View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5003-Insertion-2 (Length: 294)
Name: NF5003-Insertion-2
Description: NF5003
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5003-Insertion-2 |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 69 - 293
Target Start/End: Original strand, 24185499 - 24185717
Alignment:
| Q |
69 |
aaattataaaggaagattttactatgttttacctaatctttttctaatctccctaatgctatttcgtgcaaatgcatagaaaaatagtattctgatatca |
168 |
Q |
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| T |
24185499 |
aaattataaaggaagaattttctatgttttacataatcattttctaacatcactagtgctatttcgtgcaaatgcatagaaaaatagtattctgatatca |
24185598 |
T |
|
| Q |
169 |
agttcctgttttgacatatagcaggagaagccgcatccgcatccgcatcaaagccaaagctgtcaccaagcaaatccttctcttcctcaaactgttcttc |
268 |
Q |
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|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
24185599 |
agttcctgttttgacatatagcaggagaag------ctgcatccgcatcaaagccaaagctgtcaccaagcaaatcctcctcttcctcaaactgttcttc |
24185692 |
T |
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| Q |
269 |
cccatcctctcctttcatccagagg |
293 |
Q |
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|||||||||||||||| |||||||| |
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| T |
24185693 |
cccatcctctcctttcttccagagg |
24185717 |
T |
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