View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5000_low_10 (Length: 251)
Name: NF5000_low_10
Description: NF5000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5000_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 31746147 - 31746387
Alignment:
| Q |
11 |
gatgaatatataggtatggtcaggggaagtttggaataaaaatttattaaaggtgagacaatagggtggaaacaagtggaaatatgaatgccgttgatct |
110 |
Q |
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| T |
31746147 |
gatgaatatataggtatggtcaggggaagttgggaataaaaatttaataaaggtgagacaatagggtggaaacaagtggaaatatgaatgccgttgatct |
31746246 |
T |
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| Q |
111 |
aactcacttttcaccgtcctcatctttatttctatgctcacacgagttcaaaaggaaccaaagataacatattgtattcttcgatctatgcttctttgca |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
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| T |
31746247 |
gactcacttttcaccgtcctcatctttatttctatgctcacacgagttcaaaaggaaccaaagataacatattgtattctttcatctatgcttcttgcca |
31746346 |
T |
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| Q |
211 |
acttgcaatcatacttcgatctcagtttcacaattttcaca |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
31746347 |
acttgcaatcatacttcgatctcagtttcacaattttcaca |
31746387 |
T |
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