  5709918 gagaagaatttagagagagaaaggaaagtgtgaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 5710017  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  5710018 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 5710115  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| | ||  ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5710116 tgggctcaagtttcttttacgttttttttgcttt-tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 5710214  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  5710215 attccaagaaatttaccatgtcatttt 5710241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 5720828 - 5721151
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  5720828 gagaagaatttagagagagaaaggaaagtgtgaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 5720927  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  5720928 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 5721025  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| | ||  ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5721026 tgggctcaagtttcttttacgttttttttgcttt-tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 5721124  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  5721125 attccaagaaatttaccatgtcatttt 5721151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 5731731 - 5732054
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  5731731 gagaagaatttagagagagaaaggaaagtgtgaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 5731830  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  5731831 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 5731928  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| | ||  ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5731929 tgggctcaagtttcttttacgttttttttgcttt-tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 5732027  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  5732028 attccaagaaatttaccatgtcatttt 5732054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 5760637 - 5760314
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  5760637 gagaagaatttagagagagaaaggaaagtgtgaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 5760538  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  5760537 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 5760440  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| | ||  ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  5760439 tgggctcaagtttcttttacgttttttttgcttt-tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 5760341  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  5760340 attccaagaaatttaccatgtcatttt 5760314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 77 - 331
Target Start/End: Original strand, 26295611 - 26295866
Alignment:
Q  77 ccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtac 176  Q
    ||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | ||||| |    
T  26295611 ccagtgaaccggaccggtccaagaccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgccccctgtgc 26295710  T
Q  177 aatctgagttttgag-tgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
    |  | ||  ||  || | |||||||||||||||||||| |||  |||| |||||| | ||  ||| |||||||||||||||||| |||||||||||||||    
T  26295711 atccggaccttgtagctttgggctttgggtttgggcttagttttctttcacgttttt-ttgctttttttgctacttgcaccatacttgcctgctgtttgc 26295809  T
Q  274 accctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26295810 acc-tctgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 26295866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 32289903 - 32290051
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    |||||||  ||||||||||||||||||||| |   ||||||||  |||||||| |||||||||||||||||||||||||||| | ||| |||||||||||    
T  32289903 cccttataaagccagtgaaccggaccggttcaggaccggtccaaccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcgtg 32290002  T
Q  165 tggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    ||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  32290003 tggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 32290051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 66 - 213
Target Start/End: Original strand, 32300190 - 32300338
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    |||||||  ||||||||||||||||||||| |   ||||||||  |||||||| |||||||||||||||||||||||||||| | ||| |||||||||||    
T  32300190 cccttataaagccagtgaaccggaccggttcaggaccggtccaaccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcgtg 32300289  T
Q  165 tggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    ||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  32300290 tggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 32300338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 26680270 - 26680164
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| |||||||||||||||||||||| |   |||||||| ||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  26680270 ttatatagccagtgaaccggaccggttcagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtgg 26680171  T
Q  168 ctcctgt 174  Q
    |||||||    
T  26680170 ctcctgt 26680164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 26427628 - 26427793
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||||||||||||||||||| ||||| |||||| | | ||||||  | ||||| ||| | ||||||||||| |||||||||  |   ||||||||     
T  26427628 gagaagaacttagagagagaaaggagagtggaaaatggaaaaaaccggtgctccttcacttttatagccagtgaatcggaccggtccaggaccggtccat 26427727  T
Q  110 tcccccttgttcct-ggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    || || ||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26427728 tctcctttgtttcttggccgtttgatctagggtttcagaatcctggatcaatcgtgtggttcctgt 26427793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 4411434 - 4411532
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  4411434 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctgt 4411532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 4426814 - 4426912
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  4426814 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctgt 4426912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 47018272 - 47018419
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttg 281  Q
    ||||||| | ||||||||||||||||||||  | |  ||| |||||| | ||| ||  ||||||||||||||||   ||||||||||||||||||| |||    
T  47018272 gttttgactttgggctttgggtttgggcttaatctgttttcacgtttttttttgttcttttgctacttgcaccac--ttgcctgctgtttgcacccgttg 47018369  T
Q  282 ttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  47018370 ttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 47018419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 47033186 - 47033333
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttg 281  Q
    ||||||| | ||||||||||||||||||||  | |  ||| |||||| | ||| ||  ||||||||||||||||   ||||||||||||||||||| |||    
T  47033186 gttttgactttgggctttgggtttgggcttaatctgttttcacgtttttttttgttcttttgctacttgcaccac--ttgcctgctgtttgcacccgttg 47033283  T
Q  282 ttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  47033284 ttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 47033333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 48460382 - 48460543
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  48460382 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 48460481  T
Q  110 tcccccttgttcc-tggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctc 170  Q
    ||||| ||| ||| |||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  48460482 tcccctttgatccctggccgtttgatctagggttccaggatcctggatcaatcgtgtggctc 48460543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 170
Target Start/End: Original strand, 48476141 - 48476302
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  48476141 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 48476240  T
Q  110 tcccccttgttcc-tggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctc 170  Q
    ||||| ||| ||| |||||||||||||||||||| ||| ||||| |||||||||||||||||    
T  48476241 tcccctttgatccctggccgtttgatctagggttccaggatcctggatcaatcgtgtggctc 48476302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 24999897 - 24999730
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtcca 108  Q
    |||| ||| ||||||||||| |||  ||||||||||| | | ||||||| | | ||||||| | || ||||| |||||||||||||  | | ||||||||    
T  24999897 gagaagaatttagagagagagaggaaagtgaaaaatggaaaaaaccggagctctttcccttttataagccagcgaaccggaccggtccaat-ccggtcca 24999799  T
Q  109 gtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtac 176  Q
     ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  24999798 ttcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggtccctgtac 24999730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 5599875 - 5599733
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgt 119  Q
    |||||||||||||||||||| ||| |||| | ||||||  ||| |    |||| |||||||||||||||||||||  |   |||||||||||||  ||||    
T  5599875 tagagagagaaaggggagtggaaagtgaataaaaccggtccccttgtgtttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgt 5599777  T
Q  120 tcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  5599776 tcctggccgtttgatctagggtttcagaaccctggatcaatcgt 5599733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 5615116 - 5614974
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgt 119  Q
    |||||||||||||||||||| ||| |||| | ||||||  ||| |    |||| |||||||||||||||||||||  |   |||||||||||||  ||||    
T  5615116 tagagagagaaaggggagtggaaagtgaataaaaccggtccccttgtgtttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgt 5615018  T
Q  120 tcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||    
T  5615017 tcctggccgtttgatctagggtttcagaaccctggatcaatcgt 5614974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 11101030 - 11100932
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| |||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  11101030 ttatatagccagtgaaccggaccggtccaggaccggtccaatcccctttgttcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtgg 11100932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 11116122 - 11116024
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| |||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  11116122 ttatatagccagtgaaccggaccggtccaggaccggtccaatcccctttgttcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtgg 11116024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 5586677 - 5586581
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||| |||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  5586677 cccttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 5586581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 5620898 - 5620802
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||| |||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  5620898 cccttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 5620802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 37002856 - 37002760
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||| |||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  37002856 cccttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 37002760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 31954935 - 31954842
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||| |||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  31954935 ttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 31954842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 163
Target Start/End: Complemental strand, 31970212 - 31970119
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||| |||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  31970212 ttatatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 31970119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 50139819 - 50139698
Alignment:
Q  41 aaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctaggg 140  Q
    |||||||||  ||||||| | ||| || || | |||||||||||||||||||||  |   |||||||||||||  |||||||||||||||||||||||||    
T  50139819 aaaatgaagtaaaccggagctcctccctttttatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctaggg 50139721  T
Q  141 tttcagaatcctagatcaatcgt 163  Q
    |||||||| ||| ||||||||||    
T  50139720 tttcagaaccctggatcaatcgt 50139698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 29656114 - 29655967
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    |||||||||||||||    || |||||||| | ||||||| | ||| || |||| |||||||||||||||||||||  | | |||||||| ||||| |||    
T  29656114 ttagagagagaaaggattttgcaaaatgaaaa-aaccggagctcctccctttatatagccagtgaaccggaccggtccaat-ccggtccattcccctttg 29656017  T
Q  119 -ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
     |||||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  29656016 attcctggccgtttgatctagggttccaggatcctggatcaatcgtgtgg 29655967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 6226934 - 6227033
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| || || ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  6226934 agccagcgaaccggaccggtccagt-ccggtccattctcctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggttcctg 6227032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 16400871 - 16400772
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  16400871 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 16400773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 22491774 - 22491873
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| || || ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  22491774 agccagcgaaccggaccggtccagt-ccggtccattctcctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggttcctg 22491872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 29670758 - 29670611
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    |||||||||||||||    || |||||||| | ||||||| | ||| || |||| |||||||||||||||||||||  | | |||||||| ||||| |||    
T  29670758 ttagagagagaaaggattttgcaaaatgaaaa-aaccggagctcctccctttatatagccagtgaaccggaccggtccaat-ccggtccattcccctttg 29670661  T
Q  119 -ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
     |||||| ||||||||||||||||| ||| ||||| ||||||||||||||    
T  29670660 attcctgaccgtttgatctagggttccaggatcctggatcaatcgtgtgg 29670611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 5008263 - 5008318
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  5008263 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 5008318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 5023522 - 5023577
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  5023522 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 5023577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 10388562 - 10388656
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctga-gttttgagtgtgggctttgggtttgggct 212  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||| |||||| ||| | ||  ||||  || |||||||||||||||||||    
T  10388562 ttcctggccgtttgatctagggtttcaggatcctggatcaatcgtatggttcctgtgcaaccggatcttttaggtttgggctttgggtttgggct 10388656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 10405935 - 10406029
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctga-gttttgagtgtgggctttgggtttgggct 212  Q
    |||||||||||||||||||||||||||| ||||| |||||||||| ||| |||||| ||| | ||  ||||  || |||||||||||||||||||    
T  10405935 ttcctggccgtttgatctagggtttcaggatcctggatcaatcgtatggttcctgtgcaaccggatcttttaggtttgggctttgggtttgggct 10406029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 24322716 - 24322771
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  24322716 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 24322771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 24338068 - 24338123
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  24338068 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 24338123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 4787387 - 4787318
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||| |||||||||||||    
T  4787387 agccagtgaaccggaccggttcaagaccggtccaaccccctttgttcctggccgttggatctagggtttc 4787318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 19927421 - 19927490
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||| |||||||||||||    
T  19927421 agccagtgaaccggaccggtccaagaccggtccaatcccctttgttcctggccgttggatctagggtttc 19927490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 28106403 - 28106355
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  28106403 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtgg 28106355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 28121639 - 28121591
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  28121639 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtgg 28121591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 277
Target Start/End: Complemental strand, 20567460 - 20567302
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctttgtt 217  Q
    |||||||||||| |||||||||||||  |  ||| ||||||||    | ||||||| |||||||||||||| | | ||||| || |||||||| ||||||    
T  20567460 ttcctggccgttggatctagggtttcttac-cctggatcaatccaacgtctcctgtgcaatctgagttttgtgagttgggcctttggtttgggttttgtt 20567362  T
Q  218 cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    | ||||||||| |||||||||   ||||| ||||||| |||||   ||||||||| ||||    
T  20567361 catttacgtttttgtttattttcctgctatttgcaccctatttctttgctgtttgaaccc 20567302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 277
Target Start/End: Complemental strand, 20582589 - 20582431
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctttgtt 217  Q
    |||||||||||| |||||||||||||  |  ||| ||||||||    | ||||||| |||||||||||||| | | ||||| || |||||||| ||||||    
T  20582589 ttcctggccgttggatctagggtttcttac-cctggatcaatccaacgtctcctgtgcaatctgagttttgtgagttgggcctttggtttgggttttgtt 20582491  T
Q  218 cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    | ||||||||| |||||||||   ||||| ||||||| |||||   ||||||||| ||||    
T  20582490 catttacgtttttgtttattttcctgctatttgcaccctatttctttgctgtttgaaccc 20582431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 4802225 - 4802156
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |    |||||||  |||| ||||||||||||||| |||||||||||||    
T  4802225 agccagtgaaccggaccggttcaagatcggtccaaccccctttgttcctggccgttggatctagggtttc 4802156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 15731769 - 15731700
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   || ||||| ||||| |||||| |||||||| |||||||||||||    
T  15731769 agccagtgaaccggaccggtccaggaccagtccaatcccctttgttcttggccgttggatctagggtttc 15731700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 15746854 - 15746785
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   || ||||| ||||| |||||| |||||||| |||||||||||||    
T  15746854 agccagtgaaccggaccggtccaggaccagtccaatcccctttgttcttggccgttggatctagggtttc 15746785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 69 - 331
Target Start/End: Complemental strand, 15903259 - 15902996
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15903259 ttatatagccagtgaaccggaccggtttatttccggtccagccccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 15903160  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  | |||||| |||||| | ||  ||| |||||||||||||||||| |||||| |    
T  15903159 tcctgtacaatctgagttttgagcgtgggctttgggtttgggcttagttttctttcacgttt-ttttggtttttttgctacttgcaccatacttgcctac 15903061  T
Q  267 tgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15903060 tgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 15902996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 5564597 - 5564452
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5564597 ttatatagccagtgaaccggaccggtttatttccggtccagtcccctttgattcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 5564498  T
Q  168 ctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  5564497 ctcctgtgcagtctgagttttgagtgtgggctttgggtttgggctt 5564452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 3338074 - 3337909
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  3338074 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccaaaaccggtccat 3337975  T
Q  110 tcccccttgttcc-tggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| ||| ||||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  3337974 tcccctttgatccctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctgt 3337909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 19198615 - 19198524
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||||||||||    
T  19198615 tttgctacttgcaccataactgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgtcatttt 19198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 3335148 - 3335056
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3335148 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgcttgatctagggtttcagaatcctggatcaatcgtgtgg 3335056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 33253270 - 33253379
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    ||||||| |||||||||||||||||||||  |   |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| |||||||||||    
T  33253270 cccttatatagccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtg 33253369  T
Q  165 tggctcctgt 174  Q
     | |||||||    
T  33253370 cgtctcctgt 33253379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 33268473 - 33268582
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    ||||||| |||||||||||||||||||||  |   |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| |||||||||||    
T  33268473 cccttatatagccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtg 33268572  T
Q  165 tggctcctgt 174  Q
     | |||||||    
T  33268573 cgtctcctgt 33268582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 12083127 - 12083036
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    ||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  12083127 gccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtgg 12083036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 12098371 - 12098280
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    ||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  12098371 gccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtgg 12098280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 31480233 - 31480150
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  31480233 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctcgatcaatcgt 31480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 31495379 - 31495296
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  31495379 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctcgatcaatcgt 31495296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 29825677 - 29825718
Alignment:
Q  290 aatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29825677 aatttttatcaataaattccaagaaatttactatgtcatttt 29825718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 29839402 - 29839443
Alignment:
Q  290 aatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29839402 aatttttatcaataaattccaagaaatttactatgtcatttt 29839443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 19213670 - 19213615
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttt 295  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| || |||||||    
T  19213670 tttgctacttgcaccataactgcctgctgtttgcaccctttgttcatgctaatttt 19213615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 31350541 - 31350596
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  31350541 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 31350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 31364341 - 31364396
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  31364341 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 31364396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 15209450 - 15209519
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||| |||||||||||||    
T  15209450 agccagtgaaccggaccggtccaagaccggtccaatcccctttgttcctggccgttggatctagggtttc 15209519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 18800253 - 18800322
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||| |||||||||||||    
T  18800253 agccagtgaaccggaccggttcaagaccggtccaaccccctttgttcctggccgttggatctagggtttc 18800322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 15323522 - 15323577
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||||| |  || |||||||| ||||||||||||    
T  15323522 ttcctggccgtttgatctagggtttcaggactctggatcaatcctgtggctcctgt 15323577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 15503891 - 15503946
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||||| |  || |||||||| ||||||||||||    
T  15503891 ttcctggccgtttgatctagggtttcaggactctggatcaatcctgtggctcctgt 15503946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 33241381 - 33241436
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||||| |  || |||||||| ||||||||||||    
T  33241381 ttcctggccgtttgatctagggtttcaggactctggatcaatcctgtggctcctgt 33241436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 33270725 - 33270780
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||||| |  || |||||||| ||||||||||||    
T  33270725 ttcctggccgtttgatctagggtttcaggactctggatcaatcctgtggctcctgt 33270780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 31480294 - 31480264
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaaga 50  Q
    |||||||||||||||||||||||||||||||    
T  31480294 tagagagagaaaggggagtgaaaaatgaaga 31480264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 31495440 - 31495410
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaaga 50  Q
    |||||||||||||||||||||||||||||||    
T  31495440 tagagagagaaaggggagtgaaaaatgaaga 31495410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 8090 - 7946
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8090 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 7991  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  7990 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 18365985 - 18365841
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18365985 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 18365886  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  18365885 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 18365841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 18381024 - 18380880
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18381024 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 18380925  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  18380924 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 18380880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 69 - 260
Target Start/End: Original strand, 34611084 - 34611277
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34611084 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 34611183  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    |||||| || |||||||||||||||||||||||||||||||||||  | |||||| |||||| | ||  ||| ||||||| ||||||| |||||    
T  34611184 tcctgtgcagtctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgttttttttgttttttttgctatttgcaccgtattt 34611277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 69 - 260
Target Start/End: Original strand, 34626201 - 34626394
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34626201 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 34626300  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    |||||| || |||||||||||||||||||||||||||||||||||  | |||||| |||||| | ||  ||| ||||||| ||||||| |||||    
T  34626301 tcctgtgcagtctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgttttttttgttttttttgctatttgcaccgtattt 34626394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 40464087 - 40463945
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40464087 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 40463988  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  40463987 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggc 40463945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 40478978 - 40478836
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40478978 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 40478879  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  40478878 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggc 40478836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 37210937 - 37211081
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37210937 ttatatagccagtgaaccggaccggtttattttcggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 37211036  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  37211037 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 37211081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 69 - 260
Target Start/End: Complemental strand, 5339946 - 5339752
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5339946 ttatatagccagtgaaccggaccggtttatttccggtccagtcccctttgattcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 5339847  T
Q  168 ctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt--tgttcttttacgtttctgtttatttgtttgctacttgcaccatattt 260  Q
    ||||||| || |||||||||||||||||||||||||||||||||||  | |||||| |||||| | | | ||| ||||||| ||||||| |||||    
T  5339846 ctcctgtgcagtctgagttttgagtgtgggctttgggtttgggcttagttttctttcacgtttttttgtttttttttgctatttgcaccgtattt 5339752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 25638644 - 25638499
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25638644 ttatatagccagtgaaccggaccggtttatttccggtccagtcccctttgattcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 25638545  T
Q  168 ctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    ||||||| || |||||||||||||||||||||||||||||||||||    
T  25638544 ctcctgtgcagtctgagttttgagtgtgggctttgggtttgggctt 25638499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 13433017 - 13432695
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  13433017 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 13432918  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgt-gggctttgggttt 207  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||  | ||  ||  ||| | |||||||||||||    
T  13432917 tcccctttgattcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtggctcctgtgcatccggaccttgtagttttgggctttgggttt 13432818  T
Q  208 gggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaa 305  Q
    |||| | ||   |||| ||||||   |||  || |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13432817 gggcctagtctgctttcacgttt---tttgcttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataaa 13432721  T
Q  306 ttccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||    
T  13432720 ttccaagaaatttactatgtcatttt 13432695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 13443911 - 13443589
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  13443911 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 13443812  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgt-gggctttgggttt 207  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||| ||||||||||||||||||||| ||  | ||  ||  ||| | |||||||||||||    
T  13443811 tcccctttgattcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtggctcctgtgcatccggaccttgtagttttgggctttgggttt 13443712  T
Q  208 gggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaa 305  Q
    |||| | ||   |||| ||||||   |||  || |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  13443711 gggcctagtctgctttcacgttt---tttgcttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataaa 13443615  T
Q  306 ttccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||    
T  13443614 ttccaagaaatttactatgtcatttt 13443589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 75 - 331
Target Start/End: Original strand, 5647506 - 5647761
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | |||||    
T  5647506 agccagtgaaccggaccggtccaagaccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgccccctgt 5647605  T
Q  175 acaatctgagttttgag-tgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
     ||  | ||  ||  || | |||||||||||||||||||| |||  |||| ||||||   |||  || |||||||||||||||||| |||||||||||||    
T  5647606 gcatccggaccttgtagctttgggctttgggtttgggcttagttttctttcacgttt---tttgcttttttgctacttgcaccatacttgcctgctgttt 5647702  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5647703 gcacc-tctgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 5647761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 75 - 331
Target Start/End: Original strand, 5632632 - 5632887
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||| ||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | |||||    
T  5632632 agccagtgaaccggaccggtccaagaccggcccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgccccctgt 5632731  T
Q  175 acaatctgagttttgag-tgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
     ||  | ||  ||  || | |||| ||||||||||||||| |||  |||| ||||||   |||  || |||||||||||||||||| |||||||||||||    
T  5632732 gcatccggaccttgtagctttgggatttgggtttgggcttagttttctttcacgttt---tttgcttttttgctacttgcaccatacttgcctgctgttt 5632828  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5632829 gcacc-tctgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 5632887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 18491082 - 18490917
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||| ||||||||||||||  |   ||||||||     
T  18491082 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccaatgaaccggaccggtccagaaccggtccat 18490983  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18490982 tcccctttgattcctggccgtttgatctagggtttcaggatcctagatcaatcgtgtggctcctgt 18490917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 18506397 - 18506232
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||| ||||||||||||||  |   ||||||||     
T  18506397 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccaatgaaccggaccggtccagaaccggtccat 18506298  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18506297 tcccctttgattcctggccgtttgatctagggtttcaggatcctagatcaatcgtgtggctcctgt 18506232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 18119010 - 18118874
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  18119010 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaatcctggatcaatcatgtggttcctgt 18118912  T
Q  175 acaatc-tgagttttgagtgtgggctttgggtttgggc 211  Q
     ||  | |   |||||||||||||||||||||||||||    
T  18118911 gcatccgtatcttttgagtgtgggctttgggtttgggc 18118874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 18129390 - 18129254
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  18129390 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaatcctggatcaatcatgtggttcctgt 18129292  T
Q  175 acaatc-tgagttttgagtgtgggctttgggtttgggc 211  Q
     ||  | |   |||||||||||||||||||||||||||    
T  18129291 gcatccgtatcttttgagtgtgggctttgggtttgggc 18129254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 6869207 - 6869298
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||||||||||    
T  6869207 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgtcatttt 6869298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 6884331 - 6884422
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || ||||||| | ||||||||||||||||| |||| ||||||||||    
T  6884331 tttgctacttgcaccataattgcctgctgtttgcaccctttgttcatgctaattttcaccaataaattccaagaaaattaccatgtcatttt 6884422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 184 - 331
Target Start/End: Complemental strand, 32597059 - 32596913
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttg 281  Q
    ||||||| | |||||||||||||||||||| || | |||| |||||| | ||| ||| ||||||||||||||||   ||||||||||||||||||| |||    
T  32597059 gttttgactttgggctttgggtttgggcttagtctgttttcacgttttt-tttgtttttttgctacttgcaccac--ttgcctgctgtttgcacccgttg 32596963  T
Q  282 ttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  32596962 ttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 32596913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 37650043 - 37650142
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||||||||||||||||||| || || |||||||| ||||||||||||    
T  37650043 agccagtgaaccggaccggtccagaaccggtccattcccctttgttcctggccgtttgatctagggtttcaggattctggatcaatcatgtggctcctgt 37650142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 24785809 - 24785710
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||  |   |||||||| ||||| ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  24785809 gccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaagatcctggatcaatcgtgtggctcctgt 24785710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 26445228 - 26445107
Alignment:
Q  41 aaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctaggg 140  Q
    |||||||||  ||||||| | ||| || || | |||||||||||||||||||||  |   |||||||||||||  |||||||||||||||||||||||||    
T  26445228 aaaatgaagtaaaccggagctcctccctttttatagccagtgaaccggaccggtccagaaccggtccagtccct-ttgttcctggccgtttgatctaggg 26445130  T
Q  141 tttcagaatcctagatcaatcgt 163  Q
    |||||||| ||| ||||||||||    
T  26445129 tttcagaaccctggatcaatcgt 26445107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 30146580 - 30146672
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30146580 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgcttgatctagggtttcagaatcctggatcaatcgtgtgg 30146672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 30161791 - 30161883
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30161791 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgcttgatctagggtttcagaatcctggatcaatcgtgtgg 30161883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 12056206 - 12056107
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||    
T  12056206 agccagcgaaccggaccggtccagt-ccggtccattcccctttgattcctggccgtttgatctagggtttcaaaatcctggatcaatcgtgtggttcctg 12056108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 37726617 - 37726692
Alignment:
Q  100 tccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||    
T  37726617 tccggtccattcccctttgattcctggccgtttgatctagggttccagaatcctggatcaatcgtgtggttcctgt 37726692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 43072813 - 43072911
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| || || ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  43072813 agccagcgaaccggaccggttcaat-ccggtccattctcctttgattcctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctg 43072911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 173
Target Start/End: Original strand, 43088100 - 43088198
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| || || ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  43088100 agccagcgaaccggaccggttcaat-ccggtccattctcctttgattcctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctg 43088198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 3784116 - 3784205
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    |||||| |||||||||||||  |   |||||||| ||||  |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  3784116 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggttttagaatcctggatcaatcgtg 3784205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 3799471 - 3799560
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    |||||| |||||||||||||  |   |||||||| ||||  |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  3799471 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggttttagaatcctggatcaatcgtg 3799560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 33873926 - 33874009
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33873926 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 33874009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 33884829 - 33884912
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33884829 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 33884912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 32586632 - 32586533
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||  |   |||||||| ||||| ||| |||||||||||||||||||||||||||  ||||| |||| ||||||||| ||||||    
T  32586632 gccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaagatcctggatcgatcgtgtggttcctgt 32586533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 32605061 - 32604962
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||  |   |||||||| ||||| ||| |||||||||||||||||||||||||||  ||||| |||| ||||||||| ||||||    
T  32605061 gccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaagatcctggatcgatcgtgtggttcctgt 32604962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 8656007 - 8655897
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  8656007 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 8655908  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  8655907 tgtttgaaccc 8655897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 8670981 - 8670871
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  8670981 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 8670882  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  8670881 tgtttgaaccc 8670871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 37349110 - 37349000
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  37349110 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 37349011  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  37349010 tgtttgaaccc 37349000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 37364159 - 37364049
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  37364159 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 37364060  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  37364059 tgtttgaaccc 37364049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 29972628 - 29972573
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  29972628 ttccaggccgtttgatctagggtttcaggaccctggatcaatcctgtggctcctgt 29972573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 30024015 - 30024070
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  30024015 ttccaggccgtttgatctagggtttcaggaccctggatcaatcctgtggctcctgt 30024070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 30039279 - 30039334
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  30039279 ttccaggccgtttgatctagggtttcaggaccctggatcaatcttgtggctcctgt 30039334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 31816618 - 31816580
Alignment:
Q  293 ttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31816618 ttttatcaataaattccaaggaatttactatgtcatttt 31816580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 331
Target Start/End: Complemental strand, 31831648 - 31831610
Alignment:
Q  293 ttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31831648 ttttatcaataaattccaaggaatttactatgtcatttt 31831610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 29972728 - 29972691
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccgg 57  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  29972728 tagagagagaaaggggagtgaaaaatgaagaaaaccgg 29972691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 30023915 - 30023952
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccgg 57  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30023915 tagagagagaaaggggagtgaaaaatgaagaaaaccgg 30023952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 30039179 - 30039216
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccgg 57  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30039179 tagagagagaaaggggagtgaaaaatgaagaaaaccgg 30039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 37295691 - 37295624
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    |||||||||||||||||||| |   |||||||| | ||| |  |||||||||||||||||||||||||    
T  37295691 gccagtgaaccggaccggttcaagaccggtccaattcccttcattcctggccgtttgatctagggttt 37295624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 37742307 - 37742224
Alignment:
Q  194 tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||| || |||||||||||||||||||||||||| ||||| |||   ||||  |||||||||||||   ||||||||| ||||    
T  37742307 tgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctgtttgcaccatatttctttgctgtttgaaccc 37742224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 277
Target Start/End: Complemental strand, 37776389 - 37776306
Alignment:
Q  194 tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||| || |||||||||||||||||||||||||| ||||| |||   ||||  |||||||||||||   ||||||||| ||||    
T  37776389 tgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctgtttgcaccatatttctttgctgtttgaaccc 37776306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 11544882 - 11544944
Alignment:
Q  81 tgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||| |   |||||||| ||||| | ||||||||||||| ||||||||||||    
T  11544882 tgaaccggaccggttcaagaccggtccaatccccttcgttcctggccgttggatctagggttt 11544944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 11558941 - 11559003
Alignment:
Q  81 tgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||| |   |||||||| ||||| | ||||||||||||| ||||||||||||    
T  11558941 tgaaccggaccggttcaagaccggtccaatccccttcgttcctggccgttggatctagggttt 11559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 16681716 - 16681785
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  16681716 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 16681785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 29892404 - 29892335
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |   ||||||||  | || | ||||||||||||| |||||||||||||    
T  29892404 agccagtgaaccggaccggttcaggaccggtccaacctccttcgttcctggccgttggatctagggtttc 29892335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 4e-69; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 24048369 - 24048225
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24048369 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcccggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 24048270  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  24048269 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 24048225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 28202006 - 28202209
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28202006 agccagtgaaccggaccggttcaggaccggtccaaccccctttgttcctggccgtttgatctagggttccagaatcctagatcaatcgtgtggctcctgt 28202105  T
Q  175 acaatctgagttttgagt-gtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| ||  ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||||||||     
T  28202106 gcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtttga 28202205  T
Q  274 accc 277  Q
    ||||    
T  28202206 accc 28202209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 28217074 - 28217277
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28217074 agccagtgaaccggaccggttcaggaccggtccaaccccctttgttcctggccgtttgatctagggttccagaatcctagatcaatcgtgtggctcctgt 28217173  T
Q  175 acaatctgagttttgagt-gtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| ||  ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||||||||     
T  28217174 gcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtttga 28217273  T
Q  274 accc 277  Q
    ||||    
T  28217274 accc 28217277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 27067343 - 27067435
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27067343 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttgggtttgggc 27067435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 27039004 - 27039096
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27039004 ttcctggccgtttgatctggggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttgggtttgggc 27039096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 331
Target Start/End: Complemental strand, 27619514 - 27619376
Alignment:
Q  194 tgggctttgggtttgggctttg--ttctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgtta 290  Q
    ||||||||||||| |||||| |  ||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||| |||||    
T  27619514 tgggctttgggtt-gggcttagatttcttttcacgtttttgtttattt-tttgctatttgcaccatacttgcctgctgtttgcaccctttattcatgtta 27619417  T
Q  291 atttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  27619416 atttttatcaataaattccaagaaatttaccatgtcatttt 27619376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 194 - 331
Target Start/End: Complemental strand, 27635124 - 27634986
Alignment:
Q  194 tgggctttgggtttgggctttg--ttctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgtta 290  Q
    ||||||||||||| |||||| |  ||||||| |||||| ||||||||| ||||||| |||||||||| |||||||||||||||||||||| ||| |||||    
T  27635124 tgggctttgggtt-gggcttagatttcttttcacgtttttgtttattt-tttgctatttgcaccatacttgcctgctgtttgcaccctttattcatgtta 27635027  T
Q  291 atttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  27635026 atttttatcaataaattccaagaaatttaccatgtcatttt 27634986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 8189172 - 8189081
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  8189172 tttgctacttgcaccatacttgcctgctgttcgcaccctttgttcatgttaatttttatcaataaattccaagaaatttaccatgtcatttt 8189081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 4519811 - 4519976
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgt-agccagtgaaccggaccggtttatttccggtcca 108  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||| | ||| |||||||| |||||||| |   ||||||||    
T  4519811 gagaggaacttagagagagaaaggggagtgaaaagtgaagaaaaccggaacctcttcccttatataagctagtgaaccagaccggttcaagaccggtcca 4519910  T
Q  109 gtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
     |||   |  |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  4519911 atcctgttgattccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 4519976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 4534998 - 4535163
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgt-agccagtgaaccggaccggtttatttccggtcca 108  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||| | ||| |||||||| |||||||| |   ||||||||    
T  4534998 gagaggaacttagagagagaaaggggagtgaaaagtgaagaaaaccggaacctcttcccttatataagctagtgaaccagaccggttcaagaccggtcca 4535097  T
Q  109 gtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
     |||   |  |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  4535098 atcctgttgattccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 4535163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 16668632 - 16668797
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  16668632 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 16668731  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16668732 tcccctttgattcctggccgtttgatctagggtttcaggatcctagatcaatcgtgtggctcctgt 16668797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 10 - 174
Target Start/End: Original strand, 16683914 - 16684079
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||  |||| |||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  16683914 gagaagaacttagagagagaaaggaaagtggaaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 16684013  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16684014 tcccctttgattcctggccgtttgatctagggtttcaggatcctagatcaatcgtgtggctcctgt 16684079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 331
Target Start/End: Complemental strand, 4729503 - 4729356
Alignment:
Q  185 ttttgagtgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgt 282  Q
    ||||||||||||||||| ||||||||||| ||   |||| |||||| |   | ||| |||||||||||||||||| ||||||||||||||||||||| ||    
T  4729503 ttttgagtgtgggctttaggtttgggcttagtctgctttcacgttttttgcttttt-tttgctacttgcaccatacttgcctgctgtttgcacccttcgt 4729405  T
Q  283 tcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    || ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  4729404 tcatgttagtttttatcaataaattccaagaaatttaccacgtcatttt 4729356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 27352047 - 27351897
Alignment:
Q  65 tcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccctt--gttcctggccgtttgatctagggtttcagaatcctagatcaatcg 162  Q
    ||||||||  ||||||||||||||||||||| |   ||||||||  ||||| |  ||||||||||||||||||||||||||||| | ||| |||||||||    
T  27352047 tcccttataaagccagtgaaccggaccggttcaggaccggtccaacccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcg 27351948  T
Q  163 tgtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  27351947 tgtggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 27351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 27364160 - 27364010
Alignment:
Q  65 tcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccctt--gttcctggccgtttgatctagggtttcagaatcctagatcaatcg 162  Q
    ||||||||  ||||||||||||||||||||| |   ||||||||  ||||| |  ||||||||||||||||||||||||||||| | ||| |||||||||    
T  27364160 tcccttataaagccagtgaaccggaccggttcaggaccggtccaacccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcg 27364061  T
Q  163 tgtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  27364060 tgtggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 27364010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 65 - 213
Target Start/End: Complemental strand, 27454503 - 27454353
Alignment:
Q  65 tcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccctt--gttcctggccgtttgatctagggtttcagaatcctagatcaatcg 162  Q
    ||||||||  ||||||||||||||||||||| |   ||||||||  ||||| |  ||||||||||||||||||||||||||||| | ||| |||||||||    
T  27454503 tcccttataaagccagtgaaccggaccggttcaggaccggtccaacccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcg 27454404  T
Q  163 tgtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    ||||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  27454403 tgtggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 27454353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 228
Target Start/End: Complemental strand, 28977833 - 28977679
Alignment:
Q  74 tagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcct 172  Q
    ||||||| |||||||||||||  | | |||||||| ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||| ||| ||||    
T  28977833 tagccagcgaaccggaccggtccagt-ccggtccattcccctttgattcctggccgtttgatccagggtttcagaatcctggatcaatcgtatggttcct 28977735  T
Q  173 gtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgttt 228  Q
    || |||||||||||||| |||| ||||||||| ||||||||| | | ||||||||||    
T  28977734 gtgcaatctgagttttgtgtgttgggctttgg-tttgggcttaggttttttacgttt 28977679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 30970378 - 30970280
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  30970378 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctgt 30970280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26106834 - 26106628
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg--ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcct 172  Q
    |||||| |||||||||||||  | | |||||||| ||||||||   ||||||||||| |||||||||||||||||||||| |||||||||| ||| ||||    
T  26106834 agccagcgaaccggaccggtccagt-ccggtccattccccctttgattcctggccgtctgatctagggtttcagaatcctggatcaatcgtatggttcct 26106736  T
Q  173 gtacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgt 269  Q
    || ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   ||||||    
T  26106735 gtgcaaccggatcttctagtgtattgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgt 26106636  T
Q  270 ttgcaccc 277  Q
    ||| ||||    
T  26106635 ttgaaccc 26106628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 75 - 277
Target Start/End: Complemental strand, 26122066 - 26121860
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg--ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcct 172  Q
    |||||| |||||||||||||  | | |||||||| ||||||||   ||||||||||| |||||||||||||||||||||| |||||||||| ||| ||||    
T  26122066 agccagcgaaccggaccggtccagt-ccggtccattccccctttgattcctggccgtctgatctagggtttcagaatcctggatcaatcgtatggttcct 26121968  T
Q  173 gtacaatctgagttttgagtg---tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgt 269  Q
    || ||| | ||  ||  ||||   ||||| || |||||||||||||||||||||||||| ||||| |||   ||||| |||||||||||||   ||||||    
T  26121967 gtgcaaccggatcttctagtgtattgggcctttggtttgggctttgttcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgt 26121868  T
Q  270 ttgcaccc 277  Q
    ||| ||||    
T  26121867 ttgaaccc 26121860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 16564142 - 16564240
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||| ||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||    
T  16564142 agccagtaaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctgt 16564240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 174
Target Start/End: Original strand, 4453352 - 4453452
Alignment:
Q  74 tagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcct 172  Q
    ||||||| |||||||||||||  | | |||||||| ||||| ||| ||||||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  4453352 tagccagcgaaccggaccggtccagt-ccggtccattcccctttgattcctggccgtttgatccagggtttcagaatcctggatcaatcgtgtggttcct 4453450  T
Q  173 gt 174  Q
    ||    
T  4453451 gt 4453452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 33366501 - 33366439
Alignment:
Q  101 ccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33366501 ccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 33366439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 33377773 - 33377711
Alignment:
Q  101 ccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33377773 ccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 33377711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 16934568 - 16934459
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    ||||||| |||||||||||||||||||||  |   |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| |||||||||||    
T  16934568 cccttatatagccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtg 16934469  T
Q  165 tggctcctgt 174  Q
     | |||||||    
T  16934468 cgtctcctgt 16934459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 16949677 - 16949568
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtg 164  Q
    ||||||| |||||||||||||||||||||  |   |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| |||||||||||    
T  16949677 cccttatatagccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtg 16949578  T
Q  165 tggctcctgt 174  Q
     | |||||||    
T  16949577 cgtctcctgt 16949568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 13514699 - 13514616
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  13514699 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 13514616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 13525602 - 13525519
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  13525602 agtgaaccggaccggtccaagaccggtccagtccct-ttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 13525519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 18939626 - 18939695
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  18939626 agccagtgaaccggaccggttcaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 18939695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 26913105 - 26913173
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||||||||  |   |||||||||||||| | ||||||||||||| ||||||||||||    
T  26913105 agccagtgaaccggaccggtccaagaccggtccagtccccttcgttcctggccgttggatctagggttt 26913173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 26930392 - 26930460
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||||||||  |   |||||||||||||| | ||||||||||||| ||||||||||||    
T  26930392 agccagtgaaccggaccggtccaagaccggtccagtccccttcgttcctggccgttggatctagggttt 26930460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 12616551 - 12616618
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtt 142  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||    
T  12616551 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtt 12616618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 18816013 - 18815946
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtt 142  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||    
T  18816013 agccagtgaaccggaccggtccaaaaccggtccaatccccttcgttcctggccgttggatctagggtt 18815946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 20155261 - 20155327
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtt 142  Q
    |||||||||||||||||||| |   |||||||| ||||| |   |||||||||||||||||||||||    
T  20155261 gccagtgaaccggaccggttcaaaaccggtccaatccccttcaatcctggccgtttgatctagggtt 20155327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 22177571 - 22177505
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtt 142  Q
    |||||||||||||||||||| |   |||||||| ||||| |   |||||||||||||||||||||||    
T  22177571 gccagtgaaccggaccggttcaaaaccggtccaatccccttcaatcctggccgtttgatctagggtt 22177505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 16346216 - 16346151
Alignment:
Q  79 agtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  16346216 agtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 16346151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Original strand, 16997469 - 16997497
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  16997469 tagagagagaaaggggagtgaaaaatgaa 16997497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 34454792 - 34454764
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  34454792 tagagagagaaaggggagtgaaaaatgaa 34454764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 34469080 - 34469052
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaa 48  Q
    |||||||||||||||||||||||||||||    
T  34469080 tagagagagaaaggggagtgaaaaatgaa 34469052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 4e-69; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 69 - 213
Target Start/End: Complemental strand, 9355687 - 9355543
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9355687 ttatatagccagtgaaccggaccggtttatttccggtccagtcccccttgttcttggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 9355588  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  9355587 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 9355543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 27213964 - 27214108
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27213964 ttatatagccagtgaaccgggccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 27214063  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  27214064 tcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 27214108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 16160312 - 16160634
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  16160312 gagaagaatttagagagagaaaggaaagtgggaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 16160411  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  16160412 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 16160509  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| |  ||  || |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  16160510 tgggctcaagtttcttttacgttttt--ttgcttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 16160607  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  16160608 attccaagaaatttaccatgtcatttt 16160634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 16171213 - 16171535
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  16171213 gagaagaatttagagagagaaaggaaagtgggaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 16171312  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttg-agtgt-gggctttgggtt 206  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||| |||||| || ||||    ||| ||| | ||||||||| ||    
T  16171313 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgtgca-tctggaccttgtagttttgggctttgg-tt 16171410  T
Q  207 tgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||     ||||||||||||| |  ||  || |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  16171411 tgggctcaagtttcttttacgttttt--ttgcttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 16171508  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  16171509 attccaagaaatttaccatgtcatttt 16171535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 27813426 - 27813748
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  27813426 gagaagaatttagagagagaaaggaaagtgggaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 27813525  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgag----ttttgagtgtgggctttggg 204  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||  | ||     || || || ||||| ||||     
T  27813526 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggctcctgtgcatccggacccctttgtgtgtttgggccttgg- 27813624  T
Q  205 tttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||| | ||||  ||   |||||   | ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  27813625 tttgggcctcgttcagtttattttct---tgtttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 27813721  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  27813722 attccaagaaatttaccatgtcatttt 27813748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 10 - 331
Target Start/End: Original strand, 27798337 - 27798659
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| ||| |||||||||||||||  ||||  ||||||    ||||||  ||||||| ||| | |||||||||||||||||||||  |   ||||||||     
T  27798337 gagaagaatttagagagagaaaggaaagtgggaaatgatttaaaccggtcccccttcacttttatagccagtgaaccggaccggtccagaaccggtccat 27798436  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgag----ttttgagtgtgggctttggg 204  Q
    ||||| ||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||| ||  | ||     || || || ||||| ||||     
T  27798437 tcccctttgattcctggccgtttggtctagggtttcaggatcctggatcaatcgtgtggctcctgtgcatccggacccctttgtgtgtttgggccttgg- 27798535  T
Q  205 tttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataa 304  Q
    ||||||| | ||||  ||   |||||   | ||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  27798536 tttgggcctcgttcagtttattttct---tgtttttttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataa 27798632  T
Q  305 attccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||| ||||||||||    
T  27798633 attccaagaaatttaccatgtcatttt 27798659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 331
Target Start/End: Complemental strand, 16860260 - 16860169
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  16860260 tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttaccatgtcatttt 16860169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 250994 - 250837
Alignment:
Q  17 acttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccct 116  Q
    |||||||||||||||||  |||| |||||| ||| ||||||| | ||||||||||| ||||||| |||||||||||||  | | |||||||| ||||| |    
T  250994 acttagagagagaaaggaaagtggaaaatggagaaaaccggagctccttcccttatatagccagcgaaccggaccggtccaat-ccggtccattcccctt 250896  T
Q  117 tg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    || |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  250895 tgattcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtggctcctgt 250837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 266524 - 266367
Alignment:
Q  17 acttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccct 116  Q
    |||||||||||||||||  |||| |||||| ||| ||||||| | ||||||||||| ||||||| |||||||||||||  | | |||||||| ||||| |    
T  266524 acttagagagagaaaggaaagtggaaaatggagaaaaccggagctccttcccttatatagccagcgaaccggaccggtccaat-ccggtccattcccctt 266426  T
Q  117 tg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    || |||||||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  266425 tgattcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtggctcctgt 266367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 19552167 - 19552410
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgt 119  Q
    |||||||||||||||||||| ||||||||   ||||||  ||| |    |||| |||||||||||||||||||||  |   |||||||| ||||| ||||    
T  19552167 tagagagagaaaggggagtggaaaatgaaataaaccggtccccttgtgtttatatagccagtgaaccggaccggtccaggaccggtccaatcccctttgt 19552266  T
Q  120 tcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtac-aatctgagttttgagtgtgggctttgggtttgggctttgttc 218  Q
    |||||||||||||| |||||||||||| | ||| ||||||||||||||   ||||||    ||| ||||||  | |||||||||||||||||||| ||||    
T  19552267 tcctggccgtttgaactagggtttcaggaccctggatcaatcgtgtggtctctgtacttccctgcgttttggctttgggctttgggtttgggcttagttc 19552366  T
Q  219 -ttttacgtttctgtttatttgt-ttgctacttgcaccatattt 260  Q
     |||||||||| |  |||||| | |||||| |||||||||||||    
T  19552367 tttttacgttttttgttatttttcttgctatttgcaccatattt 19552410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 37920319 - 37920464
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttg 281  Q
    ||||||| | |||||||||||||||||||| || | |||| |||||| |  || ||| ||||||||||||||||   ||||||||||||||||||| |||    
T  37920319 gttttgactttgggctttgggtttgggcttagtctgttttcacgttttt--ttgtttttttgctacttgcaccac--ttgcctgctgtttgcacccgttg 37920414  T
Q  282 ttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  37920415 ttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 37920464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 184 - 331
Target Start/End: Original strand, 37935257 - 37935402
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgt-tctttt-acgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttg 281  Q
    ||||||| | |||||||||||||||||||| || | |||| |||||| |  || ||| ||||||||||||||||   ||||||||||||||||||| |||    
T  37935257 gttttgactttgggctttgggtttgggcttagtctgttttcacgttttt--ttgtttttttgctacttgcaccac--ttgcctgctgtttgcacccgttg 37935352  T
Q  282 ttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||| || ||||||||| |||||||||||||||||||||||| ||||||||    
T  37935353 ttcatgctaatttttaccaataaattccaagaaatttactacgtcatttt 37935402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 31472794 - 31472695
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  31472794 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggctcctg 31472696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 5800210 - 5800336
Alignment:
Q  17 acttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtccccct 116  Q
    |||||||||||||||||  ||||||||||| | | ||||||| | | ||||||||| ||||||| |||||||||||||| |  ||||||||| ||||| |    
T  5800210 acttagagagagaaaggaaagtgaaaaatggaaaaaaccggagctctttcccttatatagccagcgaaccggaccggttca-atccggtccattcccctt 5800308  T
Q  117 tg-ttcctggccgtttgatctagggttt 143  Q
    || |||||||||||||||||||||||||    
T  5800309 tgattcctggccgtttgatctagggttt 5800336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 31870828 - 31870920
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31870828 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtgg 31870920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 31886021 - 31886113
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31886021 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtgg 31886113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 37369697 - 37369796
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37369697 agccagcgaaccggaccggtccagt-ccggtccattcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggttcctg 37369795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 37387531 - 37387630
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  37387531 agccagcgaaccggaccggtccagt-ccggtccattcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggttcctg 37387629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 34801416 - 34801317
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||  |   |||||||| ||||| ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  34801416 gccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaagatcctggatcaatcgtgtggctcctgt 34801317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 12581416 - 12581474
Alignment:
Q  105 tccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12581416 tccagtcccttttgttcctggccgtttgatctagggtttcagaatcctggatcaatcgt 12581474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 12595408 - 12595466
Alignment:
Q  105 tccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12595408 tccagtcccttttgttcctggccgtttgatctagggtttcagaatcctggatcaatcgt 12595466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 13927035 - 13926947
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||| |||||||||||||  |   |||||||| ||||  |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13927035 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggttttagaatcctggatcaatcgt 13926947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 13942231 - 13942143
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||| |||||||||||||  |   |||||||| ||||  |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13942231 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggttttagaatcctggatcaatcgt 13942143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 22918592 - 22918493
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | | |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  22918592 agccagcgaaccggaccggtccagt-ccggtccattccccttcgattcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctg 22918494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 22931702 - 22931603
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | | |||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  22931702 agccagcgaaccggaccggtccagt-ccggtccattccccttcgattcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggctcctg 22931604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 19406881 - 19406826
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  19406881 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 19406826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 19421881 - 19421826
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  19421881 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 19421826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 173
Target Start/End: Complemental strand, 34183558 - 34183460
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| || || ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  34183558 agccagcgaaccggaccggtccaat-ccggtccattctcctttgattcctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctg 34183460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 21667777 - 21667667
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||  ||||    
T  21667777 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctctgc 21667678  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  21667677 tgtttgaaccc 21667667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 21682778 - 21682668
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| || | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||  ||||    
T  21682778 ctcctgtgcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctctgc 21682679  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  21682678 tgtttgaaccc 21682668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 277
Target Start/End: Original strand, 34281672 - 34281755
Alignment:
Q  194 tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||| || |||||||||||||||||||||||||| |||||||||   ||||| |||||||||||||   ||||||||| ||||    
T  34281672 tgggcctttggtttgggctttgttcttttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttgaaccc 34281755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 37676266 - 37676211
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  37676266 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 37676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 37691530 - 37691475
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  37691530 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 37691475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 37706795 - 37706740
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  37706795 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 37706740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 16962664 - 16962520
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtccccctt 117  Q
    ||||||||||||||   | || |||||||| | ||||||| | ||||||||| | || ||||| |||||||||||||  | | |||||||| || || ||    
T  16962664 ttagagagagaaagccaaatggaaaatgaaaa-aaccggagctccttcccttttataagccagcgaaccggaccggtccagt-ccggtccattctccttt 16962567  T
Q  118 g-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    | |||||||||||||||||||||||||||| ||||| ||||||||||    
T  16962566 gattcctggccgtttgatctagggtttcaggatccttgatcaatcgt 16962520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 27771976 - 27772069
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | ||||| || ||||||||||||||| |||||||||| |||||||||   ||||| |||||||||||||   ||||||||| ||||    
T  27771976 gttttgaatatgggcctttggtttgggctttgtttttttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttgaaccc 27772069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Original strand, 27793117 - 27793210
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | ||||| || ||||||||||||||| |||||||||| |||||||||   ||||| |||||||||||||   ||||||||| ||||    
T  27793117 gttttgaatatgggcctttggtttgggctttgtttttttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttgaaccc 27793210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 19558376 - 19558486
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| |  | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  19558376 ctcctgtgcaatctgagttttgtgaattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 19558475  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  19558476 tgtttgaaccc 19558486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 18139876 - 18139807
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| ||||||||||||||| ||||| |||||||    
T  18139876 agccagtgaaccggaccggtccaagaccggtccaatcccctttgttcctggccgttggatcttgggtttc 18139807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 28876697 - 28876766
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  28876697 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 28876766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 28891907 - 28891976
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  28891907 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 28891976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 27115477 - 27115521
Alignment:
Q  194 tgggctttgggtttgggctttgttcttttacgtttctgtttattt 238  Q
    ||||| || |||||||||||||||||||||||||| |||||||||    
T  27115477 tgggcctttggtttgggctttgttcttttacgtttttgtttattt 27115521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 238
Target Start/End: Original strand, 27126442 - 27126486
Alignment:
Q  194 tgggctttgggtttgggctttgttcttttacgtttctgtttattt 238  Q
    ||||| || |||||||||||||||||||||||||| |||||||||    
T  27126442 tgggcctttggtttgggctttgttcttttacgtttttgtttattt 27126486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 28274720 - 28274788
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    |||||| |||||||||||||  |   |||||||||||||| | ||||||||||||| ||||||||||||    
T  28274720 agccagcgaaccggaccggtccaagaccggtccagtccccttcgttcctggccgttggatctagggttt 28274788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 20830604 - 20830673
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||  | ||||||||||||| |||||||||||||    
T  20830604 agccagtgaaccggaccggtccaagaccggtccaatccctttcgttcctggccgttggatctagggtttc 20830673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 28270491 - 28270422
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  28270491 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 28270422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 37871383 - 37871314
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  37871383 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 37871314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 17259363 - 17259431
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| ||||||||||||    
T  17259363 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggttt 17259431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 144
Target Start/End: Complemental strand, 32237557 - 32237489
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    |||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  32237557 gccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 32237489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 9e-61; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 16558775 - 16558633
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16558775 ttatatagccagtgaaccggaccggtttatttccggtctagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 16558676  T
Q  169 tcctgtacaatctgagttttgagtgtgggctttgggtttgggc 211  Q
    |||||| |||||||  |||||||| ||||||||||||||||||    
T  16558675 tcctgttcaatctgttttttgagtatgggctttgggtttgggc 16558633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 75 - 331
Target Start/End: Original strand, 36507684 - 36507941
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | |||||    
T  36507684 agccagtgaaccggaccggtccaagaccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgccccctgt 36507783  T
Q  175 acaatctgagttttgag-tgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
     ||  | ||  ||  || | |||||||||||||||||||| |||  |||| |||||| |  |  ||| |||||||||||||||||| |||||||||||||    
T  36507784 gcatccggaccttgtagctttgggctttgggtttgggcttagttttctttcacgttttt--tgctttttttgctacttgcaccatacttgcctgctgttt 36507881  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36507882 gcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 36507941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 75 - 331
Target Start/End: Original strand, 48094726 - 48094983
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  |   |||||||||||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||  | | |||||    
T  48094726 agccagtgaaccggaccggtccaagaccggtccagtcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgtacgccccctgt 48094825  T
Q  175 acaatctgagttttgag-tgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgttt 271  Q
     ||  | ||  ||  || | |||||||||||||||||||| |||  |||| |||||| |  ||  || |||||||||||||||||| |||||||||||||    
T  48094826 gcatccggaccttgtagctttgggctttgggtttgggcttagttttctttcacgttttt--ttgcttttttgctacttgcaccatacttgcctgctgttt 48094923  T
Q  272 gcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48094924 gcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 48094983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 9079422 - 9079513
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  9079422 tttgctacttgcaccatacttgcctactgtttgcaccctctgttcatgttaatttttatcaataaattccaagaaatttactatatcatttt 9079513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 10935895 - 10935986
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  10935895 tttgctacttgcaccatacttgcctactgtttgcaccctctgttcatgttaatttttatcaataaattccaagaaatttactatatcatttt 10935986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 10955086 - 10955177
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  10955086 tttgctacttgcaccatacttgcctactgtttgcaccctctgttcatgttaatttttatcaataaattccaagaaatttactatatcatttt 10955177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 47201505 - 47201604
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  47201505 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 47201603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 212
Target Start/End: Original strand, 14894257 - 14894395
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgtt-cctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||  | | |||||||| ||||| | ||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||    
T  14894257 agccagcgaaccggaccggtccagt-ccggtccattccccttcgtttcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctg 14894355  T
Q  174 tacaatctga-gttttgagtgtgggctttgggtttgggct 212  Q
    | ||| | ||  ||||  || |||||||||||||||||||    
T  14894356 tgcaaccggatcttttaggtttgggctttgggtttgggct 14894395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 30727732 - 30727658
Alignment:
Q  101 ccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||| ||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  30727732 ccggtccattcccctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtatggttcctgt 30727658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 13767574 - 13767486
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||| |||||||||||||  |   |||||||| ||||  |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13767574 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggttttagaatcctggatcaatcgt 13767486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 331
Target Start/End: Complemental strand, 14414123 - 14414082
Alignment:
Q  290 aatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  14414123 aatttttatcaataaattccaagaaatttactatgtcatttt 14414082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 41783727 - 41783672
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||    
T  41783727 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgcgtggctcctgt 41783672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 41798995 - 41798940
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||    
T  41798995 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgcgtggctcctgt 41798940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 14689542 - 14689397
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  | || |  |||||||||||| |||||||||||||  |  ||| ||||||||    | |||||||    
T  14689542 agccagtgaaccggaccggttcaggaccggtccaacctccttcattcctggccgttggatctagggtttcttac-cctggatcaatccaacgtctcctgt 14689444  T
Q  175 acaatctgagttttgagtgt-gggctttgggtttgggctttgttctt 220  Q
     |||||||||||||| |||| ||||||| ||||||||||| ||||||    
T  14689443 gcaatctgagttttgtgtgttgggctttaggtttgggcttagttctt 14689397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 18292622 - 18292691
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  18292622 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 18292691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 21480599 - 21480668
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  21480599 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 21480668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 36763982 - 36763887
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | |||||||||||||||||||| |  |||||| |||||| || ||||||   ||||| |||||||||||||   ||||||||| ||||    
T  36763982 gttttgaatatgggctttgggtttgggcttaggtttctttcacgtttttgcttattttcctgctatttgcaccatatttctttgctgtttgaaccc 36763887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 2504 - 2707
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2504 agccagtgaaccggaccggttcaggaccggtccaaccccctttgttcctggccgtttgatctagggttccagaatcctagatcaatcgtgtggctcctgt 2603  T
Q  175 acaatctgagttttgagt-gtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| ||  ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||||||||     
T  2604 gcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtttga 2703  T
Q  274 accc 277  Q
    ||||    
T  2704 accc 2707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 17572 - 17775
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17572 agccagtgaaccggaccggttcaggaccggtccaaccccctttgttcctggccgtttgatctagggttccagaatcctagatcaatcgtgtggctcctgt 17671  T
Q  175 acaatctgagttttgagt-gtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| ||  ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||||||||     
T  17672 gcaatctgagttttgtgtattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgctgtttga 17771  T
Q  274 accc 277  Q
    ||||    
T  17772 accc 17775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 89; Significance: 7e-43; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 54827962 - 54828157
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtccccctt 117  Q
    ||||||||||||||||||||| ||||||||   ||||||  | ||||| ||| | || ||||| |||||||||||||  | | ||||||||  |  | ||    
T  54827962 ttagagagagaaaggggagtggaaaatgaaataaaccggtgctccttcacttttataagccagcgaaccggaccggtccagt-ccggtccatccttcttt 54828060  T
Q  118 g-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  54828061 gattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttgggtttgggctt 54828157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 213
Target Start/End: Original strand, 54843189 - 54843384
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtccccctt 117  Q
    ||||||||||||||||||||| ||||||||   ||||||  | ||||| ||| | || ||||| |||||||||||||  | | ||||||||  |  | ||    
T  54843189 ttagagagagaaaggggagtggaaaatgaaataaaccggtgctccttcacttttataagccagcgaaccggaccggtccagt-ccggtccatccttcttt 54843287  T
Q  118 g-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtacaatctgagttttgagtgtgggctttgggtttgggctt 213  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  54843288 gattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggctcctgtgcaatctgagttttgagtgtgggctttaggtttgggctt 54843384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 20328930 - 20328765
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||| |||| |||||| | | ||||||| | ||| ||||||| |||||||||||||||||||||  |   ||||||||     
T  20328930 gagaagaacttagagagagaaagggaagtggaaaatggaaaaaaccggagctcctccccttatatagccagtgaaccggaccggtccaggaccggtccat 20328831  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20328830 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggctcctgt 20328765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 174
Target Start/End: Complemental strand, 20335952 - 20335787
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||||||||||||||||||| |||| |||||| | | ||||||| | ||| ||||||| |||||||||||||||||||||  |   ||||||||     
T  20335952 gagaagaacttagagagagaaagggaagtggaaaatggaaaaaaccggagctcctccccttatatagccagtgaaccggaccggtccaggaccggtccat 20335853  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20335852 tcccctttgattcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggctcctgt 20335787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 5000807 - 5000898
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5000807 tttgctacttgcaccatacttgcctactgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 5000898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 5015873 - 5015964
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5015873 tttgctacttgcaccatacttgcctactgtttgcaccctttgttcatgttaatttttatcaataaattccaagaaatttactatgtcatttt 5015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 14728966 - 14729110
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgta-gccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    ||||||||||||||||||||||||||||||| ||||||    ||||| ||| | || |||||||||||||||||||  |   |||||||||||||  |||    
T  14728966 tagagagagaaaggggagtgaaaaatgaagaaaaccggtgttccttcacttttataagccagtgaaccggaccggtccaagaccggtccagtcccttttg 14729065  T
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  14729066 ttcctggccgtttgatctagggtttcagaatcctggatcaatcgt 14729110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 66 - 213
Target Start/End: Complemental strand, 24464220 - 24464071
Alignment:
Q  66 cccttatgtagccagtgaaccggaccggtttatttccggtcc-agtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||||  ||||||||||||||||||||| |   ||||||| |  |||||||| |||||||||||||||||||||||||||| | ||| ||||||||||    
T  24464220 cccttataaagccagtgaaccggaccggttcaggaccggtcccaaccccccttggttcctggccgtttgatctagggtttcaggaccctggatcaatcgt 24464121  T
Q  164 gtggctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctt 213  Q
    |||| |||||| |||||||||||||| ||| ||||||||||||||||||||    
T  24464120 gtggttcctgtgcaatctgagttttg-gtgttgggctttgggtttgggctt 24464071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 36320729 - 36320593
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||    
T  36320729 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggtccctgt 36320631  T
Q  175 acaat-ctgagttttgagtgtgggctttgggtttgggc 211  Q
     |  | ||| ||||||||| |||||||| |||||||||    
T  36320630 gctttcctgtgttttgagtatgggctttaggtttgggc 36320593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 36334938 - 36334802
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||    
T  36334938 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggtccctgt 36334840  T
Q  175 acaat-ctgagttttgagtgtgggctttgggtttgggc 211  Q
     |  | ||| ||||||||| |||||||| |||||||||    
T  36334839 gctttcctgtgttttgagtatgggctttaggtttgggc 36334802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 762517 - 762425
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    ||||||||||||||||||||  |   |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  762517 agccagtgaaccggaccggtccaagaccggtccagtcccctttgttcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtgg 762425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 211
Target Start/End: Complemental strand, 36350028 - 36349892
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||| |||||||  | | |||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||  |||||    
T  36350028 agccagtgaaccagaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctaggatttcagaatcctggatcaatcgtgtggtccctgt 36349930  T
Q  175 acaat-ctgagttttgagtgtgggctttgggtttgggc 211  Q
     |  | ||| ||||||||| |||||||| |||||||||    
T  36349929 gctttcctgtgttttgagtatgggctttaggtttgggc 36349892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 20 - 163
Target Start/End: Original strand, 48916806 - 48916950
Alignment:
Q  20 tagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtcca-gtcccccttg 118  Q
    ||||||||||||||  ||||||||||| | | ||||||| ||| ||||||||| ||||| |||||||||||||||  |   ||||||||  ||||  |||    
T  48916806 tagagagagaaaggaaagtgaaaaatggaaaaaaccggagccctttcccttatatagcccgtgaaccggaccggtccagaaccggtccatttcccttttg 48916905  T
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||    
T  48916906 ttcctggccgtttgatctagggttttaggatcctggatcaatcgt 48916950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 18791030 - 18790931
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  18791030 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctg 18790932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 18805658 - 18805559
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  18805658 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttaggatcctggatcaatcgtgtggctcctg 18805560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 6564402 - 6564604
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  | || |  |||||||||||| |||||||||||||  |  ||| ||||||||    | |||||||    
T  6564402 agccagtgaaccggaccggttcaggaccggtccaacctccttcattcctggccgttggatctagggtttcttac-cctggatcaatccaacgtctcctgt 6564500  T
Q  175 acaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| |||| |||| || |||||||||||||||| ||||||||| |||||||||   ||||| |||||||||||||   |||||||||     
T  6564501 gcaatctgagttttgtgtgttgggcctttggtttgggctttgttcatttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttga 6564600  T
Q  274 accc 277  Q
    ||||    
T  6564601 accc 6564604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 75 - 277
Target Start/End: Original strand, 6579436 - 6579638
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||| |   ||||||||  | || |  |||||||||||| |||||||||||||  |  ||| ||||||||    | |||||||    
T  6579436 agccagtgaaccggaccggttcaggaccggtccaacctccttcattcctggccgttggatctagggtttcttac-cctggatcaatccaacgtctcctgt 6579534  T
Q  175 acaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgc 273  Q
     |||||||||||||| |||| |||| || |||||||||||||||| ||||||||| |||||||||   ||||| |||||||||||||   |||||||||     
T  6579535 gcaatctgagttttgtgtgttgggcctttggtttgggctttgttcatttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttga 6579634  T
Q  274 accc 277  Q
    ||||    
T  6579635 accc 6579638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 30748321 - 30748420
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  30748321 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 30748419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 30763626 - 30763725
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  30763626 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 30763724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 33664205 - 33664106
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  33664205 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 33664107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 33683017 - 33682918
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctg 173  Q
    |||||| |||||||||||||| | | |||||||| ||||| ||| ||||||||||||||||||||||||| |  ||||| ||||||||||||||||||||    
T  33683017 agccagcgaaccggaccggttcaat-ccggtccattcccctttgattcctggccgtttgatctagggttttatgatcctggatcaatcgtgtggctcctg 33682919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 4564960 - 4564872
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgt 163  Q
    |||||| |||||||||||||  |   |||||||| ||||  ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  4564960 agccagcgaaccggaccggtccaagaccggtccaatcccttttgttcctggccgtttgatctagggtttcagaaccctggatcaatcgt 4564872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 19367842 - 19367897
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||    
T  19367842 ttcctggccgtttgatctagggtttcaggatcctggatcaatcgtgtggttcctgt 19367897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 290 - 331
Target Start/End: Original strand, 3912083 - 3912124
Alignment:
Q  290 aatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  3912083 aatttttatcaataaattccaagaaatttactatgtcatttt 3912124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 277
Target Start/End: Complemental strand, 1501924 - 1501831
Alignment:
Q  184 gttttgagtgtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccc 277  Q
    ||||||| | ||||| || ||||||||||||||| |||||||||| |||||||||   ||||| |||||||||||||   ||||||||| ||||    
T  1501924 gttttgaatatgggcctttggtttgggctttgtttttttacgtttttgtttattttcctgctatttgcaccatatttctttgctgtttgaaccc 1501831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 9480404 - 9480279
Alignment:
Q  19 ttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttg 118  Q
    |||||||||||||||  | | ||||||||| | ||||||| | |||||| || | |||||||||||||||||||||  |   |||||||| || || |      
T  9480404 ttagagagagaaaggaaactaaaaaatgaaaaaaaccggagctccttcctttttatagccagtgaaccggaccggtccaggaccggtccaatctccttca 9480305  T
Q  119 ttcctggccgtttgatctagggtttc 144  Q
    |||||||||||| |||||||||||||    
T  9480304 ttcctggccgttggatctagggtttc 9480279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Original strand, 5704407 - 5704462
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| | ||| |||||||| ||||||||||||    
T  5704407 ttccaggccgtttgatctagggtttcaggaccctggatcaatcctgtggctcctgt 5704462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 40096155 - 40096045
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| |  | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  40096155 ctcctgtgcaatctgagttttgtgaattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 40096056  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  40096055 tgtttgaaccc 40096045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 40111166 - 40111056
Alignment:
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    ||||||| |||||||||||||| |  | |||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   |||    
T  40111166 ctcctgtgcaatctgagttttgtgaattgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttgc 40111067  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  40111066 tgtttgaaccc 40111056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 19640589 - 19640520
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| | ||||||||||||| |||||||||||||    
T  19640589 agccagtgaaccggaccggtccaagaccggtccaatccccttcgttcctggccgttggatctagggtttc 19640520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 22112628 - 22112559
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||| |   ||||||||  |||| ||||||||||||||| |||| ||||||||    
T  22112628 agccagtgaaccggaccggttcaagaccggtccaaccccctttgttcctggccgttggatccagggtttc 22112559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 14093224 - 14093334
Alignment:
Q  168 ctcctgtacaatctgag--ttttgagtgtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctg 265  Q
    ||||||| |||||||||  |||||| | ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   ||    
T  14093224 ctcctgtgcaatctgagctttttgaat-tgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttg 14093322  T
Q  266 ctgtttgcaccc 277  Q
    ||||||| ||||    
T  14093323 ctgtttgaaccc 14093334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 14108325 - 14108435
Alignment:
Q  168 ctcctgtacaatctgag--ttttgagtgtgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctg 265  Q
    ||||||| |||||||||  |||||| | ||||| || ||||||||||||| |||||||||||| ||||| |||   ||||| |||||||||||||   ||    
T  14108325 ctcctgtgcaatctgagctttttgaat-tgggcctttggtttgggctttgatcttttacgtttttgtttgttttcctgctatttgcaccatatttctttg 14108423  T
Q  266 ctgtttgcaccc 277  Q
    ||||||| ||||    
T  14108424 ctgtttgaaccc 14108435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 9248818 - 9248749
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  9248818 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 9248749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 18028748 - 18028679
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| |||||||||||||    
T  18028748 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggtttc 18028679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 34854817 - 34854886
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    ||||||||||||||||||||  |   |||||||| ||||  | ||||||||||||| |||||||||||||    
T  34854817 agccagtgaaccggaccggtccaagaccggtccaatccctttcgttcctggccgttggatctagggtttc 34854886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 15386433 - 15386501
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||||||||  |   |||||||| ||||| |  |||||||||||| ||||||||||||    
T  15386433 agccagtgaaccggaccggtccaagaccggtccaatccccttcattcctggccgttggatctagggttt 15386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 174
Target Start/End: Complemental strand, 3543 - 3438
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  3543 ttatatagccagtgaaccggaccggtttatttccggtccagtccccttcgttcctggccgtttgatctagggtttcagaaccctggatcaatcctgtggc 3444  T
Q  169 tcctgt 174  Q
    ||||||    
T  3443 tcctgt 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 240 - 331
Target Start/End: Original strand, 3120 - 3211
Alignment:
Q  240 tttgctacttgcaccatatttgcctgctgtttgcaccctttgttcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  3120 tttgctacttgcaccatacttgcctgctgtttgcaccctttgttcatgttaatttttgtcaataaattccaagaaatttaccatgtcatttt 3211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1816 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold1816
Description:

Target: scaffold1816; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 10 - 176
Target Start/End: Complemental strand, 613 - 446
Alignment:
Q  10 gagatgaacttagagagagaaaggggagtgaaaaatgaagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccag 109  Q
    |||| |||| ||||||||||||||| ||||||||||| | | |||||||   ||| ||||||| |||||||||||||||||||||  |   ||||||||     
T  613 gagaagaacgtagagagagaaagggaagtgaaaaatggaaaaaaccggagatcctccccttatatagccagtgaaccggaccggtccaggaccggtccat 514  T
Q  110 tcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgtac 176  Q
    || || ||| |||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  513 tctcctttgattcctggccgtttgatctagggtttcagaatcctggatcaatcgtgtggtccctgtac 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1648 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1648
Description:

Target: scaffold1648; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 331
Target Start/End: Complemental strand, 764 - 617
Alignment:
Q  185 ttttgagtgtgggctttgggtttgggctttgtt--cttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgctgtttgcaccctttgt 282  Q
    ||||||||||||||||| ||||||||||| ||   |||| |||||| |   | ||| |||||||||||||||||| ||||||||||||||||||||| ||    
T  764 ttttgagtgtgggctttaggtttgggcttagtctgctttcacgttttttgcttttt-tttgctacttgcaccatacttgcctgctgtttgcacccttcgt 666  T
Q  283 tcgtgttaatttttatcaataaattccaagaaatttactatgtcatttt 331  Q
    || ||||| ||||||||||||||||||||||||||||| | ||||||||    
T  665 tcatgttagtttttatcaataaattccaagaaatttaccacgtcatttt 617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1179 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold1179
Description:

Target: scaffold1179; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 1115 - 960
Alignment:
Q  17 acttagagagagaaaggggagtgaaaaatg--aagagaaccggaaccccttcccttatgtagccagtgaaccggaccggtttatttccggtccagtcccc 114  Q
    |||||||||||||||||  |||| ||||||  || | ||||||| | |||||||||||||||||||||||||||||||||  | | |||||||| |||||    
T  1115 acttagagagagaaaggaaagtggaaaatggaaaaaaaaccggagctccttcccttatgtagccagtgaaccggaccggtccaat-ccggtccattcccc 1017  T
Q  115 cttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctc 170  Q
     ||| |||||||||||||||||||||||||||| | ||| |||||||||||||||||    
T  1016 tttgattcctggccgtttgatctagggtttcaggaccctggatcaatcgtgtggctc 960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 28192 - 28093
Alignment:
Q  76 gccagtgaaccggaccggtttatttccggtccagtcccccttg-ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||  |   |||||||| ||||| ||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  28192 gccagtgaaccggaccggtccagaaccggtccattcccctttgattcctggccgtttgatctagggtttcaagatcctggatcaatcgtgtggctcctgt 28093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 113910 - 113812
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| |||||||||||||||||||||||||||||||  | || |||||||| ||||||||||||    
T  113910 agccagtgaaccggaccggtccagt-ccggtccattcccctttgttcctggccgtttgatctagggtttcagggttctggatcaatcatgtggctcctgt 113812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 69 - 277
Target Start/End: Complemental strand, 20920 - 20712
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggc 168  Q
    |||| |||||||||||||||||||||  |   |||||||| || || |  |||||||||||| |||||||||||||  |  ||| ||||||||    | |    
T  20920 ttatatagccagtgaaccggaccggtccaggaccggtccaatctccttcattcctggccgttggatctagggtttcccac-cctggatcaatccaacgtc 20822  T
Q  169 tcctgtacaatctgagtttt-gagtg-tgggctttgggtttgggctttgttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcctgc 266  Q
    |||||| ||||||| ||||| | ||| |||||||||| |||||||||||||||||||||||| |||||||||   ||||| |||||||||||||   |||    
T  20821 tcctgtgcaatctgggttttagtgtgctgggctttgg-tttgggctttgttcttttacgtttttgtttattttcctgctatttgcaccatatttctttgc 20723  T
Q  267 tgtttgcaccc 277  Q
    |||||| ||||    
T  20722 tgtttgaaccc 20712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 12862 - 12807
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  12862 ttcctggccgtttgatctagggtttttgaatcctggatcaatcgtgtggctcctgt 12807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 31164 - 31262
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| |||| ||||||||||||||||||||||| || || |  |||||||| ||||||||||||    
T  31164 agccagtgaaccggaccggtccagt-ccggtccattcccctttgtccctggccgtttgatctagggttttaggattccggatcaatcctgtggctcctgt 31262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 5908 - 5810
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    ||||||||||||||||||||  | | |||||||| ||||| |||| ||||||||||||||||||||||| || || |  |||||||| ||||||||||||    
T  5908 agccagtgaaccggaccggtccagt-ccggtccattcccctttgtccctggccgtttgatctagggttttaggattccggatcaatcctgtggctcctgt 5810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 68 - 277
Target Start/End: Original strand, 3683 - 3893
Alignment:
Q  68 cttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtgg 167  Q
    ||||| |||||||||||||||||||||  |   |||||||| || || |  | |||||||||| |||||||||||||  |  ||| ||||||||    |     
T  3683 cttatatagccagtgaaccggaccggtccaggaccggtccaatctccttcatccctggccgttggatctagggtttcctac-cctggatcaatccaacgt 3781  T
Q  168 ctcctgtacaatctgagttttgagtgt-gggctttgggtttgggctttg--ttcttttacgtttctgtttatttgtttgctacttgcaccatatttgcct 264  Q
    ||||||| |||||||||||||| |||| |||||||||||| |||||| |  ||||||||||||| |||||||||   ||||| |||||||||||||   |    
T  3782 ctcctgtgcaatctgagttttgtgtgttgggctttgggtt-gggcttaggtttcttttacgtttttgtttattttcctgctatttgcaccatatttcttt 3880  T
Q  265 gctgtttgcaccc 277  Q
    |||||||| ||||    
T  3881 gctgtttgaaccc 3893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 16287 - 16232
Alignment:
Q  119 ttcctggccgtttgatctagggtttcagaatcctagatcaatcgtgtggctcctgt 174  Q
    |||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  16287 ttccaggccgtttgatctagggtttcaggatcctggatcaatcctgtggctcctgt 16232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 154997 - 154929
Alignment:
Q  75 agccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggttt 143  Q
    ||||||||||||||||||||  |   ||||||| |||||| | ||||||||||||| ||||||||||||    
T  154997 agccagtgaaccggaccggtccaagaccggtccggtccccttcgttcctggccgttggatctagggttt 154929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 16150 - 16075
Alignment:
Q  69 ttatgtagccagtgaaccggaccggtttatttccggtccagtcccccttgttcctggccgtttgatctagggtttc 144  Q
    |||| |||||||||||||||||||||  ||  |||||||| || || |  |||||||||||| |||||||||||||    
T  16150 ttatatagccagtgaaccggaccggtccatgaccggtccaatctccttcattcctggccgttggatctagggtttc 16075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Original strand, 15755 - 15808
Alignment:
Q  168 ctcctgtacaatctgagttttgagtg-tgggctttgggtttgggctttgttctt 220  Q
    ||||||| |||||||||||||| ||| |||||||| ||||||||||| ||||||    
T  15755 ctcctgtgcaatctgagttttgtgtgttgggctttaggtttgggcttagttctt 15808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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