View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5006_high_14 (Length: 271)

Name: NF5006_high_14
Description: NF5006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5006_high_14
NF5006_high_14
[»] chr8 (49 HSPs)
chr8 (110-271)||(7295139-7295300)
chr8 (168-271)||(13186329-13186432)
chr8 (168-271)||(36928746-36928849)
chr8 (194-270)||(7294157-7294233)
chr8 (185-271)||(34177257-34177343)
chr8 (185-270)||(34176497-34176582)
chr8 (168-271)||(1425108-1425211)
chr8 (168-267)||(12199009-12199108)
chr8 (168-267)||(12443437-12443536)
chr8 (168-271)||(40318019-40318122)
chr8 (185-271)||(34061615-34061701)
chr8 (170-271)||(34685530-34685631)
chr8 (176-271)||(23663600-23663695)
chr8 (168-271)||(38955942-38956045)
chr8 (169-267)||(22915448-22915546)
chr8 (190-271)||(38862855-38862936)
chr8 (190-271)||(8316708-8316789)
chr8 (170-271)||(35756854-35756955)
chr8 (168-271)||(20385623-20385726)
chr8 (168-271)||(30711987-30712090)
chr8 (168-271)||(30719764-30719867)
chr8 (168-271)||(31608783-31608886)
chr8 (170-271)||(4994712-4994813)
chr8 (190-267)||(12272977-12273054)
chr8 (168-265)||(16388796-16388893)
chr8 (190-263)||(39071934-39072007)
chr8 (168-235)||(2266731-2266798)
chr8 (168-235)||(3041547-3041614)
chr8 (168-271)||(30710910-30711013)
chr8 (168-235)||(38845390-38845457)
chr8 (168-267)||(40318234-40318333)
chr8 (168-235)||(40775741-40775808)
chr8 (168-235)||(44406948-44407015)
chr8 (185-267)||(2534754-2534836)
chr8 (185-267)||(10445620-10445702)
chr8 (185-267)||(25124848-25124930)
chr8 (185-263)||(44664571-44664649)
chr8 (168-265)||(11674933-11675030)
chr8 (185-246)||(15230216-15230277)
chr8 (190-267)||(23698368-23698445)
chr8 (170-267)||(36928535-36928632)
chr8 (207-267)||(25124622-25124682)
chr8 (168-235)||(8747534-8747601)
chr8 (209-267)||(7983487-7983545)
chr8 (218-271)||(20386750-20386803)
chr8 (214-267)||(34060548-34060601)
chr8 (174-246)||(31608593-31608665)
chr8 (207-271)||(36186156-36186220)
chr8 (207-267)||(37542283-37542343)
[»] chr5 (58 HSPs)
chr5 (124-270)||(11740743-11740889)
chr5 (168-271)||(38475088-38475191)
chr5 (168-271)||(32242512-32242615)
chr5 (170-271)||(28269477-28269578)
chr5 (168-271)||(5024074-5024177)
chr5 (168-271)||(6301813-6301916)
chr5 (168-271)||(11761987-11762090)
chr5 (168-271)||(27587385-27587488)
chr5 (168-271)||(39453569-39453672)
chr5 (185-271)||(11741804-11741890)
chr5 (170-271)||(5994161-5994262)
chr5 (170-271)||(6301598-6301699)
chr5 (170-271)||(43159086-43159187)
chr5 (171-271)||(29646417-29646517)
chr5 (168-271)||(6150690-6150793)
chr5 (168-271)||(8322674-8322777)
chr5 (168-271)||(11047707-11047810)
chr5 (168-271)||(14194478-14194581)
chr5 (174-271)||(3528928-3529025)
chr5 (170-263)||(13362290-13362383)
chr5 (168-271)||(16156910-16157013)
chr5 (168-271)||(17202669-17202772)
chr5 (168-271)||(19517877-19517980)
chr5 (168-271)||(19892363-19892466)
chr5 (168-271)||(21265198-21265301)
chr5 (168-271)||(28770924-28771027)
chr5 (168-270)||(16083213-16083315)
chr5 (168-271)||(186689-186792)
chr5 (168-271)||(35920283-35920386)
chr5 (170-271)||(20814190-20814291)
chr5 (174-271)||(38442343-38442440)
chr5 (207-270)||(27937109-27937172)
chr5 (220-271)||(42265790-42265841)
chr5 (168-235)||(1506206-1506273)
chr5 (168-235)||(31482493-31482560)
chr5 (208-271)||(35512424-35512487)
chr5 (168-246)||(19892578-19892656)
chr5 (190-271)||(13963121-13963202)
chr5 (185-246)||(20153203-20153264)
chr5 (218-270)||(37992608-37992660)
chr5 (168-235)||(297105-297172)
chr5 (168-235)||(6757956-6758023)
chr5 (168-271)||(10684208-10684311)
chr5 (170-245)||(32242323-32242398)
chr5 (212-271)||(37991254-37991313)
chr5 (168-267)||(39453359-39453458)
chr5 (181-267)||(5255077-5255162)
chr5 (173-267)||(35512207-35512301)
chr5 (168-249)||(186496-186577)
chr5 (170-267)||(5993948-5994045)
chr5 (222-271)||(21257485-21257534)
chr5 (190-259)||(24547257-24547326)
chr5 (168-265)||(41930755-41930852)
chr5 (185-245)||(8875530-8875590)
chr5 (168-264)||(14194693-14194789)
chr5 (207-267)||(20152840-20152900)
chr5 (195-263)||(24141515-24141583)
chr5 (207-267)||(33871398-33871458)
[»] chr2 (46 HSPs)
chr2 (121-271)||(25231071-25231221)
chr2 (168-271)||(15848358-15848461)
chr2 (168-271)||(37895402-37895505)
chr2 (168-271)||(39498549-39498652)
chr2 (185-271)||(6588738-6588824)
chr2 (168-271)||(6658117-6658220)
chr2 (168-271)||(10712993-10713096)
chr2 (168-271)||(11163109-11163212)
chr2 (168-271)||(16099294-16099397)
chr2 (168-270)||(34448065-34448167)
chr2 (168-270)||(36479988-36480090)
chr2 (193-270)||(30729677-30729754)
chr2 (168-270)||(39423785-39423887)
chr2 (179-271)||(13692501-13692593)
chr2 (190-271)||(44713850-44713931)
chr2 (184-263)||(3556295-3556374)
chr2 (191-271)||(3555305-3555385)
chr2 (207-267)||(36755397-36755457)
chr2 (207-271)||(45556356-45556420)
chr2 (168-235)||(13995764-13995831)
chr2 (168-267)||(36382220-36382319)
chr2 (170-271)||(9076339-9076440)
chr2 (186-271)||(44045290-44045375)
chr2 (168-235)||(1695831-1695898)
chr2 (168-263)||(10712786-10712881)
chr2 (168-235)||(33062141-33062208)
chr2 (168-235)||(41248650-41248717)
chr2 (185-267)||(15604624-15604706)
chr2 (170-227)||(2318430-2318487)
chr2 (210-271)||(36382439-36382500)
chr2 (170-267)||(37895619-37895716)
chr2 (168-267)||(15848147-15848246)
chr2 (170-265)||(44714033-44714128)
chr2 (185-267)||(8710753-8710835)
chr2 (209-267)||(15604398-15604456)
chr2 (185-271)||(25230157-25230243)
chr2 (185-263)||(41587297-41587375)
chr2 (170-267)||(2318217-2318314)
chr2 (185-246)||(11830444-11830505)
chr2 (218-271)||(44044169-44044222)
chr2 (174-243)||(6306992-6307063)
chr2 (207-263)||(8342250-8342306)
chr2 (168-228)||(22051092-22051152)
chr2 (207-267)||(28226051-28226111)
chr2 (170-246)||(36479798-36479874)
chr2 (185-241)||(41588343-41588399)
[»] chr4 (68 HSPs)
chr4 (123-236)||(30642371-30642484)
chr4 (174-263)||(39539194-39539283)
chr4 (168-271)||(7452073-7452176)
chr4 (168-271)||(17355980-17356083)
chr4 (168-271)||(34765435-34765538)
chr4 (168-271)||(35028053-35028156)
chr4 (168-271)||(44967124-44967227)
chr4 (174-271)||(13058258-13058355)
chr4 (168-265)||(49879268-49879365)
chr4 (170-263)||(50418731-50418824)
chr4 (171-271)||(18831590-18831690)
chr4 (168-264)||(46661184-46661280)
chr4 (190-269)||(10780770-10780849)
chr4 (190-269)||(10974379-10974458)
chr4 (168-271)||(36008899-36009002)
chr4 (168-271)||(43155584-43155687)
chr4 (168-271)||(51692789-51692892)
chr4 (168-271)||(24349729-24349832)
chr4 (168-263)||(24711350-24711445)
chr4 (168-267)||(37248475-37248574)
chr4 (168-271)||(37976208-37976311)
chr4 (185-271)||(54713684-54713770)
chr4 (190-271)||(1179092-1179173)
chr4 (190-269)||(24350724-24350803)
chr4 (168-271)||(52909523-52909626)
chr4 (168-268)||(35028268-35028368)
chr4 (168-271)||(10781754-10781857)
chr4 (168-271)||(14802006-14802108)
chr4 (168-270)||(15507729-15507831)
chr4 (185-267)||(27068969-27069051)
chr4 (185-263)||(55867401-55867479)
chr4 (170-263)||(8439496-8439589)
chr4 (170-271)||(23613550-23613651)
chr4 (168-249)||(42738108-42738189)
chr4 (170-271)||(53129561-53129662)
chr4 (168-235)||(34837165-34837232)
chr4 (168-235)||(38012409-38012476)
chr4 (207-269)||(5369176-5369238)
chr4 (185-267)||(10408174-10408256)
chr4 (205-271)||(11108147-11108213)
chr4 (134-236)||(32062679-32062779)
chr4 (185-267)||(50750946-50751028)
chr4 (185-267)||(54858619-54858701)
chr4 (218-267)||(11448049-11448098)
chr4 (170-267)||(53129778-53129875)
chr4 (169-246)||(53701892-53701969)
chr4 (168-245)||(53702082-53702159)
chr4 (231-271)||(24411681-24411721)
chr4 (207-246)||(5818082-5818121)
chr4 (168-235)||(9144857-9144924)
chr4 (168-267)||(14801795-14801894)
chr4 (168-235)||(22567038-22567105)
chr4 (168-235)||(32950381-32950448)
chr4 (168-267)||(34765650-34765749)
chr4 (207-265)||(27149303-27149361)
chr4 (185-267)||(52573287-52573369)
chr4 (173-271)||(54086750-54086848)
chr4 (185-270)||(148042-148127)
chr4 (168-265)||(9400580-9400677)
chr4 (185-246)||(27891664-27891725)
chr4 (218-271)||(39538135-39538188)
chr4 (218-267)||(50418957-50419006)
chr4 (185-246)||(50503905-50503966)
chr4 (185-246)||(51859487-51859548)
chr4 (219-271)||(147374-147426)
chr4 (207-267)||(3032641-3032701)
chr4 (207-267)||(45463132-45463192)
chr4 (207-263)||(54858867-54858923)
[»] chr1 (65 HSPs)
chr1 (168-271)||(6367832-6367935)
chr1 (168-271)||(183276-183379)
chr1 (168-271)||(32917530-32917633)
chr1 (168-271)||(49722996-49723099)
chr1 (171-271)||(30711600-30711700)
chr1 (168-271)||(40210425-40210528)
chr1 (170-271)||(1841731-1841831)
chr1 (170-267)||(26024664-26024761)
chr1 (168-271)||(1103731-1103834)
chr1 (168-271)||(7821224-7821327)
chr1 (168-271)||(41099003-41099106)
chr1 (168-271)||(43759092-43759195)
chr1 (168-271)||(47999178-47999281)
chr1 (168-271)||(48779389-48779492)
chr1 (170-271)||(13914123-13914224)
chr1 (168-271)||(4960595-4960698)
chr1 (168-267)||(7821013-7821112)
chr1 (168-271)||(19017684-19017787)
chr1 (168-271)||(37578247-37578350)
chr1 (170-271)||(19322947-19323048)
chr1 (170-271)||(19323164-19323265)
chr1 (170-270)||(23209417-23209517)
chr1 (172-271)||(17661906-17662004)
chr1 (209-271)||(4960820-4960882)
chr1 (207-271)||(24009630-24009694)
chr1 (171-271)||(36694337-36694437)
chr1 (171-271)||(36710438-36710538)
chr1 (170-267)||(6367621-6367718)
chr1 (168-265)||(24905228-24905325)
chr1 (168-235)||(4716559-4716626)
chr1 (168-235)||(14879241-14879308)
chr1 (168-267)||(30711386-30711485)
chr1 (168-235)||(31514409-31514476)
chr1 (168-235)||(33442685-33442752)
chr1 (168-267)||(34464508-34464607)
chr1 (168-271)||(34850335-34850438)
chr1 (168-235)||(52134307-52134374)
chr1 (185-271)||(5734998-5735084)
chr1 (185-267)||(45750127-45750209)
chr1 (185-271)||(46899887-46899973)
chr1 (170-267)||(13914339-13914436)
chr1 (207-267)||(20760812-20760872)
chr1 (168-263)||(17662120-17662215)
chr1 (168-267)||(24009811-24009910)
chr1 (185-236)||(35038545-35038596)
chr1 (168-267)||(40210640-40210739)
chr1 (185-267)||(28324863-28324945)
chr1 (168-246)||(35152613-35152691)
chr1 (185-263)||(40714507-40714585)
chr1 (185-271)||(46899116-46899202)
chr1 (185-267)||(49955406-49955488)
chr1 (185-246)||(7371370-7371431)
chr1 (218-267)||(17691278-17691327)
chr1 (218-267)||(17692505-17692554)
chr1 (170-271)||(19017901-19018002)
chr1 (168-265)||(28011607-28011704)
chr1 (218-271)||(34849066-34849119)
chr1 (219-267)||(5734068-5734116)
chr1 (207-267)||(12905966-12906026)
chr1 (207-267)||(17189013-17189073)
chr1 (207-267)||(31051009-31051069)
chr1 (207-267)||(35040921-35040981)
chr1 (207-267)||(40714750-40714810)
chr1 (219-271)||(48691203-48691255)
chr1 (207-263)||(49955654-49955710)
[»] chr7 (50 HSPs)
chr7 (174-271)||(17885683-17885780)
chr7 (168-271)||(27991978-27992081)
chr7 (168-270)||(13386017-13386119)
chr7 (125-236)||(12229299-12229410)
chr7 (168-271)||(2640233-2640336)
chr7 (168-271)||(3914408-3914511)
chr7 (168-271)||(17102259-17102362)
chr7 (168-267)||(19204728-19204827)
chr7 (168-263)||(32053206-32053301)
chr7 (168-271)||(48788858-48788961)
chr7 (168-266)||(33809374-33809472)
chr7 (168-267)||(22871367-22871466)
chr7 (168-270)||(28469066-28469167)
chr7 (185-271)||(33808378-33808464)
chr7 (203-271)||(42362505-42362573)
chr7 (173-271)||(6253715-6253813)
chr7 (210-271)||(10936106-10936167)
chr7 (190-271)||(27396684-27396765)
chr7 (168-271)||(42019652-42019755)
chr7 (168-266)||(42731689-42731787)
chr7 (185-267)||(43124439-43124521)
chr7 (186-271)||(17886778-17886863)
chr7 (207-271)||(24389094-24389158)
chr7 (168-235)||(30948251-30948318)
chr7 (168-235)||(34928741-34928808)
chr7 (168-235)||(39686625-39686692)
chr7 (168-271)||(40379824-40379927)
chr7 (185-267)||(18087625-18087707)
chr7 (185-263)||(25628541-25628619)
chr7 (168-246)||(37657120-37657198)
chr7 (185-267)||(42618196-42618278)
chr7 (218-271)||(40380004-40380057)
chr7 (218-271)||(45010924-45010977)
chr7 (218-271)||(47945412-47945465)
chr7 (218-271)||(47950842-47950895)
chr7 (168-271)||(5457177-5457280)
chr7 (168-263)||(28469278-28469373)
chr7 (168-235)||(32680686-32680753)
chr7 (185-263)||(18086352-18086430)
chr7 (185-267)||(32068381-32068463)
chr7 (190-263)||(6571240-6571313)
chr7 (170-267)||(42731478-42731575)
chr7 (185-246)||(43266346-43266407)
chr7 (207-267)||(22081866-22081926)
chr7 (207-267)||(25453187-25453247)
chr7 (207-267)||(25453435-25453495)
chr7 (207-267)||(25628785-25628845)
chr7 (207-267)||(32068155-32068215)
chr7 (207-267)||(32934407-32934467)
chr7 (207-263)||(46205616-46205672)
[»] chr6 (30 HSPs)
chr6 (174-271)||(11434857-11434954)
chr6 (170-271)||(21627768-21627869)
chr6 (168-271)||(33517804-33517907)
chr6 (170-271)||(3059528-3059629)
chr6 (168-265)||(17734257-17734354)
chr6 (168-267)||(30337688-30337787)
chr6 (168-271)||(30804131-30804234)
chr6 (171-271)||(30726032-30726132)
chr6 (168-271)||(33647221-33647324)
chr6 (170-271)||(12080908-12081009)
chr6 (168-271)||(680998-681101)
chr6 (182-271)||(20651931-20652020)
chr6 (168-271)||(679921-680024)
chr6 (168-235)||(28000476-28000543)
chr6 (168-267)||(33517593-33517692)
chr6 (185-263)||(8089506-8089584)
chr6 (185-271)||(20651065-20651151)
chr6 (170-235)||(362961-363026)
chr6 (190-271)||(11393096-11393177)
chr6 (218-271)||(13379802-13379855)
chr6 (168-267)||(21627983-21628082)
chr6 (208-267)||(21836090-21836149)
chr6 (185-267)||(7160863-7160945)
chr6 (185-267)||(21836315-21836397)
chr6 (185-267)||(22502833-22502915)
chr6 (185-267)||(22503059-22503141)
chr6 (185-267)||(31407163-31407245)
chr6 (214-271)||(12408487-12408544)
chr6 (207-247)||(6517581-6517621)
chr6 (155-263)||(15115402-15115510)
[»] chr3 (43 HSPs)
chr3 (168-271)||(23458034-23458137)
chr3 (168-271)||(46475051-46475154)
chr3 (168-267)||(19740982-19741081)
chr3 (168-271)||(36417958-36418061)
chr3 (208-271)||(42855615-42855678)
chr3 (168-270)||(43384553-43384655)
chr3 (170-271)||(33689436-33689537)
chr3 (170-271)||(53756995-53757096)
chr3 (168-271)||(9367796-9367899)
chr3 (208-271)||(36417743-36417806)
chr3 (190-271)||(40758402-40758483)
chr3 (185-265)||(37778558-37778638)
chr3 (168-246)||(55052359-55052437)
chr3 (170-267)||(23458251-23458348)
chr3 (168-267)||(33689649-33689748)
chr3 (168-235)||(54466662-54466729)
chr3 (185-267)||(4323489-4323571)
chr3 (181-271)||(9294013-9294103)
chr3 (185-267)||(29118823-29118905)
chr3 (185-267)||(40788705-40788787)
chr3 (185-271)||(41558169-41558255)
chr3 (185-267)||(47551552-47551634)
chr3 (185-267)||(52032197-52032279)
chr3 (168-265)||(36314359-36314456)
chr3 (168-265)||(48322438-48322535)
chr3 (207-267)||(10307682-10307742)
chr3 (207-267)||(11910758-11910818)
chr3 (207-271)||(26463687-26463751)
chr3 (121-185)||(44961266-44961330)
chr3 (207-267)||(52032446-52032506)
chr3 (185-264)||(3469262-3469341)
chr3 (212-271)||(3849086-3849145)
chr3 (168-235)||(8041855-8041922)
chr3 (168-267)||(9294228-9294327)
chr3 (185-267)||(35643910-35643992)
chr3 (168-265)||(10770551-10770648)
chr3 (185-246)||(32306504-32306565)
chr3 (218-271)||(41558063-41558116)
chr3 (207-267)||(3469507-3469567)
chr3 (207-267)||(13948839-13948899)
chr3 (207-267)||(32306731-32306791)
chr3 (174-246)||(35712111-35712183)
chr3 (207-271)||(42343040-42343104)
[»] scaffold0075 (1 HSPs)
scaffold0075 (168-270)||(14485-14587)
[»] scaffold0031 (2 HSPs)
scaffold0031 (168-271)||(69235-69338)
scaffold0031 (171-264)||(69027-69120)
[»] scaffold0020 (1 HSPs)
scaffold0020 (168-271)||(139911-140014)
[»] scaffold0775 (2 HSPs)
scaffold0775 (185-270)||(5018-5103)
scaffold0775 (185-263)||(6265-6343)
[»] scaffold0707 (1 HSPs)
scaffold0707 (207-271)||(6388-6452)
[»] scaffold0005 (2 HSPs)
scaffold0005 (168-271)||(37619-37721)
scaffold0005 (168-267)||(37833-37932)
[»] scaffold0042 (1 HSPs)
scaffold0042 (185-267)||(12065-12147)
[»] scaffold0007 (1 HSPs)
scaffold0007 (168-265)||(2008-2108)
[»] scaffold0128 (1 HSPs)
scaffold0128 (185-267)||(19916-19998)
[»] scaffold0024 (1 HSPs)
scaffold0024 (170-235)||(141685-141750)
[»] scaffold0599 (1 HSPs)
scaffold0599 (207-267)||(2452-2512)
[»] scaffold0295 (1 HSPs)
scaffold0295 (168-235)||(2413-2480)
[»] scaffold0006 (2 HSPs)
scaffold0006 (208-267)||(221849-221908)
scaffold0006 (185-267)||(222074-222156)
[»] scaffold0388 (1 HSPs)
scaffold0388 (185-263)||(12524-12602)
[»] scaffold0328 (2 HSPs)
scaffold0328 (185-267)||(11199-11281)
scaffold0328 (185-263)||(11425-11503)
[»] scaffold0220 (1 HSPs)
scaffold0220 (151-197)||(23360-23406)
[»] scaffold0771 (1 HSPs)
scaffold0771 (207-267)||(979-1039)
[»] scaffold0559 (1 HSPs)
scaffold0559 (168-235)||(1472-1540)


Alignment Details
Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 110 - 271
Target Start/End: Original strand, 7295139 - 7295300
Alignment:
Q  110 gatgaagatatataggggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggt 209  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7295139 gatgaagatatataggggtaaaattgtcatttcacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggt 7295238  T
Q  210 caaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  7295239 caaaggatgaaattttaaacgattaaagaatgcaagactagtttgcaaggattagcgaatac 7295300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 13186329 - 13186432
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| ||| ||||||| || ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  13186329 gccacgtcatcaaattagtgacgtggcagtgattaacttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 13186428  T
Q  268 atac 271  Q
    ||||    
T  13186429 atac 13186432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 36928746 - 36928849
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||||||||||| |    
T  36928746 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaa 36928845  T
Q  268 atac 271  Q
    ||||    
T  36928846 atac 36928849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 7294233 - 7294157
Alignment:
Q  194 cagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||    
T  7294233 cagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgcaaggctagtttacaaggattagcgaata 7294157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 34177257 - 34177343
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||||||| | |||||||| ||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||    
T  34177257 atgatgtggcagtcattaagtgggtcaagggacgaaattttaaatgattaaagaatgcaaggctagtttacaaggattagcgaatac 34177343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 34176582 - 34176497
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    ||||| || |||| ||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||    
T  34176582 atgacctgacagtgattaactgggtcaaaggatgaaattttaaatgattaaagaatgcaagactagtttgcaaggattaacgaata 34176497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 1425211 - 1425108
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||| | ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||| ||    
T  1425211 gccacgtcatcaaattagtgacgtggcaatgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtga 1425112  T
Q  268 atac 271  Q
    ||||    
T  1425111 atac 1425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 12199108 - 12199009
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| |||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  12199108 gccacgtcatcaaattagtgacgtgacagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 12199009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 12443536 - 12443437
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| |||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  12443536 gccacgtcatcaaattagtgacgtgacagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 12443437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 40318122 - 40318019
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | ||||||| || | ||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  40318122 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaatgacgcaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 40318023  T
Q  268 atac 271  Q
    ||||    
T  40318022 atac 40318019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 34061615 - 34061701
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||||||| ||| ||| |||||||||| ||||||||||| |||||||||||||||||  | |||||||||||||||||||||    
T  34061615 atgacatggcagtgattaacttggtcaaaggacgaaattttaaatgattaaagaatgcaagggcaatttgcaaggattagcgaatac 34061701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 34685530 - 34685631
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| ||||||| |||| ||| | | ||||||| || ||||||||||| |||||| || || |||| ||||||||||||||||||||||    
T  34685530 cacgtcatcaaattagtgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaat 34685629  T
Q  270 ac 271  Q
    ||    
T  34685630 ac 34685631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 176 - 271
Target Start/End: Complemental strand, 23663695 - 23663600
Alignment:
Q  176 atcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || | |||||||||||| ||||||||| |||||||    
T  23663695 atcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggttagtttccaaggattaacgaatac 23663600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 38955942 - 38956045
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| |||| ||| | | | ||||||||  |||||||||| |||||| || ||||||| |||||| |||||||||||||    
T  38955942 gccacgtcatcaaattagtgacgtgacagtgattaagttgatcaaaggactaaattttaaatgattaatgattgcaaggctagtttacaaggattagcga 38956041  T
Q  268 atac 271  Q
    ||||    
T  38956042 atac 38956045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 22915546 - 22915448
Alignment:
Q  169 ccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||||||||| |||||||||| | ||| | | ||||||| || |||||| |||| |||||| || ||||||| ||||||||||||||||||||    
T  22915546 ccacgtcatcaaattagtgacgtggcaatgattaaattggtcaaaagacgaaattgtaaatgattaatgattgcaaggctagtttgcaaggattagcga 22915448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 38862855 - 38862936
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  38862855 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 38862936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 8316789 - 8316708
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||||||||| |||||||    
T  8316789 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaatac 8316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 35756854 - 35756955
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    |||||||||  |||| ||||||||||||  || | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||||||||| |||||    
T  35756854 cacgtcatcgtattagtgacgtggcagtgcttaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaat 35756953  T
Q  270 ac 271  Q
    ||    
T  35756954 ac 35756955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 20385726 - 20385623
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | |||||||||||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  20385726 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 20385627  T
Q  268 atac 271  Q
    ||||    
T  20385626 atac 20385623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 30711987 - 30712090
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | ||| |||||||| ||| |||||||  | ||| ||||||||||| |||||| || ||||||| |||||||||||||||||| |    
T  30711987 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaa 30712086  T
Q  268 atac 271  Q
    ||||    
T  30712087 atac 30712090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 30719764 - 30719867
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | ||| |||||||| ||| |||||||  | ||| ||||||||||| |||||| || ||||||| |||||||||||||||||| |    
T  30719764 gccacgtcagctaatcagtgatgtggcagtaattaactgggttcagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcaa 30719863  T
Q  268 atac 271  Q
    ||||    
T  30719864 atac 30719867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 31608783 - 31608886
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||| |||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||| | ||||||||| ||  ||||||||||||||||    
T  31608783 gccacgccatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattagacaatgcaagggtaaattgcaaggattagcga 31608882  T
Q  268 atac 271  Q
    ||||    
T  31608883 atac 31608886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 4994813 - 4994712
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| |||||  ||||||| ||| ||| | | ||||||| || |||||||||||  ||||| || ||||||| |||||| |||||||||||||||    
T  4994813 cacgtcatcgaattagcgacgtggtagtgattaagttggtcaaaagacgaaattttaaataattaatgattgcaaggctagtttccaaggattagcgaat 4994714  T
Q  270 ac 271  Q
    ||    
T  4994713 ac 4994712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 12273054 - 12272977
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| ||| | | |||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||||||||    
T  12273054 gtggcagtgattaaattggtcaaaggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcga 12272977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 16388796 - 16388893
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||    
T  16388796 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagc 16388893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 39071934 - 39072007
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||    
T  39071934 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 39072007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 2266731 - 2266798
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||| |||| ||| ||| | | ||||||||||| |||||||||||||||||    
T  2266731 gccacgtcatcaaattagtgatgtggaagtgattaatttggtcaaaggatcaaattttaaacgattaa 2266798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 3041614 - 3041547
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  3041614 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 3041547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 30711013 - 30710910
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | ||||||| |||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||||||||||||||  ||||||||    
T  30711013 gccacgtcaactaatcagtgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaaggttagtttgcaaaaattagcga 30710914  T
Q  268 atac 271  Q
    ||||    
T  30710913 atac 30710910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 38845457 - 38845390
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  38845457 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 38845390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 40318234 - 40318333
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| ||||||| ||| | || |   ||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  40318234 gccacgtcatcaaattagtgacatggcagtgattaagtgaggagaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 40318333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 40775808 - 40775741
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  40775808 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 40775741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 44407015 - 44406948
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  44407015 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 44406948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 2534836 - 2534754
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||| ||| ||||||   | ||| ||||||||||| ||||||| ||||||||  ||||||||||||||||||||    
T  2534836 atgatgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagagtagtttgcaaggattagcga 2534754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 10445620 - 10445702
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  10445620 atgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 10445702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 25124848 - 25124930
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | | |||||||||||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  25124848 atgacgtggcagtgattaagttgttcaaaggatgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcga 25124930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 44664649 - 44664571
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||||||  |||| |||||||    
T  44664649 atgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaaggttaaattgccaggatta 44664571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 11674933 - 11675030
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  11674933 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 11675030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 15230216 - 15230277
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| |||||||||    
T  15230216 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagg 15230277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 23698445 - 23698368
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| ||| | | |||||||||| ||||||||||  |||||| || ||||||| ||||||||||| ||||||||    
T  23698445 gtggcagtgattaaattggtcaaaggacgaaattttaactgattaatgattgcaaggctagtttgcaagaattagcga 23698368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 36928632 - 36928535
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  36928632 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 36928535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 25124682 - 25124622
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  25124682 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 25124622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 8747534 - 8747601
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||||||||| || ||| | ||||| || ||| ||||||||||| ||||||    
T  8747534 gccacgtcatcaaattactgacgtggcggtgattaagtgggttaagggacgaaattttaaatgattaa 8747601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 7983545 - 7983487
Alignment:
Q  209 tcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  7983545 tcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 7983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 20386750 - 20386803
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| ||||||  | ||| ||| ||||||||||||||||||||||||    
T  20386750 gaaattttaaatgattaataattgcgaggctagtttgcaaggattagcgaatac 20386803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 34060601 - 34060548
Alignment:
Q  214 ggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| ||||||| ||||||||||||||| |  | |||||||||||||||||    
T  34060601 ggatgaagttttaaatgattaaagaatgcaacgacaatttgcaaggattagcga 34060548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 31608665 - 31608593
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||| |||||||||||| ||| | |  |||||| || |||||||||||  ||||| ||||||||||    
T  31608665 tcatcaaattagtgacgtggcagtgattaagtttgtcaaatgacgaaattttaaattattaatgaatgcaagg 31608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 36186220 - 36186156
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| || |||||||||||  ||||| || |||||   ||||||||||||||||||||||||    
T  36186220 ggtcaaaagacgaaattttaaataattaatgattgcaatactagtttgcaaggattagcgaatac 36186156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 37542343 - 37542283
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| | ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  37542343 ggtcaaagaacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 37542283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 124 - 270
Target Start/End: Complemental strand, 11740889 - 11740743
Alignment:
Q  124 ggggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaatt 223  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  |||||    
T  11740889 ggggtaaaactgtcatttcacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtgacagtcattaactgggtcaaaggacaaaatt 11740790  T
Q  224 ttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||    
T  11740789 ttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaata 11740743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 38475191 - 38475088
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||| || ||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  38475191 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcga 38475092  T
Q  268 atac 271  Q
    ||||    
T  38475091 atac 38475088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 32242512 - 32242615
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  32242512 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 32242611  T
Q  268 atac 271  Q
    ||||    
T  32242612 atac 32242615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 28269578 - 28269477
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  28269578 cacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaat 28269479  T
Q  270 ac 271  Q
    ||    
T  28269478 ac 28269477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 5024177 - 5024074
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||  || ||||||| ||||||||||||||||||||    
T  5024177 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattagtgattgcaaggctagtttgcaaggattagcga 5024078  T
Q  268 atac 271  Q
    ||||    
T  5024077 atac 5024074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 6301813 - 6301916
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||||||||| |||    
T  6301813 gccacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacga 6301912  T
Q  268 atac 271  Q
    ||||    
T  6301913 atac 6301916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 11761987 - 11762090
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  11761987 gccacatcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 11762086  T
Q  268 atac 271  Q
    ||||    
T  11762087 atac 11762090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 27587385 - 27587488
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||| ||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  27587385 gccacgtcatcaaattagtgacgtagcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 27587484  T
Q  268 atac 271  Q
    ||||    
T  27587485 atac 27587488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 39453569 - 39453672
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||| |||||||||    
T  39453569 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcga 39453668  T
Q  268 atac 271  Q
    ||||    
T  39453669 atac 39453672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 11741804 - 11741890
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| || |||| ||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  11741804 atgacctgacagtgattaactgggtcaaaggacgaaattttaaatgattaaagaatgcaaggctagtttgcaaagattagcgaatac 11741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 5994161 - 5994262
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||| ||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||||    
T  5994161 cacgtcatcaaattagtgacatggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaat 5994260  T
Q  270 ac 271  Q
    ||    
T  5994261 ac 5994262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 6301699 - 6301598
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||||||||||| ||| | | |||||||||| |||||||||||  ||||| || ||||||  ||||||||||||||||||||||    
T  6301699 cacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaataattaatgattgcaagactagtttgcaaggattagcgaat 6301600  T
Q  270 ac 271  Q
    ||    
T  6301599 ac 6301598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 43159086 - 43159187
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||| ||||||||||||||    
T  43159086 cacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcgaat 43159185  T
Q  270 ac 271  Q
    ||    
T  43159186 ac 43159187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 29646517 - 29646417
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||| ||||| |||||||||||| ||| | | ||||||||||| |||||||||| |||||| || || |||| |||||||||||||||||||||||    
T  29646517 acgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggataaaattttaaatgattaatgattggaaggctagtttgcaaggattagcgaata 29646418  T
Q  271 c 271  Q
    |    
T  29646417 c 29646417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 6150690 - 6150793
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||| ||||| |||    
T  6150690 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattaacga 6150789  T
Q  268 atac 271  Q
    ||||    
T  6150790 atac 6150793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 8322674 - 8322777
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| ||||| |||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||||||||| |||    
T  8322674 gccacgtcatcgaattagtgacgcggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacga 8322773  T
Q  268 atac 271  Q
    ||||    
T  8322774 atac 8322777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 11047707 - 11047810
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||  ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||| ||    
T  11047707 gccacgtcattgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtga 11047806  T
Q  268 atac 271  Q
    ||||    
T  11047807 atac 11047810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 14194581 - 14194478
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| ||| |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  14194581 gccacgtcatcgaattagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 14194482  T
Q  268 atac 271  Q
    ||||    
T  14194481 atac 14194478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 3529025 - 3528928
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| |||||||||||||||||| |||||    
T  3529025 tcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcaaatac 3528928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 13362383 - 13362290
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||| |||||||||||| ||| | | ||||| |||| ||||||||||| |||||| || ||||||| ||||||||||||||||    
T  13362383 cacgtcatcaaattagtgacgtggcagtgattaagttggtcagaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 13362290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 16157013 - 16156910
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||||||||| |||    
T  16157013 gccatgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacga 16156914  T
Q  268 atac 271  Q
    ||||    
T  16156913 atac 16156910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 17202669 - 17202772
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||| ||||| |||||||||||| ||| | | ||||||| || ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  17202669 gccacatcatcgaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 17202768  T
Q  268 atac 271  Q
    ||||    
T  17202769 atac 17202772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 19517877 - 19517980
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| ||||||| ||| | | ||||||| ||  |||||||||| |||||| || ||||||| |||||||||| |||||||||    
T  19517877 gccacgtcatcaaattagtgacatggcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcga 19517976  T
Q  268 atac 271  Q
    ||||    
T  19517977 atac 19517980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 19892466 - 19892363
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| | |||||||||| ||| | | | |||||||| ||||||||||| |||||| || | ||||| |||||||||||||||| |||    
T  19892466 gccacgtcatcaaattagttacgtggcagtgattaagttgatcaaaggacgaaattttaaatgattaatgattacaaggctagtttgcaaggattaacga 19892367  T
Q  268 atac 271  Q
    ||||    
T  19892366 atac 19892363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 21265301 - 21265198
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| ||| ||||| |||||||||||| ||| | | |||||||||| |||||||||||  ||||| || ||||||| |||||||||||||||||| |    
T  21265301 gccacgttatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcaa 21265202  T
Q  268 atac 271  Q
    ||||    
T  21265201 atac 21265198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 28771027 - 28770924
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||| ||  |||||||||| ||| || || || |||| ||||||||||||||||||||    
T  28771027 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaatgactaaattttaaatgatcaatgattgtaaggctagtttgcaaggattagcga 28770928  T
Q  268 atac 271  Q
    ||||    
T  28770927 atac 28770924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 16083213 - 16083315
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| ||||||| ||| | | |||||||  | ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  16083213 gccacgtcatcaaattagtgacatggcagtgattaagttggtcaaataacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 16083312  T
Q  268 ata 270  Q
    |||    
T  16083313 ata 16083315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 186689 - 186792
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| ||||||| || | ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||| ||||||| |    
T  186689 gccacgtcatcgaattagtgacgtgacaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcaa 186788  T
Q  268 atac 271  Q
    ||||    
T  186789 atac 186792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 35920386 - 35920283
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||  | | ||| | | |||||||||| ||||||||||| |||||| || ||||||| || |||||||||||||||||    
T  35920386 gccacgtcatcgaattagtgacgtgatattgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctaatttgcaaggattagcga 35920287  T
Q  268 atac 271  Q
    ||||    
T  35920286 atac 35920283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 20814291 - 20814190
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||| ||| ||||| |||||||||||| ||| | | ||| |||||| ||||||||||| |||||| || |||||   ||||||||||||||||||||||    
T  20814291 cacgtgatcgaattagtgacgtggcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaatactagtttgcaaggattagcgaat 20814192  T
Q  270 ac 271  Q
    ||    
T  20814191 ac 20814190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 38442343 - 38442440
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| ||| ||| |||| ||| | | |||||||||| ||||||||||| | |||| || ||||||| |||||||||||||||| |||||||    
T  38442343 tcatcaaattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatggttaatgattgcaaggctagtttgcaaggattaacgaatac 38442440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 27937172 - 27937109
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    ||||||| || ||||||||||| |||||| || ||||||| |||||||||||||||||||||||    
T  27937172 ggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaata 27937109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 42265841 - 42265790
Alignment:
Q  220 aattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  42265841 aattttaaatcattaaagaatgcaaggctagtttgcaaggattagcgaatac 42265790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 1506206 - 1506273
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  1506206 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 1506273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 31482560 - 31482493
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  31482560 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 31482493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 35512424 - 35512487
Alignment:
Q  208 gtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||| || ||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||    
T  35512424 gtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatac 35512487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 19892578 - 19892656
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   || || ||||||||||| ||||||| |||||||||    
T  19892578 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagaatgacgaaattttaaatgattaaacaatgcaagg 19892656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 13963121 - 13963202
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | |||||||| | ||||||||||| |||||| || ||||||  |||||||||||||||| |||||||    
T  13963121 gtggcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaatac 13963202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 246
Target Start/End: Original strand, 20153203 - 20153264
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||| ||||| ||| | | |||||||||||||||||||||| ||||||| |||||||||    
T  20153203 atgacgtagcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgcaagg 20153264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 218 - 270
Target Start/End: Original strand, 37992608 - 37992660
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||||||||||||| || ||||||| |||||||||| ||||||| ||||    
T  37992608 gaaattttaaacgattaatgattgcaaggctagtttgcaaagattagcaaata 37992660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 297172 - 297105
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||| |||||||| ||| | | |||| |||||  |||||||||||||||||    
T  297172 gccacgtcatcaaattagtgatgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 297105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 6758023 - 6757956
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||    
T  6758023 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaa 6757956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 10684208 - 10684311
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| ||||||||| ||| ||  |||| ||| | | ||||||| || |||| |||||| |||||| || ||||||  ||||||||||||||||| ||    
T  10684208 gccacgttatcaaattagtgatgttacagtgattaagttggtcaaatgacgaaactttaaatgattaatgattgcaagactagtttgcaaggattagtga 10684307  T
Q  268 atac 271  Q
    ||||    
T  10684308 atac 10684311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 245
Target Start/End: Complemental strand, 32242398 - 32242323
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaag 245  Q
    ||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||    
T  32242398 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaag 32242323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 37991313 - 37991254
Alignment:
Q  212 aaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||||||| ||| |||||| || ||||||| |||||||||||||||| |||||||    
T  37991313 aaggacgaaatttgaaatgattaatgattgcaaggctagtttgcaaggattaacgaatac 37991254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 39453458 - 39453359
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| || |||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  39453458 gccacgtcatcaaattagtgacatgccagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 39453359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 267
Target Start/End: Complemental strand, 5255162 - 5255077
Alignment:
Q  181 attaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| ||||||| |||| ||| | | ||||||| || ||||||||||| ||||||  |||||||||||| ||||| |||||||||||    
T  5255162 attagtgacgtgacagtgattaagttggtcaaatgacgaaattttaaatgattaataaatgcaaggttaatttgc-aggattagcga 5255077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 35512301 - 35512207
Alignment:
Q  173 gtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||||| ||| |||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  35512301 gtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 35512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 186577 - 186496
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggtta 249  Q
    ||||||||||||||||| |||| ||| ||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||||||    
T  186577 gccacgtcatcaaattagtgacatggtagtgattaagtggggggagggacgaaattttaaatgattaaacaatgcaaggtta 186496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 5994045 - 5993948
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||| ||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  5994045 cacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcga 5993948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 21257485 - 21257534
Alignment:
Q  222 ttttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| |||||| ||  |||||| ||||||||||||||||||||||||    
T  21257485 ttttaaatgattaatgatcgcaaggctagtttgcaaggattagcgaatac 21257534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 259
Target Start/End: Complemental strand, 24547326 - 24547257
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaagg 259  Q
    |||||||| ||| | | ||||||| || ||||||||||| |||||| || ||||||| ||||||||||||    
T  24547326 gtggcagtgattaaattggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaagg 24547257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 41930755 - 41930852
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||| ||||||||||| |||||||| ||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  ||||||||||||||    
T  41930755 gccacctcatcaaattagtgacgtggtagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagc 41930852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 8875590 - 8875530
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaag 245  Q
    ||||||||||||| ||| | | |||||||| | ||||||||||| ||||||| ||||||||    
T  8875590 atgacgtggcagtgattaagttggtcaaagaacgaaattttaaatgattaaacaatgcaag 8875530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 14194693 - 14194789
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattag 264  Q
    ||||||||||||||||| |||| | ||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| ||||||||    
T  14194693 gccacgtcatcaaattagtgacatagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattag 14194789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 20152900 - 20152840
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  || | |||||||||||    
T  20152900 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaatttccaggattagcga 20152840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 24141583 - 24141515
Alignment:
Q  195 agtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||| | |||||||| ||||||||||||||| |||||||   ||||||| || ||||| |||||||    
T  24141583 agtcattaaatgggtcaagggatgaaattttaaatgattaaactttgcaaggctaatttgccaggatta 24141515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 33871458 - 33871398
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  33871458 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcga 33871398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 9e-42; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 121 - 271
Target Start/End: Original strand, 25231071 - 25231221
Alignment:
Q  121 ataggggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaa 220  Q
    |||||||||||| || ||||| |||||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||| ||| |||    
T  25231071 ataggggtaaaactgccatttcacgtgtgggttgaccaattaacagcgccacgtcatcatattaatgacgtggcagtcattaactgggacaagggacgaa 25231170  T
Q  221 attttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||||||||  ||||||| || ||||| |||||||||||||||    
T  25231171 attttaaatgattaaagtttgcaagggtaatttgctaggattagcgaatac 25231221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 15848358 - 15848461
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||||||||| ||||||||||||||    
T  15848358 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggttagttcgcaaggattagcga 15848457  T
Q  268 atac 271  Q
    ||||    
T  15848458 atac 15848461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 37895505 - 37895402
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| ||||||||| |||||||||||| ||| | | |||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  37895505 gccacgttatcaaattagtgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 37895406  T
Q  268 atac 271  Q
    ||||    
T  37895405 atac 37895402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 39498549 - 39498652
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||||| |||| |||||||||||| ||| | | ||||||||||| |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  39498549 gccacgtcatcatattagtgacgtggcagtgattaagttggtcaaaggattaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 39498648  T
Q  268 atac 271  Q
    ||||    
T  39498649 atac 39498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 6588824 - 6588738
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||||||| ||  |||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  6588824 atgacctggcagtgatcaactgggtcaaaggacgaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatac 6588738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 6658117 - 6658220
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || || |||| ||||||||||||||||||||    
T  6658117 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcga 6658216  T
Q  268 atac 271  Q
    ||||    
T  6658217 atac 6658220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 10712993 - 10713096
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| || |||||||| |||||| || ||||||| || |||||||||||||||||    
T  10712993 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgacattttaaatgattaacgattgcaaggctaatttgcaaggattagcga 10713092  T
Q  268 atac 271  Q
    ||||    
T  10713093 atac 10713096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 11163212 - 11163109
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  11163212 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 11163113  T
Q  268 atac 271  Q
    ||||    
T  11163112 atac 11163109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 16099294 - 16099397
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||| ||    
T  16099294 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagtga 16099393  T
Q  268 atac 271  Q
    ||||    
T  16099394 atac 16099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 34448065 - 34448167
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||||||||| |||    
T  34448065 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacga 34448164  T
Q  268 ata 270  Q
    |||    
T  34448165 ata 34448167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 36479988 - 36480090
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| |||||||||||  ||||| || ||||||| ||||||||||||||||||||    
T  36479988 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaattattaatgattgcaaggctagtttgcaaggattagcga 36480087  T
Q  268 ata 270  Q
    |||    
T  36480088 ata 36480090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 193 - 270
Target Start/End: Complemental strand, 30729754 - 30729677
Alignment:
Q  193 gcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  30729754 gcagtgattaactgggtcaaaggacgaaattttaaacgattaaagaatgcaagggcaatttgcaaggattagcgaata 30729677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 39423785 - 39423887
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  39423785 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 39423884  T
Q  268 ata 270  Q
    |||    
T  39423885 ata 39423887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 271
Target Start/End: Original strand, 13692501 - 13692593
Alignment:
Q  179 aaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||| ||||||| |||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  13692501 aaattagtgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 13692593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 44713931 - 44713850
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  44713931 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 44713850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 263
Target Start/End: Original strand, 3556295 - 3556374
Alignment:
Q  184 aatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||||||| | |||  ||| || |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  3556295 aatgacgtggcattgattagctgagttaaaggaggaaattttaaatgattaaagaatgcaaggctagtttgcaaggatta 3556374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 271
Target Start/End: Complemental strand, 3555385 - 3555305
Alignment:
Q  191 tggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| ||| ||||||| |||||| ||||||||||| ||||||||||||||||| || |||| ||||| || |||||||    
T  3555385 tggcagtgattaactgggttaaaggacgaaattttaaatgattaaagaatgcaaggctaatttgtaaggaataacgaatac 3555305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 36755397 - 36755457
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  36755397 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 36755457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 45556356 - 45556420
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||||| |||||| || ||||||| |||||||||| |||||||||||||    
T  45556356 ggtcaaaggattaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcgaatac 45556420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 13995831 - 13995764
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||||||||||    
T  13995831 gccacgtcatcaaattagtgacgtggcagtgattaatttggtcaaaggaccaaattttaaacgattaa 13995764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 36382319 - 36382220
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | ||||||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  36382319 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 36382220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 9076339 - 9076440
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| ||| |||||||| ||| | | ||| ||| || ||||||||||| |||||| || ||||||  |||||||||||||||| |||||    
T  9076339 cacgtcatcgaattagtgatgtggcagtgattaagttggttaaatgacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaat 9076438  T
Q  270 ac 271  Q
    ||    
T  9076439 ac 9076440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 44045290 - 44045375
Alignment:
Q  186 tgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||||| ||| ||||||   | |||  |||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  44045290 tgacgtggcagtgattaactgggatgagggacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 44045375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 1695898 - 1695831
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| ||||||    
T  1695898 gccacgtcatcaaattagtgacgtggcagtgattaatttggtcaaaggaccaaattttaaatgattaa 1695831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 10712881 - 10712786
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||||| |||||||| ||| ||| | ||||   | ||||||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  10712881 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggatgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 10712786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 33062208 - 33062141
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  33062208 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 33062141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 41248717 - 41248650
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||| |||||||| ||| | | ||||||||||  |||||||||||||||||    
T  41248717 gccacgtcatcaaattagtgatgtggcagtgattaatttggtcaaaggaccaaattttaaacgattaa 41248650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 15604624 - 15604706
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||| |||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  15604624 atgacggggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 15604706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2318430 - 2318487
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaa 227  Q
    ||||||||||||||||||| |||||||| ||| | | ||||||| |||||||||||||    
T  2318430 cacgtcatcaaattaatgatgtggcagtgattaagttggtcaaaagatgaaattttaa 2318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 36382439 - 36382500
Alignment:
Q  210 caaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| ||||||||||| |||||| || ||||||  ||||||||| ||||||||||||||    
T  36382439 caaaggacgaaattttaaatgattaacgattgcaagactagtttgcatggattagcgaatac 36382500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 37895619 - 37895716
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||  ||  |||| |||||||||||    
T  37895619 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagtgtaaattgccaggattagcga 37895716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 15848246 - 15848147
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  || | |||||||||||    
T  15848246 gccacatcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattaccaggattagcga 15848147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 44714033 - 44714128
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||| |||| ||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||    
T  44714033 cacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagc 44714128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 8710753 - 8710835
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||  | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  8710753 atgacgtggcagtgataaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 8710835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 267
Target Start/End: Complemental strand, 15604456 - 15604398
Alignment:
Q  209 tcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  15604456 tcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 15604398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 25230243 - 25230157
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||| ||| ||||||   | ||| ||||||||||| |||||   | ||||||| ||||||||||||||||||||||||    
T  25230243 atgatgtggcagtaattaactgggctcagggacgaaattttaaatgattagtaattgcaaggctagtttgcaaggattagcgaatac 25230157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 41587375 - 41587297
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||| |||| ||| | | ||| |||||||||||||||||| ||||||| ||||||||| || ||| | |||||||    
T  41587375 atgacgtgacagtgattaagttggttaaaggatgaaattttaaatgattaaacaatgcaagggtaattttccaggatta 41587297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 2318314 - 2318217
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||| | ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  2318314 cacgtcatcaaattagtgacgtggcattaattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcga 2318217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 11830505 - 11830444
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||| ||||| |  |||||| || ||||||||||| ||||||| |||||||||    
T  11830505 atgacgtggcagtgattgagtttgtcaaatgacgaaattttaaatgattaaacaatgcaagg 11830444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 44044222 - 44044169
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||| || | |||||||||||| |||||||||| ||||||    
T  44044222 gaaattttaaatgattaatgattacaaggttagttttcaaggattagtgaatac 44044169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 243
Target Start/End: Original strand, 6306992 - 6307063
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaagga--tgaaattttaaacgattaaagaatgca 243  Q
    |||| |||||||||||||||||||| || |||  |||||||||   ||||||||||| ||||||| ||||||    
T  6306992 tcattaaattaatgacgtggcagtccttaactaagtcaaaggacgagaaattttaaatgattaaataatgca 6307063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Complemental strand, 8342306 - 8342250
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  8342306 ggtcaaaggacgaaattttaaatgattaaacaatgcaaggataaattgccaggatta 8342250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 22051152 - 22051092
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaa 228  Q
    ||||| ||||| ||||| |||||||||||| ||| | | |||||||||| |||||||||||    
T  22051152 gccacatcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaa 22051092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 28226051 - 28226111
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| | ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  28226051 ggtcaaagtacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 28226111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 36479874 - 36479798
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||||| |||| ||||||| ||| | ||||   | ||| ||||||||||| ||||||| |||||||||    
T  36479874 cacgtcatcaaattagtgacatggcagtgattaagtggggagatggacgaaattttaaatgattaaacaatgcaagg 36479798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 41588343 - 41588399
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatg 241  Q
    ||||| ||||||| ||| | | |||||||||||||||||||||| ||||||| ||||    
T  41588343 atgacttggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatg 41588399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 236
Target Start/End: Original strand, 30642371 - 30642484
Alignment:
Q  123 aggggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaat 222  Q
    ||||| |||| |||||||| |||||||||||| ||||||| || || |||||||||||||||||||||||||||||||| | |||||||| ||| |||||    
T  30642371 aggggcaaaaatgtcatttcacgtgtgggttggccaattaacaaagtcacgtcatcaaattaatgacgtggcagtcattaagtgggtcaagggacgaaat 30642470  T
Q  223 tttaaacgattaaa 236  Q
    |||||| |||||||    
T  30642471 tttaaatgattaaa 30642484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 174 - 263
Target Start/End: Original strand, 39539194 - 39539283
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| || |||||||| ||||    
T  39539194 tcatcaaattaatgatgtggcagtcattaactgggtcaaaggacgaaattttaaatgattaaagaatgcaaggctaatttgcaagaatta 39539283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 7452073 - 7452176
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  7452073 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 7452172  T
Q  268 atac 271  Q
    ||||    
T  7452173 atac 7452176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 17356083 - 17355980
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||| || ||||||||||| |||||| |||||||||  |||||||||| |||||||||    
T  17356083 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgaatgcaagactagtttgcaaagattagcga 17355984  T
Q  268 atac 271  Q
    ||||    
T  17355983 atac 17355980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 34765538 - 34765435
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| |||| ||| | | | |||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  34765538 gccacgtcatcaaattagtgacgtgacagtgattaagttgatcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 34765439  T
Q  268 atac 271  Q
    ||||    
T  34765438 atac 34765435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 35028156 - 35028053
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||||| || ||| | | ||||||| || ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  35028156 gccacgtcatcaaattagtgacgtggcggtgattaagttggtcaaaagacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 35028057  T
Q  268 atac 271  Q
    ||||    
T  35028056 atac 35028053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 44967227 - 44967124
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||| ||||||||||||    
T  44967227 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgtaaggattagcga 44967128  T
Q  268 atac 271  Q
    ||||    
T  44967127 atac 44967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 271
Target Start/End: Original strand, 13058258 - 13058355
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  13058258 tcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 13058355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 49879365 - 49879268
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||| ||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||    
T  49879365 gccacgtcatcaaattagtgacatggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagc 49879268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 263
Target Start/End: Complemental strand, 50418824 - 50418731
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||    
T  50418824 cacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 50418731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 18831590 - 18831690
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||||||| | ||||||||| || ||| | | ||||||| |||||||||||||| |||||| || |||||||||||||||||| ||||||||||||    
T  18831590 acgtcatcaaataagtgacgtggcggtgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaaggttagtttgcaatgattagcgaata 18831689  T
Q  271 c 271  Q
    |    
T  18831690 c 18831690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 46661184 - 46661280
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattag 264  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||| ||||||||    
T  46661184 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcgaggattag 46661280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 10780849 - 10780770
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    |||||||||||| |  ||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  10780849 gtggcagtcattaatcgggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaat 10780770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 10974458 - 10974379
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    |||||||||||| |  ||||||||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  10974458 gtggcagtcattaatcgggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaat 10974379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 36009002 - 36008899
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||| ||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| |||||||||| |||||||||    
T  36009002 gccacgtcatcaaattagtgacgtggtagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaatgattagcga 36008903  T
Q  268 atac 271  Q
    ||||    
T  36008902 atac 36008899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 43155687 - 43155584
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||||||| |||||||||||| ||| | | ||||||| ||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  43155687 gccacatcatcaaattagtgacgtggcagtgattaagttggtcaaatgactaaattttaaatgattaacgattgcaaggctagtttgcaaggattagcga 43155588  T
Q  268 atac 271  Q
    ||||    
T  43155587 atac 43155584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 51692789 - 51692892
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||| || |||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  51692789 gccacgtcatcgaattagtgacatgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 51692888  T
Q  268 atac 271  Q
    ||||    
T  51692889 atac 51692892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 24349832 - 24349729
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| |||||| |||| |||||||||||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  24349832 gccacctcatcagattagtgacgtggcagtgattaactggggagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 24349733  T
Q  268 atac 271  Q
    ||||    
T  24349732 atac 24349729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 24711350 - 24711445
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||| |||||||||||| |||||||||||| ||| | | ||||||| || ||||||||||| |||||| || ||||||| ||||||||||||||||    
T  24711350 gccatgtcatcaaattagtgacgtggcagtgattaaattggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 24711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 37248475 - 37248574
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||| | ||| | | |||||||||| ||||||| ||| |||||| || ||||||  ||||||||||||||||||||    
T  37248475 gccacgtcatcaaattagtgacgtggcaatgattaaattggtcaaaggacgaaatttaaaatgattaatgattgcaagactagtttgcaaggattagcga 37248574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 37976311 - 37976208
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||| | ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||| |||||||||    
T  37976311 gccacgtcatcgaattagtgacgtggcaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaagattagcga 37976212  T
Q  268 atac 271  Q
    ||||    
T  37976211 atac 37976208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 54713770 - 54713684
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||||| | ||| || ||||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  54713770 atgacatggcaatgattaacagggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 54713684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 1179092 - 1179173
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | ||| |||||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  1179092 gtggcagtgattaagttggttaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 1179173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 24350724 - 24350803
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    |||||||||||| |  ||||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||||||||||    
T  24350724 gtggcagtcattaatcgggtcaaaggacgaaattttaaatgattaatgattgcaaagctagtttgcaaggattagcgaat 24350803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 52909523 - 52909626
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||| ||||  ||||||| |||| ||| | | |||||||||| |||||||||||  ||||| || ||||||| ||||||||||||||||||||    
T  52909523 gccacatcatcgaatttgtgacgtgacagtgattaagttggtcaaaggacgaaattttaaataattaatgattgcaaggctagtttgcaaggattagcga 52909622  T
Q  268 atac 271  Q
    ||||    
T  52909623 atac 52909626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 35028268 - 35028368
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   |  || ||||||||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  35028268 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagtgacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcga 35028367  T
Q  268 a 268  Q
    |    
T  35028368 a 35028368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 10781754 - 10781857
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| |||||| |||| ||||||| ||||  || ||||||   | ||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  10781754 gccacctcatcagattagtgacgtgacagtggttaactggggagagggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 10781853  T
Q  268 atac 271  Q
    ||||    
T  10781854 atac 10781857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 14802006 - 14802108
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||||||| ||| |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||| || ||||||||    
T  14802006 gccacgtca-caaattagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcga 14802104  T
Q  268 atac 271  Q
    ||||    
T  14802105 atac 14802108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 15507831 - 15507729
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| || | ||| | | |||||||||| ||||||| ||| || ||| || |||| |  ||||||||||||||||||||    
T  15507831 gccacgtcatcaaattagtgacgtgacaatgattaagttggtcaaaggacgaaatttgaaatgaataatgattgcacgactagtttgcaaggattagcga 15507732  T
Q  268 ata 270  Q
    |||    
T  15507731 ata 15507729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 27069051 - 27068969
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  27069051 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 27068969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 55867401 - 55867479
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| ||||||   | ||| ||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  55867401 atgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgcaaggatta 55867479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 8439496 - 8439589
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||| ||||||||| || ||| | |||||||| ||| ||||||||||| |||||| |  ||||||| || ||||| |||||||    
T  8439496 cacgtcatcaaattactgacgtggcggtgattaagtgggtcaagggacgaaattttaaatgattaatgtttgcaaggataatttgctaggatta 8439589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 23613550 - 23613651
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||||||| ||| ||| | | |||||||| |  |||||||||| |||||  || ||||||  || |||||||||||||||||||    
T  23613550 cacgtcatcaaattagtgacgtggtagtgattaagttggtcaaagaactaaattttaaatgattagtgattgcaagactaatttgcaaggattagcgaat 23613649  T
Q  270 ac 271  Q
    ||    
T  23613650 ac 23613651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 42738189 - 42738108
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggtta 249  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||  | ||||||||||    
T  42738189 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaacaattgcaaggtta 42738108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 53129662 - 53129561
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| ||| || ||||| ||| | | |||||||| | ||||||||||| |||||| || ||||||  ||||||| |||||||||| |||    
T  53129662 cacgtcatcaaattagtgaagttgcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcaaat 53129563  T
Q  270 ac 271  Q
    ||    
T  53129562 ac 53129561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 34837232 - 34837165
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  34837232 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 34837165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 38012409 - 38012476
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||| ||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||||||||||    
T  38012409 gccacatcatcaaattagtgacgtggcagtgattaatttggtcaaaggaccaaattttaaacgattaa 38012476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 269
Target Start/End: Original strand, 5369176 - 5369238
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||  |||||||||| |||||| || ||||||| |||||||||||||||| |||||    
T  5369176 ggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaat 5369238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 10408174 - 10408256
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  10408174 atgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 10408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 11108147 - 11108213
Alignment:
Q  205 tgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||| ||| |||||||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  11108147 tgggtaaaaagataaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatac 11108213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 32062779 - 32062679
Alignment:
Q  134 tgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgatt 233  Q
    |||||||| |||||||||||| ||||||| ||||| |||| ||||||||||| | | || |||||||| |  ||||| ||||| ||||||||||| ||||    
T  32062779 tgtcatttcacgtgtgggttggccaattaacagag-cacgccatcaaattaacggcatgacagtcattaagcgggtc-aaggacgaaattttaaatgatt 32062682  T
Q  234 aaa 236  Q
    |||    
T  32062681 aaa 32062679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 50751028 - 50750946
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| | |||||  |  || ||| ||||||| ||||||| |||||||||||| ||||| |||||||||||    
T  50751028 atgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcga 50750946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 54858701 - 54858619
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  54858701 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 54858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 11448049 - 11448098
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||||| ||||||||| || |||||||||||||||||    
T  11448049 gaaattttaaatgattaaacaatgcaagggtaatttgcaaggattagcga 11448098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 53129778 - 53129875
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| ||| |||||||| ||| | ||||   | ||| ||||||||||||||| ||| ||||| ||| ||  ||||||||||||||||    
T  53129778 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaacgatgaaacaatgcgagggtaaattgcaaggattagcga 53129875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 53701969 - 53701892
Alignment:
Q  169 ccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| |||||||||    
T  53701969 ccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggaagaaattttaaatgattaaacaatgcaagg 53701892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 53702082 - 53702159
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaag 245  Q
    ||||||||||||||||| |||||||||| | ||| | | ||||||| || ||||||||||| |||||| || ||||||    
T  53702082 gccacgtcatcaaattagtgacgtggcattgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaag 53702159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 231 - 271
Target Start/End: Original strand, 24411681 - 24411721
Alignment:
Q  231 attaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  24411681 attaatgattgcaaggttagtttgcaaggattagcgaatac 24411721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 5818082 - 5818121
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||||||||||||||||||| ||||||| |||||||||    
T  5818082 ggtcaaaggatgaaattttaaatgattaaacaatgcaagg 5818121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 9144924 - 9144857
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||    
T  9144924 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaatgattaa 9144857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 14801894 - 14801795
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||| ||||| ||  |||  |||||||||||    
T  14801894 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcga 14801795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 22567038 - 22567105
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||    
T  22567038 gccacgtcatcaaattattgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaa 22567105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 32950381 - 32950448
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||| |||||||| ||| | | |||| |||||  |||||||||||||||||    
T  32950381 gccacgtcatcaaattagtgatgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 32950448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 34765650 - 34765749
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| |||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||| | ||  |||| |||||||||||    
T  34765650 gccacgtcctcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcga 34765749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 27149303 - 27149361
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||    
T  27149303 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagc 27149361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 52573369 - 52573287
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| |||| |||  ||  |||| |||||||||||    
T  52573369 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgtaagagtaaattgccaggattagcga 52573287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Complemental strand, 54086848 - 54086750
Alignment:
Q  173 gtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||| ||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || | ||||  ||| ||  ||||||||||||||||    
T  54086848 gtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattacaagactagctttgaaggattagcgaatac 54086750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 148042 - 148127
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||| |||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||  |||||||||||||||| ||||||    
T  148042 atgacgtgacagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattaacgaata 148127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 9400677 - 9400580
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| ||||||| |||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  9400677 gccacgtcatcaaattagtgacgtgacagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 9400580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 27891725 - 27891664
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||||| |||| ||| | | |||||||||| ||||||||||| ||||||| |||||||||    
T  27891725 atgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagg 27891664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 39538188 - 39538135
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| ||||||||||||||||  || ||| |||| ||||||||||||    
T  39538188 gaaattttaaatgattaaagaatgcaagactaattttcaagaattagcgaatac 39538135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 50418957 - 50419006
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||||| ||||||||| ||| |||| |||||||||||    
T  50418957 gaaattttaaatgattaaacaatgcaagggtagattgccaggattagcga 50419006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 50503966 - 50503905
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||| ||| | | |||||||||| | ||||||||| ||||||| |||||||||    
T  50503966 atgacgtggcagtgattaagttggtcaaaggacggaattttaaatgattaaacaatgcaagg 50503905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 51859548 - 51859487
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||| |||||||| ||| | | |||||||||| ||||||||||| ||||||| |||||||||    
T  51859548 atgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaataatgcaagg 51859487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 147426 - 147374
Alignment:
Q  219 aaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||  ||||| || ||||||  ||||||||||||||||||||||||    
T  147426 aaattttaaattattaatgattgcaagactagtttgcaaggattagcgaatac 147374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 3032701 - 3032641
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  3032701 ggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 3032641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 45463192 - 45463132
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  45463192 ggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 45463132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 54858867 - 54858923
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  54858867 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 54858923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 6367832 - 6367935
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  6367832 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 6367931  T
Q  268 atac 271  Q
    ||||    
T  6367932 atac 6367935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 183379 - 183276
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  183379 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 183280  T
Q  268 atac 271  Q
    ||||    
T  183279 atac 183276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 32917530 - 32917633
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||| | ||| | | |||||||||||||||||||||| |||||| || ||||||| |||||||||||||||| |||    
T  32917530 gccacgtcatcaaattagtgacgtggcaatgattaagttggtcaaaggatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacga 32917629  T
Q  268 atac 271  Q
    ||||    
T  32917630 atac 32917633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 49722996 - 49723099
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| ||||||||| |||||||||||| ||| | | |||||||||||||||||||||| |||||| || || |||| ||||||||||||||||||||    
T  49722996 gccacgttatcaaattagtgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaatgattgaaaggctagtttgcaaggattagcga 49723095  T
Q  268 atac 271  Q
    ||||    
T  49723096 atac 49723099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 30711600 - 30711700
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||||||||| |||||||||||| ||| | | ||||||| || ||||||||||| |||||| || ||||||| |||||||||||||||||||||||    
T  30711600 acgtcatcaaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaata 30711699  T
Q  271 c 271  Q
    |    
T  30711700 c 30711700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 40210528 - 40210425
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| ||||||||||||||| ||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  40210528 gccatgtcatcaaattaatgtcgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagtctagtttgcaaggattagcga 40210429  T
Q  268 atac 271  Q
    ||||    
T  40210428 atac 40210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 1841731 - 1841831
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||||||||||    
T  1841731 cacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaa-gctagtttgcaaggattagcgaat 1841829  T
Q  270 ac 271  Q
    ||    
T  1841830 ac 1841831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 26024664 - 26024761
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  26024664 cacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 26024761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 1103731 - 1103834
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||||||| |||||||||||| | | | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||    
T  1103731 gccacatcatcaaattagtgacgtggcagtgaataagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcga 1103830  T
Q  268 atac 271  Q
    ||||    
T  1103831 atac 1103834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 7821224 - 7821327
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||||| |||| ||| | | |||||||||| |||||| |||| |||||| || |||| || ||||||||||||||||||||    
T  7821224 gccacgtcatcaaattagtgacgtgacagtgattaagttggtcaaaggacgaaattataaatgattaatgattgcacggctagtttgcaaggattagcga 7821323  T
Q  268 atac 271  Q
    ||||    
T  7821324 atac 7821327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 41099003 - 41099106
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| || |||| ||| | | ||||||| || ||||||||||| |||||| || || |||||||||||||||||||||||||    
T  41099003 gccacgtcatcaaattagtgacatgacagtgattaagttggtcaaatgacgaaattttaaatgattaatgattgtaaggttagtttgcaaggattagcga 41099102  T
Q  268 atac 271  Q
    ||||    
T  41099103 atac 41099106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 43759092 - 43759195
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||| ||| ||||  || | | |||||||||| ||||||||||| |||| |||| ||||||| ||||||||||||||||||||    
T  43759092 gccacgtcatcaaattagtgatgtgacagtggttaagttggtcaaaggacgaaattttaaatgattgaagattgcaaggctagtttgcaaggattagcga 43759191  T
Q  268 atac 271  Q
    ||||    
T  43759192 atac 43759195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 47999281 - 47999178
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||  |||||||||| | ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  47999281 gccacgtcatcaaattggtgacgtggcaataattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 47999182  T
Q  268 atac 271  Q
    ||||    
T  47999181 atac 47999178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 48779389 - 48779492
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||||||||||||| |    
T  48779389 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcaa 48779488  T
Q  268 atac 271  Q
    ||||    
T  48779489 atac 48779492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 13914224 - 13914123
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||||||| ||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  || |||||||||||||||||||    
T  13914224 cacgtcatcaaattagtgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaat 13914125  T
Q  270 ac 271  Q
    ||    
T  13914124 ac 13914123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 4960698 - 4960595
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  4960698 gccacgtcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcga 4960599  T
Q  268 atac 271  Q
    ||||    
T  4960598 atac 4960595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 7821112 - 7821013
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| |||   | |||||||||| ||||||||||| ||||||| ||||||||| ||  ||| ||||||||||||    
T  7821112 gccacgtcatcaaattagtgacgtggcagtgattacgttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtaaggattagcga 7821013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 19017787 - 19017684
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||| | | ||||||||||| |||||| || ||||||  ||||||| ||||||||||||    
T  19017787 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaacgaacgaaattttaaatgattaatgattgcaagactagtttgtaaggattagcga 19017688  T
Q  268 atac 271  Q
    ||||    
T  19017687 atac 19017684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 37578350 - 37578247
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| | ||||| ||| | | |||||||| | ||||||||||| |||||| || || |||| ||||||||||||||||||||    
T  37578350 gccacgtcatcaaattagtgacatagcagtgattaagttggtcaaagaacgaaattttaaatgattaatgattggaaggctagtttgcaaggattagcga 37578251  T
Q  268 atac 271  Q
    ||||    
T  37578250 atac 37578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 19323048 - 19322947
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||| ||| ||| ||| | | |||||||| | ||| ||||||| |||||| || ||||| ||||||||||||||||||||||||    
T  19323048 cacgtcatcaaattagtgacatggtagtgattaagttggtcaaagaacgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaat 19322949  T
Q  270 ac 271  Q
    ||    
T  19322948 ac 19322947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 19323164 - 19323265
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||| ||| ||| ||| | | |||||||| | ||| ||||||| |||||| || ||||| ||||||||||||||||||||||||    
T  19323164 cacgtcatcaaattagtgacatggtagtgattaagttggtcaaagaacgaacttttaaatgattaatgattgcaaagttagtttgcaaggattagcgaat 19323263  T
Q  270 ac 271  Q
    ||    
T  19323264 ac 19323265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 170 - 270
Target Start/End: Complemental strand, 23209517 - 23209417
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| |||||||||||| ||| | | |||||||| |  |||||||||| |||||| || ||||||| |||||||||||||||| |||||    
T  23209517 cacgtcatcgaattagtgacgtggcagtgattaagttggtcaaagaacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattaacgaat 23209418  T
Q  270 a 270  Q
    |    
T  23209417 a 23209417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 271
Target Start/End: Complemental strand, 17662004 - 17661906
Alignment:
Q  172 cgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| ||||| |||||||||| | ||| | | |||||||||| ||||||||||| |||||| || ||||| | ||||||||||||||||||||||||    
T  17662004 cgtcatcgaattagtgacgtggca-tgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatac 17661906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 209 - 271
Target Start/End: Original strand, 4960820 - 4960882
Alignment:
Q  209 tcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  4960820 tcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 4960882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 24009694 - 24009630
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||||||||||||||| |||||| || ||||||| ||||| ||||||||||| ||||||    
T  24009694 ggtcaaaggatgaaattttaaatgattaatgattgcaaggctagttggcaaggattagtgaatac 24009630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 36694437 - 36694337
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||| ||||| |||| || |||| ||| | | |||||||||  ||||||||||| |||||| || ||||||  |||||||||||||||||||||||    
T  36694437 acgtcatcgaattagtgacttgacagtgattaagttggtcaaagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaata 36694338  T
Q  271 c 271  Q
    |    
T  36694337 c 36694337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 36710538 - 36710438
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||| ||||| |||| || |||| ||| | | |||||||||  ||||||||||| |||||| || ||||||  |||||||||||||||||||||||    
T  36710538 acgtcatcgaattagtgacttgacagtgattaagttggtcaaagggcgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaata 36710439  T
Q  271 c 271  Q
    |    
T  36710438 c 36710438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 6367718 - 6367621
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  6367718 cacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 6367621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 24905325 - 24905228
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  ||||||||||||||    
T  24905325 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgcaaggattagc 24905228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 4716626 - 4716559
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  4716626 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 4716559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 14879241 - 14879308
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| ||||||    
T  14879241 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaa 14879308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 30711485 - 30711386
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| |||||||| |||| ||||||| ||| | |||| | | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  30711485 gccacgtcgtcaaattagtgacatggcagtgattaagtggggcgagggacgaaattttaaatgattaaacaatgcaaggataaattgctaggattagcga 30711386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 31514476 - 31514409
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  31514476 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 31514409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 33442752 - 33442685
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  33442752 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 33442685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 34464607 - 34464508
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | ||||||| || ||||||||||| ||||||| | ||||||| ||  |||| | |||||||||    
T  34464607 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacattgcaagggtaaattgccaagattagcga 34464508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 34850335 - 34850438
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | |||||||||||| ||| | ||||   | ||||||||||||||| |||||||   ||||||| || |||||||||||||||||    
T  34850335 gccacgtcagctaatcagtgacgtggcagtgattaagtggggagagggatgaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcga 34850434  T
Q  268 atac 271  Q
    ||||    
T  34850435 atac 34850438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 52134307 - 52134374
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  52134307 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 52134374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 5734998 - 5735084
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| |||| ||| ||||||   | ||| ||||||||||| |||||| || || |||| ||||||||||||||||||||||||    
T  5734998 atgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgtaaggctagtttgcaaggattagcgaatac 5735084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 45750127 - 45750209
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | ||||||| |||||||||||||| ||||||| ||||||||  ||  |||| |||||||||||    
T  45750127 atgacgtggcagtgattaagttggtcaaatgatgaaattttaaatgattaaacaatgcaagagtaaattgctaggattagcga 45750209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 46899887 - 46899973
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| |||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||| ||||||||||| ||||||||||||    
T  46899887 atgacgtgacagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatac 46899973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 13914339 - 13914436
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||| ||||| ||  |||| |||||||||||    
T  13914339 cacgtcatcaaattagtgacgtggcagtgatttagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgccaggattagcga 13914436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 20760812 - 20760872
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  20760812 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 20760872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 17662120 - 17662215
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||| ||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  17662120 gccacttcatcaaattagtgacgtggcagtgattaagtgggaagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 17662215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 24009811 - 24009910
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||| |||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||| ||||    
T  24009811 gccacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattggcga 24009910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 35038596 - 35038545
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaa 236  Q
    ||||||||||||| ||||| | |||||||||| ||||||||||| |||||||    
T  35038596 atgacgtggcagtgattgagttggtcaaaggacgaaattttaaatgattaaa 35038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 40210640 - 40210739
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  40210640 gccacgtcatcaatttagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccagaattagcga 40210739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 28324945 - 28324863
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  28324945 atgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaataatgcaagggtaaattgtcaggattagcga 28324863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 35152613 - 35152691
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||| ||||| ||| ||| |||| ||| | | |||||||||| ||||||||||| |||||| || |||||||    
T  35152613 gccacgtcatcgaattagtgatgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagg 35152691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 40714585 - 40714507
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  40714585 atgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 40714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 46899202 - 46899116
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||| ||| ||||||   | ||| ||||||||||| |||||| || ||||| | ||||||||||| ||||||||||||    
T  46899202 atgatgtggcagtaattaactgggctcagggacgaaattttaaatgattaatgattgcaaagctagtttgcaagaattagcgaatac 46899116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 49955488 - 49955406
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||| ||| | | ||||||||||  |||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  49955488 atgatgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 49955406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 7371431 - 7371370
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||| ||| | | |||||||||| |||||||||||  |||||| |||||||||    
T  7371431 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaataattaaacaatgcaagg 7371370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Complemental strand, 17691327 - 17691278
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||||| ||||||||  || |||||||||||||||||    
T  17691327 gaaattttaaatgattaaacaatgcaagactaatttgcaaggattagcga 17691278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 267
Target Start/End: Original strand, 17692505 - 17692554
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||||| ||||||| | || |||||||||||||||||    
T  17692505 gaaattttaaatgattaaacaatgcaaagctaatttgcaaggattagcga 17692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 19017901 - 19018002
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| ||| | |||||| ||| | ||||   | |||  |||||||||| ||||||| ||||||||| ||  |||| |||||||||||||    
T  19017901 cacgtcatcaaattagtgatgcggcagtgattaagtgggaagagggacaaaattttaaatgattaaataatgcaagggtaaattgccaggattagcgaat 19018000  T
Q  270 ac 271  Q
    ||    
T  19018001 ac 19018002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 28011607 - 28011704
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| ||||||| |||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  28011607 gccacgtcatcaaattagtgacgtgacagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 28011704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 34849119 - 34849066
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||   ||||||| || |||||||||||||||||||||    
T  34849119 gaaattttaaatgattaaattttgcaagggtaatttgcaaggattagcgaatac 34849066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 267
Target Start/End: Complemental strand, 5734116 - 5734068
Alignment:
Q  219 aaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||| ||||||||  || |||||||||||||||||    
T  5734116 aaattttaaatgattaaacaatgcaagactaatttgcaaggattagcga 5734068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 12905966 - 12906026
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  12905966 ggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 12906026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 17189073 - 17189013
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  17189073 ggtcaaatgacgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcga 17189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 31051069 - 31051009
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||| | ||  |||| |||||||||||    
T  31051069 ggtcaaaggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcga 31051009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 35040921 - 35040981
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  35040921 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 35040981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 40714750 - 40714810
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||| | ||  |||| |||||||||||    
T  40714750 ggtcaaaggacgaaattttaaatgattaaacaatgcaaaggtaaattgccaggattagcga 40714810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 48691255 - 48691203
Alignment:
Q  219 aaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||| ||| || || ||||||||||||||||||| |||| |||||||    
T  48691255 aaattttaaatgatcaatgattgcaaggttagtttgcaagaattaacgaatac 48691203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 49955654 - 49955710
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  49955654 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 49955710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 7e-27; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 17885780 - 17885683
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||| ||||||    
T  17885780 tcatcaaattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagagaatac 17885683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 27991978 - 27992081
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  27991978 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 27992077  T
Q  268 atac 271  Q
    ||||    
T  27992078 atac 27992081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 13386017 - 13386119
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| |||||| |||| |||| ||||||| ||| ||||||||||||||| |||||||||| ||||||| | ||||||| ||||||||||||||||||||    
T  13386017 gccacctcatcagattagtgacatggcagtgattaactgggtcaaaggataaaattttaaatgattaaacattgcaaggctagtttgcaaggattagcga 13386116  T
Q  268 ata 270  Q
    |||    
T  13386117 ata 13386119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 12229299 - 12229410
Alignment:
Q  125 gggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattt 224  Q
    |||||||| | |||||| |||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||| | ||||| || ||| |||||||    
T  12229299 gggtaaaactatcatttcacgtatgggttgaccagttaacaaagccacgtcatcaaattaatgacgtggcagtcattaagtgggttaagggacgaaattt 12229398  T
Q  225 taaacgattaaa 236  Q
    | || |||||||    
T  12229399 ttaatgattaaa 12229410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 2640336 - 2640233
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  || |||||||||||||||||    
T  2640336 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcga 2640237  T
Q  268 atac 271  Q
    ||||    
T  2640236 atac 2640233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 3914408 - 3914511
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||| ||||| |||| ||||||| ||| | | ||||||| |||||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  3914408 gccatgtcatcgaattagtgacatggcagtgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 3914507  T
Q  268 atac 271  Q
    ||||    
T  3914508 atac 3914511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 17102259 - 17102362
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| |||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| |||||||| |||||||||||    
T  17102259 gccacgtcataaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaaggctagtttgctaggattagcga 17102358  T
Q  268 atac 271  Q
    ||||    
T  17102359 atac 17102362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 19204728 - 19204827
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||| ||||||||||||||  ||||| || ||||| | ||||||||||||||||||||    
T  19204728 gccacgtcatcaaattagtgacgtggcagtgattaaattggtcaaatgatgaaattttaaataattaatgattgcaaagctagtttgcaaggattagcga 19204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 263
Target Start/End: Complemental strand, 32053301 - 32053206
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||||| ||| |||||||| ||| | | ||||||| |||||||||||||| |||||| || ||||||| ||||||||||||||||    
T  32053301 gccacgtcatcaaattagtgatgtggcagtgattaagttggtcaaaagatgaaattttaaatgattaatgattgcaaggctagtttgcaaggatta 32053206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 48788961 - 48788858
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| ||||||| || | ||| | | ||||||| |||||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  48788961 gccacgtcatcgaattagtgacgtgacactgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 48788862  T
Q  268 atac 271  Q
    ||||    
T  48788861 atac 48788858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 33809374 - 33809472
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcg 266  Q
    ||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||  ||||||||||| |||  || |||||||  |||||||    
T  33809374 gccacatcatcaaattaatgacgtgtcagtcattaactggatcaaaggatgaaattttaaataattaaagaatgtaagactaatttgcaaaaattagcg 33809472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 22871466 - 22871367
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| ||||||  | ||||||  | ||||||||||||||||||    
T  22871466 gccacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaataattgcaagactggtttgcaaggattagcga 22871367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 28469167 - 28469066
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| ||||| |||| | ||| | | |||||||||| ||||||||||| |||||| || ||||||| |||||||||| |||||||||    
T  28469167 gccacgtcatcaaattagtgacg-ggcaatgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaagattagcga 28469069  T
Q  268 ata 270  Q
    |||    
T  28469068 ata 28469066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 33808464 - 33808378
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||| |||||  ||| |||||||||| ||| ||||||||||| ||||||||||||||||  || |||||||||||||||||||||    
T  33808464 atgacggggcagcgattaactgggtcaatggacgaaattttaaatgattaaagaatgcaagactaatttgcaaggattagcgaatac 33808378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 271
Target Start/End: Complemental strand, 42362573 - 42362505
Alignment:
Q  203 actgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||| || ||||||||||||| |||||||    
T  42362573 actgggttaaaggacgaaattttaaatgattaaagaatgcaagggtaatttgcaaggattaacgaatac 42362505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 6253715 - 6253813
Alignment:
Q  173 gtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||||| ||||||| |||| ||| | | ||||||||||  |||||||||| |||||| || ||||||  | ||||||||||||||||||||||    
T  6253715 gtcatcaaattagtgacgtgacagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagacttgtttgcaaggattagcgaatac 6253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 10936106 - 10936167
Alignment:
Q  210 caaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  10936106 caaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 10936167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 271
Target Start/End: Complemental strand, 27396765 - 27396684
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | ||||||| |||||||||||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  27396765 gtggcagtgattaagttggtcaaatgatgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatac 27396684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 42019755 - 42019652
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||| ||||| |||||| ||||| ||| | | |||||||| | ||||||||||| |||||| || | ||| | ||||||||||||||||||||    
T  42019755 gccacatcatcgaattagtgacgtagcagtgattaatttggtcaaagaacgaaattttaaatgattaatgattacaaagctagtttgcaaggattagcga 42019656  T
Q  268 atac 271  Q
    ||||    
T  42019655 atac 42019652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 266
Target Start/End: Original strand, 42731689 - 42731787
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcg 266  Q
    ||||||||||  ||||| |||||||||||| ||| | | |||||||||| ||||||||||| ||||||  | ||||| | ||| |||||||||||||||    
T  42731689 gccacgtcattgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaataattgcaaagctagcttgcaaggattagcg 42731787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 43124439 - 43124521
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| ||||||   | ||| ||||||||||| ||||||| ||||||||| ||||||| ||||||||||||    
T  43124439 atgacgtggcagtgattaactgggaatagggacgaaattttaaatgattaaacaatgcaagggtagtttgtaaggattagcga 43124521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 17886778 - 17886863
Alignment:
Q  186 tgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||||| ||| | |||||||| ||| ||||||||||| ||||||    ||||||| |||||||||||||||| |||||||    
T  17886778 tgacgtggcagtgattaagtgggtcaagggacgaaattttaaatgattaatatttgcaagggtagtttgcaaggattaacgaatac 17886863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 24389094 - 24389158
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||  |||||||||| |||||| || ||||| | ||||||||||||||||||||||||    
T  24389094 ggtcaaaggacaaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatac 24389158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 30948318 - 30948251
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  30948318 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 30948251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 34928808 - 34928741
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  34928808 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 34928741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 39686692 - 39686625
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  39686692 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 39686625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 40379927 - 40379824
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||| | ||| | ||||   | ||| ||||||||||| ||||||| ||| ||| | ||  ||||||||||||||||    
T  40379927 gccacgtcatcaaattagtgacgtggcattgattaagtggggagagggacgaaattttaaatgattaaacaatacaaaggtaaattgcaaggattagcga 40379828  T
Q  268 atac 271  Q
    ||||    
T  40379827 atac 40379824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 18087625 - 18087707
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| | ||||| || |||  |||||||||| ||||||  | ||||||| || |||||||||||||||||    
T  18087625 atgacgtggcagtcattaagtgggttaagggacaaaattttaaatgattaataattgcaaggctattttgcaaggattagcga 18087707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 25628619 - 25628541
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  25628619 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 25628541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 37657120 - 37657198
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||||||||||||||  |||||| |||| ||| | | |||||||||| ||||||||||| |||||| || |||||||    
T  37657120 gccacgtcatcaaattagcgacgtgtcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagg 37657198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 42618196 - 42618278
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| |||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  42618196 atgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 42618278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 40380004 - 40380057
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||| || ||||||| ||||||||||||||| ||||||||    
T  40380004 gaaattttaaatgattaatgattgcaaggctagtttgcaaggattggcgaatac 40380057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 45010924 - 45010977
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| ||||||| ||||||||| ||  ||||||||||||||||||||    
T  45010924 gaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcgaatac 45010977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 47945465 - 47945412
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||| || ||||| | ||||||||||||||||||||||||    
T  47945465 gaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatac 47945412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 47950895 - 47950842
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||| || ||||| | ||||||||||||||||||||||||    
T  47950895 gaaattttaaatgattaatgattgcaatgctagtttgcaaggattagcgaatac 47950842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 5457177 - 5457280
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | |||||||||||| ||| ||||||   | ||| ||||||||||| ||||||| | || |||| || ||||||||||||| |||    
T  5457177 gccacgtcagctaatcagtgacgtggcagtgattaactgggatgagggacgaaattttaaatgattaaacattgaaagggtaatttgcaaggattaacga 5457276  T
Q  268 atac 271  Q
    ||||    
T  5457277 atac 5457280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 263
Target Start/End: Original strand, 28469278 - 28469373
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||||| |||||||| ||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  28469278 gccacgtcatcaaattagtgacgtggtagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 28469373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 32680753 - 32680686
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||    
T  32680753 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaa 32680686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 18086430 - 18086352
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||| ||||||| ||| |||||||||| ||| ||||||||||  ||||||  | ||||||| || |||||||||||||    
T  18086430 atgacatggcagtaattaactgggtcaagggacgaaattttaagtgattaataattgcaaggctaatttgcaaggatta 18086352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 32068381 - 32068463
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  32068381 atgacgtggcagtgattaagttggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattggcaggattagcga 32068463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 263
Target Start/End: Original strand, 6571240 - 6571313
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||| ||| | | |||||||||| ||||||||||| ||||||  | ||||||| ||||||||||| ||||    
T  6571240 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaataattgcaaggctagtttgcaagaatta 6571313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 42731575 - 42731478
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| |||| ||||||| ||| | ||||   | ||| ||||||||||| ||||||| |||||| || ||  |||| |||||||||||    
T  42731575 cacgtcatcaaattagtgacatggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaggggtaaattgccaggattagcga 42731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 43266407 - 43266346
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||||| |||| ||| | | ||||||| |||||||||||||| ||||||| |||||||||    
T  43266407 atgacgtgacagtgattaagttggtcaaatgatgaaattttaaatgattaaacaatgcaagg 43266346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 22081866 - 22081926
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  22081866 ggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 22081926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 25453247 - 25453187
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  25453247 ggtcaaaggacgaaattttaaatgattaaataatgcaagggtaaattgtcaggattagcga 25453187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 25453435 - 25453495
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||| ||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  25453435 ggtcaaaggacgaaatgttaaatgattaaacaatgcaagggtaaattgctaggattagcga 25453495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 25628785 - 25628845
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  25628785 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 25628845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 32068215 - 32068155
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| | ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  32068215 ggtcaaagtacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 32068155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 32934467 - 32934407
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  32934467 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 32934407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 46205616 - 46205672
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||||| ||||||||||| ||||||| ||||||||| || ||||  |||||||    
T  46205616 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaatttgtcaggatta 46205672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 174 - 271
Target Start/End: Complemental strand, 11434954 - 11434857
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| ||||||||||| |||||| || ||||||| |||||||||| |||||||||||||    
T  11434954 tcatcaaattagtgacgtggcagtgattaactgggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaacgattagcgaatac 11434857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 21627869 - 21627768
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  21627869 cacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaat 21627770  T
Q  270 ac 271  Q
    ||    
T  21627769 ac 21627768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 33517804 - 33517907
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| || |||||||||||||||||    
T  33517804 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcga 33517903  T
Q  268 atac 271  Q
    ||||    
T  33517904 atac 33517907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 3059528 - 3059629
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||||||||| |||| ||||||| ||| | | ||||||| |||||||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  3059528 cacgtcatcaaattagtgacatggcagtgattaagttggtcaaaagatgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaat 3059627  T
Q  270 ac 271  Q
    ||    
T  3059628 ac 3059629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 17734354 - 17734257
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||    
T  17734354 gccacgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagc 17734257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 30337688 - 30337787
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  30337688 gccatgtcatcaaattagtgacgtggcagtgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 30337787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 30804131 - 30804234
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||| | ||||||||||| ||||||||    
T  30804131 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaacgctagtttgcaagaattagcga 30804230  T
Q  268 atac 271  Q
    ||||    
T  30804231 atac 30804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 171 - 271
Target Start/End: Original strand, 30726032 - 30726132
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    |||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || | ||||| |||||||||||||||||||||||    
T  30726032 acgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgatttcaaggctagtttgcaaggattagcgaata 30726131  T
Q  271 c 271  Q
    |    
T  30726132 c 30726132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 33647221 - 33647324
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||||||  |||||||||||| ||| | |  |||||||||  |||||||||| |||||| || ||||||||||||||||||||||||||||    
T  33647221 gccatgtcatcaaatttgtgacgtggcagtgattaagtttgtcaaaggactaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcga 33647320  T
Q  268 atac 271  Q
    ||||    
T  33647321 atac 33647324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 12080908 - 12081009
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| |||| || |||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||||    
T  12080908 cacgtcatcgaattagtgacatgacagtaattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaat 12081007  T
Q  270 ac 271  Q
    ||    
T  12081008 ac 12081009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 680998 - 681101
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | |||||||||||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  680998 gccacgtcagctaatcagtgacgtggcagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 681097  T
Q  268 atac 271  Q
    ||||    
T  681098 atac 681101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 20651931 - 20652020
Alignment:
Q  182 ttaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||||||||| ||| |||||||  | ||| ||||||||||| |||||| || ||||||| | ||||||||||||||| ||||||    
T  20651931 ttaatgacgtggcagtaattaactgggttcagggacgaaattttaaatgattaacgattgcaaggctggtttgcaaggattagtgaatac 20652020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 680024 - 679921
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| | ||| | ||| |||||||| ||| ||||||   | ||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  680024 gccacgtcagctaatcagtgatgtggcagtaattaactgggctcatggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 679925  T
Q  268 atac 271  Q
    ||||    
T  679924 atac 679921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 28000543 - 28000476
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  28000543 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 28000476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 33517692 - 33517593
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||| ||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  33517692 gccacgtcatcaaattagtgacgtagcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 33517593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Complemental strand, 8089584 - 8089506
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    |||||||| | |||||| | ||||| || ||| ||||||||||| ||||||| ||||||||| || |||||||||||||    
T  8089584 atgacgtgtcggtcattaagtgggttaagggacgaaattttaaatgattaaacaatgcaagggtaatttgcaaggatta 8089506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 20651151 - 20651065
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||||| ||| |||||    | ||| ||||||||||| |||||| || ||||||| | ||||||||||||||||||||||    
T  20651151 atgacgtggcagttattaactggactcatggacgaaattttaaatgattaatgattgcaaggctggtttgcaaggattagcgaatac 20651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 363026 - 362961
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  363026 cacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 362961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 11393096 - 11393177
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | ||||||| || ||||||| ||| |||||| || ||||||  ||||||||||||||||||||||||    
T  11393096 gtggcagtgattaagttggtcaaatgacgaaatttgaaatgattaatgattgcaagtctagtttgcaaggattagcgaatac 11393177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 271
Target Start/End: Original strand, 13379802 - 13379855
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| |||||| || ||||||| ||||||||||| ||||||||||||    
T  13379802 gaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaatac 13379855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 21627983 - 21628082
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | |||  |||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  21627983 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacaaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 21628082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 21836149 - 21836090
Alignment:
Q  208 gtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  21836149 gtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 21836090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 7160945 - 7160863
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||  ||  |||| |||||||||||    
T  7160945 atgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagagtaaattgccaggattagcga 7160863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 21836315 - 21836397
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  21836315 atgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 21836397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 22502915 - 22502833
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  22502915 atgacttggcagttattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 22502833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 22503059 - 22503141
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | ||||||| || |||| |||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  22503059 atgacgtggcagtgattaagttggtcaaatgacgaaaatttaaatgattaaacaatgcaaggataaattgccaggattagcga 22503141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 31407163 - 31407245
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| |||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  31407163 atgacgtgacagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 31407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 12408487 - 12408544
Alignment:
Q  214 ggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||||| |||||||   ||||||| || |||||||||||||||||||||    
T  12408487 ggatcaaattttaaatgattaaactttgcaaggataatttgcaaggattagcgaatac 12408544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 6517621 - 6517581
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggt 247  Q
    |||||||||| ||||||||||| ||||||| ||||||||||    
T  6517621 ggtcaaaggacgaaattttaaatgattaaacaatgcaaggt 6517581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 263
Target Start/End: Complemental strand, 15115510 - 15115402
Alignment:
Q  155 accaattaccagagccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttg 254  Q
    |||||||| || ||||||||||  || || ||||||||| ||| ||| | |||||  |||||  |||||||||| |||||||   ||||||| || ||||    
T  15115510 accaattaacatagccacgtcagtaatttgatgacgtggtagtaattaagtgggtgtaaggactaaattttaaatgattaaactttgcaaggctaatttg 15115411  T
Q  255 caaggatta 263  Q
    |||||||||    
T  15115410 caaggatta 15115402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 23458137 - 23458034
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | |||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||||||||    
T  23458137 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaattattgcaaggctagtttgcaaggattagcga 23458038  T
Q  268 atac 271  Q
    ||||    
T  23458037 atac 23458034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 46475051 - 46475154
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  46475051 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 46475150  T
Q  268 atac 271  Q
    ||||    
T  46475151 atac 46475154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 19741081 - 19740982
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||| | ||| | | |||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  19741081 gccacgtcatcaaattagtgacgtggcaatgattaaattggtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 19740982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 36417958 - 36418061
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | |  ||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  36417958 gccacgtcatcgaattagtgacgtggcagtgattaagtttgtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 36418057  T
Q  268 atac 271  Q
    ||||    
T  36418058 atac 36418061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 42855615 - 42855678
Alignment:
Q  208 gtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  42855615 gtcaaaggatgaaattttaaatgattaaagaatgcaaggctagtttgcaaggattagcgaatac 42855678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 168 - 270
Target Start/End: Original strand, 43384553 - 43384655
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | | |||||||||| ||||||||||| || ||| || ||||||| |||||||||||||||| |||    
T  43384553 gccacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgactaatgattgcaaggctagtttgcaaggattaacga 43384652  T
Q  268 ata 270  Q
    |||    
T  43384653 ata 43384655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 33689537 - 33689436
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || ||||||| ||||||||||| ||||||||||    
T  33689537 cacgtcatcgaattagtgacgtggcagtgattaagttggtcaaaggacaaaattttaaatgattaatgattgcaaggctagtttgcaagaattagcgaat 33689438  T
Q  270 ac 271  Q
    ||    
T  33689437 ac 33689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 170 - 271
Target Start/End: Original strand, 53756995 - 53757096
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaat 269  Q
    ||||||||| ||||| ||||| || ||| ||| | | ||| |||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||    
T  53756995 cacgtcatcgaattagtgacgcggtagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaaggttagtttgcaaggattagcgaat 53757094  T
Q  270 ac 271  Q
    ||    
T  53757095 ac 53757096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 9367899 - 9367796
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||  | ||||||| ||||||||||||||||||||    
T  9367899 gccacctcatcaaattagtgacgtggcagtgattaattgggatgagggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcga 9367800  T
Q  268 atac 271  Q
    ||||    
T  9367799 atac 9367796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 208 - 271
Target Start/End: Complemental strand, 36417806 - 36417743
Alignment:
Q  208 gtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||||||    
T  36417806 gtcaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcgaatac 36417743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 40758402 - 40758483
Alignment:
Q  190 gtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  ||||||||||||||||||||||||    
T  40758402 gtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagactagtttgcaaggattagcgaatac 40758483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 265
Target Start/End: Original strand, 37778558 - 37778638
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||| ||| | | |||||||||||||||||||||| ||||||| ||||||||| ||  |||| |||||||||    
T  37778558 atgacgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagc 37778638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 55052437 - 55052359
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  |||||||||| |||||| || |||||||    
T  55052437 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaggactaaattttaaatgattaatgattgcaagg 55052359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 23458251 - 23458348
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||| ||| |||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  23458251 cacgtcatcaaattagtgatgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgcaaggattagcga 23458348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 33689649 - 33689748
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||| ||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  33689649 gccacgtcatcgaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaataatgcaagggtaaattgccaggattagcga 33689748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 54466662 - 54466729
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  54466662 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaattttaaacgattaa 54466729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 4323489 - 4323571
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| | |||||  |  || ||| ||||||| ||||||| |||||||||||| ||||| |||||||||||    
T  4323489 atgacgtggcagtcattaagtgggttcagtgacgaatttttaaatgattaaacaatgcaaggttaatttgccaggattagcga 4323571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 9294103 - 9294013
Alignment:
Q  181 attaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||||||| ||| | | ||||||| ||  |||||||||| |||||| || |  ||| |||||||||||||||||||||||||    
T  9294103 attagtgacgtggcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattataagattagtttgcaaggattagcgaatac 9294013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 29118823 - 29118905
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||| | ||  |||| |||||||||||    
T  29118823 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaatggtaaattgccaggattagcga 29118905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 40788705 - 40788787
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||  ||  |||| |||||||||||    
T  40788705 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaaagattaaacaatgcaagagtaaattgccaggattagcga 40788787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 41558169 - 41558255
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||| |||||||| ||| ||||||   ||||| ||||||||||| |||||| || ||||||  || |||||||||||||||||||||    
T  41558169 atgatgtggcagtaattaactgggctcaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattagcgaatac 41558255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 47551634 - 47551552
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||| |||||||| ||| | | |||||||||||||||||||||| ||||||| ||||||||| ||  |||| || ||||||||    
T  47551634 atgatgtggcagtgattaagttggtcaaaggatgaaattttaaatgattaaacaatgcaagggtaaattgccagtattagcga 47551552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 52032279 - 52032197
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  52032279 atgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcga 52032197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 36314456 - 36314359
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  36314456 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 36314359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 48322535 - 48322438
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  48322535 gccacgtcatcaaattagtgacgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 48322438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 10307682 - 10307742
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  10307682 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 10307742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 11910818 - 11910758
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  11910818 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcga 11910758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 26463751 - 26463687
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||| ||||||||||| |||||| || ||||||  || ||||||||||||| |||||||    
T  26463751 ggtcaaaggacgaaattttaaatgattaatgattgcaagactaatttgcaaggattaccgaatac 26463687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 185
Target Start/End: Original strand, 44961266 - 44961330
Alignment:
Q  121 ataggggtaaaattgtcatttaacgtgtgggttgaccaattaccagagccacgtcatcaaattaa 185  Q
    ||||||||||||||||||||| |  |||||||||| |||||| | ||||||  ||||||||||||    
T  44961266 ataggggtaaaattgtcattttatatgtgggttgatcaattaacggagccatatcatcaaattaa 44961330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 52032446 - 52032506
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  52032446 ggtcaaaggaagaaattttaaatgattaaacaatgcaagggtatattgccaggattagcga 52032506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 264
Target Start/End: Complemental strand, 3469341 - 3469262
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattag 264  Q
    |||||||||| || ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| ||||||||    
T  3469341 atgacgtggccgtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattag 3469262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 3849145 - 3849086
Alignment:
Q  212 aaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||| ||||||||||| |||||| || |||| || |||||||||||||||| |||||||    
T  3849145 aaggacgaaattttaaatgattaatgattgcagggctagtttgcaaggattaacgaatac 3849086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 8041855 - 8041922
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | | || |||||  |||||||||||||||||    
T  8041855 gccacgtcatcaaattagtgacgtggcagtgattaatttgttccaaggaccaaattttaaacgattaa 8041922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 9294228 - 9294327
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||| || |||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  9294228 gccacgtcatcaaattagtgacatgacagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 9294327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 35643992 - 35643910
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | |  ||||||||| ||||||||||| ||||||| |||||| || ||  |||| |||||||||||    
T  35643992 atgacgtggcagtgattaagtttgtcaaaggacgaaattttaaatgattaaacaatgcacgggtaaattgccaggattagcga 35643910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 265
Target Start/End: Complemental strand, 10770648 - 10770551
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagc 265  Q
    ||||||||||||||||| ||| |||||||| ||| | | |||| |||||  |||||||||| ||||||  | ||||||| ||  |||| |||||||||    
T  10770648 gccacgtcatcaaattagtgatgtggcagtgattaagttggtccaaggaccaaattttaaatgattaacaattgcaaggctaaattgccaggattagc 10770551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 32306565 - 32306504
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    ||||||||| ||| ||| | | |||||||||| ||||||||||| ||||||| |||||||||    
T  32306565 atgacgtggtagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagg 32306504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 41558116 - 41558063
Alignment:
Q  218 gaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    ||||||||||| ||||||  | |||||||||| | |||||||||||||||||||    
T  41558116 gaaattttaaatgattaataattgcaaggttaatgtgcaaggattagcgaatac 41558063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 3469507 - 3469567
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| | ||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  3469507 ggtcaaaggacggaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 3469567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 13948899 - 13948839
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| | |||||||||    
T  13948899 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcga 13948839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Original strand, 32306731 - 32306791
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  32306731 ggtcaaatgacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 32306791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 246
Target Start/End: Complemental strand, 35712183 - 35712111
Alignment:
Q  174 tcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaagg 246  Q
    |||||| |||| |||| || |||| ||| ||||||||||| || ||||||||||| ||||||| | |||||||    
T  35712183 tcatcagattagtgacctgacagtgattaactgggtcaaaagacgaaattttaaatgattaaacattgcaagg 35712111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 42343040 - 42343104
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||| ||||||||||| ||||||  | ||||||  || ||||||| |||||||||||||    
T  42343040 ggtcaaaggacgaaattttaaatgattaatcattgcaagactaatttgcaaagattagcgaatac 42343104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 270
Target Start/End: Complemental strand, 14587 - 14485
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||| ||  |||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  14587 gccacgtcatcaaattagtgacgtggcagtgattaagttggtcaaaagacaaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 14488  T
Q  268 ata 270  Q
    |||    
T  14487 ata 14485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 69235 - 69338
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||||  |||| | |||||||||| ||| | | ||| |||||| ||||||||||| |||||| || ||||||| ||||||||||||||||||||    
T  69235 gccacgtcatcgtattagtaacgtggcagtgattaagttggttaaaggacgaaattttaaatgattaatgattgcaaggctagtttgcaaggattagcga 69334  T
Q  268 atac 271  Q
    ||||    
T  69335 atac 69338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 171 - 264
Target Start/End: Complemental strand, 69120 - 69027
Alignment:
Q  171 acgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattag 264  Q
    |||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||||||||| ||  |||| ||||||||    
T  69120 acgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattag 69027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 139911 - 140014
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | | ||||||||||  ||||||||||  ||||| || ||||||| ||||||||||| ||||| ||    
T  139911 gccacgtcatcaaattagtgacgtggcagttattaagttggtcaaaggactaaattttaaataattaatgattgcaaggctagtttgcaagaattagtga 140010  T
Q  268 atac 271  Q
    ||||    
T  140011 atac 140014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 5103 - 5018
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaata 270  Q
    ||||||||||||  ||| | | |||||||||| ||||||||||| ||||||  | ||||||| |||||||||||||||||||||||    
T  5103 atgacgtggcagcgattaattaggtcaaaggacgaaattttaaatgattaataattgcaaggctagtttgcaaggattagcgaata 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 6265 - 6343
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||||||| | ||||| || | | ||||||||||| ||||||| | ||||||| || |||||||||||||    
T  6265 atgacgtggcagtcattaagtgggttaaggaacgaaattttaaatgattaaacattgcaagggtaatttgcaaggatta 6343  T

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Target: scaffold0707 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 6388 - 6452
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcgaatac 271  Q
    |||||||||| ||||||||||| |||||| || ||||||| || |||||||||||||||||||||    
T  6388 ggtcaaaggacgaaattttaaatgattaatgattgcaaggctactttgcaaggattagcgaatac 6452  T

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Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 37721 - 37619
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||||||| ||| |||||||| ||| | | |||||||||| ||||||||||| |||||| || ||||||  |||||||| || ||||||||    
T  37721 gccacgtca-caaattagtgatgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaatgattgcaagaatagtttgctagaattagcga 37623  T
Q  268 atac 271  Q
    ||||    
T  37622 atac 37619  T

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Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 37833 - 37932
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||||||| |||||||||||| ||| | ||||   | ||| ||||||||||| ||||||| ||| ||||| ||  |||  |||||||||||    
T  37833 gccacgtcatcaaattagtgacgtggcagtgattaagtggggagagggacgaaattttaaatgattaaacaatacaagggtaaattgtcaggattagcga 37932  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 12065 - 12147
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  12065 atgacgtggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcga 12147  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 265
Target Start/End: Original strand, 2008 - 2108
Alignment:
Q  168 gccacgtcatcaaattaatgacgt---ggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattag 264  Q
    ||||||||||||||||| ||||||   |||||| ||| | | |||||||| | ||||||||||| |||||| || ||||||| |||||||||| ||||||    
T  2008 gccacgtcatcaaattagtgacgtcgtggcagtgattaaattggtcaaagaacgaaattttaaatgattaatgattgcaaggatagtttgcaaagattag 2107  T
Q  265 c 265  Q
    |    
T  2108 c 2108  T

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Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 19998 - 19916
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||| |||||||| | | ||| || | | ||||||||||| ||||||||||||||| | || |||||||||||||||||    
T  19998 atgacgtgacagtcattaattaggttaatgaacgaaattttaaatgattaaagaatgcaaaggtaatttgcaaggattagcga 19916  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 235
Target Start/End: Complemental strand, 141750 - 141685
Alignment:
Q  170 cacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||| |||||||||||| ||| | | |||| |||||  |||||||||||||||||    
T  141750 cacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggactaaattttaaacgattaa 141685  T

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Target: scaffold0599 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 2512 - 2452
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  2512 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgctaggattagcga 2452  T

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Target: scaffold0295 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 2413 - 2480
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaa 235  Q
    ||||||||||||||||| ||| |||||||| ||| | | |||||||||  ||||||||||| ||||||    
T  2413 gccacgtcatcaaattagtgatgtggcagtgattaagttggtcaaagggcgaaattttaaatgattaa 2480  T

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Target: scaffold0006 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 267
Target Start/End: Complemental strand, 221908 - 221849
Alignment:
Q  208 gtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||||||| ||||||||||| ||||||| ||||||||| ||  |||| |||||||||||    
T  221908 gtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaggattagcga 221849  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 222074 - 222156
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||  |||||||||||    
T  222074 atgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgtcaggattagcga 222156  T

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Target: scaffold0388 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 12524 - 12602
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| | | |||||||| | ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  12524 atgacgtggcagtgattaagtaggtcaaagaacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 12602  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 11281 - 11199
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    ||||| ||||||| ||| | | |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| | |||||||||    
T  11281 atgacttggcagtgattaagttggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcga 11199  T

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Target: scaffold0328; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 263
Target Start/End: Original strand, 11425 - 11503
Alignment:
Q  185 atgacgtggcagtcattgactgggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggatta 263  Q
    ||||||||||||| ||| | | ||||||| || ||||||||||| ||||||| ||||||||| ||  |||| |||||||    
T  11425 atgacgtggcagtgattaagttggtcaaaagacgaaattttaaatgattaaacaatgcaagggtaaattgccaggatta 11503  T

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Target: scaffold0220 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 197
Target Start/End: Complemental strand, 23406 - 23360
Alignment:
Q  151 gttgaccaattaccagagccacgtcatcaaattaatgacgtggcagt 197  Q
    |||| ||||||| ||||||||||||| ||||||| ||||||||||||    
T  23406 gttggccaattaacagagccacgtcagcaaattactgacgtggcagt 23360  T

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Target: scaffold0771 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 267
Target Start/End: Complemental strand, 1039 - 979
Alignment:
Q  207 ggtcaaaggatgaaattttaaacgattaaagaatgcaaggttagtttgcaaggattagcga 267  Q
    |||||||||| ||||||||||| ||||||| ||||||||| ||  |||| | |||||||||    
T  1039 ggtcaaaggacgaaattttaaatgattaaacaatgcaagggtaaattgccaagattagcga 979  T

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Target: scaffold0559 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0559
Description:

Target: scaffold0559; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 1472 - 1540
Alignment:
Q  168 gccacgtcatcaaattaatgacgtggcagtcattgactgggtcaaaggatgaaa-ttttaaacgattaa 235  Q
    ||||||||||||||||| |||||||||||| ||| | | |||| |||||  ||| ||||||||||||||    
T  1472 gccacgtcatcaaattagtgacgtggcagtgattaatttggtccaaggaccaaatttttaaacgattaa 1540  T

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