View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5004-Insertion-1 (Length: 631)

Name: NF5004-Insertion-1
Description: NF5004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5004-Insertion-1
NF5004-Insertion-1
[»] chr3 (40 HSPs)
chr3 (8-565)||(13091116-13091673)
chr3 (8-541)||(13095130-13095664)
chr3 (8-541)||(9363327-9363860)
chr3 (8-561)||(12778872-12779425)
chr3 (8-541)||(20558316-20558837)
chr3 (8-541)||(20152721-20153254)
chr3 (8-541)||(3247644-3248176)
chr3 (8-539)||(6812006-6812525)
chr3 (378-539)||(18980912-18981073)
chr3 (380-538)||(4367758-4367916)
chr3 (367-541)||(10605508-10605683)
chr3 (380-508)||(14974466-14974595)
chr3 (33-169)||(22167724-22167860)
chr3 (362-533)||(22167304-22167474)
chr3 (32-169)||(10605938-10606075)
chr3 (456-539)||(14066699-14066782)
chr3 (380-517)||(15023241-15023376)
chr3 (463-534)||(13198381-13198452)
chr3 (532-565)||(13095673-13095706)
chr3 (532-564)||(20558848-20558880)
chr3 (532-564)||(20561155-20561187)
chr3 (532-564)||(20563463-20563495)
chr3 (463-506)||(12381782-12381825)
chr3 (462-508)||(13063822-13063868)
chr3 (463-541)||(15631933-15632011)
chr3 (462-508)||(37941214-37941260)
chr3 (463-508)||(7597502-7597547)
chr3 (463-504)||(10144189-10144230)
chr3 (463-508)||(10163271-10163316)
chr3 (463-508)||(11877392-11877437)
chr3 (463-508)||(12189871-12189916)
chr3 (463-508)||(12196529-12196574)
chr3 (463-508)||(12677400-12677445)
chr3 (463-508)||(13139220-13139265)
chr3 (463-508)||(13190436-13190481)
chr3 (532-565)||(15023404-15023437)
chr3 (463-508)||(15642196-15642241)
chr3 (463-508)||(16376521-16376566)
chr3 (463-508)||(36531296-36531341)
chr3 (464-508)||(10548246-10548290)
[»] chr8 (33 HSPs)
chr8 (8-541)||(21856165-21856698)
chr8 (8-541)||(20041634-20042167)
chr8 (12-539)||(17617851-17618378)
chr8 (8-541)||(19999425-19999958)
chr8 (60-541)||(45563121-45563602)
chr8 (8-541)||(23215875-23216407)
chr8 (338-541)||(27093445-27093648)
chr8 (362-539)||(19290840-19291017)
chr8 (8-169)||(21234958-21235119)
chr8 (380-539)||(29327167-29327326)
chr8 (380-538)||(21101717-21101875)
chr8 (380-538)||(11349583-11349741)
chr8 (371-561)||(22903069-22903259)
chr8 (380-538)||(21944041-21944199)
chr8 (456-539)||(22288126-22288209)
chr8 (456-539)||(22829016-22829099)
chr8 (32-169)||(19291267-19291404)
chr8 (17-122)||(22287139-22287244)
chr8 (380-539)||(19758780-19758940)
chr8 (464-562)||(18402402-18402501)
chr8 (532-565)||(17618391-17618424)
chr8 (463-534)||(22096360-22096431)
chr8 (462-508)||(23910238-23910284)
chr8 (463-508)||(8311598-8311643)
chr8 (463-508)||(8325892-8325937)
chr8 (464-509)||(19364850-19364895)
chr8 (532-565)||(19999969-20000002)
chr8 (463-508)||(20720879-20720924)
chr8 (463-508)||(21336012-21336057)
chr8 (463-508)||(21953196-21953241)
chr8 (463-508)||(22036560-22036605)
chr8 (463-508)||(22360537-22360582)
chr8 (463-539)||(21824497-21824573)
[»] chr5 (36 HSPs)
chr5 (8-565)||(24937831-24938397)
chr5 (8-565)||(23713051-23713615)
chr5 (8-541)||(23603212-23603745)
chr5 (8-565)||(20447207-20447769)
chr5 (367-541)||(25182614-25182788)
chr5 (362-541)||(21283212-21283391)
chr5 (362-541)||(24217500-24217679)
chr5 (361-541)||(18488551-18488731)
chr5 (367-541)||(20598812-20598987)
chr5 (367-541)||(20605109-20605284)
chr5 (367-541)||(20611428-20611603)
chr5 (367-541)||(20793717-20793892)
chr5 (380-539)||(23522074-23522233)
chr5 (380-534)||(21241945-21242099)
chr5 (380-534)||(23745108-23745262)
chr5 (380-539)||(26844730-26844889)
chr5 (362-533)||(18069953-18070123)
chr5 (33-169)||(18069567-18069703)
chr5 (38-206)||(20794110-20794278)
chr5 (32-206)||(21283604-21283778)
chr5 (33-169)||(20599242-20599378)
chr5 (33-169)||(20605539-20605675)
chr5 (33-169)||(20611858-20611994)
chr5 (32-271)||(24217113-24217352)
chr5 (465-539)||(22945545-22945619)
chr5 (457-534)||(21385399-21385476)
chr5 (463-508)||(24966241-24966286)
chr5 (465-562)||(26780397-26780493)
chr5 (463-534)||(22320477-22320548)
chr5 (532-563)||(24217690-24217721)
chr5 (463-534)||(30766156-30766227)
chr5 (25-63)||(22944496-22944534)
chr5 (463-508)||(25119236-25119281)
chr5 (463-508)||(25178327-25178372)
chr5 (464-508)||(20619292-20619336)
chr5 (464-508)||(22854371-22854415)
[»] chr7 (50 HSPs)
chr7 (8-541)||(10450475-10451008)
chr7 (8-541)||(9580177-9580710)
chr7 (8-541)||(9728045-9728578)
chr7 (8-534)||(16152369-16152895)
chr7 (8-525)||(15288041-15288558)
chr7 (8-508)||(12156-12656)
chr7 (8-541)||(12564135-12564668)
chr7 (8-565)||(4309779-4310346)
chr7 (8-530)||(8784708-8785230)
chr7 (157-542)||(16384217-16384602)
chr7 (361-541)||(13633185-13633365)
chr7 (361-541)||(13739865-13740045)
chr7 (25-315)||(4327586-4327876)
chr7 (362-539)||(542512-542689)
chr7 (362-541)||(14224176-14224356)
chr7 (362-539)||(16328261-16328438)
chr7 (367-534)||(14548147-14548314)
chr7 (380-534)||(8714951-8715105)
chr7 (380-563)||(23512773-23512952)
chr7 (177-315)||(4463254-4463392)
chr7 (8-90)||(10437216-10437298)
chr7 (8-169)||(4463589-4463750)
chr7 (380-538)||(823038-823196)
chr7 (380-538)||(15922608-15922766)
chr7 (429-534)||(4463069-4463174)
chr7 (380-538)||(15063169-15063327)
chr7 (32-169)||(23512368-23512505)
chr7 (33-169)||(14547756-14547892)
chr7 (41-271)||(13632809-13633038)
chr7 (41-271)||(13739489-13739718)
chr7 (32-169)||(542939-543076)
chr7 (380-508)||(15459202-15459331)
chr7 (463-539)||(13670946-13671022)
chr7 (463-539)||(18596341-18596417)
chr7 (463-539)||(18615288-18615364)
chr7 (443-508)||(4327193-4327258)
chr7 (532-565)||(9580719-9580752)
chr7 (532-565)||(9728587-9728620)
chr7 (532-565)||(12564679-12564712)
chr7 (532-565)||(14224132-14224165)
chr7 (26-131)||(16328726-16328831)
chr7 (532-565)||(16384612-16384645)
chr7 (467-539)||(20105387-20105459)
chr7 (462-508)||(11928271-11928317)
chr7 (463-533)||(14147214-14147284)
chr7 (532-565)||(13633376-13633409)
chr7 (463-508)||(13655081-13655126)
chr7 (532-565)||(13740056-13740089)
chr7 (463-508)||(16468643-16468688)
chr7 (463-508)||(16529138-16529183)
[»] chr6 (39 HSPs)
chr6 (8-541)||(17816797-17817330)
chr6 (8-541)||(18189832-18190364)
chr6 (8-533)||(20096238-20096762)
chr6 (8-465)||(22069378-22069838)
chr6 (8-541)||(19589780-19590312)
chr6 (25-538)||(18975411-18975922)
chr6 (12-564)||(24390823-24391385)
chr6 (380-541)||(18847050-18847210)
chr6 (191-541)||(24388774-24389123)
chr6 (380-529)||(25955134-25955284)
chr6 (460-539)||(22064069-22064148)
chr6 (380-538)||(18445674-18445832)
chr6 (32-169)||(23345019-23345156)
chr6 (458-541)||(29683696-29683779)
chr6 (456-541)||(23520821-23520906)
chr6 (32-169)||(18846645-18846782)
chr6 (456-539)||(22596142-22596225)
chr6 (32-271)||(25954729-25954968)
chr6 (8-122)||(23521752-23521866)
chr6 (463-539)||(20019289-20019365)
chr6 (463-539)||(20103924-20104000)
chr6 (464-508)||(27960811-27960855)
chr6 (463-508)||(2654011-2654056)
chr6 (532-565)||(17817342-17817375)
chr6 (532-565)||(25955302-25955335)
chr6 (463-562)||(16152769-16152873)
chr6 (463-534)||(8727038-8727109)
chr6 (462-508)||(15698348-15698394)
chr6 (462-508)||(15851351-15851397)
chr6 (462-508)||(22242613-22242659)
chr6 (463-508)||(10716592-10716637)
chr6 (463-508)||(11216976-11217021)
chr6 (463-508)||(18008971-18009016)
chr6 (25-122)||(20166339-20166436)
chr6 (463-508)||(20167320-20167365)
chr6 (463-508)||(22168658-22168703)
chr6 (463-508)||(24858286-24858331)
chr6 (536-564)||(18847225-18847253)
chr6 (332-368)||(29683203-29683239)
[»] chr4 (23 HSPs)
chr4 (8-539)||(15350401-15350935)
chr4 (12-541)||(15448795-15449323)
chr4 (8-541)||(11499146-11499679)
chr4 (8-541)||(18289218-18289751)
chr4 (8-541)||(45241441-45241974)
chr4 (8-541)||(14688339-14688872)
chr4 (362-530)||(10619685-10619853)
chr4 (362-530)||(10824706-10824874)
chr4 (380-508)||(3373686-3373814)
chr4 (380-508)||(3351733-3351862)
chr4 (380-508)||(21100387-21100516)
chr4 (32-271)||(10824319-10824558)
chr4 (8-48)||(16640663-16640703)
chr4 (464-539)||(4546-4621)
chr4 (463-534)||(15263115-15263186)
chr4 (463-534)||(15960923-15960994)
chr4 (456-508)||(11919353-11919405)
chr4 (532-565)||(10619872-10619905)
chr4 (532-565)||(10824893-10824926)
chr4 (8-121)||(11920292-11920405)
chr4 (463-508)||(16679504-16679549)
chr4 (463-508)||(22108091-22108136)
chr4 (464-508)||(10649212-10649256)
[»] scaffold0026 (3 HSPs)
scaffold0026 (8-536)||(15698-16226)
scaffold0026 (380-508)||(131062-131191)
scaffold0026 (532-565)||(16242-16275)
[»] chr1 (18 HSPs)
chr1 (12-541)||(21789168-21789695)
chr1 (8-530)||(27044006-27044531)
chr1 (380-539)||(22627637-22627797)
chr1 (380-538)||(3987063-3987220)
chr1 (456-539)||(8650126-8650209)
chr1 (465-539)||(8950484-8950558)
chr1 (463-539)||(22466026-22466102)
chr1 (456-539)||(19772835-19772918)
chr1 (456-539)||(19773680-19773763)
chr1 (456-539)||(19774525-19774608)
chr1 (456-539)||(19775370-19775453)
chr1 (456-539)||(19776215-19776298)
chr1 (456-539)||(19777060-19777143)
chr1 (462-508)||(17095971-17096017)
chr1 (10-63)||(16398943-16398996)
chr1 (463-508)||(19782123-19782168)
chr1 (463-508)||(21801752-21801797)
chr1 (463-508)||(22844844-22844889)
[»] scaffold0035 (4 HSPs)
scaffold0035 (8-525)||(104552-105070)
scaffold0035 (362-539)||(53080-53257)
scaffold0035 (25-218)||(32915-33108)
scaffold0035 (32-206)||(53470-53644)
[»] scaffold0413 (1 HSPs)
scaffold0413 (160-541)||(14082-14463)
[»] scaffold0222 (2 HSPs)
scaffold0222 (262-541)||(17232-17511)
scaffold0222 (532-565)||(17522-17555)
[»] scaffold0012 (4 HSPs)
scaffold0012 (209-542)||(9890-10223)
scaffold0012 (209-542)||(13993-14326)
scaffold0012 (13-254)||(10214-10455)
scaffold0012 (8-254)||(14317-14563)
[»] scaffold1184 (1 HSPs)
scaffold1184 (8-541)||(1181-1714)
[»] scaffold0566 (2 HSPs)
scaffold0566 (340-541)||(92-293)
scaffold0566 (535-565)||(307-337)
[»] scaffold0074 (1 HSPs)
scaffold0074 (35-541)||(9554-10057)
[»] scaffold0860 (1 HSPs)
scaffold0860 (13-258)||(4603-4848)
[»] chr2 (31 HSPs)
chr2 (362-539)||(26921517-26921694)
chr2 (367-534)||(25354539-25354706)
chr2 (362-508)||(14619-14765)
chr2 (380-508)||(24823101-24823230)
chr2 (380-538)||(25360831-25360988)
chr2 (35-213)||(24366484-24366662)
chr2 (457-541)||(23244380-23244464)
chr2 (35-213)||(24369207-24369385)
chr2 (33-206)||(25354148-25354321)
chr2 (463-539)||(25373971-25374047)
chr2 (32-139)||(15045-15152)
chr2 (463-539)||(16772770-16772846)
chr2 (363-530)||(24021175-24021343)
chr2 (39-169)||(25360433-25360563)
chr2 (532-565)||(25361001-25361034)
chr2 (532-565)||(26921707-26921740)
chr2 (463-539)||(22291314-22291390)
chr2 (463-534)||(22047685-22047756)
chr2 (8-63)||(24021748-24021803)
chr2 (465-508)||(25146956-25146999)
chr2 (90-169)||(26921188-26921267)
chr2 (463-534)||(27620691-27620762)
chr2 (25-123)||(21514550-21514648)
chr2 (463-508)||(114632-114677)
chr2 (461-506)||(15531711-15531756)
chr2 (463-508)||(22868838-22868883)
chr2 (463-508)||(24798388-24798433)
chr2 (25-102)||(25591176-25591253)
chr2 (463-508)||(27624721-27624766)
chr2 (10-122)||(24173451-24173563)
chr2 (332-388)||(29954218-29954274)
[»] scaffold0357 (2 HSPs)
scaffold0357 (380-541)||(711-875)
scaffold0357 (142-223)||(1085-1166)
[»] scaffold0175 (1 HSPs)
scaffold0175 (380-541)||(9968-10132)
[»] scaffold0848 (1 HSPs)
scaffold0848 (12-216)||(278-482)
[»] scaffold0560 (1 HSPs)
scaffold0560 (380-539)||(3868-4028)
[»] scaffold0168 (1 HSPs)
scaffold0168 (110-198)||(389-477)
[»] scaffold0741 (1 HSPs)
scaffold0741 (380-538)||(1053-1211)
[»] scaffold0485 (2 HSPs)
scaffold0485 (380-541)||(12077-12241)
scaffold0485 (27-125)||(12553-12651)
[»] scaffold0093 (2 HSPs)
scaffold0093 (367-541)||(35109-35284)
scaffold0093 (463-534)||(4470-4541)
[»] scaffold0230 (1 HSPs)
scaffold0230 (380-538)||(10473-10631)
[»] scaffold0018 (1 HSPs)
scaffold0018 (380-508)||(15457-15586)
[»] scaffold0146 (3 HSPs)
scaffold0146 (362-508)||(39403-39549)
scaffold0146 (429-538)||(20085-20194)
scaffold0146 (32-156)||(39016-39140)
[»] scaffold0037 (1 HSPs)
scaffold0037 (380-538)||(50229-50387)
[»] scaffold0123 (2 HSPs)
scaffold0123 (463-541)||(12857-12935)
scaffold0123 (12-121)||(11843-11952)
[»] scaffold0414 (2 HSPs)
scaffold0414 (33-206)||(15003-15176)
scaffold0414 (362-533)||(15389-15559)
[»] scaffold0075 (2 HSPs)
scaffold0075 (380-539)||(27715-27874)
scaffold0075 (464-539)||(37397-37472)
[»] scaffold0220 (1 HSPs)
scaffold0220 (464-541)||(12653-12730)
[»] scaffold0142 (1 HSPs)
scaffold0142 (380-508)||(24021-24150)
[»] scaffold0029 (2 HSPs)
scaffold0029 (361-533)||(120433-120604)
scaffold0029 (32-169)||(120047-120184)
[»] scaffold0233 (1 HSPs)
scaffold0233 (380-508)||(3373-3502)
[»] scaffold1623 (1 HSPs)
scaffold1623 (33-156)||(36-159)
[»] scaffold1474 (1 HSPs)
scaffold1474 (380-508)||(761-890)
[»] scaffold0001 (1 HSPs)
scaffold0001 (463-539)||(50907-50983)
[»] scaffold0165 (1 HSPs)
scaffold0165 (463-538)||(35726-35801)
[»] scaffold1620 (1 HSPs)
scaffold1620 (464-508)||(1316-1360)
[»] scaffold0290 (1 HSPs)
scaffold0290 (463-539)||(21674-21750)
[»] scaffold0213 (1 HSPs)
scaffold0213 (25-121)||(23727-23823)
[»] scaffold0016 (1 HSPs)
scaffold0016 (463-534)||(196990-197061)
[»] scaffold0375 (1 HSPs)
scaffold0375 (464-510)||(1209-1255)
[»] scaffold0011 (1 HSPs)
scaffold0011 (480-541)||(171185-171247)
[»] scaffold0374 (1 HSPs)
scaffold0374 (464-524)||(8971-9031)
[»] scaffold0156 (1 HSPs)
scaffold0156 (464-508)||(9537-9581)
[»] scaffold0117 (1 HSPs)
scaffold0117 (456-508)||(35884-35936)
[»] scaffold0613 (1 HSPs)
scaffold0613 (463-534)||(9114-9185)
[»] scaffold0473 (1 HSPs)
scaffold0473 (463-534)||(6446-6517)
[»] scaffold0367 (1 HSPs)
scaffold0367 (463-533)||(1760-1830)
[»] scaffold0127 (1 HSPs)
scaffold0127 (462-508)||(551-597)
[»] scaffold0020 (2 HSPs)
scaffold0020 (465-539)||(113774-113848)
scaffold0020 (465-539)||(118078-118152)
[»] scaffold1589 (1 HSPs)
scaffold1589 (463-508)||(17-62)
[»] scaffold1400 (1 HSPs)
scaffold1400 (463-508)||(1528-1573)
[»] scaffold0718 (1 HSPs)
scaffold0718 (463-508)||(771-816)
[»] scaffold0637 (1 HSPs)
scaffold0637 (463-508)||(2774-2819)
[»] scaffold0506 (1 HSPs)
scaffold0506 (463-508)||(5120-5165)
[»] scaffold0164 (1 HSPs)
scaffold0164 (463-508)||(36309-36354)
[»] scaffold0072 (1 HSPs)
scaffold0072 (463-508)||(59503-59548)
[»] scaffold0049 (1 HSPs)
scaffold0049 (463-508)||(40979-41024)
[»] scaffold0032 (1 HSPs)
scaffold0032 (463-508)||(89271-89316)
[»] scaffold0015 (1 HSPs)
scaffold0015 (463-508)||(211846-211891)
[»] scaffold0014 (1 HSPs)
scaffold0014 (343-388)||(190410-190455)
[»] scaffold2037 (1 HSPs)
scaffold2037 (464-508)||(380-424)
[»] scaffold0932 (1 HSPs)
scaffold0932 (464-508)||(60-104)
[»] scaffold0873 (1 HSPs)
scaffold0873 (464-508)||(2825-2869)
[»] scaffold0802 (1 HSPs)
scaffold0802 (463-539)||(431-507)
[»] scaffold0443 (1 HSPs)
scaffold0443 (101-133)||(10525-10557)
[»] scaffold0326 (2 HSPs)
scaffold0326 (464-504)||(6592-6632)
scaffold0326 (464-504)||(14494-14534)
[»] scaffold0258 (1 HSPs)
scaffold0258 (464-508)||(23518-23562)
[»] scaffold0162 (1 HSPs)
scaffold0162 (464-508)||(36415-36459)
[»] scaffold0150 (1 HSPs)
scaffold0150 (463-539)||(22570-22646)
[»] scaffold0042 (1 HSPs)
scaffold0042 (464-508)||(25148-25192)


Alignment Details
Target: chr3 (Bit Score: 482; Significance: 0; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Complemental strand, 13091673 - 13091116
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  13091673 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaggtcaaactg 13091574  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||    
T  13091573 aagccaatcccaaagaccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgtgataga 13091474  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||| |    
T  13091473 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaacccaaaatccatgtcccacaaaggcttgtt 13091374  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13091373 aagcctaacttcatagtgattgagagtttttccaccccttttgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 13091274  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13091273 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 13091174  T
Q  508 atgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13091173 atgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatgatgcg 13091116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 13095130 - 13095664
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13095130 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 13095229  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13095230 aagccaatcccaaaggtcttgtaaatgctattcaacttagggacggtaagcagttagaggacaccattatgaaaactaagacaattgagggtgagataga 13095329  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13095330 gagtgaaaagcaacaagctgagaaagtcataggagagagtgataagccaatagtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 13095429  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13095430 aagcctaaattcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaaaatatgtgtgatttgggagagaatctcaggt 13095529  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcg-tgggatgcaacc 506  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||    
T  13095530 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgaaggaaggcaacc 13095629  T
Q  507 catgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||||||||||||||||||||||||||    
T  13095630 catgagttttattgcttttattttgtttgttttgt 13095664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 470; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 9363860 - 9363327
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9363860 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 9363761  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9363760 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggacaccattatgaaaactaagacaattgagggtgagataga 9363661  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  9363660 gagtgaaaaacaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 9363561  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  9363560 aagcctaacttcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggagagaatctcaagt 9363461  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9363460 tgatgccattatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 9363361  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    || |||||||||||||||||||||||||||||||    
T  9363360 ataagttttattgcttttattttgtttgttttgt 9363327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 8 - 561
Target Start/End: Complemental strand, 12779425 - 12778872
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||    
T  12779425 attgctactcacactagaatgctagaaactcaaatctctcatgtagcccaataagtagctacttcctctcaaacccccgaagtctttccaggtcaaattg 12779326  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||| ||||| |||||||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||     
T  12779325 aagccaaccacaaagaccttataaatgctattcaacttagggacggttagcagttagaggaccccattatgaaaactaagacaatttagggtgagatagt 12779226  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||| || |||| |||||  ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  12779225 gagtgaaaagcaacaaggtgagaaagtcataggagagtgttataatccaatcttttcaccaccttataaactcaaaattcatgtcccacaaaggcttgct 12779126  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  12779125 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggatagaatctcaggt 12779026  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  12779025 tgatgtcactatccctttgggaaagattgggtattgggtagagaaatcttctaatcgttaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 12778926  T
Q  508 atgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatga 561  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12778925 acgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatga 12778872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 20558316 - 20558837
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||| ||||||| ||||||| |||||||||||    
T  20558316 attgctactcacactagaatgctagaaactcaaatctctcaagt------------agctacttcctctcaaacccccgatgtctttcaaagtcaaactg 20558403  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||     
T  20558404 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaatcagttagaggaccccattatgaaaactaagacaattgagggtgagatagc 20558503  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  20558504 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 20558603  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||| ||||||||||||    
T  20558604 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattaagaaagctatgtgtgatttgggaaagaatctcaggt 20558703  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20558704 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 20558803  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | ||||||||||||||||||||||||||||||||    
T  20558804 acgagttttattgcttttattttgtttgttttgt 20558837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 20152721 - 20153254
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||| ||||||||||||    
T  20152721 attgctactcacactagaatgctagaaactcaaatctctcacgtagctcaacaagtagctacttcctctcaaacccctgaagtcttttcaagtcaaactg 20152820  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  20152821 aagccaaccctaaaggccttataaatgctattcaacttagggacggtaagcagttaaaggaccccattatgaaaactaagacaattgagggtgagataga 20152920  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20152921 gagtgaaaagcaacaaggtgagaaagttataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgttccacaaaggcttgct 20153020  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||  | |||||||||||||| |||   ||||||||||||||||||||  | || |    
T  20153021 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgataaaaagtgaaaccattgacaaagtcatgtgtgatttgggagagaacgttagtt 20153120  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20153121 tgatgacattatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 20153220  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  20153221 acgagtttaattgcttttattttgtttgttttgt 20153254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 3248176 - 3247644
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  3248176 attgctactcacattagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgatatctttccaagccaaactg 3248077  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||||||||||||||||||||||||    
T  3248076 aagcaaaccc-aaaggccttataaattctattcaacttagggacggtaagcaattagaggaccccattatgaaagctaagacaattgagggtgagataga 3247978  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||| | |||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||||    
T  3247977 gagtgaaaagcaacaaggtgagtaagtcatatgagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatttcccacaaaggcttgct 3247878  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  | ||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||   |||||||||||||| |||||| ||||||    
T  3247877 aagcctaacctgatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattaagaaagtcatgtgtgatttgggggagaatgtcaggt 3247778  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||| || ||||||||||| ||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  3247777 tgatgtcattatccctttgggaaagattgggtatagggtagagaaacctcttaaccgtcaagctaatgactctaaacgagcgcttcgtgggaggcaaccc 3247678  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||| ||| |||||||||||||||||||||    
T  3247677 atgagtttaatttcttttattttgtttgttttgt 3247644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 539
Target Start/End: Original strand, 6812006 - 6812525
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||  ||||||||||    
T  6812006 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccctgatgtctttcacagtcaaactg 6812105  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||| | |||||||||||||||||||||||| ||||||||||    
T  6812106 aagccaaccccaaaggccttataaatgctattcaaattagggacggtaatcagttaaaggaccccattatgaaaactaagacaattgagagtgagataga 6812205  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||               ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  |    
T  6812206 gagtgaaaagcaacaaggtgaga---------------gtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttatt 6812290  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattg---agagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctca 404  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||   |||||||||||||||||||| |||||||| |||||||||||||||| |    
T  6812291 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgttgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctta 6812390  T
Q  405 ggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6812391 ggttgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaa 6812490  T
Q  505 cccatgagttttattgcttttattttgtttgtttt 539  Q
    |||| | |||| |||||||||||||||||| ||||    
T  6812491 cccacgggtttaattgcttttattttgtttttttt 6812525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 378 - 539
Target Start/End: Complemental strand, 18981073 - 18980912
Alignment:
Q  378 ctatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgac 477  Q
    |||||||||||||||| |||||| |||| ||||||||||| ||||||||  ||||||||||||| || |||||||||| | | |||||||||||||||||    
T  18981073 ctatgtgtgatttgggggagaatgtcagtttgatgccactgtccctttgtgaaagattgggtataggatagagaaaccctttgatcgtcaagctaatgac 18980974  T
Q  478 tctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| ||||||||    
T  18980973 tttaaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgtttt 18980912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 4367758 - 4367916
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  ||||||||||||| || |||||||||| | ||| ||||||||||||||||     
T  4367758 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgtgaaagattgggtataggatagagaaaccctttaaccgtcaagctaatgactt 4367857  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  4367858 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 4367916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 10605683 - 10605508
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||| || ||||||||||||||  | | ||||    
T  10605683 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccactatccctttgggaaagattgggcatagggtagagaaacctcttgaacgtc 10605584  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  10605583 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 10605508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 14974595 - 14974466
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  |||||||||||||  | ||| |||||| |||| | ||||||||||||||||    
T  14974595 atgtgtgatttgggggagaatgtcagtttgatgccattttccctttgtgaaagattgggtataagatagggaaacctttcttaccgtcaagctaatgact 14974496  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| |||||||| |||||| ||||||||    
T  14974495 ataaaggagcgctttgtgggaggcaaccca 14974466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 22167860 - 22167724
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  22167860 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 22167761  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  22167760 ttctattattcttagggatggtaaccaattagaggac 22167724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 533
Target Start/End: Complemental strand, 22167474 - 22167304
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | || ||||||||||||||||||  |||||||| |||  ||||||||||| ||||||| ||||| ||||||| || |||  | |    
T  22167474 gaaagcattgagaaagccatatgtgatttgggagagaatgccaggttgacgccgttatccctttgggaaagattaggtatagggtagaaaagcctcttga 22167375  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    |||||||||||| |||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||    
T  22167374 tcgtcaagctaa-gactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtt 22167304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 10606075 - 10605938
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||  |||||    
T  10606075 gaaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggctatataa 10605976  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   |||||||| ||||| || |||||||||    
T  10605975 gttctatttttcttagggatggtaaccaattagaggac 10605938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 14066782 - 14066699
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  14066782 ttctaaccgtcaagctaatgactctaaaggagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtttgtttt 14066699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 380 - 517
Target Start/End: Original strand, 15023241 - 15023376
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| | || |||||  ||||||||||||  || ||||||||||||  |||  ||||||||||||||     
T  15023241 atgtgtgatttgggggagaatgtcagtttgatgccattgtctctttgtgaaagattgggta--ggatagagaaacctttgaattatcaagctaatgactt 15023338  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagtttta 517  Q
    ||||  ||||||||| |||| |||| ||| ||||||||    
T  15023339 taaacaagcgcttcgcgggaggcaatccacgagtttta 15023376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 13198452 - 13198381
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| || ||| | ||||||| ||||||||    
T  13198452 cgtcaagctaatgactataaaaaagcgcttcgtgggaggcaacccacgaatttaactgcttttgttttgttt 13198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 13095673 - 13095706
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  13095673 tttgttttgtaggtatttgtccaaatatgatgcg 13095706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 564
Target Start/End: Original strand, 20558848 - 20558880
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgc 564  Q
    |||||||||||||||||||||||||||||||||    
T  20558848 tttgttttgtaggtatttgtccaaatatgatgc 20558880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 564
Target Start/End: Original strand, 20561155 - 20561187
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgc 564  Q
    |||||||||||||||||||||||||||||||||    
T  20561155 tttgttttgtaggtatttgtccaaatatgatgc 20561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 564
Target Start/End: Original strand, 20563463 - 20563495
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgc 564  Q
    |||||||||||||||||||||||||||||||||    
T  20563463 tttgttttgtaggtatttgtccaaatatgatgc 20563495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 506
Target Start/End: Original strand, 12381782 - 12381825
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacc 506  Q
    |||||||||||||||| ||||| |||||||||||||| ||||||    
T  12381782 cgtcaagctaatgactataaaaaagcgcttcgtgggaggcaacc 12381825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 13063822 - 13063868
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  13063822 tcgtcaagctattgacaataaaagagcgcttcgtgggaggcaaccca 13063868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 541
Target Start/End: Complemental strand, 15632011 - 15631933
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| |||  |||| |||||||| ||||||    
T  15632011 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaattatttttgttttgttttttttgt 15631933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 37941214 - 37941260
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  37941214 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 37941260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 7597502 - 7597547
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  7597502 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 7597547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 504
Target Start/End: Original strand, 10144189 - 10144230
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    |||||||||||||||| |||| ||||||||||||||| ||||    
T  10144189 cgtcaagctaatgactataaacgagcgcttcgtgggaggcaa 10144230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 10163316 - 10163271
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  10163316 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 10163271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 11877437 - 11877392
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  11877437 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 11877392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 12189916 - 12189871
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  12189916 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 12189871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 12196574 - 12196529
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  12196574 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 12196529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 12677445 - 12677400
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||    
T  12677445 cgtcaagctaatgacattaaaaaagcgcttcgtgggaggcaaccca 12677400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 13139265 - 13139220
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  13139265 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 13139220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 13190481 - 13190436
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  13190481 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 13190436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 15023404 - 15023437
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    |||||||||||||| |||||||||||||||||||    
T  15023404 tttgttttgtaggtttttgtccaaatatgatgcg 15023437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 15642196 - 15642241
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  15642196 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 15642241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 16376566 - 16376521
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16376566 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 16376521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 36531296 - 36531341
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||    
T  36531296 cgtcaagctaatgacattaaaaaagcgcttcgtgggaggcaaccca 36531341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 10548290 - 10548246
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  10548290 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaaccca 10548246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 474; Significance: 0; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 474; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 21856698 - 21856165
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21856698 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 21856599  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  21856598 aagccaaccccagaggccttataaatgccattcaacttagggacggtaagcagttagaggacaccattatgaaaactaagacaattgagggtgagataga 21856499  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  21856498 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 21856399  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21856398 aagcctaacttcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggagagaatctcaggt 21856299  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  21856298 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggagtcaaccc 21856199  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||||||||||||||||||||||||||||||    
T  21856198 atgagttttattgcttttattttgtttgttttgt 21856165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 20042167 - 20041634
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  20042167 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaggtcaaactg 20042068  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  20042067 aagccaaccccaaagaccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 20041968  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  20041967 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 20041868  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  20041867 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctcaggt 20041768  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20041767 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 20041668  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  20041667 acgagtttaattgcttttattttgtttgttttgt 20041634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 12 - 539
Target Start/End: Original strand, 17617851 - 17618378
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17617851 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactgaagc 17617950  T
Q  112 caaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagt 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17617951 caaccccaaaggccttataaatgctattcaacttagggacggtaagcatttagaggacaccattatgaaaactaagacaattgagggtgagatagagagt 17618050  T
Q  212 gaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagc 311  Q
    |||||||| |||| |||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17618051 gaaaagcagcaaggtgagaaagtcataggaaagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgctaagc 17618150  T
Q  312 ctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgat 411  Q
    ||||  ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17618151 ctaacctcatagtgattgagagtttttccaccacttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgat 17618250  T
Q  412 gccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatga 511  Q
    | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||    
T  17618251 gtcactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcatgggaggcaacccacga 17618350  T
Q  512 gttttattgcttttattttgtttgtttt 539  Q
    |||| ||| |||||||||||||||||||    
T  17618351 gtttaattacttttattttgtttgtttt 17618378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 19999425 - 19999958
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||||||||    
T  19999425 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccaatgtctttcaaagtcaaactg 19999524  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  19999525 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 19999624  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||||    
T  19999625 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttagaaactccaaatccatgtcccacaaaggcttgct 19999724  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||  |    
T  19999725 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgagaaagctatgtgtgaattgggagagaatctcaaat 19999824  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||  | || ||||||||||||||| |||| ||||||||||||||| |||||||    
T  19999825 tgatgccactatccctttgggaaagattgggtatagggtagagaaacctcttgattgtcaagctaatgactttaaacgagcgcttcgtgggaggcaaccc 19999924  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | | |||| |||||||||||||||||||||||||    
T  19999925 acgggtttaattgcttttattttgtttgttttgt 19999958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 60 - 541
Target Start/End: Complemental strand, 45563602 - 45563121
Alignment:
Q  60 aagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaattctattcaacttagggacggtaagca 159  Q
    ||||||||||||||||| || ||| || ||||||||| ||||||||||||  |||||||||||| | ||||||| |||||  ||||||||| |||||| |    
T  45563602 aagtagctacttcctctaaaaccctcggagtctttccgagtcaaactgaaatcaaccccaaaggtcgtataaatgctattacacttagggatggtaagaa 45563503  T
Q  160 gttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaata 259  Q
     ||||||||| |  || ||||| | |||| |||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||     
T  45563502 attagaggaccccgttgtgaaatccaagataattgagggtgagatagagattgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatt 45563403  T
Q  260 gtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgaga 359  Q
    |||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||    
T  45563402 gtttcaccaccttataaactcaaaattcatttcccacaaaggcttgctaagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgaga 45563303  T
Q  360 gtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttct 459  Q
    ||||||||||| | |||   ||||||||| | || || | | | || ||||| ||| | ||||||||| |||||||   |||||||||||||||||||||    
T  45563302 gtgaaaccattaagaaagacatgtgtgatctaggggatagtgttagtttgataccattttccctttgggaaagattacttattgggtagagaaaccttct 45563203  T
Q  460 aatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  45563202 aatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 45563121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 23216407 - 23215875
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||     
T  23216407 attgctaatcacactagaatgttagaaactcaaatctctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccgagccaaacta 23216308  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| ||||||| || ||||| |||||||| ||||||||||||||||| || | ||||||||||| |||||||||||| ||||||||||    
T  23216307 aagccaaccccaaagaccttatatatgctattaaacttaggcacggtaagcagttagagaacccgattatgaaaaccaagacaattgagtgtgagataga 23216208  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
     |||||||| |  |||  |||||| | ||||||||| |||||||||||||| |||||||||||  ||| ||||||||| ||| |||||||||||||||||    
T  23216207 aagtgaaaaaccgcaaagtgagaaagccataggagaaagtgataagccaattgtttcaccaccccataaactcaaaattcatttcccacaaaggcttgct 23216108  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  | | | ||||||||||||| |||||| ||| |||||||| ||||||||||||| | ||| | ||||||||| | || || | | | | ||    
T  23216107 aagcctaaccttagaatgattgagagtttttccaccacttatgtgattgggagtgaaaccattaagaaagccatgtgtgatctaggggatagtgtta-gt 23216009  T
Q  408 tgatgccactatc-cctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacc 506  Q
    | |||||| || | ||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||| || |||||| ||||||    
T  23216008 ttatgcca-tagctcctttgtgaaaggttgggtatagggtagagaaaccttctaatcgtcaagctaatgactttaaacgagcgtttggtgggaggcaacc 23215910  T
Q  507 catgagttttattgcttttattttgtttgttttgt 541  Q
    ||  |||||||||||||||||||||||||||||||    
T  23215909 cacaagttttattgcttttattttgtttgttttgt 23215875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 338 - 541
Target Start/End: Original strand, 27093445 - 27093648
Alignment:
Q  338 tccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgg 437  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  27093445 tccaccccttgtgtgattgagagtgaaaccattgagaaagctatgtgttatttgggagagaatctcaggttgatgccactatccctttgggaaagattgg 27093544  T
Q  438 gtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtt 537  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||||||    
T  27093545 gtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaagcaacccacgagtttaattgcttttattctgtttgtt 27093644  T
Q  538 ttgt 541  Q
    ||||    
T  27093645 ttgt 27093648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 362 - 539
Target Start/End: Complemental strand, 19291017 - 19290840
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | ||||||||||||||||||||| ||||||||| |||  ||||||||||| ||||||||||||| |||||||||||||   | |    
T  19291017 gaaagcattgagaaagccatgtgtgatttgggagagaatgtcaggttgacgccgttatccctttgggaaagattgggtatagggtagagaaaccccttga 19290918  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | |||||| |||||||| |||| ||||||||||||||| | |||||| | |||| |||||||||||||||||||||||    
T  19290917 ttgtcaagttaatgactttaaacgagcgcttcgtgggaggaaacccacgggtttaattgcttttattttgtttgtttt 19290840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 21234958 - 21235119
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||| ||||||||| ||||||||||    
T  21234958 attgatactcacactaaaatgctagaaactcaaatctcttaagtagcccaacaagtagctatttcctctcaaacccccggagtctttccgagtcaaactg 21235057  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggac 169  Q
    || ||||||||||||||| ||||| | |||||   |||||||| ||||| || ||| |||||    
T  21235058 aaaccaaccccaaaggccatataagtgctattactcttagggatggtaaacatttaaaggac 21235119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 380 - 539
Target Start/End: Original strand, 29327167 - 29327326
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||||||| | || |||||||||| | | ||||||||||||||||||     
T  29327167 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagattgggtgtaggatagagaaaccctttgatcgtcaagctaatgactt 29327266  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||||||| ||||||||||  ||| ||||||||| |||| ||||||||    
T  29327267 taaaagagcgcttcgtgggaggcaacccatgcatttaattgcttttgttttatttgtttt 29327326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 380 - 538
Target Start/End: Complemental strand, 21101875 - 21101717
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  21101875 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgtgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 21101776  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  21101775 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 21101717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 538
Target Start/End: Complemental strand, 11349741 - 11349583
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| || ||| |||| ||||||||| | ||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  11349741 atgtgtgatttgggggataatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 11349642  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    ||||  |||||||||||||| ||||||||||  ||| ||||||||| |||| |||||||    
T  11349641 taaacaagcgcttcgtgggaggcaacccatgcatttaattgcttttgttttatttgttt 11349583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 371 - 561
Target Start/End: Original strand, 22903069 - 22903259
Alignment:
Q  371 gaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagc 470  Q
    |||||| | |||||||| |||||||| | | |||| |||||| || | ||||||||  |||| |||||||| ||||||||||| ||   |||||||||||    
T  22903069 gaaaaagccatgtgtgacttgggagaaagtgtcagtttgatgtcattgtccctttgtgaaaggttgggtatagggtagagaaatctctcaatcgtcaagc 22903168  T
Q  471 taatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatga 561  Q
    |||||||  |||| ||| | |||||| || |||||||| |||||| ||| |||||||||||||||||||||||||  ||||||||| ||||    
T  22903169 taatgacattaaatgagtgtttcgtgagaggcaacccacgagtttaattccttttattttgtttgttttgtaggtgattgtccaaaaatga 22903259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 538
Target Start/End: Complemental strand, 21944199 - 21944041
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| || ||| |||  ||||||||| ||||||||||  ||||||||||||| || |||||||||| | | | | ||||||||||||||     
T  21944199 atgtgtgatttgggggaaaatgtcaatttgatgccattatccctttgtgaaagattgggtataggatagagaaaccctttgaccatcaagctaatgactt 21944100  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| | |||||| |  ||| ||||||||| |||| |||||||    
T  21944099 taaacgagcgcttcgtgggaggaaacccacgcatttaattgcttttgttttatttgttt 21944041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 456 - 539
Target Start/End: Original strand, 22288126 - 22288209
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||| |  ||| ||||||||| |||||||||||||    
T  22288126 ttctaaccgtcaagctaatgactctaaaagagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttgtttgtttt 22288209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 456 - 539
Target Start/End: Original strand, 22829016 - 22829099
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  22829016 ttctaaccgtcaagctaatgactctaaaggagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtttgtttt 22829099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 19291404 - 19291267
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| || |||   |||| ||| ||||||||||| ||||||||||||||| |||||    
T  19291404 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccaccgggatcttcccaggtcaaactgaaaccaaccccaaaggccatataa 19291305  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   |||||||| ||||| || ||| |||||    
T  19291304 gttctattactcttagggatggtaaccaattaaaggac 19291267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 22287139 - 22287244
Alignment:
Q  17 cacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaacc 116  Q
    ||||||| |||||| || ||||||||||| ||||| |||||| |||| || || || |||||| | || | |||||||||  ||||||||||||||||||    
T  22287139 cacactaaaatgcttgagactcaaatctcccaagtggcccaacaagtggccacctcttctcaaacaccgggagtctttcctggtcaaactgaagccaacc 22287238  T
Q  117 ccaaag 122  Q
    ||||||    
T  22287239 ccaaag 22287244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 380 - 539
Target Start/End: Original strand, 19758780 - 19758940
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||| ||||| |||||| | |  |||||| || | |||||| |  |||||||||||||  | ||| || ||||| ||||  |||||||||||||||    
T  19758780 atgtgtgacttgggggagaatgttaatttgatgtcattgtcccttcgtgaaagattgggtataagatagggagacctttctaaatgtcaagctaatgact 19758879  T
Q  479 ctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
     |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| ||||||||    
T  19758880 ttaaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgtttt 19758940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 562
Target Start/End: Original strand, 18402402 - 18402501
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatttt-gtttgttttgtaggtatttgtccaaatatgat 562  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||  ||| | || |||| ||||   |||||||||||||| |||||| | ||||||    
T  18402402 gtcaagctaatgactataaaggagcgcttcgtgggaggcaacccatgcatttaactgttttttttttaagttgttttgtaggtaattgtccgagtatgat 18402501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 17618391 - 17618424
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  17618391 tttgttttgtaggtatttgtccaaatatgatgcg 17618424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 22096360 - 22096431
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  22096360 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 22096431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 23910238 - 23910284
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  23910238 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 23910284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 8311598 - 8311643
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  8311598 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 8311643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 8325937 - 8325892
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  8325937 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 8325892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 509
Target Start/End: Original strand, 19364850 - 19364895
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccat 509  Q
    ||||||||| |||| ||||||||||| ||||||||| |||||||||    
T  19364850 gtcaagctagtgacactaaaagagcgtttcgtgggaggcaacccat 19364895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 19999969 - 20000002
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    |||||||||||||||||| |||||||||||||||    
T  19999969 tttgttttgtaggtatttttccaaatatgatgcg 20000002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 20720879 - 20720924
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  20720879 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 20720924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 21336012 - 21336057
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  21336012 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 21336057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 21953196 - 21953241
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  21953196 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 21953241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 22036605 - 22036560
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  22036605 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 22036560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 22360537 - 22360582
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||| ||||||||| |||| ||||||||||||||| ||||||||    
T  22360537 cgtcaaactaatgactataaaggagcgcttcgtgggaggcaaccca 22360582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 21824497 - 21824573
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||| ||||  |||||||||||| | |||||||| |  ||| | ||||||| |||||||| ||||    
T  21824497 cgtcaagctaatgactataaagaagcgcttcgtggaaggcaacccacgcatttaactgcttttgttttgtttttttt 21824573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 455; Significance: 0; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 455; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Original strand, 24937831 - 24938397
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| |||||||||||    
T  24937831 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagcaacttcctctcaaacccccgatgtctttcaaagtcaaactg 24937930  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||    
T  24937931 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaatcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 24938030  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||    
T  24938031 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtccctcaaaggcttgct 24938130  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||| |||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  24938131 aagcttaaactcatagtgattgagagtgtttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggagagaatctcaggt 24938230  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24938231 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 24938330  T
Q  508 atgagttttattgcttttattttgt---------ttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    |||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||    
T  24938331 atgagttttattgcttttattttgtttttttttgttgttttgtaggtatttgtccaaatatgatgcg 24938397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Complemental strand, 23713615 - 23713051
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  23713615 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgatgtctttcaaagtcaaactg 23713516  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||| | |||| ||||||||||||||||||||||||||||||    
T  23713515 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaataagttagaggaccccattacgaaaactaagacaattgagggtgagataga 23713416  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||| || |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  23713415 gagtgaaaagcaacaaggtgagaaagtcataggagagggtaataaaccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 23713316  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  23713315 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgacaaagctatgtgtgatttgggagagaatctcaggt 23713216  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23713215 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 23713116  T
Q  508 atgagttttattgcttttattttgt-------ttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||| |       |||||||||||||||||||||||||||||||||    
T  23713115 atgagttttattgcttttatttttttgttttgttgttttgtaggtatttgtccaaatatgatgcg 23713051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 23603745 - 23603212
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  23603745 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaggtcaaactg 23603646  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  23603645 aagccaatcccaaagaccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 23603546  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||| || |||||||||| || ||||||||||||||||||||||||||||| |    
T  23603545 gagtgaaaagcaacaaggtgagaaagccataggagagagtgataagccaatcgtgtcaccaccttttaaactcaaaatccatgtcccacaaaggcttgtt 23603446  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  23603445 aagcctaacatcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctcaggt 23603346  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23603345 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 23603246  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  23603245 acgagtttaattgcttttattttgtttgttttgt 23603212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 565
Target Start/End: Complemental strand, 20447769 - 20447207
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  20447769 attgctactcacactagaatgctagaaactcaaatctctcaagtggcccaaaaagtatctacttccactcaagcccccgaagtctttccaagtcaaactg 20447670  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||| |||||| ||||| | | ||||||||||||||||||||| |||||||||||    
T  20447669 aagccaaccccaaaggccttataaatgctatgcaacttagggacggtaaccagttaaaggaccccaatatgaaaactaagacaattgatggtgagataga 20447570  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  20447569 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaattgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 20447470  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  20447469 aagcctaacctcatagtgattgagagttttttcaccccttgtgtgattgagagtgaaaccattgagaaagctatgtgtgatttggaagagaatctcaggt 20447370  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20447369 tgatgccactatccctttgggaaagattg-------ggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 20447277  T
Q  508 atgagttttattgctttta------------ttttgtttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    | |||||| ||||||||||            |||| ||||||||||||||||||||||||||||||||||    
T  20447276 acgagtttaattgcttttatttagtttttttttttttttgttttgtaggtatttgtccaaatatgatgcg 20447207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 25182788 - 25182614
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  25182788 cattgagaaaaccatgtgtgatttgggagagaatgtcagtttgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtc 25182689  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||    
T  25182688 aagctaatgactctaaaagagcgctttgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 25182614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 362 - 541
Target Start/End: Complemental strand, 21283391 - 21283212
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||  | |    
T  21283391 gaaagcattgagaaagccatgtctgatttgggagagaatgtcaggttgatgccattatccctttgggaaagattgggtatagggtagagaaacctcttga 21283292  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  21283291 ttgtcaagctaatgactctaaacgagcgcttcgtgggaggcaacccatgagttttattgcttttactttgtttgttttgt 21283212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 362 - 541
Target Start/End: Original strand, 24217500 - 24217679
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||| ||||||||||||||||  |||| |||||||| ||||||||||||||||||||||||| ||||||||||||||  | |    
T  24217500 gaaagcattgagaaagccatgtctgatttgggagagaatgccaggctgatgccattatccctttggaaaagattgggtatagggtagagaaacctcttga 24217599  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||||| ||||||||||||||    
T  24217600 ttgtcaagctaatgactctaaacgagcgctttgtggcaggcaacccatgagttttattgcttttactttgtttgttttgt 24217679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 361 - 541
Target Start/End: Complemental strand, 18488731 - 18488551
Alignment:
Q  361 tgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttcta 460  Q
    ||||| |||||| ||| | |||||||||||||||||||||  ||||||||| ||  ||||||||||| ||||||||||||| ||||||||||||||  |     
T  18488731 tgaaagcattgagaaagccatgtgtgatttgggagagaatgccaggttgataccgttatccctttgggaaagattgggtatagggtagagaaacctcttg 18488632  T
Q  461 atcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    || ||||||||||||||| |||| |||| |||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  18488631 attgtcaagctaatgactttaaacgagcacttcgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 18488551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 20598987 - 20598812
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  20598987 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 20598888  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  20598887 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 20598812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 20605284 - 20605109
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  20605284 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 20605185  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  20605184 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 20605109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 20611603 - 20611428
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  20611603 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 20611504  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  20611503 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 20611428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 20793892 - 20793717
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||   ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  20793892 cattgagaaagccatgtgtgatttgggagagaatgctaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 20793793  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  20793792 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 20793717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 380 - 539
Target Start/End: Complemental strand, 23522233 - 23522074
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  ||||||||||||| || |||||||||| | | | | ||||||||||||||     
T  23522233 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgtgaaagattgggtataggatagagaaaccctttgaacatcaagctaatgactt 23522134  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| ||||||||    
T  23522133 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgtttt 23522074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 380 - 534
Target Start/End: Complemental strand, 21242099 - 21241945
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||||||||| |||||||||| |||  | ||||||||||||||||||     
T  21242099 atgtgtgatttgggagagaatgccaggttgacgccgttatccctttgggaaagattgggtatagggtagagaagcctcttgatcgtcaagctaatgacta 21242000  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  21241999 taaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 21241945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 534
Target Start/End: Original strand, 23745108 - 23745262
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  ||||||||||||| || |||||||||||  | | ||||||||||||||||     
T  23745108 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgtgaaagattgggtataggatagagaaacctcttgaacgtcaagctaatgacta 23745207  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  23745208 taaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 23745262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 380 - 539
Target Start/End: Original strand, 26844730 - 26844889
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||| ||||| |||||| |||  ||||||||| | ||||||||  |||||||||||||  | |||||||||| | | ||||||||||||||||||     
T  26844730 atgtgtgacttgggggagaatgtcaacttgatgccattgtccctttgtgaaagattgggtatatgatagagaaaccctttgatcgtcaagctaatgactt 26844829  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| ||||||||    
T  26844830 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgtttt 26844889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 362 - 533
Target Start/End: Original strand, 18069953 - 18070123
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||||||||| ||||||| || |||  | |    
T  18069953 gaaagcattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccgttatccctttgggaaagattgggtatagggtagaaaagcctcttga 18070052  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    |||||||||||| |||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||    
T  18070053 tcgtcaagctaa-gactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtt 18070123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 18069567 - 18069703
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  18069567 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 18069666  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  18069667 ttctattattcttagggatggtaaccaattagaggac 18069703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 38 - 206
Target Start/End: Complemental strand, 20794278 - 20794110
Alignment:
Q  38 caaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaattcta 137  Q
    |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| ||||| |||||    
T  20794278 caaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataagttcta 20794179  T
Q  138 ttcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatag 206  Q
    ||   |||||||| ||||| || |||||||||   ||| |||||| |||||  | |||||| |||||||    
T  20794178 ttattcttagggatggtaaccaattagaggacctcattgtgaaaattaagaacaatgagggagagatag 20794110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 32 - 206
Target Start/End: Complemental strand, 21283778 - 21283604
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||    
T  21283778 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataa 21283679  T
Q  132 attctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatag 206  Q
     |||||||   |||||||| ||||| || ||||||||| |  || |||||| |||||  | |||||| |||||||    
T  21283678 gttctattactcttagggatggtaaccaattagaggaccccgttgtgaaaattaagaacaatgagggagagatag 21283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 20599378 - 20599242
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| ||  ||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  20599378 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccatcgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 20599279  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  20599278 ttctattattcttagggatggtaaccaattagaggac 20599242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 20605675 - 20605539
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| ||  ||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  20605675 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccatcgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 20605576  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  20605575 ttctattattcttagggatggtaaccaattagaggac 20605539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 33 - 169
Target Start/End: Complemental strand, 20611994 - 20611858
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| ||  ||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  20611994 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccatcgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 20611895  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  20611894 ttctattattcttagggatggtaaccaattagaggac 20611858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 24217113 - 24217352
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| |  |||   |||||||| ||||||||||| ||||||||||||||| |||||    
T  24217113 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaactaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataa 24217212  T
Q  132 attctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaa 231  Q
     |||||||   |||||||| ||||| || ||||||||| |  || |||||| |||||  | |||||| |||||||  |||||  |||  |||  ||||||    
T  24217213 gttctattgctcttagggatggtaaccaattagaggaccccgttgtgaaaattaagaacaatgagggagagataggaagtgatgagcctcaaagtgagaa 24217312  T
Q  232 ggtcataggagagagtgataagccaatagtttcaccacct 271  Q
        |||||||||| ||| |||||| | ||||||||||||    
T  24217313 aactataggagagaatgaaaagccatttgtttcaccacct 24217352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 539
Target Start/End: Original strand, 22945545 - 22945619
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||| |||| ||||||||| ||||| ||||||||  ||||| |||| ||||||||||||||||||    
T  22945545 tcaagctaatgactttaaatgagcgcttcatgggaggcaacccacaagtttaattgtttttattttgtttgtttt 22945619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 534
Target Start/End: Original strand, 21385399 - 21385476
Alignment:
Q  457 tctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    ||||| ||||||||||||||||||||||||| | ||||||||| |||||||| |  ||| ||||||||| ||||||||    
T  21385399 tctaaccgtcaagctaatgactctaaaagagagtttcgtgggaggcaacccaagcatttaattgcttttgttttgttt 21385476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 24966286 - 24966241
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||    
T  24966286 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaaccca 24966241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 465 - 562
Target Start/End: Original strand, 26780397 - 26780493
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatgat 562  Q
    |||||||||||||| ||||  |||||||||||||| |||| ||| |  ||| | ||||||| ||||| |||||||||||||| |||||| | ||||||    
T  26780397 tcaagctaatgactataaagaagcgcttcgtgggaggcaaaccacgcatttaactgcttttgttttg-ttgttttgtaggtaattgtccgagtatgat 26780493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 22320548 - 22320477
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  22320548 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 22320477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 532 - 563
Target Start/End: Original strand, 24217690 - 24217721
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatg 563  Q
    ||||||||||||||||||||||||||||||||    
T  24217690 tttgttttgtaggtatttgtccaaatatgatg 24217721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 30766227 - 30766156
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  30766227 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 30766156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 22944496 - 22944534
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagt 63  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  22944496 aatgctagaagctcaaatctctcaagtagcccaacaagt 22944534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 25119281 - 25119236
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  25119281 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 25119236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 25178372 - 25178327
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  25178372 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 25178327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 20619292 - 20619336
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||| ||||  |||||||||||||| ||||||||    
T  20619292 gtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 20619336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 22854371 - 22854415
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  22854371 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaaccca 22854415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 454; Significance: 0; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 10451008 - 10450475
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  10451008 attgctactcacactagaatgctagaaactcaaatttctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 10450909  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  10450908 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 10450809  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10450808 gagtgaaaagcaacaaggtgagaaagtcataggatagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 10450709  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10450708 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggagagaatctcaggt 10450609  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10450608 tgatgccactatccctttgggaacgattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 10450509  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | | ||||||||||||||||||||||||||||||    
T  10450508 acgtgttttattgcttttattttgtttgttttgt 10450475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 9580177 - 9580710
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  9580177 attgctactcacactagaatggtagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgatgtctttcaaagtcaaactg 9580276  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9580277 aagccaaccccaaagaccttataaatgctattcaacttagggatggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 9580376  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  9580377 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 9580476  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9580477 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 9580576  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9580577 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgtttcgtgggaggcaaccc 9580676  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||||||||| |||||||||||||| |||||    
T  9580677 atgagttttattgtttttattttgtttgctttgt 9580710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 9728045 - 9728578
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  9728045 attgctactcacactagaatggtagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgatgtctttcaaagtcaaactg 9728144  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  9728145 aagccaaccccaaagaccttataaatgctattcaacttagggatggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 9728244  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  9728245 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 9728344  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9728345 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 9728444  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9728445 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgtttcgtgggaggcaaccc 9728544  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||||||||| |||||||||||||| |||||    
T  9728545 atgagttttattgtttttattttgtttgctttgt 9728578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 435; E-Value: 0
Query Start/End: Original strand, 8 - 534
Target Start/End: Complemental strand, 16152895 - 16152369
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||||||    
T  16152895 attgctattcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctccaaccctcgaagtctttccaggtcaaactg 16152796  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16152795 aagccaaccccaaaagccttataaatgctattcaacttagggacggtaagcagttagaggacaccattatgaaaactaagacaattgagggtgagataga 16152696  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  16152695 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 16152596  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16152595 aagcctaacttcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaagctatgtgtgatttgggagagaatctcaggt 16152496  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16152495 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 16152396  T
Q  508 atgagttttattgcttttattttgttt 534  Q
    | | |||| |  |||||| ||||||||    
T  16152395 acgggtttaaccgcttttgttttgttt 16152369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 8 - 525
Target Start/End: Complemental strand, 15288558 - 15288041
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||    
T  15288558 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaaccctcgaagtctttcgaggtcaaactg 15288459  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  15288458 aagccaaccccaaaagccttgtaaatgctattcaacttagggacggtaagcagttagagggcaccattatgaaaactaagacaattgagggtgagataga 15288359  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  15288358 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 15288259  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15288258 aagcctaacatcatagtgattgagagtttttccaccccttgtgttattgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctcaggt 15288159  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||    
T  15288158 tgatgccactatccctttgggaaagattaggtattgggtagagaaaccttataatcgtcaagctaatgactctaaaaaagcgcttcgtgggaggtaaccc 15288059  T
Q  508 atgagttttattgctttt 525  Q
    ||||||||||||||||||    
T  15288058 atgagttttattgctttt 15288041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 8 - 508
Target Start/End: Complemental strand, 12656 - 12156
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| | |||||||||    
T  12656 attgctactcacactagaatgctagaaactcaaatttctcaagtagcccaaaaagtagctacttcctctcaaacccccgatgtctttcaatgtcaaactg 12557  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  12556 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggacaccattatgaaaactaagacaattgagggagagataga 12457  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  12456 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 12357  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  12356 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgtaaaaactatgtgtgatttgggagagaatctcaagt 12257  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| |||||||    
T  12256 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctattcgtcaagctaatgactttaaacgagcgcttcgtgggaggcaaccc 12157  T
Q  508 a 508  Q
    |    
T  12156 a 12156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 12564135 - 12564668
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||| | |||||||||||||||||||||||||    
T  12564135 attgctactcacactagaatgctagaaactcaaatctctcaagtagccccacaagaagctacttcctctcaaactcccgaagtctttccaagtcaaactg 12564234  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    || |||||||||||||| |||| ||| |  |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||| ||||||||||||    
T  12564235 aaaccaaccccaaaggcattattaatgcacttcaacttagggacggtaagcaattagaggaccccattatgaaaactaagacaattgtgggtgagataga 12564334  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  12564335 gagtgaaaagcaacaaggtgagaaagtcataggatagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 12564434  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||| ||||| |||| |    
T  12564435 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattaagagtgaaaccattgagaaagccatgtgtgatttgggaaagaatgtcagtt 12564534  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||| | ||||||||  ||||||||||||| ||||||||||||||  | || ||||||||||||||| |||| |||||||||||| || |||||||    
T  12564535 tgatgccattttccctttgtgaaagattgggtatagggtagagaaacctcttgattgtcaagctaatgactttaaacgagcgcttcgtgagaggcaaccc 12564634  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    |  ||||| |||||||||||||||||||||||||    
T  12564635 acaagtttaattgcttttattttgtttgttttgt 12564668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 8 - 565
Target Start/End: Original strand, 4309779 - 4310346
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||| ||||||||||| ||| ||||| |||||||||||||||||| ||||| ||||||||||||||||| || ||| || |||||||||||| |||||||    
T  4309779 attgatactcacactaaaatactagagactcaaatctctcaagtatcccaacaagtagctacttcctctaaaaccctcggagtctttccaagccaaactg 4309878  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||||||    
T  4309879 aagccaatcccaaaggccttataaatgctattcaacttagggacggtacgcagttagaggaccccattatgaaagctaagacaattgagggtgagataga 4309978  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    |||||||||||| |||| |||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||||| ||    
T  4309979 gagtgaaaagcagcaaggtgagaaagtcataggagagggtgataagccaattgtttcaccaccttataaactcaaaattcatttcccacaaaggctttct 4310078  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | |||   ||||||||| | || || | | | || |    
T  4310079 aagcctaacctcatagtgattgagagtttttcca-cccttgtttgattgagagtgaaaccattaagaaagtcatgtgtgatctaggggatagtgttagtt 4310177  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    | ||| || | ||||||| | ||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  4310178 ttatgtcattgtccctttaggaaagatttgatattgggtagagaaaccttctaatcttcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 4310277  T
Q  508 atgagttttattgcttttattttg-----------tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    | |  ||| | ||||||| |||||           ||| ||||||||||||||||||||||||||||||    
T  4310278 acgcatttaactgcttttgttttgtgttgttttaatttattttgtaggtatttgtccaaatatgatgcg 4310346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 8 - 530
Target Start/End: Complemental strand, 8785230 - 8784708
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||  || ||||||     
T  8785230 attgctagtcacactagaatgatagaaactcaaatctctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttctgagccaaacta 8785131  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  8785130 aagccaacctcaaaggccttataaatgctattaaacttagggacgataagcagttagaggaccccattatgaaaactaagacaattgagtgtgagataga 8785031  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
     || ||||| |  |||  |||||| | ||||||||| |||||| ||||||| |||||||||||  ||| ||||||||| ||| | ||||||||||||| |    
T  8785030 aagcgaaaaactgcaaagtgagaaagccataggagaaagtgatgagccaattgtttcaccaccccataaactcaaaattcatttaccacaaaggcttgat 8784931  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    || |||||  ||| ||||||||||||||| ||||| ||||||||||||| ||| ||||||||| |  || | |||||| || | || || | | | || |    
T  8784930 aaacctaacctcagagtgattgagagtttttccacaccttgtgtgattgggagcgaaaccattaaggaagccatgtgtaatctaggggatagtgttagtt 8784831  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||| | ||| ||||  |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||||| |||| ||||| |    
T  8784830 tgatgccattgtccgtttgtgaaaggttgggtatagggtagagaaaccttctaatcgtcaagctaatgactttaaacgagcacttcgcgggaggcaacgc 8784731  T
Q  508 atgagttttattgcttttatttt 530  Q
    | |||||||||||||||||||||    
T  8784730 acgagttttattgcttttatttt 8784708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 158; E-Value: 9e-84
Query Start/End: Original strand, 157 - 542
Target Start/End: Original strand, 16384217 - 16384602
Alignment:
Q  157 gcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcataggagagagtgataagcca 256  Q
    ||||||||||||| || ||||| |||||||||||||||||||||||||||||||  |||| | ||||| |||||| | ||||||||| | ||||||||||    
T  16384217 gcagttagaggaccctgttatgtaaactaagacaattgagggtgagatagagagctaaaaaccacaaggtgagaaagccataggagaaaatgataagcca 16384316  T
Q  257 atagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagtgattgagagtttctccaccccttgtgtgattg 356  Q
     | |||||||||||||||| || |||||| | | ||||||||| |||||||||||||||  ||| |||||||| |||||| |||||||||||||||||||    
T  16384317 gttgtttcaccaccttataaacccaaaattcctttcccacaaaagcttgctaagcctaagctcagagtgattgggagtttttccaccccttgtgtgattg 16384416  T
Q  357 agagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacct 456  Q
     ||||||||||||| | ||| ||| ||||||| | || |  | | |||| ||||||||| | ||||||||  |||| ||| |||| ||||||||||||||    
T  16384417 ggagtgaaaccattaagaaagctacgtgtgatctaggggctagtgtcagtttgatgccattgtccctttgtgaaaggttgagtatagggtagagaaacct 16384516  T
Q  457 tctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgta 542  Q
    |||||  || |||||||||| | |||| ||||| ||||||||| | ||||||||||||| |||||||||||||| || ||||||||    
T  16384517 tctaacagtaaagctaatgagtttaaacgagcgtttcgtgggaggaaacccatgagtttaattgcttttatttttttagttttgta 16384602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 361 - 541
Target Start/End: Original strand, 13633185 - 13633365
Alignment:
Q  361 tgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttcta 460  Q
    |||||||||||| ||| | ||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||  |     
T  13633185 tgaaaccattgagaaagccatgtgtgatttgggagagaatgttaggttgatgccattatccctttgggaaagattgggtatagggtagagaaacctcttg 13633284  T
Q  461 atcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    || ||||||||||||||| |||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||||||    
T  13633285 attgtcaagctaatgactttaaacgagcgcttcgtgggaggaaacccacgagtttaattgcttttattttgtttgttttgt 13633365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 361 - 541
Target Start/End: Original strand, 13739865 - 13740045
Alignment:
Q  361 tgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttcta 460  Q
    |||||||||||| ||| | ||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||  |     
T  13739865 tgaaaccattgagaaagccatgtgtgatttgggagagaatgttaggttgatgccattatccctttgggaaagattgggtatagggtagagaaacctcttg 13739964  T
Q  461 atcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    || ||||||||||||||| |||| ||||||||||||||| | |||||| |||||| |||||||||||||||||||||||||    
T  13739965 attgtcaagctaatgactttaaacgagcgcttcgtgggaggaaacccacgagtttaattgcttttattttgtttgttttgt 13740045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 25 - 315
Target Start/End: Complemental strand, 4327876 - 4327586
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggc 124  Q
    |||| |||| |||||||| ||||||||||||||| || ||||  ||||||| ||| || ||  | |||||||  |||||||  ||| ||||||||||| |    
T  4327876 aatgttagagactcaaatatctcaagtagcccaataaatagcctcttcctcacaaacctccagaatctttccgggtcaaacataagacaaccccaaagac 4327777  T
Q  125 cttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaag 224  Q
    | ||||||| |||||  ||||||||| |||||||| ||||| ||| |  || |||||||||||||||||||| |||||||||| |||||||| |  |||     
T  4327776 catataaatgctattacacttagggatggtaagcaattagaagaccccgttgtgaaaactaagacaattgagagtgagatagaaagtgaaaaaccgcaaa 4327677  T
Q  225 ctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaa 315  Q
     | |||| | ||||||||||| ||||||||||||  ||||||||||| |||  |||||||| ||| | |||||||||||||||||||||||    
T  4327676 gttagaaagccataggagagaatgataagccaattatttcaccacctcataagctcaaaattcattttccacaaaggcttgctaagcctaa 4327586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 362 - 539
Target Start/End: Complemental strand, 542689 - 542512
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | ||||||||||||||||||||| ||||||||| |||  ||||||||||| |||| |||||||| ||||||||||||||  | |    
T  542689 gaaagcattgagaaagccatgtgtgatttgggagagaatgtcaggttgacgccgttatccctttgggaaaggttgggtatagggtagagaaacctcttga 542590  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | ||||| ||||||||| |||| ||||||||||||||| |||||||| | |||| |||||||||||||||||||||||    
T  542589 ttgtcaaactaatgactttaaacgagcgcttcgtgggaggcaacccacgggtttaattgcttttattttgtttgtttt 542512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 362 - 541
Target Start/End: Complemental strand, 14224356 - 14224176
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | ||||||||||||||||||||| ||||||||| |||  ||||||||| | ||||||||||||| ||||||||||||||  | |    
T  14224356 gaaagcattgagaaagccatgtgtgatttgggagagaatgtcaggttgacgccgttatccctttcggaaagattgggtatagggtagagaaacctcttca 14224257  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgctttta-ttttgtttgttttgt 541  Q
    | ||||||||||||||| |||| |||||||| |||||| |||||||| | |||| |||||||||| |||||||||||||||    
T  14224256 ttgtcaagctaatgactttaaacgagcgctttgtgggaggcaacccacgggtttaattgcttttatttttgtttgttttgt 14224176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 362 - 539
Target Start/End: Complemental strand, 16328438 - 16328261
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||| |||||||||||||||| ||||||||| ||   ||||||||||| || |||||||||| ||||||||||||||  | |    
T  16328438 gaaagcattgagaaagccatgtctgatttgggagagaatgtcaggttgacgctgttatccctttgggaatgattgggtatagggtagagaaacctcttga 16328339  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | ||| ||||||||||| |||| ||||||||||||||| ||||||||   |||| |||||||||||||||||||||||    
T  16328338 ttgtccagctaatgactttaaacgagcgcttcgtgggaggcaacccacaggtttaattgcttttattttgtttgtttt 16328261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 367 - 534
Target Start/End: Original strand, 14548147 - 14548314
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||   ||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  14548147 cattgagaaagccatgtgtgatttgggagagaatgctaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 14548246  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  14548247 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcttttaactgcttttgttttgttt 14548314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 380 - 534
Target Start/End: Original strand, 8714951 - 8715105
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| |||||| || ||||||||||| ||||||||||||| ||||||||||||||  | | ||||||||||||||||     
T  8714951 atgtgtgatttgggggagaatgtcagtttgatgtcattatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtcaagctaatgacta 8715050  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    ||||  |||||||||||||| |||||||| |  ||| ||||||||| ||||||||    
T  8715051 taaagaagcgcttcgtgggaggcaacccacgcttttaattgcttttgttttgttt 8715105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 380 - 563
Target Start/End: Original strand, 23512773 - 23512952
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||||| ||| ||||||||||||||  | | ||||||||||||||||     
T  23512773 atgtgtgatttgggagagaatgccaggttgacgccgttatccctttgggaaagattggatatagggtagagaaacctcttgaacgtcaagctaatgacta 23512872  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgtaggtatttgtccaaatatgatg 563  Q
    ||||  |||||||||||||| |||||||| |  ||| | ||||||| |    |||||||||||||||||||||||| |||||||    
T  23512873 taaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgt----tttgttttgtaggtatttgtccaactatgatg 23512952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 177 - 315
Target Start/End: Complemental strand, 4463392 - 4463254
Alignment:
Q  177 tgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatag 276  Q
    |||||||||| |||||||||||||||||| |||||||||| | ||||  | |||| | |||||||||||||||| ||||||| |||||||||||| |||     
T  4463392 tgaaaactaaaacaattgagggtgagatatagagtgaaaaactacaaagtaagaaagccataggagagagtgatgagccaattgtttcaccacctcataa 4463293  T
Q  277 actcaaaatccatgtcccacaaaggcttgctaagcctaa 315  Q
    || |||||| | | |||||||||||||||||||||||||    
T  4463292 acccaaaattcctttcccacaaaggcttgctaagcctaa 4463254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 10437298 - 10437216
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagt 90  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  10437298 attgctactcacactagaatgctagaaactcaaatttctcaagtagcccaacaagtagctacttcctctcaaacccccgaagt 10437216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 8 - 169
Target Start/End: Complemental strand, 4463750 - 4463589
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||  | |||| |||| |||||| |||||||||||| |||| |||| ||||| ||||||||| |||||| ||| ||||   | |||||||    
T  4463750 attgctactcacaacaaaatgttagagactcaactctctcaagtagaccaacaagtggctacctcctctcaaacccccggagtatttcagggccaaactg 4463651  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||||||||||||||||||||| |||||   |||||||| |||||| |||||||||||    
T  4463650 aagccaaccccaaaggccttataaatgctattattcttagggatggtaagaagttagaggac 4463589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 823038 - 823196
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| |||||| || | ||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  823038 atgtgtgatttgggggagaatgtcagtttgatgtcattgtccctttgtgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 823137  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  823138 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 538
Target Start/End: Complemental strand, 15922766 - 15922608
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| || ||| |||| ||||||||| | ||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  15922766 atgtgtgatttgggggataatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 15922667  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  15922666 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 15922608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 429 - 534
Target Start/End: Complemental strand, 4463174 - 4463069
Alignment:
Q  429 aaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatt 528  Q
    |||| |||||||| || |||||||||||||||| | |||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||||||||| ||    
T  4463174 aaaggttgggtataggatagagaaaccttctaaccatcaagctaatgactttaaacgagcgcttcgtgggaggcaacccatgacttttattgcttttttt 4463075  T
Q  529 ttgttt 534  Q
    ||||||    
T  4463074 ttgttt 4463069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 15063169 - 15063327
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| || ||| |||| |||||| || | ||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  15063169 atgtgtgatttgggggataatgtcagtttgatgtcattgtccctttgtgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 15063268  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| |||| |||| |||| |||||||    
T  15063269 taaacgagcgcttcgtgggaggcaacccacgcatttaattgtttttgttttatttgttt 15063327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 23512368 - 23512505
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||    
T  23512368 gaaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataa 23512467  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   || ||||| ||||| || |||||||||    
T  23512468 gttctattattctcagggatggtaaccaattagaggac 23512505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 33 - 169
Target Start/End: Original strand, 14547756 - 14547892
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| ||  ||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  14547756 aaacccaaatctctcaagtggcccaacacgtgtctacttcctctcaaaccatcgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 14547855  T
Q  133 ttctattcaacttagggacggtaagcagttagaggac 169  Q
    |||||||   |||||||| ||||| || |||||||||    
T  14547856 ttctattattcttagggatggtaaccaattagaggac 14547892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 271
Target Start/End: Original strand, 13632809 - 13633038
Alignment:
Q  41 atctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaattctattc 140  Q
    ||||||||||| |||||| ||||  || ||||||||||| || ||  | |||||||| ||||||||||| ||||||||||||||| ||||| |||||||     
T  13632809 atctctcaagt-gcccaacaagtgactgcttcctctcaaaccaccagaatctttccaggtcaaactgaaaccaaccccaaaggccatataagttctatta 13632907  T
Q  141 aacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcatagg 240  Q
      |||| ||| ||||| || ||||||||| |  || |||||| |||||  | |||||| ||||||  ||||||  |||  |||  ||||||    |||||    
T  13632908 ctcttatggatggtaaacaattagaggaccccgttgtgaaaattaagaacaatgagggagagataaggagtgatgagcctcaaagtgagaaaactatagg 13633007  T
Q  241 agagagtgataagccaatagtttcaccacct 271  Q
    ||||| ||| |||||| | ||||||||||||    
T  13633008 agagaatgaaaagccatttgtttcaccacct 13633038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 41 - 271
Target Start/End: Original strand, 13739489 - 13739718
Alignment:
Q  41 atctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaattctattc 140  Q
    ||||||||||| |||||| ||||  || ||||||||||| || ||  | |||||||| ||||||||||| ||||||||||||||| ||||| |||||||     
T  13739489 atctctcaagt-gcccaacaagtgactgcttcctctcaaaccaccagaatctttccaggtcaaactgaaaccaaccccaaaggccatataagttctatta 13739587  T
Q  141 aacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcatagg 240  Q
      |||| ||| ||||| || ||||||||| |  || |||||| |||||  | |||||| ||||||  ||||||  |||  |||  ||||||    |||||    
T  13739588 ctcttatggatggtaaacaattagaggaccccgttgtgaaaattaagaacaatgagggagagataaggagtgatgagcctcaaagtgagaaaactatagg 13739687  T
Q  241 agagagtgataagccaatagtttcaccacct 271  Q
    ||||| ||| |||||| | ||||||||||||    
T  13739688 agagaatgaaaagccatttgtttcaccacct 13739718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 543076 - 542939
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||| | || |||   |||| ||| ||||||||||| ||||||||||||||| |||||    
T  543076 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcgaaccaccgggatcttcccaggtcaaactgaaaccaaccccaaaggccatataa 542977  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   |||||||| ||||| || ||| |||||    
T  542976 gttctattactcttagggatggtaaccaattaaaggac 542939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 15459202 - 15459331
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    ||||||||||| || || ||| |||  ||||||||| | ||||||||  ||||||||||||| || |||  ||||||| || |  |||||||||||||||    
T  15459202 atgtgtgatttaggggaaaatgtcaatttgatgccattgtccctttgtgaaagattgggtataggataggaaaacctttcttaatgtcaagctaatgact 15459301  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||| ||||    
T  15459302 ataaaggagcgcttcgtgggaggcatccca 15459331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 13670946 - 13671022
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  13670946 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 13671022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 18596417 - 18596341
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  18596417 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 18596341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 18615288 - 18615364
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  18615288 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 18615364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 443 - 508
Target Start/End: Complemental strand, 4327258 - 4327193
Alignment:
Q  443 gggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||| || | ||||||||||||||| |  |||||||||||| ||||||| ||||||||    
T  4327258 gggtagagaaacattttgatcgtcaagctaatggcgttaaaagagcgctgcgtgggaggcaaccca 4327193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 9580719 - 9580752
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  9580719 tttgttttgtaggtatttgtccaaatatgatgcg 9580752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 9728587 - 9728620
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  9728587 tttgttttgtaggtatttgtccaaatatgatgcg 9728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 12564679 - 12564712
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  12564679 tttgttttgtaggtatttgtccaaatatgatgcg 12564712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Complemental strand, 14224165 - 14224132
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  14224165 tttgttttgtaggtatttgtccaaatatgatgcg 14224132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 16328831 - 16328726
Alignment:
Q  26 atgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggcc 125  Q
    ||||| ||||| |||||||||||||| |||||| | ||  || ||||||||||| || | |   |||| ||| ||||||||||| |||||||||||||||    
T  16328831 atgcttgaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccactgggatcttcccaggtcaaactgaaaccaaccccaaaggcc 16328732  T
Q  126 ttataa 131  Q
     |||||    
T  16328731 atataa 16328726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 16384612 - 16384645
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  16384612 tttgttttgtaggtatttgtccaaatatgatgcg 16384645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 467 - 539
Target Start/End: Original strand, 20105387 - 20105459
Alignment:
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||| |||| ||||||||||||||| ||||||||    ||| | ||||||| |||||||||||||    
T  20105387 aagctaatgactataaaggagcgcttcgtgggaggcaacccacacatttaactgcttttgttttgtttgtttt 20105459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 11928317 - 11928271
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  11928317 tcgtcaagctagtgacgataaaagagcgcttcgtgggaggcaaccca 11928271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 533
Target Start/End: Complemental strand, 14147284 - 14147214
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||    
T  14147284 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccaagcatttaactgcttttgttttgtt 14147214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 13633376 - 13633409
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||| ||||    
T  13633376 tttgttttgtaggtatttgtccaaatatggtgcg 13633409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 13655081 - 13655126
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  13655081 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 13655126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 13740056 - 13740089
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||| ||||    
T  13740056 tttgttttgtaggtatttgtccaaatatggtgcg 13740089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 16468688 - 16468643
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16468688 cgtcaagctaatgactataaagaagcgcttcgtgggaagcaaccca 16468643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 16529138 - 16529183
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16529138 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 16529183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 442; Significance: 0; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 442; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 17816797 - 17817330
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  17816797 attgctactcacactagaatgctagaaactcaaatttctcaagtagcccattaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 17816896  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||    
T  17816897 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttaaaggaccccattatgaaaactaagacaattgagggtgagataga 17816996  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  17816997 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 17817096  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||    
T  17817097 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgagaaaacaatgtgtgatttgggagacaatctcaggt 17817196  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  17817197 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggtaaccc 17817296  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  17817297 acgagtttaattgcttttattttgtttgttttgt 17817330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 18190364 - 18189832
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  18190364 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 18190265  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||    
T  18190264 aagccaaccctaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattaagggtgagataga 18190165  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  18190164 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagtcaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 18190065  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||  | |||||||||||||||| ||||  ||||||||||||||||||||| |||| |    
T  18190064 aagcctaaacttatagtgattgagagtttttccaccccttgtgtg-gtaagagtgaaaccattgagaaaatcatgtgtgatttgggagagaatgtcagtt 18189966  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| |||||||    
T  18189965 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactttaaacgagtgcttcgtgggaggcaaccc 18189866  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  18189865 acgagtttaattgcttttattttgtttgttttgt 18189832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 8 - 533
Target Start/End: Complemental strand, 20096762 - 20096238
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  20096762 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgatgtctttcaaagtcaaactg 20096663  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  20096662 aagccaatcccaaaggccttctaaatgctattcaacttagggacggtaagcatttagagaacaccattatgaaaactaagacaattgagggtgagataga 20096563  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |    
T  20096562 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatagtttcacaaccttataaactcaaaatccatgtcccacaaaggcttgat 20096463  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20096462 aagcctaacatcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaagt 20096363  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  | |||||||||||| |||||||    
T  20096362 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaa-cgtcaagctaatgactataaagaaacgcttcgtgggaggcaaccc 20096264  T
Q  508 atgagttttattgcttttattttgtt 533  Q
    | |  ||| | ||||||| |||||||    
T  20096263 acgcatttaactgcttttgttttgtt 20096238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 465
Target Start/End: Complemental strand, 22069838 - 22069378
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  22069838 attgctactcacattagaatgctagaaactcaaatctctcaagtagcccataaagtagctacttcctctcaaacccccgatgtctttcaaagtcaaactg 22069739  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  22069738 aagccaaccccaaagaccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 22069639  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  22069638 gagtgaaaagcaacaaggtgaggaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 22069539  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtga---ttgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctca 404  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  22069538 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgttgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctta 22069439  T
Q  405 ggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgt 465  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22069438 ggttgatgccattatccctttgggaaagattgggtattgggtagagaaaccttctaatcgt 22069378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 19590312 - 19589780
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||| ||||||||||| ||||||||| || ||||| ||||||||||||||  ||||||||||||||||| || |||| || |||||||| ||||||||||    
T  19590312 attgatactcacactaaaatgctagagacccaaatgtctcaagtagcccagcaagtagctacttcctctaaaaccccaga-gtctttccgagtcaaactg 19590214  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||  ||||| |||||| | ||||||| |||||  ||||||||| |||||| | |||||||||    || |||||   |||| ||||||||||||||||||    
T  19590213 aaatcaacctcaaaggtcgtataaatgctattacacttagggatggtaagaaattagaggacctcgttgtgaaattcaagataattgagggtgagataga 19590114  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |||||||||||||||||    
T  19590113 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaattgtttcaccaccttataaactcaaaattcatttcccacaaaggcttgct 19590014  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||| ||||| |||||||||||||||| | ||| | ||||||||| | || |  ||| | || |    
T  19590013 aagcctaacctcatagtgattgagagtttttccaccccttttgtgactgagagtgaaaccattaagaaagccatgtgtgatatagggggtaatgttagtt 19589914  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||| | ||||||||| | ||||||||||| ||||||||||||||  | || ||||||||||||| | |||| ||||||||||||||| |||||||    
T  19589913 tgatgccattgtccctttgggagagattgggtatagggtagagaaacctcttgattgtcaagctaatgaatttaaacgagcgcttcgtgggaggcaaccc 19589814  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||| ||||||||||||||||||||    
T  19589813 acgagtttaattgattttattttgtttgttttgt 19589780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 25 - 538
Target Start/End: Original strand, 18975411 - 18975922
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggc 124  Q
    |||| |||| ||||||||||||||| |||||||| || | ||||| ||||||||| |||| ||| |||||||  | |||||||||||||||| |||||||    
T  18975411 aatgttagagactcaaatctctcaaatagcccaacaaatggctacctcctctcaaaccccagaaatctttccgggccaaactgaagccaaccgcaaaggc 18975510  T
Q  125 cttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaag 224  Q
    ||||||||| |||||  ||||||||| |||||||||| |||||||    || ||||||||||||||||||||||||||||||| |||||||| | ||||     
T  18975511 cttataaatgctattacacttagggatggtaagcagtcagaggacctcgttgtgaaaactaagacaattgagggtgagatagaaagtgaaaaaccacaaa 18975610  T
Q  225 ctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagt 324  Q
     |||||| | |||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| | |||||||||||||||||||||||||  | | ||     
T  18975611 gtgagaaagccataggagagagtgataagctaattgtttcaccaccttataaactcaaattcc-tttcccacaaaggcttgctaagcctaaccttagagg 18975709  T
Q  325 gattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctt 424  Q
        | |||||| | || |||||||||||||||||||||||||||||| ||| | | ||||||||| |  |  | |  ||| || |||||  | | || |    
T  18975710 tcccgggagttttttcatcccttgtgtgattgagagtgaaaccattgagaaagccacgtgtgatttagaggctagtaccagttttatgcctttgt-ccat 18975808  T
Q  425 tggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttt 524  Q
    ||  |||| ||| |||| ||||||||||| ||||||| |||||||||| ||||  ||| |||||||||||||||| | |||||| |||||||| || |||    
T  18975809 tgtgaaaggttgagtatagggtagagaaatcttctaaccgtcaagctagtgacgataatagagcgcttcgtgggagggaacccacgagttttactggttt 18975908  T
Q  525 tattttgtttgttt 538  Q
    ||||||||||||||    
T  18975909 tattttgtttgttt 18975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 12 - 564
Target Start/End: Complemental strand, 24391385 - 24390823
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    |||||||||  | |||| |||| ||||||||||||||| |||||||| |||| ||||| ||||||||| || | ||| | |||||| | |||||| ||||    
T  24391385 ctactcacaacaaaatgttagagactcaaatctctcaaatagcccaacaagtggctacctcctctcaaacctcagaaatatttccaggccaaactaaagc 24391286  T
Q  112 caaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagt 211  Q
    |||||||||||||||||||||| |||||  ||||||||| ||||||| |||| |||||||  || ||||||||||||||||||||||| ||||| | ||     
T  24391285 caaccccaaaggccttataaatgctattacacttagggatggtaagctgttacaggacaccgttgtgaaaactaagacaattgagggtaagataaaaagc 24391186  T
Q  212 gaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagc 311  Q
    ||||| | ||||  |||||| | ||||||||| |||||||||||||| |||||||||||| ||| || |||||| | | || |||||||| |||||| ||    
T  24391185 gaaaaaccacaaagtgagaaagccataggagatagtgataagccaattgtttcaccacctcataaacccaaaattcctttcacacaaaggattgctatgc 24391086  T
Q  312 ctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgat 411  Q
    ||||  | | ||     |  ||||| |||| ||||||||||||||||||||||||||||||  || | ||||||||| | || |  | | |||| |||||    
T  24391085 ctaacctaagaggtcccggaagtttttccatcccttgtgtgattgagagtgaaaccattgaggaagccatgtgtgatctaggggctagtgtcagtttgat 24390986  T
Q  412 gccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatga 511  Q
    ||   | |  |||||  ||||||| ||||| ||||||||||| ||||||| |||||||||| |||   |||||||||||||||||||| |||||||| ||    
T  24390985 gcgtttgt-tctttgtgaaagatttggtatagggtagagaaatcttctaaccgtcaagctagtgatcataaaagagcgcttcgtgggaggcaacccacga 24390887  T
Q  512 gttttattgcttttattttg-----------tttgttttgtaggtatttgtccaaatatgatgc 564  Q
     ||||| || ||||||||||           ||| |||||||||||||||||||||||||||||    
T  24390886 tttttactggttttattttgtgttatttaatttttttttgtaggtatttgtccaaatatgatgc 24390823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 380 - 541
Target Start/End: Original strand, 18847050 - 18847210
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||| |||||||||| |||  | || ||||||||||||||||    
T  18847050 atgtgtgatttgggagagaatgccaggttgatgccattatccctttgggaaagattgggtatagggtagagaa-cctcttgattgtcaagctaatgactc 18847148  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  18847149 taaacgagcgcttcgtgggaggcaacccatgagttttattgcttttactttgtttgttttgt 18847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 191 - 541
Target Start/End: Complemental strand, 24389123 - 24388774
Alignment:
Q  191 attgagggtgagatagagagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatg 290  Q
    ||||||||||||| ||| || ||||| | ||||  |||||| | |||||||||||||||||||||||| |||||||||||| ||  || |||||| | |     
T  24389123 attgagggtgagacagaaagcgaaaaaccacaaattgagaaagccataggagagagtgataagccaattgtttcaccacctcatgaacccaaaattcctt 24389024  T
Q  291 tcccacaaaggcttgctaagcctaaattcata-gtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatt 389  Q
    ||||||||||||||||||||||||   ||| | ||   ||| || || |||| ||||||||||||||||||| ||||||||||  || | ||||||||||    
T  24389023 tcccacaaaggcttgctaagcctagcctcagaggtccctga-agcttttccatcccttgtgtgattgagagtaaaaccattgaggaagccatgtgtgatt 24388925  T
Q  390 tgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcg 489  Q
    | || |  | | |||| ||||||||  | | ||||||  |||| |||||||| ||||||||||| ||||||| |||||||||| || |  |||||||||     
T  24388924 taggggctagtgtcagtttgatgcctttgt-cctttgtgaaaggttgggtatagggtagagaaatcttctaaccgtcaagctagtggccataaaagagca 24388826  T
Q  490 cttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||| |||||  |||||||||||||||| |  ||||||||||||||||||||    
T  24388825 cttcatgggagacaacccatgagttttactaattttattttgtttgttttgt 24388774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 380 - 529
Target Start/End: Original strand, 25955134 - 25955284
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    ||||||||||||||||||||| |||| ||||||||| | |||||| || ||||||||||||| ||||||||||||||  | || |||||||||||||||     
T  25955134 atgtgtgatttgggagagaatgtcagtttgatgccattgtcccttagggaaagattgggtatagggtagagaaacctcttgattgtcaagctaatgactt 25955233  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttt-tattgcttttattt 529  Q
    |||| ||||||||||||||| |||||||| ||||||  |||||||||||||    
T  25955234 taaacgagcgcttcgtgggaggcaacccacgagtttaaattgcttttattt 25955284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 460 - 539
Target Start/End: Complemental strand, 22064148 - 22064069
Alignment:
Q  460 aatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| | |||| |||||||||||||||||||||||    
T  22064148 aatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaacccacgggtttaattgcttttattttgtttgtttt 22064069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 18445674 - 18445832
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||| ||||| | ||||||||  ||||||||||||| || |||| ||||| | | |||||||||||||||||      
T  18445674 atgtgtgatttgggggagaatgtcagtttggtgccattgtccctttgtgaaagattgggtataggatagataaaccctttgatcgtcaagctaatgacat 18445773  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| | |||||| |  ||| | ||||||| |||| |||||||    
T  18445774 taaacgagcgcttcgtgggaggaaacccacgcatttaactgcttttgttttatttgttt 18445832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 32 - 169
Target Start/End: Complemental strand, 23345156 - 23345019
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    |||||||||||||| |||| | ||||| |||| ||| ||||||||||| |||| |||||||| ||| || ||||||||||||||||||||| || |||||    
T  23345156 gaaactcaaatctcccaagcaacccaacaagtggctgcttcctctcaaaccccggaagtcttcccaggttaaactgaagccaaccccaaagcccatataa 23345057  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
    || |||||   |||||||| ||||| || ||| |||||    
T  23345056 atactattacccttagggatggtaaacaattaaaggac 23345019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 29683696 - 29683779
Alignment:
Q  458 ctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||| |||| || |||||||| |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||| ||||||    
T  29683696 ctaaccgtccaggtaatgactttaaacgagcgcttcgtgggaggcaacccacgagtttaattgcttttattttgtttattttgt 29683779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 456 - 541
Target Start/End: Complemental strand, 23520906 - 23520821
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||| ||||||||||||||||||||| ||||||||| ||||| |||||||| || ||| || |||||  |||||||||||||||    
T  23520906 ttctaaccgtcaagctaatgactctaaatgagcgcttcatgggaggcaacccacgaatttaatcgctttatttttgtttgttttgt 23520821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 18846645 - 18846782
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || || |||||||| || |||   |||||||| ||||||||| | ||||||||||||||| |||||    
T  18846645 gaaacccaaatctctcaagtggcccaacacgtgactgctacctctcaaaccaccgggatctttccaggtcaaactggaaccaaccccaaaggccatataa 18846744  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   |||||||| ||||| || |||||||||    
T  18846745 gttctattactcttagggatggtaaccaattagaggac 18846782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 22596225 - 22596142
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| | |||||||||||||||| ||||||| ||| |||||| |||||||| |  ||| | |||||||||||||||||||||    
T  22596225 ttctaaccctcaagctaatgactcttaaagagcactttgtgggacgcaacccacgcatttaactgcttttattttgtttgtttt 22596142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 25954729 - 25954968
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| || ||  |||| | | ||||||||||| || | | | |||||||| ||||||||||| ||||||||||| ||| |||||    
T  25954729 gaaacccaaatctctcaagtggcacatcaagtggttgcttcctctcaaaccactgtaatctttccaggtcaaactgaaaccaaccccaaatgccatataa 25954828  T
Q  132 attctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaa 231  Q
     | |||||   |||||||| ||||| || ||||||||| |  || |||||  |||||  | |||||| ||||||| ||||||  |||   ||  ||||||    
T  25954829 gtgctattactcttagggatggtaaacaattagaggaccccgttgtgaaagttaagaacaatgagggagagatagggagtgatgagcctaaaagtgagaa 25954928  T
Q  232 ggtcataggagagagtgataagccaatagtttcaccacct 271  Q
     | |||||||| || ||| |||||| | ||||||||||||    
T  25954929 agccataggagggaatgaaaagccacttgtttcaccacct 25954968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 23521866 - 23521752
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||| |||| |||||| ||||||||| |||| ||||| || ||| | || |||||||| |||||| |  | | |||||||||  ||||||| |    
T  23521866 attgctactcatactaaaatgcttgaaactcaagtctcccaagtggctcaagaggtggctacttcttctcaaacatcgggagtctttcctggtcaaaccg 23521767  T
Q  108 aagccaaccccaaag 122  Q
    |||||||||||||||    
T  23521766 aagccaaccccaaag 23521752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 20019365 - 20019289
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  20019365 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 20019289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 20103924 - 20104000
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  20103924 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 20104000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 27960855 - 27960811
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||    
T  27960855 gtcaagctaatgactctaaaagagcgtttcgtgggaggcaaccca 27960811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 2654011 - 2654056
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||    
T  2654011 cgtcaagctaatgactataaaggagcgcttcgtgggaggcaaccca 2654056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 17817342 - 17817375
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  17817342 tttgttttgtaggtatttgtccaaatatgatgcg 17817375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 25955302 - 25955335
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  25955302 tttgttttgtaggtatttgtccaaatatgatgcg 25955335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 562
Target Start/End: Complemental strand, 16152873 - 16152769
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgc-----ttttattttgtttgttttgtaggtatttgtccaaat 557  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | |||     |||| |||||||||||||||||||| |||||| | |    
T  16152873 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgtatttaactgcttttgttttgttttgtttgttttgtaggtaattgtccgagt 16152774  T
Q  558 atgat 562  Q
    |||||    
T  16152773 atgat 16152769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 8727109 - 8727038
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| |||   |||||||||||||| ||||||||||  ||| | ||||||| ||||||||    
T  8727109 cgtcaagctaatgactataaggaagcgcttcgtgggaggcaacccatgcatttaactgcttttgttttgttt 8727038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 15698348 - 15698394
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||||||    
T  15698348 tcgtcaagctagtgacgctaacagagcgcttcgtgggaggcaaccca 15698394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 15851397 - 15851351
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  15851397 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 15851351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Original strand, 22242613 - 22242659
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  22242613 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 22242659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 10716637 - 10716592
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  10716637 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 10716592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 11216976 - 11217021
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  11216976 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 11217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 18008971 - 18009016
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  18008971 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 18009016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 20166339 - 20166436
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaag 122  Q
    |||||| ||||| |||||||| |||||||||||| |||| || || || |||||| | || | |||||||||  | ||||||||| | ||||||||||    
T  20166339 aatgcttgaaacacaaatctcccaagtagcccaacaagtggccacctcttctcaaacaccaggagtctttcctggacaaactgaaacaaaccccaaag 20166436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 20167320 - 20167365
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  20167320 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 20167365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 22168703 - 22168658
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  22168703 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 22168658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 24858331 - 24858286
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  24858331 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 24858286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 536 - 564
Target Start/End: Original strand, 18847225 - 18847253
Alignment:
Q  536 ttttgtaggtatttgtccaaatatgatgc 564  Q
    |||||||||||||||||||||||||||||    
T  18847225 ttttgtaggtatttgtccaaatatgatgc 18847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 368
Target Start/End: Original strand, 29683203 - 29683239
Alignment:
Q  332 agtttctccaccccttgtgtgattgagagtgaaacca 368  Q
    |||||||||| |||||||||||||| |||||||||||    
T  29683203 agtttctccatcccttgtgtgattgggagtgaaacca 29683239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 429; Significance: 0; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 8 - 539
Target Start/End: Complemental strand, 15350935 - 15350401
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  15350935 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaggtcaaactg 15350836  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  15350835 aagccaaccccaaagaccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 15350736  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  15350735 gagtgaaaagcaacaaggtgaggaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 15350636  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtga---ttgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctca 404  Q
    ||||||||  ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  15350635 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgttgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctta 15350536  T
Q  405 ggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15350535 ggttgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaa 15350436  T
Q  505 cccatgagttttattgcttttattttgtttgtttt 539  Q
    |||| | |||| |||||||||||||||||||||||    
T  15350435 cccacgggtttaattgcttttattttgtttgtttt 15350401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 12 - 541
Target Start/End: Complemental strand, 15449323 - 15448795
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  15449323 ctactcacactagaatgctagaaactcaaatctctcaagtagcccagcaagtagctacttcctctcaaacccc-gaagtctttccaagtcaaactgaagc 15449225  T
Q  112 caaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagt 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||    
T  15449224 caaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactatgacaattgagggtgagatagagagt 15449125  T
Q  212 gaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagc 311  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15449124 gaaaagcaacaaggtgagaaagtcataggagagattgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgctaagc 15449025  T
Q  312 ctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgat 411  Q
    ||||  ||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||  |||||||||||||||||||||||| ||||||||    
T  15449024 ctaacctcatagtgattgagagttttttcaccccttgtgtgattaagagtgaaaccattgagaaagttatgtgtgatttgggagagaatctaaggttgat 15448925  T
Q  412 gccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatga 511  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||    
T  15448924 gccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgttggaggcaacccacga 15448825  T
Q  512 gttttattgcttttattttgtttgttttgt 541  Q
    |||| ||||||||||| |||||||||||||    
T  15448824 gtttaattgcttttatcttgtttgttttgt 15448795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 410; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 11499679 - 11499146
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11499679 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 11499580  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  11499579 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 11499480  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11499479 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 11499380  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||| |  ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||| ||||||||||||||  |||||    
T  11499379 aagcctcacctcacagtgattgagagtttttccaccccttgtgtgattgagcgtgaaaccattgagaaagctatgtgttatttgggagagaatgccaggt 11499280  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||||| ||| || ||||| ||||||||||||| ||||||||||||||  | || |||||||||||||||||||||||||||||||||||| |||||||    
T  11499279 tgatgccgctacccatttgggaaagattgggtatagggtagagaaacctcttgattgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 11499180  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  11499179 acgagtttaattgcttttattttgtttgttttgt 11499146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Original strand, 18289218 - 18289751
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||  ||||||    
T  18289218 attgctactcacactagaatgctagaaactcacatctctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccaagataaactg 18289317  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
     |||||||||||||||| |||||||| |||||||| ||| ||||| |||| ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  18289318 gagccaaccccaaaggcattataaatgctattcaagttaaggacgataagaagttagaggaccccattatgaaaactaagacaattgagggtgagataga 18289417  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||    
T  18289418 gagtgaaaagcaacaaggtgagaaagtcatagcagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttcct 18289517  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| | ||||||||||| ||||||||| ||||||    
T  18289518 aagcctaacctcatagtgattgagagtttttccaccccttgtgtgattaagagtgaaaccattgagaaagccatgtgtgattttggagagaatgtcaggt 18289617  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18289618 tgatgccattatccctttgggaaggattgggtattgggtagataaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaaccc 18289717  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||||||||||||||||||||    
T  18289718 acgagtttaattgcttttattttgtttgttttgt 18289751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 45241974 - 45241441
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  45241974 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccaagccaaactg 45241875  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  45241874 aagtcaaccccaaaggccttataaatgctattcaacttagggacggtaggcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 45241775  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  45241774 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgct 45241675  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||| | ||||||||||||||||||||| |||| |    
T  45241674 aagcctaacctcatagtgattgagagtttttccatcccttgtgtgattaagagtgaaaccattgagaaagccatgtgtgatttgggagagaatgtcagtt 45241575  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    ||||| | |||||||||||| ||||||||||||| ||||||||||||||  | || ||||||||||||||| |||| ||||||||||||||| |||||||    
T  45241574 tgatgtcgctatccctttgggaaagattgggtatagggtagagaaacctcttgattgtcaagctaatgactttaaatgagcgcttcgtgggaggcaaccc 45241475  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    |  ||||| |||| ||||||||||||||||||||    
T  45241474 acaagtttaattgtttttattttgtttgttttgt 45241441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 382; E-Value: 0
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 14688872 - 14688339
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  14688872 attgctactcacactagaatgctagaaactcaaatctttcaagtagcccaacaagtagctacttcctctcaaacccccgaagtctttccaagccaaactg 14688773  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  14688772 aagccaaccccaaaggccttataaatgctattcaacttagggaaggtaggcagttagaggaccccattatgaaaactaagacaatcgagggtgagataga 14688673  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||| ||||| ||||||| |||||||| || |||||||||| ||||||||||||||| |    
T  14688672 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataaaccaatcgtttcacaaccttataaacacaaaatccatctcccacaaaggcttgtt 14688573  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  | ||| ||||||||||||| |||||||||||||||||| |||||||||||||||| |||   ||||||||||||||||||||| |||| |    
T  14688572 aagcctaacctaatattgattgagagtttttccaccccttgtgtgattaagagtgaaaccattgagaaagtcatgtgtgatttgggagagaatgtcagtt 14688473  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||    
T  14688472 tgatgccactatccctttgggaaagattgggtattgggtagagaaaccttccaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggaaaccc 14688373  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | |||||| |||||||| ||||||||||||||||    
T  14688372 acgagtttaattgctttaattttgtttgttttgt 14688339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 362 - 530
Target Start/End: Original strand, 10619685 - 10619853
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||||||||||||||||||  |||||||| | |  ||||||||||| ||||||||||||| ||||||||||||||  | |    
T  10619685 gaaagcattgagaaagccatgtgtgatttgggagagaatgccaggttgacgtcgttatccctttgggaaagattgggtatcgggtagagaaacctcttga 10619784  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatttt 530  Q
    | ||||||||||||||| |||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  10619785 ttgtcaagctaatgactttaaacgagcgcttcgtgggaggcaacccacgagtttaattgcttttatttt 10619853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 362 - 530
Target Start/End: Original strand, 10824706 - 10824874
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||||||||||||||||||  |||||||| | |  ||||||||||| ||||||||||||| ||||||||||||||  | |    
T  10824706 gaaagcattgagaaagccatgtgtgatttgggagagaatgccaggttgacgtcgttatccctttgggaaagattgggtatcgggtagagaaacctcttga 10824805  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatttt 530  Q
    | ||||||||||||||| |||| ||||||||||||||| |||||||| |||||| ||||||||||||||    
T  10824806 ttgtcaagctaatgactttaaacgagcgcttcgtgggaggcaacccacgagtttaattgcttttatttt 10824874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 3373686 - 3373814
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  |||||||||||||  | |||||||||| | | | ||||||||||||||||     
T  3373686 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgcgaaagattgggtataagatagagaaaccctttgaccgtcaagctaatgactt 3373785  T
Q  480 taaaagagcgcttcgtgggatgcaaccca 508  Q
    |||| ||||||||||||||| ||||||||    
T  3373786 taaacgagcgcttcgtgggaggcaaccca 3373814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 3351733 - 3351862
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||||||| | |||||| |||| ||||| ||| | ||||||||  ||||||||||||| || ||| |||||||| |||| ||||||||||||||||    
T  3351733 atgtgtgatttgtgggagaatgtcagtttgataccattgtccctttgtgaaagattgggtataggatagggaaacctttctaaccgtcaagctaatgact 3351832  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  3351833 ataaaggagcgcttcgtgggaggcaaccca 3351862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 21100516 - 21100387
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||| ||||| || |||  ||||||| || |  |||||||||||||||    
T  21100516 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagatttggtataggataggaaaacctttcttaatgtcaagctaatgact 21100417  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  21100416 ataaaggagcgcttcgtgggaggcaaccca 21100387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 32 - 271
Target Start/End: Original strand, 10824319 - 10824558
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| || |||   |||||||| |||||||| || ||||||||||||||| |||||    
T  10824319 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccaccgggatctttccaggtcaaactaaaaccaaccccaaaggccatataa 10824418  T
Q  132 attctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaa 231  Q
     |||||||   |||||||| ||||| || ||||||||| |  || |||||| ||| |  | |||||| ||||||| ||||||  |||  |||  ||||||    
T  10824419 gttctattactcttagggatggtaaccaattagaggaccccgttgtgaaaattaaaaacaatgagggagagatagggagtgatgagcctcaaagtgagaa 10824518  T
Q  232 ggtcataggagagagtgataagccaatagtttcaccacct 271  Q
        |||||||||| ||| |||||| | ||||||||||||    
T  10824519 aactataggagagaatgaaaagccatttgtttcaccacct 10824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 16640703 - 16640663
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctca 48  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16640703 attgctactcacactagaatgctagaaactcaaatctctca 16640663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 4621 - 4546
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    ||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  4621 gtcaagctaatgactataaataagcgcttcgtgggaggcaacccacgtatttaactgcttttgttttgtttgtttt 4546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 15263186 - 15263115
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||||||||||||    
T  15263186 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttattttgttt 15263115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 15960994 - 15960923
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||||||||||||    
T  15960994 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttattttgttt 15960923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 11919405 - 11919353
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||| | |||||||||||||| |||| ||||||||||||||| ||||||||    
T  11919405 ttctaaccatcaagctaatgactttaaacgagcgcttcgtgggaggcaaccca 11919353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 10619872 - 10619905
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||| ||||||||||||||||||||||||||||||    
T  10619872 ttttttttgtaggtatttgtccaaatatgatgcg 10619905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 10824893 - 10824926
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||| ||||||||||||||||||||||||||||||    
T  10824893 ttttttttgtaggtatttgtccaaatatgatgcg 10824926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 11920405 - 11920292
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    ||||||||||| |||| |||||| |||| ||| ||||| ||||| |||||| | || ||| || |||||||| | || | |||||||||  ||||||| |    
T  11920405 attgctactcatactaaaatgcttgaaaatcatatctcccaagtggcccaacaggtggctgctccctctcaaacaccgggagtctttcctggtcaaaccg 11920306  T
Q  108 aagccaaccccaaa 121  Q
    | ||||| ||||||    
T  11920305 aggccaaacccaaa 11920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 16679504 - 16679549
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  16679504 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 16679549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 22108091 - 22108136
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  22108091 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 22108136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Original strand, 10649212 - 10649256
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  10649212 gtcaagctagtgacgataaaagagcgcttcgtgggaggcaaccca 10649256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 421; Significance: 0; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 8 - 536
Target Start/End: Original strand, 15698 - 16226
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15698 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaagtcaaactg 15797  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  15798 aagccaaccccaaaggccttataaatgccattcaacttagggacggtaagcagttggaggaccccattatgaaaactaagacaattgagggtgagataga 15897  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| ||||||||||||||||| |||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  15898 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgaaaagccaatagattcaccacattataaactcaaaatccatgtcccacaaaggcttgct 15997  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||||||| ||||||    
T  15998 aagcctaacatcatagtgatttagagtttttccaccccttgtgtgattaagagtgaaaccattgagaaagcaatgtgtgatttgggagagaatgtcaggt 16097  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  16098 tgatgccactatccctttgggaaagattggatattgggtagagaaaccttctaatcgtcaagctaatgactctaaacgagcgcttcttgggaggcaaccc 16197  T
Q  508 atgagttttattgcttttattttgtttgt 536  Q
    ||||||||||||||||||| |||||||||    
T  16198 atgagttttattgcttttactttgtttgt 16226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 508
Target Start/End: Original strand, 131062 - 131191
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||||||||| || |||  ||  ||||||||| |||||||| |  ||||||||||||| || |||  ||||||| || |  |||||||||||||||    
T  131062 atgtgtgatttgggggaaaatgccaatttgatgccattatcccttcgtgaaagattgggtataggataggaaaacctttcttaatgtcaagctaatgact 131161  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  131162 ataaaggagcgcttcgtgggaggcaaccca 131191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 16242 - 16275
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||| ||||||||||||||||    
T  16242 tttgttttgtaggtattcgtccaaatatgatgcg 16275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 407; Significance: 0; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 12 - 541
Target Start/End: Complemental strand, 21789695 - 21789168
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  21789695 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaacaagtagctacttcatctcaaacccccgaagtctttccaagtcaaactgaagc 21789596  T
Q  112 caaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagt 211  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||  |    
T  21789595 caaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagatagag--t 21789498  T
Q  212 gaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagc 311  Q
     |||||||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  21789497 caaaagcaacaaggtgaggaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgttaagc 21789398  T
Q  312 ctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgat 411  Q
    ||||  || |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||| | ||||||||||||||||||||| |||| |||||    
T  21789397 ctaacctcgtagtgattgagagtttttccaccccttgtgtgattcagagtgaaaccattgagaaagccatgtgtgatttgggagagaatgtcagtttgat 21789298  T
Q  412 gccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatga 511  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||    
T  21789297 gccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaatctaatgactctaaaagagcgcttcgtgggaggcaacccacga 21789198  T
Q  512 gttttattgcttttattttgtttgttttgt 541  Q
    |||| |||||||||||||||||||||||||    
T  21789197 gtttaattgcttttattttgtttgttttgt 21789168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 404; E-Value: 0
Query Start/End: Original strand, 8 - 530
Target Start/End: Original strand, 27044006 - 27044531
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  27044006 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaacccccgaagtctttccaggtcaaactg 27044105  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  27044106 aagccaaccccaaagaccttataaatgttattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgagggtgagataga 27044205  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||| ||||||| |||| | |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |    
T  27044206 gagtgaaaaacaacaaggtgaggaagtcataggagagagtgataagccaatcgtttcaccaccttataaactcaaaatccatgtcccacaaaggcttgtt 27044305  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtga---ttgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctca 404  Q
    ||||||||  ||||||||||||||||||| |||||||||||| |||   ||||||||||||||||||||||| |||||||| |||||||||||||||| |    
T  27044306 aagcctaacctcatagtgattgagagtttttccaccccttgtatgattgttgagagtgaaaccattgaaaaagctatgtgtaatttgggagagaatctta 27044405  T
Q  405 ggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27044406 ggttgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaa 27044505  T
Q  505 cccatgagttttattgcttttatttt 530  Q
    |||| | |||| ||||||||| ||||    
T  27044506 cccacgggtttaattgcttttttttt 27044531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 380 - 539
Target Start/End: Complemental strand, 22627797 - 22627637
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    ||||||||||||||||| | | |||| ||||||||| ||||||||||  ||||||||||||| | ||||||||||||| | || |||||||||||||||     
T  22627797 atgtgtgatttgggagatagtgtcagtttgatgccattatccctttgtgaaagattgggtatagagtagagaaaccttttgattgtcaagctaatgactt 22627698  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagtttt-attgcttttattttgtttgtttt 539  Q
    |||| |||||||| |||||| |||||||| | ||||| |||||||||||||||||||||||    
T  22627697 taaacgagcgcttagtgggaggcaacccacgcgttttaattgcttttattttgtttgtttt 22627637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 3987063 - 3987220
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| ||||||||||  ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  3987063 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttgtgaaagattgggtataggatagagaaaccct-tgaccgtcaagctaatgactt 3987161  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  3987162 taaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 3987220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 539
Target Start/End: Original strand, 8650126 - 8650209
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| || ||||||||||||| |||| ||||||||||||||| |||||||| |  ||| | | ||||| |||||||||||||    
T  8650126 ttctaaccgccaagctaatgactataaaggagcgcttcgtgggaggcaacccacgcatttaactacttttgttttgtttgtttt 8650209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 465 - 539
Target Start/End: Complemental strand, 8950558 - 8950484
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||| |||| ||||||||||||||| |||| ||| |  ||| | ||||||| |||||||||||||    
T  8950558 tcaagctaatgactataaaggagcgcttcgtgggaggcaaaccacgtatttaactgcttttgttttgtttgtttt 8950484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 22466102 - 22466026
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||| ||||  |||||||||| ||| |||||||| |  ||| | ||||||| |||||||||||||    
T  22466102 cgtcaagctaatgactataaagaagcgcttcgtaggaggcaacccacgcatttaactgctttttttttgtttgtttt 22466026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19772918 - 19772835
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19772918 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19772835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19773763 - 19773680
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19773763 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19773680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19774608 - 19774525
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19774608 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19774525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19775453 - 19775370
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19775453 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19775370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19776298 - 19776215
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19776298 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19776215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 539
Target Start/End: Complemental strand, 19777143 - 19777060
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||| ||||||| ||||||||||||||||| | ||||||||  ||||||||    ||| | ||||||| |||||||||||||    
T  19777143 ttctaaccgtcaagataatgactctaaaagagtgattcgtgggtggcaacccacccatttaactgcttttgttttgtttgtttt 19777060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 17096017 - 17095971
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  17096017 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 17095971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 16398996 - 16398943
Alignment:
Q  10 tgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagt 63  Q
    |||||||||||  | |||| |||||||||||||||||||||||| |||| ||||    
T  16398996 tgctactcacaacaaaatgttagaaactcaaatctctcaagtagtccaacaagt 16398943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 19782123 - 19782168
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  19782123 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 19782168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 21801797 - 21801752
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  21801797 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 21801752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 22844844 - 22844889
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  22844844 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 22844889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 371; Significance: 0; HSPs: 4)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 8 - 525
Target Start/End: Complemental strand, 105070 - 104552
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| |||||    
T  105070 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaaaccctcgaagtctttccaggtctaactg 104971  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||| || |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||    
T  104970 aagccaaccccaaaagcgttataaatgctattcaacttagggacggtaagcagttcgaggacaccattatgaaaactaagacaatttagggtgagataga 104871  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||    
T  104870 gagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatcgtttcaccaccttataaacttaaaatccatgtcccacaaaggcttgct 104771  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  104770 aagcctaacttcatagtgattgagagtttttccaccccttgtgtgattgagagtgaaaccattgataaagctatgtgtgatttgggagagaatctcaggt 104671  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacc 506  Q
    |||||||||||||||||||  ||||||||||||| || |||  ||||| |||| |  ||||||||||||||| |||| ||||||||||||||| ||||||    
T  104670 tgatgccactatccctttgtgaaagattgggtataggataggaaaacctttcttaatgtcaagctaatgactataaaggagcgcttcgtgggaggcaacc 104571  T
Q  507 catgagttttattgctttt 525  Q
    || |  ||| |||||||||    
T  104570 cacgcatttaattgctttt 104552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 362 - 539
Target Start/End: Complemental strand, 53257 - 53080
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | ||||||||||||||||||||| ||||||||| |||  ||||||||| | ||||||||||||| ||||||||||||||  | |    
T  53257 gaaagcattgagaaagccatgtgtgatttgggagagaatgtcaggttgacgccgttatcccttttggaaagattgggtatagggtagagaaacctcttga 53158  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | ||||||||||||||| |||| ||||| ||| ||||| |||||||| | |||| |||||||||||||||||||||||    
T  53157 ttgtcaagctaatgactttaaacgagcgtttcttgggaggcaacccacgggtttaattgcttttattttgtttgtttt 53080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 218
Target Start/End: Complemental strand, 33108 - 32915
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggc 124  Q
    ||||||||| |||||||||||||||||||||||| |||||||  |||||||  || || ||| |||||||||  | ||| ||||||| ||||| | ||||    
T  33108 aatgctagagactcaaatctctcaagtagcccaacaagtagcctcttcctcagaaacctccggagtctttccgggccaacctgaagctaacccaagaggc 33009  T
Q  125 cttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagc 218  Q
    |  || |||||||||  ||||||  | |||| ||| ||||||||| | ||| ||||||| |||| || ||||| |||| |||||||||||||||    
T  33008 caaatgaattctattacacttagaaatggtaggcaattagaggacgccattgtgaaaaccaagataaatgaggttgaggtagagagtgaaaagc 32915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 206
Target Start/End: Complemental strand, 53644 - 53470
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| || |||   |||| ||| |||||| |||| ||||||||||||||| |||||    
T  53644 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccaccgggatcttcccaggtcaaattgaaaccaaccccaaaggccatataa 53545  T
Q  132 attctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatag 206  Q
     |||||||   |||||||| ||| | || ||| ||||| | ||| |||||| |||||  | |||||| |||||||    
T  53544 gttctattactcttagggatggttaccaattaaaggaccccattgtgaaaattaagaacaatgagggagagatag 53470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 160 - 541
Target Start/End: Complemental strand, 14463 - 14082
Alignment:
Q  160 gttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaata 259  Q
    |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||     
T  14463 gttacaggaccccattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaaggtgagaaagtcataggagagagtgataagccaatc 14364  T
Q  260 gtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgaga 359  Q
     ||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||| |||||||||||||||||| |||    
T  14363 atttcaccaccttataaactaaaaatccatgtcccataaaggctttctaagcctaacctcatagtgattgagagtttttccaccccttgtgtgattaaga 14264  T
Q  360 gtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttct 459  Q
    ||||||||||||| ||| | ||||||||||||||| ||||| |||| ||||||||| ||||||||||  ||||||||||||| ||||||||||||||  |    
T  14263 gtgaaaccattgagaaagccatgtgtgatttgggaaagaatgtcagtttgatgccattatccctttgtgaaagattgggtatagggtagagaaacctctt 14164  T
Q  460 aatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
     || ||||||||||||||| |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  14163 gattgtcaagctaatgactttaaatgagcgcttcgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 14082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 262 - 541
Target Start/End: Original strand, 17232 - 17511
Alignment:
Q  262 ttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagt 361  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||    
T  17232 ttcaccaccttataaactcaaaatccatgtcccacaaaggcttgctaagcctaacctcatagtgattgagagtttttccaccccttgtgtgattgagagt 17331  T
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||  ||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17332 gaaatcattgggaaacccacgtgtgatttgggagagaatctcaggttgatgccactatccctttgggaaagattgggtattgggtagagaaaccttctaa 17431  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| |||| |||||||||||||| |||||    
T  17432 tcgtcaagctaaagactctaaaagagcgcttcgtgggaggcaacccacgagtttaattgtttttattttgtttggtttgt 17511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 17522 - 17555
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  17522 tttgttttgtaggtatttgtccaaatatgatgcg 17555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 206; Significance: 1e-112; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 209 - 542
Target Start/End: Complemental strand, 10223 - 9890
Alignment:
Q  209 agtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgcta 308  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  10223 agtgataagcaacaaggtgagaaagtcataggagaaagtgataagccaatcgtttcaccacctcataaactcaaaatccatgtcccacaaaggcttgata 10124  T
Q  309 agcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggtt 408  Q
    |||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| | |||||  |||||||||||||| |||||||    
T  10123 agcctaacctcatagtgattgagagtttttccaccctttgtgtgattgagagtgaaaccattgagaaagccatgtgccatttgggagagaatgtcaggtt 10024  T
Q  409 gatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||   | || || |||||||||||| |||| ||||||||||||||| ||||||||    
T  10023 gatgccactatccctttgggaaagattgggtatagggtagaaaaaccacttgattgttaagctaatgactttaaacgagcgcttcgtgggaggcaaccca 9924  T
Q  509 tgagttttattgcttttattttgtttgttttgta 542  Q
     |||||| ||||||||||||||||||||||||||    
T  9923 cgagtttaattgcttttattttgtttgttttgta 9890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 209 - 542
Target Start/End: Complemental strand, 14326 - 13993
Alignment:
Q  209 agtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgcta 308  Q
    ||||| |||||||||| |||||| ||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||    
T  14326 agtgataagcaacaaggtgagaaagtcataggagaaagtgataagccaatcgtttcaccacctcataaactcaaaatccatgtcccacaaaggcttgata 14227  T
Q  309 agcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggtt 408  Q
    |||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| | |||||  |||||||||||||| |||||||    
T  14226 agcctaacctcatagtgattgagagtttttccaccctttgtgtgattgagagtgaaaccattgagaaagccatgtgccatttgggagagaatgtcaggtt 14127  T
Q  409 gatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||||||| ||||||||||||| ||||||| |||||   | || || |||||||||||| |||| ||||||||||||||| ||||||||    
T  14126 gatgccactatccctttgggaaagattgggtatagggtagaaaaaccacttgattgttaagctaatgactttaaacgagcgcttcgtgggaggcaaccca 14027  T
Q  509 tgagttttattgcttttattttgtttgttttgta 542  Q
     |||||| ||||||||||||||||||||||||||    
T  14026 cgagtttaattgcttttattttgtttgttttgta 13993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 13 - 254
Target Start/End: Complemental strand, 10455 - 10214
Alignment:
Q  13 tactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagcc 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  10455 tactcacactagaatgctagaaactcaaatctctcaagtagcccaataagtagctacttcctctcaaacccctgaagtctttccaagtcaaactgaagcc 10356  T
Q  113 aaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtg 212  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||    
T  10355 aaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccattatgaaaactaagacaattgaggttgagatagagagtg 10256  T
Q  213 aaaagcaacaagctgagaaggtcataggagagagtgataagc 254  Q
    |||||||||||| |||||| ||||||||||| ||||||||||    
T  10255 aaaagcaacaaggtgagaaagtcataggagaaagtgataagc 10214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 8 - 254
Target Start/End: Complemental strand, 14563 - 14317
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  14563 attgatactcacactagaatgctagaaactcaaatctctcaagtagcccaacaagtagctacatcctctcaaacccctgaagtctttccaagtcaaactg 14464  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||| |||||||||    
T  14463 aagccaaccccaaaggccttataaatgctattcaacttagggacggtaagcagttagaggaccccataatgaaaactaagacaattgaggatgagataga 14364  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagc 254  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  14363 gagtgaaaagcaacaaggtgagaaagtcataggagaaagtgataagc 14317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1184 (Bit Score: 166; Significance: 2e-88; HSPs: 1)
Name: scaffold1184
Description:

Target: scaffold1184; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 8 - 541
Target Start/End: Complemental strand, 1714 - 1181
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactg 107  Q
    |||||||||||||  | |||| |||| |||||||||||||||||||||||| |||| ||||| ||||||||| ||| |||  ||||| |  | ||||||     
T  1714 attgctactcacaacaaaatgttagagactcaaatctctcaagtagcccaacaagtggctacctcctctcaaaccctcgatatcttttcgggccaaactt 1615  T
Q  108 aagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagataga 207  Q
    |||||||||| ||||||||||||||| | |||  ||||||||| |||||||| ||||||||| |  || |||||||||||||||||||||||||||||||    
T  1614 aagccaaccctaaaggccttataaatgcaattacacttagggatggtaagcaattagaggactccgttgtgaaaactaagacaattgagggtgagataga 1515  T
Q  208 gagtgaaaagcaacaagctgagaaggtcataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgct 307  Q
     || ||||| | ||||  ||||||   |||||||||||||||||||||||| |||||||||||| ||| |  |||||| | | |||||||||||||||||    
T  1514 aagcgaaaaaccacaaagtgagaaatccataggagagagtgataagccaattgtttcaccacctcataaatccaaaattcctttcccacaaaggcttgct 1415  T
Q  308 aagcctaaattcatagtgattgagagtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggt 407  Q
    ||||||||  ||| ||     |  ||||| |||| |||||||||||||| ||||||||||||||| ||| | | ||||||| | || |  | | |||| |    
T  1414 aagcctaacctcagaggttccggtagtttttccatcccttgtgtgattgtgagtgaaaccattgagaaagccaggtgtgatataggggctagtgtcagtt 1315  T
Q  408 tgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccc 507  Q
    |||||||  | |||||| |  |||| |||||||| ||||||||||||||||||| | | || ||||| ||| ||||  |||||||||  |||   |||||    
T  1314 tgatgcctttgtcccttcgtgaaaggttgggtatagggtagagaaaccttctaaccattaacctaataactttaaacaagcgcttcgcaggagttaaccc 1215  T
Q  508 atgagttttattgcttttattttgtttgttttgt 541  Q
    | ||||||||||||||||||||||||||||||||    
T  1214 acgagttttattgcttttattttgtttgttttgt 1181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566 (Bit Score: 162; Significance: 4e-86; HSPs: 2)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 340 - 541
Target Start/End: Original strand, 92 - 293
Alignment:
Q  340 caccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggt 439  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  92 caccccttgtatgattgagagtgaaaccattgagaaagctatgtgtgatttgggagagaatcttaggttgatgccactatccctttaggaaagattgggt 191  T
Q  440 attgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||    
T  192 attgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggaggcaacccacgagtttaattgtttttattttgtttgtttt 291  T
Q  540 gt 541  Q
    ||    
T  292 gt 293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0566; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 535 - 565
Target Start/End: Original strand, 307 - 337
Alignment:
Q  535 gttttgtaggtatttgtccaaatatgatgcg 565  Q
    |||||||||||||||||||||||||||||||    
T  307 gttttgtaggtatttgtccaaatatgatgcg 337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 135; Significance: 5e-70; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 35 - 541
Target Start/End: Complemental strand, 10057 - 9554
Alignment:
Q  35 actcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaatt 134  Q
    |||||||||||||||||||||||| |||| ||||| |||||| || ||||  || |||||||  | ||||||||||| |  |||||||||||| |||||     
T  10057 actcaaatctctcaagtagcccaacaagtggctacctcctcttaaacccctaaaatctttccgggccaaactgaagctattcccaaaggccttgtaaatg 9958  T
Q  135 ctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaagctgagaaggt 234  Q
    | |||  |||| |||| || ||||||||||||||  |  || |||||||||| ||||||||||||||||||||||| ||||| | ||||  |||||| |     
T  9957 caattacacttggggatgg-aagcagttagaggatcccgttgtgaaaactaacacaattgagggtgagatagagagcgaaaaaccacaaagtgagaaagc 9859  T
Q  235 cataggagagagtgataagccaatagtttcaccaccttatagactcaaaatccatgtcccacaaaggcttgctaagcctaaattcatagtgattgagagt 334  Q
    |||||||||||||||||| ||||| |||||| ||||| ||| || |||||| | | |||||||||||| |||||||||| |  |||  |     || |||    
T  9858 cataggagagagtgataatccaattgtttcaacacctcataaacccaaaattcctttcccacaaaggcatgctaagcctgacctcagtggtcccgatagt 9759  T
Q  335 ttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagat 434  Q
    || |||| |||||||||||||||||||||||||||||| ||  | ||||||||||| || |  | | |||| ||||||||  | | ||||||  |||| |    
T  9758 ttttccatcccttgtgtgattgagagtgaaaccattgagaacgccatgtgtgatttaggcgctagtgtcagtttgatgcctttgt-cctttgtgaaaggt 9660  T
Q  435 tgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||  |||||||||| ||||||| |||||||||| | | |   |||||||||||||||||| |||||||| |||||||| || |||||||||||||    
T  9659 tgggtataaggtagagaaatcttctaaccgtcaagctagt-aatgataaagagcgcttcgtgggaggcaacccacgagttttactgattttattttgttt 9561  T
Q  535 gttttgt 541  Q
    |||||||    
T  9560 gttttgt 9554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 4848 - 4603
Alignment:
Q  13 tactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagcc 112  Q
    |||||||| || |||||| || |||||||||||||||||||||||| ||||||||||||||||| || |||||| ||||||||| ||||||||||||  |    
T  4848 tactcacattaaaatgcttgagactcaaatctctcaagtagcccaacaagtagctacttcctctaaaacccccgtagtctttcctagtcaaactgaaatc 4749  T
Q  113 aaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtg 212  Q
    |||||||||||   ||||||| |||||  || |||||| |||||  | |||||| || |  || ||||| | |||| |||| ||||||||||||||||||    
T  4748 aaccccaaaggttgtataaatgctattacacatagggatggtaaaaaattagagaaccccgttgtgaaatccaagataattaagggtgagatagagagtg 4649  T
Q  213 aaaagcaacaagctgagaaggtcataggagagagtgataagccaat 258  Q
    |||||||||||| |||||| | ||||||||| ||||| ||||||||    
T  4648 aaaagcaacaaggtgagaaagccataggagaaagtgacaagccaat 4603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 2e-38; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 362 - 539
Target Start/End: Original strand, 26921517 - 26921694
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||||||||| |||||||||||||   | |    
T  26921517 gaaagcattgagaaagccatgtgtgatttgggagagaatgacaggttgacgccgttatccctttgggaaagattgggtatagggtagagaaaccccttga 26921616  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    | |||||| |||||||| |||| ||||||||||||||| | |||||| | |||| |||||||||||||||||||||||    
T  26921617 ttgtcaagttaatgactttaaacgagcgcttcgtgggaggaaacccacgggtttaattgcttttattttgtttgtttt 26921694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 367 - 534
Target Start/End: Original strand, 25354539 - 25354706
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||  | | ||||    
T  25354539 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccactatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtc 25354638  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  25354639 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 25354706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 362 - 508
Target Start/End: Complemental strand, 14765 - 14619
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||| ||||||||||||||  |||||||| |||  ||||||||||| ||||||||||||| ||||||||||||||  | |    
T  14765 gaaagcattgagaaagccatgtgtaatttgggagagaatgccaggttgacgccgttatccctttgggaaagattgggtatcgggtagagaaacctcttga 14666  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    | ||||||||||||||| |||| ||||||||||||||| ||||||||    
T  14665 ttgtcaagctaatgactttaaacgagcgcttcgtgggaggcaaccca 14619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 24823230 - 24823101
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||||||||| || ||| |||||| |||||| ||||||||||||||||    
T  24823230 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagggaaacctttctaaccgtcaagctaatgact 24823131  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  24823130 ataaaggagcgcttcgtgggaggcaaccca 24823101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 25360831 - 25360988
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||||||||||  |||||| | |||  ||||||||||| ||||||||||||| ||||||| ||||||  | || || ||||||||||||     
T  25360831 atgtgtgatttgggagagaatgccaggttaacgccgttatccctttgggaaagattgggtatagggtagaaaaacctcttgattgt-aagctaatgactt 25360929  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||| ||||| ||||||||   |||| |||| |||||||||||||||||    
T  25360930 taaacgagcgcttcttgggaggcaacccacaggtttaattgattttattttgtttgttt 25360988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 24366662 - 24366484
Alignment:
Q  35 actcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaatt 134  Q
    ||||||||||||||||| |||||  |||| | | ||||||||||| || ||| | |||||||| |||||||||||| ||||||||||| || ||||||||    
T  24366662 actcaaatctctcaagtggcccagcaagtggttgcttcctctcaaaccaccggaatctttccaggtcaaactgaagtcaaccccaaagcccatataaatt 24366563  T
Q  135 ctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtga 213  Q
    |||||   ||| |||  ||||| |||||||||||  |  || ||||||| |  ||||||||| ||||||||||||||||    
T  24366562 ctattactctttggggtggtaaacagttagaggagcccgttgtgaaaaccacaacaattgagagtgagatagagagtga 24366484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 23244464 - 23244380
Alignment:
Q  457 tctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    ||||| |||||||||||||||| |||| |||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||    
T  23244464 tctaaccgtcaagctaatgactttaaacgagcgctttgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 23244380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 35 - 213
Target Start/End: Complemental strand, 24369385 - 24369207
Alignment:
Q  35 actcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaatt 134  Q
    ||||||||||||||||| |||||  |||| | | ||||||||||| |||||| | |||||||| |||||||||||| ||||||||||| || |||||||     
T  24369385 actcaaatctctcaagtggcccagcaagtggttgcttcctctcaaacccccggaatctttccaggtcaaactgaagtcaaccccaaagcccatataaatg 24369286  T
Q  135 ctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtga 213  Q
    |||||   |||||||  ||||| || ||||||||     || ||||||| |  ||||||||| ||||||||||||||||    
T  24369285 ctattactcttaggggtggtaaacaattagaggagctcgttgtgaaaaccacaacaattgagagtgagatagagagtga 24369207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 33 - 206
Target Start/End: Original strand, 25354148 - 25354321
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  25354148 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 25354247  T
Q  133 ttctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatag 206  Q
    |||||||   |||||||| ||||| || ||||||||| |  || |||||| |||||  | |||||| |||||||    
T  25354248 ttctattattcttagggatggtaaccaattagaggaccccgttgtgaaaattaagaacaatgagggagagatag 25354321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 25374047 - 25373971
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||| |  ||| | |||||||||||||||||||||    
T  25374047 cgtcaagctaatgactctaaaggagcgcttcgtgggaggcaacccacgcatttaactgcttttattttgtttgtttt 25373971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 15152 - 15045
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||    
T  15152 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataa 15053  T
Q  132 attctatt 139  Q
     |||||||    
T  15052 gttctatt 15045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 16772770 - 16772846
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |  ||| | ||||||  |||||||||||||    
T  16772770 cgtcaagctaatgacactaaaagagcgcttcgtgggaggcaacccacgcatttaactgctttcgttttgtttgtttt 16772846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 363 - 530
Target Start/End: Complemental strand, 24021343 - 24021175
Alignment:
Q  363 aaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaat 462  Q
    |||||||||||||| | |||||||| || ||||  | | |||| || ||| || | ||||||||  |||| ||  |||| ||||||||||||||| | ||    
T  24021343 aaaccattgaaaaagccatgtgtgacttaggagcaagtttcagtttaatgtcattgtccctttgttaaaggtttagtatagggtagagaaaccttttgat 24021244  T
Q  463 cgtcaagctaatgac-tctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatttt 530  Q
    ||||||||||||||| |  ||||||||||| ||||| | |||||||| |||||| |||| |||| ||||    
T  24021243 cgtcaagctaatgacgttaaaaagagcgctgcgtggaaggcaacccacgagtttaattgtttttctttt 24021175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 169
Target Start/End: Original strand, 25360433 - 25360563
Alignment:
Q  39 aaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaattctat 138  Q
    ||||||||||||| |||||| | ||  || ||||||||||| |  |||   |||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  25360433 aaatctctcaagtggcccaacacgtgactgcttcctctcaaacaaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataagttctat 25360532  T
Q  139 tcaacttagggacggtaagcagttagaggac 169  Q
    |   |||||||| |||||  | |||||||||    
T  25360533 tactcttagggatggtaactaattagaggac 25360563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 25361001 - 25361034
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  25361001 tttgttttgtaggtatttgtccaaatatgatgcg 25361034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 532 - 565
Target Start/End: Original strand, 26921707 - 26921740
Alignment:
Q  532 tttgttttgtaggtatttgtccaaatatgatgcg 565  Q
    ||||||||||||||||||||||||||||||||||    
T  26921707 tttgttttgtaggtatttgtccaaatatgatgcg 26921740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 539
Target Start/End: Original strand, 22291314 - 22291390
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||  |||||||||||||||||||| |||||| | |  ||| | ||||||  |||||||||||||    
T  22291314 cgtcaagctaatgacaataaaagagcgcttcgtgggaggcaacctacgcatttaaatgctttcgttttgtttgtttt 22291390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 22047756 - 22047685
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  22047756 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 22047685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24021803 - 24021748
Alignment:
Q  8 attgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagt 63  Q
    |||||||||||||  | ||||| ||| |||||||||||||||||||||||| ||||    
T  24021803 attgctactcacaacaaaatgcaagagactcaaatctctcaagtagcccaacaagt 24021748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Complemental strand, 25146999 - 25146956
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||| | |||||||||||||||||||| ||||||||    
T  25146999 tcaagctaatgaatataaaagagcgcttcgtgggaggcaaccca 25146956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 26921188 - 26921267
Alignment:
Q  90 tctttccaagtcaaactgaagccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggac 169  Q
    |||| ||| ||||||||||| ||||||||||||||| ||||| |||||||   |||||||| ||||| || ||| |||||    
T  26921188 tcttcccaggtcaaactgaaaccaaccccaaaggccatataagttctattactcttagggatggtaaccaattaaaggac 26921267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 27620691 - 27620762
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  27620691 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 27620762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 25 - 123
Target Start/End: Complemental strand, 21514648 - 21514550
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaagg 123  Q
    ||||||||| |||||||||||| ||||||||||| |||| ||   ||||||  || || ||||| |||||||| | ||| ||||||| ||||| |||||    
T  21514648 aatgctagagactcaaatctcttaagtagcccaacaagtggcctattcctcaaaatcctccgaaatctttccaggccaacctgaagctaacccaaaagg 21514550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 114632 - 114677
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  114632 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 506
Target Start/End: Original strand, 15531711 - 15531756
Alignment:
Q  461 atcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacc 506  Q
    |||||||||||||||||  |||||||||||| ||||||| ||||||    
T  15531711 atcgtcaagctaatgacattaaaagagcgctgcgtgggaggcaacc 15531756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 22868838 - 22868883
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  22868838 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 22868883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 24798433 - 24798388
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  |||| ||||||||||||||| ||||||||    
T  24798433 cgtcaagctaatgacaataaacgagcgcttcgtgggaggcaaccca 24798388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 25591253 - 25591176
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtca 102  Q
    |||||| || |||||||||||||||||||||||| |||| ||  ||||||| ||| | || ||| ||||||| |||||    
T  25591253 aatgcttgagactcaaatctctcaagtagcccaacaagtggcctcttcctcacaaactcctgaaatctttccgagtca 25591176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 27624721 - 27624766
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  27624721 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 27624766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 24173563 - 24173451
Alignment:
Q  10 tgctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaa 109  Q
    |||||| ||||||| |||||| || || |||||||| |||||  ||||| |||| || || || |||||| | || | |||||||||  ||||||| |||    
T  24173563 tgctacccacactaaaatgcttgagacccaaatctcccaagtgacccaacaagtggccacctcttctcaaacaccgggagtctttcctggtcaaaccgaa 24173464  T
Q  110 gccaaccccaaag 122  Q
     ||||||||||||    
T  24173463 accaaccccaaag 24173451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 388
Target Start/End: Original strand, 29954218 - 29954274
Alignment:
Q  332 agtttctccaccccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgat 388  Q
    ||||| |||| ||| ||||||||||| | |||||||||||| ||||| |||||||||    
T  29954218 agtttttccatcccatgtgtgattgaaaatgaaaccattgagaaaaccatgtgtgat 29954274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 79; Significance: 1e-36; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 875 - 711
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc---ttctaatcgtcaagctaatga 476  Q
    ||||||||||||||||||||| | || ||||||| | | |||||||   ||||||||||||| || |||| |||||   |||||| ||||||||||||||    
T  875 atgtgtgatttgggagagaatgttagtttgatgctattgtccctttctgaaagattgggtataggatagataaaccactttctaaccgtcaagctaatga 776  T
Q  477 ctctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  775 ctctaaacgagcacttcgtgggagacaacccatgagttttattggttttattttgtttgttttgt 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 223
Target Start/End: Complemental strand, 1166 - 1085
Alignment:
Q  142 acttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagtgaaaagcaacaa 223  Q
    ||||||||| |||||||| ||||||||| |  || || |||| |||| |||||||| |||| ||||||||||||||| ||||    
T  1166 acttagggatggtaagcaattagaggaccccgttgtggaaaccaagagaattgaggttgaggtagagagtgaaaagccacaa 1085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 10132 - 9968
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc---ttctaatcgtcaagctaatga 476  Q
    ||||||||||||||||||||| | || |||||| || | |||||||   ||||||||||||| || || | |||||   |||||| ||||||| ||||||    
T  10132 atgtgtgatttgggagagaatgttagtttgatgtcattgtccctttttgaaagattgggtataggataaataaaccactttctaaccgtcaagataatga 10033  T
Q  477 ctctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    ||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  10032 ctctatacgagcgcttcgtgggaggcaacccatgagttttattgcttttattttgtttgttttgt 9968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 12 - 216
Target Start/End: Original strand, 278 - 482
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    ||||||||| || |||| |||| |||||||||||||||||||||||| |||| ||||||| ||||||| ||  |  ||| |||||| ||| || |||| |    
T  278 ctactcacaataaaatgttagagactcaaatctctcaagtagcccaacaagtggctactttctctcaaaccttccgagtatttccaggtctaattgaaac 377  T
Q  112 caaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatagagagt 211  Q
    |||||||||||||| ||||||| |||||  ||||||||  |||||| ||||||||||| | ||| | ||| | ||||| ||||||||||||||||||||     
T  378 caaccccaaaggccatataaatgctattacacttagggttggtaagtagttagaggaccccattgtaaaatccaagactattgagggtgagatagagagc 477  T
Q  212 gaaaa 216  Q
    |||||    
T  478 gaaaa 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0560 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 380 - 539
Target Start/End: Original strand, 3868 - 4028
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||||| ||||||||  ||||||||||||| || ||| |||||| |||||| |||||||||||||||     
T  3868 atgtgtgatttgggggagaatgtcagtttgatgccactgtccctttgtgaaagattgggtataggatagggaaacctttctaaccgtcaagctaatgaca 3967  T
Q  479 ctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
     |||| ||||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  3968 ataaaggagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtttgtttt 4028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 389 - 477
Alignment:
Q  110 gccaaccccaaaggccttataaattctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgaggg 198  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  389 gccaaccccaaaggccttataaatgttattcaacttagggacggtaagcagtttgaggacaccattatgaaaactaagacaattgaggg 477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 71; Significance: 8e-32; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 380 - 538
Target Start/End: Complemental strand, 1211 - 1053
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||||||||| || |||||||||| | | ||||||||||||||||||     
T  1211 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagagaaaccctttgatcgtcaagctaatgactt 1112  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| |||||||| |  ||| ||||||||  |||| |||||||    
T  1111 taaacgagcgcttcgtgggaggcaacccacgcatttaattgctttagttttatttgttt 1053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 71; Significance: 8e-32; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 380 - 541
Target Start/End: Complemental strand, 12241 - 12077
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc---ttctaatcgtcaagctaatga 476  Q
    ||||||||||||| |||| || |||| |||||| || | |||||||   ||||||||||||| || || | ||| |   |||||| |||||| |||||||    
T  12241 atgtgtgatttggaagagcatgtcagtttgatgtcattgtccctttctgaaagattgggtataggataaacaaatcactttctaaccgtcaaactaatga 12142  T
Q  477 ctctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  12141 ctctaaacgagcgcttcgtgggaggcaacccatgagttttattgctcttattttgtttgttttgt 12077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 12651 - 12553
Alignment:
Q  27 tgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggcc 125  Q
    |||||||||||||||||||||||||||||||| |||  | | |||||||||   ||  || | |||||||| ||||||||||| |||||||||||||||    
T  12651 tgctagaaactcaaatctctcaagtagcccaacaagcggttgcttcctctcctaccatcggaatctttccatgtcaaactgaaaccaaccccaaaggcc 12553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 541
Target Start/End: Complemental strand, 35284 - 35109
Alignment:
Q  367 cattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtc 466  Q
    |||||| ||| | |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||||||||| ||||||||||||||  | | |||     
T  35284 cattgagaaagccatgtgtgatttgggagagaatgccaggttgacgcctttatccctttgggaaagattgggtatagggtagagaaacctcttgaacgtt 35185  T
Q  467 aagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt-tgttttgt 541  Q
    |||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||| ||||||||    
T  35184 aagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttgtgttttgt 35109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 4470 - 4541
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  4470 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 4541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 10473 - 10631
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| |||||||||   ||||||||||||| || |||||||||| | | | ||||||||||||||||     
T  10473 atgtgtgatttgggggagaatgtcagtttgatgccattatccctttttgaaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactt 10572  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||||||||||||||| | |||||| |  ||| ||||||||| |||| |||||||    
T  10573 taaacgagcgcttcgtgggaggtaacccacgcatttaattgcttttgttttatttgttt 10631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 15586 - 15457
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||||||||| || ||| |||||| |||||| ||||||||||||||||    
T  15586 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagggaaacctttctaaccgtcaagctaatgact 15487  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  15486 ataaaggagcgcttcgtgggaggcaaccca 15457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 63; Significance: 5e-27; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 362 - 508
Target Start/End: Original strand, 39403 - 39549
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||| ||||||||||||||  |||||||| |||  ||||||||||| |||||||||||||  |||||||||||||  | |    
T  39403 gaaagcattgagaaagccatgtgtaatttgggagagaatgccaggttgacgccgttatccctttgggaaagattgggtatcaggtagagaaacctcttga 39502  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    | ||||||||||||||| |||| ||| ||||||||||| ||||||||    
T  39503 ttgtcaagctaatgactttaaacgagtgcttcgtgggaggcaaccca 39549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 429 - 538
Target Start/End: Original strand, 20085 - 20194
Alignment:
Q  429 aaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttatt 528  Q
    ||||||||||||| || |||||||||| | | | |||||||||||||||| |||| ||||||||||||||| |||||||| |  ||| ||||||||| ||    
T  20085 aaagattgggtataggatagagaaaccctttgaccgtcaagctaatgactttaaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgtt 20184  T
Q  529 ttgtttgttt 538  Q
    || |||||||    
T  20185 ttatttgttt 20194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 32 - 156
Target Start/End: Original strand, 39016 - 39140
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  || ||||||| ||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||    
T  39016 gaaacccaaatctctcaagtggcccaacacgtgactgcttcctcacaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataa 39115  T
Q  132 attctattcaacttagggacggtaa 156  Q
     |||||||   |||||||| |||||    
T  39116 gttctattactcttagggatggtaa 39140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 380 - 538
Target Start/End: Original strand, 50229 - 50387
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaatcgtcaagctaatgactc 479  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  ||||||||||||| || |||||||||| | | ||||||||||||||||||     
T  50229 atgtgtgatttgggggagaatgtcagtttgatgccattgtccctttgtgaaagattgggtataggatagagaaaccctttgatcgtcaagctaatgactt 50328  T
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||| ||  ||||||||||| |||||||| |  ||| ||||||||  |||| |||||||    
T  50329 taaacgaaagcttcgtgggaggcaacccacgcatttaattgctttagttttatttgttt 50387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 463 - 541
Target Start/End: Original strand, 12857 - 12935
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||    
T  12857 cgtcaagctaatgactttaaacgagcgcttcgtgggaggcaacccacgagtttaattgcttttattttgtttgttttgt 12935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 11843 - 11952
Alignment:
Q  12 ctactcacactagaatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagc 111  Q
    ||||||| ||||  ||||| |||||| | ||||||||||| |||||| | || | | |||||||||||  | | | | |||||||| ||||||||||| |    
T  11843 ctactcatactaagatgcttgaaacttacatctctcaagtggcccaacaggtggttgcttcctctcaaatctcgggactctttccaggtcaaactgaatc 11942  T
Q  112 caaccccaaa 121  Q
    ||||||||||    
T  11943 caaccccaaa 11952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 33 - 206
Target Start/End: Original strand, 15003 - 15176
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  15003 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 15102  T
Q  133 ttctattcaacttagggacggtaagcagttagaggacactattatgaaaactaagacaattgagggtgagatag 206  Q
    |||||||   |||||||| ||||| || |||||||||   ||| |||||| |||||  | |||||| |||||||    
T  15103 ttctattattcttagggatggtaaccaattagaggaccacattgtgaaaattaagaacaatgagggagagatag 15176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 362 - 533
Target Start/End: Original strand, 15389 - 15559
Alignment:
Q  362 gaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttctaa 461  Q
    |||| |||||| ||| | |||||||||||||||||||||  |||||||| |||  ||||||||||| ||||||| |||||  |||||| || |||  | |    
T  15389 gaaagcattgagaaagccatgtgtgatttgggagagaatgccaggttgacgccgttatccctttgggaaagattaggtataaggtagaaaagcctcttga 15488  T
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    |||||||||||| |||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||    
T  15489 tcgtcaagctaa-gactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtt 15559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 380 - 539
Target Start/End: Original strand, 27715 - 27874
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacc-ttctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| ||||||||| | ||||||||  |||||||||||| | || || |||||| ||||||  |||||||||||||||    
T  27715 atgtgtgatttgggggagaatatcagtttgatgccattgtccctttgtgaaagattgggta-taggaagggaaacctttctaaatgtcaagctaatgact 27813  T
Q  479 ctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
     |||| ||||||||| |||||  ||||||| |  ||| | ||||||| |||||||||||||    
T  27814 ataaaggagcgcttcatgggagacaacccacgcatttaactgcttttgttttgtttgtttt 27874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 464 - 539
Target Start/End: Complemental strand, 37472 - 37397
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    ||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  37472 gtcaagctaatgactataaataagcgcttcgtgggaggcaacccacgtatttaactgcttttgttttgtttgtttt 37397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 464 - 541
Target Start/End: Complemental strand, 12730 - 12653
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttttgt 541  Q
    ||||||||||||||| |||| |||| | |||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  12730 gtcaagctaatgactttaaacgagcacatcgtgggaggcaacccatgattttaattgcttttattttgtttgttttgt 12653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 24150 - 24021
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    ||||||||||||||  ||||| |||| ||||||||| | ||||||||  |||||||||||||  | |||  ||||||| ||||  |||||||||||||||    
T  24150 atgtgtgatttggggtagaatgtcagtttgatgccattgtccctttgtgaaagattgggtatatgataggaaaacctttctaaatgtcaagctaatgact 24051  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  24050 ataaaggagcgcttcgtgggaggcaaccca 24021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 361 - 533
Target Start/End: Original strand, 120433 - 120604
Alignment:
Q  361 tgaaaccattgaaaaaactatgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaaccttcta 460  Q
    ||||| |||||| ||| | |||||||||||||||||||||   ||||||| |||  ||||||||||| ||||||||||||| ||||||| || |||        
T  120433 tgaaagcattgagaaagccatgtgtgatttgggagagaatgctaggttgacgccgttatccctttgggaaagattgggtatagggtagaaaagcctgtcg 120532  T
Q  461 atcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    ||||||||||||| |||| ||||  ||| |||||||||| |||||||| |  ||| | ||||||| |||||||    
T  120533 atcgtcaagctaa-gactataaagaagcacttcgtgggaggcaacccacgcatttaactgcttttgttttgtt 120604  T

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Target: scaffold0029; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 169
Target Start/End: Original strand, 120047 - 120184
Alignment:
Q  32 gaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataa 131  Q
    ||||| |||||||||||||| |||||| | ||  |||||||||||||| || |||   |||||| | ||||||||||| ||||||||||||||| ||| |    
T  120047 gaaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccaccgggatctttctaggtcaaactgaaaccaaccccaaaggccatatca 120146  T
Q  132 attctattcaacttagggacggtaagcagttagaggac 169  Q
     |||||||   || ||||| ||||| || |||||||||    
T  120147 gttctattattctcagggatggtaaccaattagaggac 120184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 3502 - 3373
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||||||||| |||||| |||| |||||| || | ||||||||  ||||||| ||||| || |||  ||||||| || |  |||||||||||||||    
T  3502 atgtgtgatttgggggagaatgtcagtttgatgtcattgtccctttgtgaaagattaggtataggataggaaaacctttcttaatgtcaagctaatgact 3403  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| ||||||||||||||| ||||||||    
T  3402 ataaaggagcgcttcgtgggaggcaaccca 3373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1623 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1623
Description:

Target: scaffold1623; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 36 - 159
Alignment:
Q  33 aaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaaggccttataaa 132  Q
    |||| |||||||||||||| |||||| | ||  |||||||||||||| ||  ||   |||||||| ||||||||||| ||||||||||||||| |||||     
T  36 aaacccaaatctctcaagtggcccaacacgtgactacttcctctcaaaccatcgggatctttccaggtcaaactgaaaccaaccccaaaggccatataag 135  T
Q  133 ttctattcaacttagggacggtaa 156  Q
    |||||||   |||||||| |||||    
T  136 ttctattattcttagggatggtaa 159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1474 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1474
Description:

Target: scaffold1474; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 380 - 508
Target Start/End: Complemental strand, 890 - 761
Alignment:
Q  380 atgtgtgatttgggagagaatctcaggttgatgccactatccctttggaaaagattgggtattgggtagagaaacctt-ctaatcgtcaagctaatgact 478  Q
    |||||||||||||| || ||| |||  || |||||| | ||||||||  ||||||||||||| || ||| |||||||| || |  |||||||||||||||    
T  890 atgtgtgatttgggggaaaatgtcaatttcatgccattgtccctttgtgaaagattgggtataggatagggaaacctttcttaatgtcaagctaatgact 791  T
Q  479 ctaaaagagcgcttcgtgggatgcaaccca 508  Q
     |||| |||||||| |||||| ||||||||    
T  790 ataaaggagcgctttgtgggaggcaaccca 761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 50983 - 50907
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  50983 cgtcaagctaatgactataaaagagcgcttcatgggaggcaacccacgcatttaactgcttttgttttgtttgtttt 50907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 463 - 538
Target Start/End: Original strand, 35726 - 35801
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgttt 538  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||| |  ||| ||||||||| |||| |||||||    
T  35726 cgtcaagctaatgactttaaacgagcgcttcgtgggaggcaacccacgcatttaattgcttttgttttatttgttt 35801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1620 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 1360 - 1316
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||    
T  1360 gtcaagctaatgactataaaagagcgcttcgtgggaggcaaccca 1316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 21750 - 21674
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||| |||| ||||||||||||||| ||||||||    ||| | ||||||| |||||||||||||    
T  21750 cgtcaagctaatgactataaaggagcgcttcgtgggaggcaacccacacatttaactgcttttgttttgtttgtttt 21674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 121
Target Start/End: Original strand, 23727 - 23823
Alignment:
Q  25 aatgctagaaactcaaatctctcaagtagcccaaaaagtagctacttcctctcaagcccccgaagtctttccaagtcaaactgaagccaaccccaaa 121  Q
    |||||| |||||||||||||| ||||| |||||| |  |  |||||||||||||| |  | | ||||||||| |||||||| |||||||||||||||    
T  23727 aatgcttgaaactcaaatctcccaagtggcccaacagttgactacttcctctcaaacatcgggagtctttcctagtcaaaccgaagccaaccccaaa 23823  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 197061 - 196990
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  197061 cgtcaagctaatgactataaaaaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 196990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 464 - 510
Target Start/End: Original strand, 1209 - 1255
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatg 510  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||||    
T  1209 gtcaagctaatgactataaaggagcgcttcgtgggaggcaacccatg 1255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 541
Target Start/End: Original strand, 171185 - 171247
Alignment:
Q  480 taaaagagcgcttcgtgggatgcaacccatgagttttattg-cttttattttgtttgttttgt 541  Q
    |||||||||||||||||||| |||||||| |||||| ||||  ||||||||| ||||||||||    
T  171185 taaaagagcgcttcgtgggaggcaacccacgagtttaattgtattttattttttttgttttgt 171247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 524
Target Start/End: Original strand, 8971 - 9031
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttt 524  Q
    ||||||||| ||||  |||||||||||||||||||| |||||||| || ||| ||||||||    
T  8971 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaacccacgaatttaattgcttt 9031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 9581 - 9537
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||| |||| ||||||||||||||| ||||||||    
T  9581 gtcaagctaatgactataaaggagcgcttcgtgggaggcaaccca 9537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 508
Target Start/End: Complemental strand, 35936 - 35884
Alignment:
Q  456 ttctaatcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||| ||| |||||||||||| |||| ||||||||||||||| ||||||||    
T  35936 ttctaaccgttaagctaatgactataaaggagcgcttcgtgggaggcaaccca 35884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0613 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0613
Description:

Target: scaffold0613; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Complemental strand, 9185 - 9114
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  9185 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgttt 9114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 463 - 534
Target Start/End: Original strand, 6446 - 6517
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgttt 534  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| ||||||||    
T  6446 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaaatgcttttgttttgttt 6517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 463 - 533
Target Start/End: Complemental strand, 1830 - 1760
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtt 533  Q
    |||||||||||||||| ||||  |||||||||||||| |||||||| |  ||| | ||||||| |||||||    
T  1830 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaacccacgcatttaactgcttttgttttgtt 1760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 508
Target Start/End: Complemental strand, 597 - 551
Alignment:
Q  462 tcgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||| ||||  |||||||||||||||||||| ||||||||    
T  597 tcgtcaagctagtgacgttaaaagagcgcttcgtgggaggcaaccca 551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 539
Target Start/End: Original strand, 113774 - 113848
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||| |||| ||| ||||||||||| ||||||||    ||| | ||||||| |||||||||||||    
T  113774 tcaagctaatgactataaaggagtgcttcgtgggaggcaacccacacatttaactgcttttgttttgtttgtttt 113848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 539
Target Start/End: Original strand, 118078 - 118152
Alignment:
Q  465 tcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||| |||| ||| ||||||||||| ||||||||    ||| | ||||||| |||||||||||||    
T  118078 tcaagctaatgactataaaggagtgcttcgtgggaggcaacccacacatttaactgcttttgttttgtttgtttt 118152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1589 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1589
Description:

Target: scaffold1589; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 62 - 17
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  62 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 17  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1400 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1400
Description:

Target: scaffold1400; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 1573 - 1528
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  1573 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 771 - 816
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||    
T  771 cgtcaagctaatgacattaaaaaagcgcttcgtgggaggcaaccca 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 2819 - 2774
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| |||| ||||||||| ||||| ||||||||    
T  2819 cgtcaagctaatgactataaaggagcgcttcctgggaggcaaccca 2774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 5165 - 5120
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  5165 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 5120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0164 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 36309 - 36354
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  36309 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 36354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 59548 - 59503
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| |||| ||||| ||||||||| ||||||||    
T  59548 cgtcaagctaatgactataaaggagcgattcgtgggaggcaaccca 59503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 41024 - 40979
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||  ||||| |||||||||||||| ||||||||    
T  41024 cgtcaagctaatgacattaaaaaagcgcttcgtgggaggcaaccca 40979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Original strand, 89271 - 89316
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  89271 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 89316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 508
Target Start/End: Complemental strand, 211891 - 211846
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    |||||||||||||||| ||||  |||||||||||||| ||||||||    
T  211891 cgtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 211846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Original strand, 190410 - 190455
Alignment:
Q  343 cccttgtgtgattgagagtgaaaccattgaaaaaactatgtgtgat 388  Q
    |||||||||||||| ||||||||||||||| ||| | |||||||||    
T  190410 cccttgtgtgattgggagtgaaaccattgagaaagccatgtgtgat 190455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2037 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold2037
Description:

Target: scaffold2037; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 424 - 380
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  424 gtcaagctagtgacggtaaaagagcgcttcgtgggaggcaaccca 380  T

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Target: scaffold0932 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 104 - 60
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  104 gtcaagctagtgacgataaaagagcgcttcgtgggaggcaaccca 60  T

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Target: scaffold0873 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0873
Description:

Target: scaffold0873; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 2869 - 2825
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  2869 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaaccca 2825  T

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Target: scaffold0802 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 507 - 431
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||| ||||| |||| ||| |||| |||||| |||||||| |  ||| | ||||||| |||||||||||||    
T  507 cgtcaagctactgactataaaggagtgctttgtgggaggcaacccacgcatttaactgcttttgttttgtttgtttt 431  T

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Target: scaffold0443 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 101 - 133
Target Start/End: Original strand, 10525 - 10557
Alignment:
Q  101 caaactgaagccaaccccaaaggccttataaat 133  Q
    |||||| ||||||||||||||||||||||||||    
T  10525 caaacttaagccaaccccaaaggccttataaat 10557  T

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Target: scaffold0326 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 6592 - 6632
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    ||||||||||||||| |||| ||||||||||||||| ||||    
T  6592 gtcaagctaatgactataaaggagcgcttcgtgggaggcaa 6632  T

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Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 504
Target Start/End: Original strand, 14494 - 14534
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaa 504  Q
    ||||||||||||||| |||| ||||||||||||||| ||||    
T  14494 gtcaagctaatgactataaaggagcgcttcgtgggaggcaa 14534  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 23562 - 23518
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  23562 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaaccca 23518  T

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Target: scaffold0162 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 36459 - 36415
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||| ||||  |||||||||||||||||||| ||||||||    
T  36459 gtcaagctagtgacaataaaagagcgcttcgtgggaggcaaccca 36415  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 539
Target Start/End: Complemental strand, 22646 - 22570
Alignment:
Q  463 cgtcaagctaatgactctaaaagagcgcttcgtgggatgcaacccatgagttttattgcttttattttgtttgtttt 539  Q
    |||||||||||||||| ||||  ||||||||||| || |||||||| |  ||| | ||||||  |||||||||||||    
T  22646 cgtcaagctaatgactataaagaagcgcttcgtgcgaggcaacccacgcatttaactgctttcgttttgtttgtttt 22570  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 464 - 508
Target Start/End: Complemental strand, 25192 - 25148
Alignment:
Q  464 gtcaagctaatgactctaaaagagcgcttcgtgggatgcaaccca 508  Q
    ||||||||||||||| ||||  |||||||||||||| ||||||||    
T  25192 gtcaagctaatgactataaagaagcgcttcgtgggaggcaaccca 25148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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