View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5004-Insertion-7 (Length: 256)
Name: NF5004-Insertion-7
Description: NF5004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5004-Insertion-7 |
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Alignment Details
Target: chr1 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 50141555 - 50141310
Alignment:
| Q |
8 |
ctatggaattattttgtagagaaaaagggtccttttccatttaccccccaaccccacgcatccaacagcaataatattcccatcaatcaatatttgtcca |
107 |
Q |
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| T |
50141555 |
ctatggaattattttgtagagaaaaagggtccttttctatttaccccccaaccccacgcatccaacagcaataatattcccatcaatcaatatttctcca |
50141456 |
T |
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| Q |
108 |
tgaactcgtgtctatgcttctatcatgcacgagataaataattttggaacctaacaaagcgatggcctaacccaatcaattccaatatccatgtttatct |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50141455 |
tgaactcgtgtctatgcttctatcatgcacgagataaataattttggaacctaacaaagcgatggcctaacccaatcaattccaatatccatgtttatct |
50141356 |
T |
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| Q |
208 |
atgtatgcaaaaaaggacaaagctcacatacacaccgtccactcac |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50141355 |
atgtatgcaaaaaaggacaaagctcacatacacaccgtccactcac |
50141310 |
T |
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