View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5006_low_18 (Length: 249)

Name: NF5006_low_18
Description: NF5006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5006_low_18
NF5006_low_18
[»] chr7 (28 HSPs)
chr7 (1-235)||(47065718-47065959)
chr7 (1-235)||(7900494-7900735)
chr7 (1-235)||(26015644-26015885)
chr7 (1-235)||(27325016-27325257)
chr7 (1-235)||(32541961-32542202)
chr7 (1-235)||(43246735-43246976)
chr7 (1-235)||(46321824-46322065)
chr7 (1-235)||(40995248-40995489)
chr7 (1-235)||(46923939-46924179)
chr7 (1-235)||(8215696-8215937)
chr7 (1-235)||(34591737-34591978)
chr7 (1-235)||(40705291-40705531)
chr7 (1-235)||(8203217-8203460)
chr7 (1-235)||(21278845-21279088)
chr7 (4-235)||(40994591-40994829)
chr7 (4-235)||(25876840-25877080)
chr7 (1-193)||(38875874-38876073)
chr7 (1-235)||(47779284-47779528)
chr7 (1-217)||(7790964-7791188)
chr7 (1-190)||(38283414-38283610)
chr7 (1-235)||(32662167-32662387)
chr7 (146-235)||(35924318-35924407)
chr7 (1-59)||(19021023-19021081)
chr7 (136-214)||(48642094-48642172)
chr7 (133-200)||(25765043-25765110)
chr7 (3-57)||(10594147-10594201)
chr7 (1-57)||(40862420-40862476)
chr7 (1-57)||(43775944-43776000)
[»] chr4 (26 HSPs)
chr4 (1-235)||(19873918-19874159)
chr4 (1-235)||(37234001-37234242)
chr4 (1-239)||(39540193-39540438)
chr4 (1-235)||(42723977-42724218)
chr4 (1-235)||(20434223-20434464)
chr4 (1-235)||(25857601-25857842)
chr4 (1-235)||(28406234-28406475)
chr4 (1-235)||(42348721-42348962)
chr4 (1-235)||(52912989-52913230)
chr4 (1-235)||(53874906-53875147)
chr4 (1-235)||(55215389-55215630)
chr4 (1-235)||(38291651-38291892)
chr4 (1-235)||(55219928-55220169)
chr4 (1-235)||(613884-614125)
chr4 (1-235)||(52839528-52839769)
chr4 (1-235)||(55183323-55183564)
chr4 (1-235)||(56362879-56363119)
chr4 (1-235)||(23894990-23895232)
chr4 (1-235)||(53035814-53036052)
chr4 (1-223)||(52307265-52307494)
chr4 (1-206)||(10541857-10542069)
chr4 (1-98)||(43830157-43830254)
chr4 (1-57)||(49306-49362)
chr4 (1-66)||(11682269-11682334)
chr4 (1-66)||(11690548-11690613)
chr4 (1-65)||(24897046-24897109)
[»] chr3 (30 HSPs)
chr3 (1-235)||(20835377-20835618)
chr3 (1-235)||(22781702-22781943)
chr3 (1-235)||(33712419-33712659)
chr3 (1-235)||(37971469-37971710)
chr3 (1-235)||(38871181-38871422)
chr3 (1-235)||(4044603-4044844)
chr3 (1-235)||(4515809-4516050)
chr3 (1-235)||(25710947-25711188)
chr3 (1-235)||(41069896-41070136)
chr3 (4-235)||(36430331-36430568)
chr3 (1-235)||(10841228-10841468)
chr3 (1-235)||(53974371-53974611)
chr3 (5-235)||(6268153-6268390)
chr3 (1-235)||(40585964-40586207)
chr3 (1-235)||(20048395-20048639)
chr3 (1-235)||(10999539-10999782)
chr3 (1-235)||(33966956-33967183)
chr3 (1-177)||(7156541-7156707)
chr3 (136-214)||(47098139-47098217)
chr3 (3-66)||(47098274-47098337)
chr3 (136-214)||(1774218-1774296)
chr3 (1-60)||(54556408-54556467)
chr3 (4-66)||(39627093-39627154)
chr3 (3-67)||(1774098-1774162)
chr3 (4-66)||(28411160-28411222)
chr3 (1-66)||(36232642-36232707)
chr3 (1-66)||(36885711-36885776)
chr3 (1-66)||(38145211-38145276)
chr3 (3-59)||(7680981-7681037)
chr3 (1-57)||(49779834-49779890)
[»] chr1 (28 HSPs)
chr1 (1-235)||(52044171-52044412)
chr1 (1-235)||(6653285-6653526)
chr1 (1-235)||(34270555-34270796)
chr1 (1-235)||(39569237-39569478)
chr1 (1-235)||(44721932-44722173)
chr1 (1-235)||(52024786-52025027)
chr1 (1-235)||(42948250-42948492)
chr1 (1-235)||(2482411-2482655)
chr1 (1-235)||(18909276-18909517)
chr1 (1-239)||(13942204-13942449)
chr1 (1-235)||(26150947-26151188)
chr1 (1-235)||(51677030-51677271)
chr1 (1-235)||(2138027-2138268)
chr1 (1-235)||(24317242-24317481)
chr1 (1-235)||(50727858-50728099)
chr1 (1-235)||(20581560-20581802)
chr1 (1-200)||(33010603-33010809)
chr1 (1-206)||(40400094-40400306)
chr1 (1-180)||(15932847-15933033)
chr1 (4-177)||(49823268-49823448)
chr1 (1-145)||(28852791-28852942)
chr1 (134-174)||(13240166-13240206)
chr1 (3-66)||(51776092-51776155)
chr1 (3-57)||(12601916-12601970)
chr1 (1-66)||(29922183-29922248)
chr1 (19-67)||(1701828-1701876)
chr1 (1-57)||(40498678-40498734)
chr1 (1-57)||(51001999-51002055)
[»] scaffold0391 (1 HSPs)
scaffold0391 (1-235)||(3936-4177)
[»] chr8 (26 HSPs)
chr8 (1-235)||(23357038-23357279)
chr8 (1-235)||(8376301-8376542)
chr8 (1-235)||(26122307-26122548)
chr8 (1-235)||(42512220-42512461)
chr8 (4-235)||(34564810-34565048)
chr8 (1-235)||(35605398-35605639)
chr8 (1-235)||(24822505-24822746)
chr8 (1-235)||(39365307-39365547)
chr8 (1-235)||(43664107-43664347)
chr8 (1-235)||(26290560-26290801)
chr8 (1-235)||(26303817-26304058)
chr8 (1-235)||(26337172-26337413)
chr8 (1-206)||(3032708-3032920)
chr8 (1-190)||(17122151-17122347)
chr8 (1-194)||(8656615-8656815)
chr8 (1-206)||(5988249-5988461)
chr8 (1-206)||(3137035-3137247)
chr8 (1-186)||(34917599-34917791)
chr8 (1-155)||(22439467-22439628)
chr8 (136-214)||(2828154-2828232)
chr8 (136-208)||(7969866-7969938)
chr8 (1-66)||(7969992-7970056)
chr8 (3-57)||(38168452-38168506)
chr8 (3-57)||(42687908-42687962)
chr8 (177-214)||(44695641-44695678)
chr8 (1-65)||(5347437-5347500)
[»] chr5 (20 HSPs)
chr5 (1-235)||(4155952-4156193)
chr5 (1-235)||(9065759-9066000)
chr5 (1-235)||(33280870-33281111)
chr5 (4-235)||(43293441-43293679)
chr5 (1-235)||(19034504-19034745)
chr5 (1-235)||(24559129-24559370)
chr5 (1-235)||(24600161-24600402)
chr5 (1-231)||(37865936-37866173)
chr5 (1-235)||(13145665-13145905)
chr5 (1-203)||(31527393-31527602)
chr5 (1-235)||(43518072-43518316)
chr5 (136-214)||(12189146-12189224)
chr5 (199-235)||(31511169-31511205)
chr5 (3-58)||(12189273-12189328)
chr5 (1-66)||(6245248-6245313)
chr5 (1-66)||(18864491-18864556)
chr5 (3-60)||(36294244-36294301)
chr5 (1-66)||(40738953-40739018)
chr5 (3-52)||(41881893-41881942)
chr5 (3-51)||(37340863-37340911)
[»] chr2 (25 HSPs)
chr2 (1-235)||(1481872-1482113)
chr2 (1-235)||(1520237-1520478)
chr2 (1-235)||(25853215-25853456)
chr2 (1-235)||(37094149-37094390)
chr2 (1-235)||(44143421-44143662)
chr2 (1-235)||(2390470-2390710)
chr2 (1-235)||(45505568-45505809)
chr2 (1-235)||(21657988-21658228)
chr2 (1-235)||(34202340-34202581)
chr2 (1-235)||(39697560-39697801)
chr2 (1-235)||(42343029-42343269)
chr2 (1-235)||(40811556-40811796)
chr2 (1-235)||(3178287-3178527)
chr2 (1-219)||(43577064-43577289)
chr2 (1-235)||(13195921-13196161)
chr2 (1-235)||(10638839-10639081)
chr2 (66-235)||(927170-927346)
chr2 (9-235)||(874953-875175)
chr2 (1-118)||(15011880-15012002)
chr2 (1-40)||(927125-927164)
chr2 (1-66)||(13480508-13480573)
chr2 (1-66)||(38629368-38629433)
chr2 (1-57)||(44456780-44456836)
chr2 (1-65)||(44798870-44798933)
chr2 (1-65)||(45443516-45443579)
[»] scaffold0368 (1 HSPs)
scaffold0368 (1-235)||(13923-14165)
[»] chr6 (15 HSPs)
chr6 (1-235)||(7141324-7141565)
chr6 (1-235)||(6625419-6625660)
chr6 (1-235)||(29122136-29122377)
chr6 (1-235)||(18893736-18893977)
chr6 (1-235)||(6167718-6167959)
chr6 (1-235)||(29630277-29630519)
chr6 (1-235)||(3094649-3094892)
chr6 (1-152)||(25335003-25335161)
chr6 (1-129)||(13889848-13889981)
chr6 (178-235)||(13889792-13889849)
chr6 (137-214)||(7081155-7081232)
chr6 (137-214)||(8811127-8811204)
chr6 (4-66)||(7081036-7081098)
chr6 (3-66)||(8811261-8811324)
chr6 (1-66)||(18024440-18024505)
[»] scaffold0438 (1 HSPs)
scaffold0438 (1-235)||(1897-2138)
[»] scaffold0276 (2 HSPs)
scaffold0276 (1-235)||(13832-14072)
scaffold0276 (1-183)||(12581-12770)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-235)||(156898-157138)
[»] scaffold0248 (1 HSPs)
scaffold0248 (4-131)||(2912-3044)
[»] scaffold0896 (2 HSPs)
scaffold0896 (3-66)||(3708-3771)
scaffold0896 (137-214)||(3575-3651)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 47065959 - 47065718
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47065959 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 47065860  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47065859 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 47065760  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  47065759 tgtttttcttgttatgggttctcagttctgattttgtgtttt 47065718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7900494 - 7900735
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7900494 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 7900593  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7900594 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattg 7900693  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7900694 tgtttttcttgttatgggttctcagttctgattttgtgtttt 7900735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26015885 - 26015644
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26015885 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 26015786  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26015785 ctgcgaagatttttaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 26015686  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26015685 tgtttttcttgttatgggttctcagttctgattttgtgtttt 26015644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 27325016 - 27325257
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  27325016 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgtt 27325115  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27325116 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 27325215  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  27325216 tgtttttcttgttatgggttctcagttctgattttgtgtttt 27325257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32542202 - 32541961
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32542202 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 32542103  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32542102 ctacgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 32542003  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32542002 tgtttttcttgttatgggttctcagttctgattttgtgtttt 32541961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 43246976 - 43246735
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43246976 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 43246877  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43246876 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 43246777  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  43246776 tgtttttctttttatgggttctcagttctgattttgtgtttt 43246735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 46322065 - 46321824
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46322065 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 46321966  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46321965 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttgaatcgattg 46321866  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  46321865 tgtttttcttgttatgggttctcagttctgattttgtgtttt 46321824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 40995248 - 40995489
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40995248 ttcataaaatttgattatcaaaaagcatattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 40995347  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40995348 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 40995447  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40995448 tgtttttcttgttatgggttctcagttctgattttgtgtttt 40995489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 46923939 - 46924179
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46923939 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 46924038  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46924039 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 46924138  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  46924139 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 46924179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 8215937 - 8215696
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  8215937 ttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgtt 8215838  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8215837 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 8215738  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  8215737 tgtttttcttgttatgggttctcagttctgattttgtgtttt 8215696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 34591737 - 34591978
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34591737 ttcataaaatttgattttcaaaaagcctattccttttttttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 34591836  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34591837 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 34591936  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  34591937 tgtttttcttgttgtgggttctcaattctgattttgtgtttt 34591978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 40705531 - 40705291
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40705531 ttcataaaatttgattttcaaaaagcctattccttcatttt-ggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 40705433  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40705432 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 40705333  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  40705332 tgtttgtcttgttatgggttctcagttctgattttgtgtttt 40705291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 8203460 - 8203217
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||    
T  8203460 ttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaaccccttttccaaaaccataattctccaatcgatcgattgtgtt 8203361  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8203360 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 8203261  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  8203260 tgtttttcttgttatgggttctcagttctgcgattttgtgtttt 8203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 21279088 - 21278845
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  21279088 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgtt 21278989  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21278988 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaattaggttagcaagtgttgttcttcaatcgattg 21278889  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||| ||||||||||||||||||  |||||||||||||    
T  21278888 tgtttttcttcttatgggttctcagttctgcgattttgtgtttt 21278845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 40994829 - 40994591
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||       
T  40994829 ataaaatttgattttcaaaaagtctattccttcttttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgttctg 40994730  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 196  Q
      ||||||||||||||||||||||||||||| | |  |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40994729 cgaagattttcaaaaccatactttctcacgttcattcatgatttccaagaaaattcgaagcaaaccaggttagcaagtgttgttcttcaatcgattgtgt 40994630  T
Q  197 ttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  40994629 ttttcttgttatgagttctcagttctgattttgtgtttt 40994591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 25876840 - 25877080
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       
T  25876840 ataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaacccctcttccaaaatcataattctccaatcgatcgattgtgttctg 25876939  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 196  Q
      ||||||||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25876940 cgaagattttcaaaaccatactttctcacgtccattcatgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 25877039  T
Q  197 ttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    ||||||| ||||||||||||||||||  |||||||||||||    
T  25877040 ttttcttcttatgggttctcagttctgcgattttgtgtttt 25877080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 38876073 - 38875874
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  38876073 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgtt 38875974  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38875973 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 38875874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 47779528 - 47779284
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  47779528 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgtt 47779429  T
Q  101 -----aagattttcaaaaccatactttctcacgtcc--gtatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||| |||| ||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47779428 ctgcgaagattttcaaaatcatattttctcacgtccatttatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 47779329  T
Q  194 tg-tttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    || |||||||| ||||||||||||||||||  |||||||||||||    
T  47779328 tgttttttcttcttatgggttctcagttctgcgattttgtgtttt 47779284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 7790964 - 7791188
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttg-gttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgt 99  Q
    |||||||||||||||||| |||| ||||||||||||||||||  ||||||||||||||  | |||||||||| |||||||||||||||||||||||||||    
T  7790964 ttcataaaatttgattttcaaaatgcctattccttcttttttttgttacaccccaaaaatcctcttccaaaaccataattctccaatcgatcgattgtgt 7791063  T
Q  100 t-----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgatt 192  Q
    |     ||||||||||||||||||||||||||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7791064 tctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagcaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgatt 7791163  T
Q  193 gtgtttttcttgttatgggttctca 217  Q
    ||||||||||||||||| |||||||    
T  7791164 gtgtttttcttgttatgagttctca 7791188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 38283610 - 38283414
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38283610 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 38283511  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 190  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38283510 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 38283414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32662387 - 32662167
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |                   
T  32662387 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctgcga--------------- 32662303  T
Q  101 aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttt 198  Q
     |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  32662302 -agattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcaattgtgttt 32662204  T
Q  199 ttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||| |||||||||||||||||||||||||||||||||    
T  32662203 ttcctgttatgggttctcagttctgattttgtgtttt 32662167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 35924318 - 35924407
Alignment:
Q  146 aaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35924318 aaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattgcgtttttcttgttatgggttctcagttctgattttgtgtttt 35924407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19021081 - 19021023
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacc 59  Q
    |||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||    
T  19021081 ttcataaaatttgattttcaaaaagtctcttccttattttttggttacaccccaaaacc 19021023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 48642094 - 48642172
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||||||||||||||  | ||||||| ||||  |||||||||||||||| | ||||||||||||| |||||    
T  48642094 gatttcaaagaaaattcgaagcatgtgaggttagtaagttgtgttcttcaatcgattatatttttcttgttattggttc 48642172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 25765043 - 25765110
Alignment:
Q  133 tatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgttttt 200  Q
    |||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||| | |||||||    
T  25765043 tatgatttcaaagaaaattcgaagcagataaggttagcatgttgtgttcttcaatcgactatgttttt 25765110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 10594147 - 10594201
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||    
T  10594147 cataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 10594201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40862420 - 40862476
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  40862420 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 40862476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 43775944 - 43776000
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  43775944 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 43776000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19874159 - 19873918
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19874159 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 19874060  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19874059 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 19873960  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19873959 tgtttttcttgttatgggttctcagttctgattttgtgtttt 19873918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37234242 - 37234001
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37234242 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 37234143  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37234142 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 37234043  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37234042 tgtttttcttgttatgggttctcagttctgattttgtgtttt 37234001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 39540438 - 39540193
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39540438 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 39540339  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39540338 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaaacaaatcaggttagcaagtgttgttcttcaatcgattg 39540239  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttttctt 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39540238 tgtttttcttgttatgggttctcagttctgattttgtgtttttctt 39540193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 42724218 - 42723977
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42724218 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 42724119  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42724118 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 42724019  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42724018 tgtttttcttgttatgggttctcagttctgattttgtgtttt 42723977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 20434223 - 20434464
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  20434223 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgtt 20434322  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434323 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 20434422  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20434423 tgtttttcttgttatgggttctcagttctgattttgtgtttt 20434464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 25857601 - 25857842
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25857601 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 25857700  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25857701 ctgcgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 25857800  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25857801 tgtttttcttgttatgggttctcagttctgattttgtgtttt 25857842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 28406475 - 28406234
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28406475 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 28406376  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28406375 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 28406276  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  28406275 tgtttttcttgttatgggttctcagttctgattttgtgtttt 28406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42348721 - 42348962
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42348721 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgtt 42348820  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42348821 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 42348920  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42348921 tgtttttcttgttatgggttctcagttctgattttgtgtttt 42348962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 52913230 - 52912989
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  52913230 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgtt 52913131  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  52913130 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgttgttcttcaatcgattg 52913031  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52913030 tgtttttcttgttatgggttctcagttctgattttgtgtttt 52912989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 53875147 - 53874906
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  53875147 ttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgtt 53875048  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53875047 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 53874948  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  53874947 tgtttttcttgttatgggttctcagttctgattttgtgtttt 53874906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 55215630 - 55215389
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55215630 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 55215531  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55215530 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttattcaatcgattg 55215431  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  55215430 tgtttttcttgttacgggttctcagttctgattttgtgtttt 55215389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 38291892 - 38291651
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  38291892 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccctaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 38291793  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  38291792 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatccattg 38291693  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  38291692 tgtttttcttgttatgggttctcagttctgattttgagtttt 38291651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 55219928 - 55220169
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55219928 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 55220027  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55220028 ctgcgaagattttcaaaaccatactttctcacatccattcatgatttcaaataaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 55220127  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  55220128 tgtttttcttgttacgggttctcagttctgattttgtgtttt 55220169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 613884 - 614125
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  613884 ttcataaaatttgattttcaaaaagcctattccttctcttttggttacaccccaaaacccttcttccaaaaccataattctgcaatcgatcaattgtgtt 613983  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  613984 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 614083  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  614084 tgtttttcttgttatgggttcttagttctgattttgtgtttt 614125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 52839769 - 52839528
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  52839769 ttcataaaatttgattttcaaaaagcttattccttcttttttggttacaccccaaaacccttcttccaaaaccatgattctccaatcgatcgattgtgtt 52839670  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52839669 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttatcaagtgttgttcttcaatcgattg 52839570  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  52839569 tgtttttcttattatgggttctcagttctgattttgtgtttt 52839528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 55183564 - 55183323
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55183564 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 55183465  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55183464 ctgcgaagattttcaataccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 55183365  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||| ||||||||  |||||||||||||||||    
T  55183364 tgtttttcttgttacgggttctcttttctgattttgtgtttt 55183323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 56362879 - 56363119
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  56362879 ttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 56362978  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56362979 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 56363078  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||| ||||||||||||||||||    
T  56363079 tg-ttttcttgttatgggttctccgttctgattttgtgtttt 56363119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 23895232 - 23894990
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttctttttt-ggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgt 99  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||    
T  23895232 ttcataaaatttgattttcaaaaagcctattccttctttttttggttacaccccaaaaccattcttccaaaaccataattctccaaccgatcgattgtgt 23895133  T
Q  100 t-----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgatt 192  Q
    |     ||||||||||||||||||||||||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23895132 tctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcgaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgatt 23895033  T
Q  193 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  23895032 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 23894990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 53036052 - 53035814
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  53036052 ttcataaaatttgattttcaaa---cctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattatccaatcgatcgattgtgtt 53035956  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53035955 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaaatgttgttcttcaatcgattg 53035856  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    | |||||||||||| || ||||||||||||||||||||||||    
T  53035855 tatttttcttgttacggattctcagttctgattttgtgtttt 53035814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 52307494 - 52307265
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||    
T  52307494 ttcataaaatttaattttcaaaaagcctattccttctttcttggttacaccccaaaattcctcttccaaaaccataattctccaatcgatcgattgtgtt 52307395  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         | |||||| |||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52307394 ctgcgatgatttttaaaatcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 52307295  T
Q  194 tgtttttcttgttatgggttctcagttctg 223  Q
    ||||||||||||||||||||||||||||||    
T  52307294 tgtttttcttgttatgggttctcagttctg 52307265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 10542069 - 10541857
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10542069 ttcataaaatttgattttcaaaaagcatattctttctttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgtt 10541970  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10541969 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 10541870  T
Q  194 tgtttttcttgtt 206  Q
    |||||| ||||||    
T  10541869 tgttttccttgtt 10541857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43830254 - 43830157
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtg 98  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43830254 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtg 43830157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49362 - 49306
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||    
T  49362 ttcataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 49306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11682269 - 11682334
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  11682269 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 11682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11690548 - 11690613
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  11690548 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 11690613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 24897046 - 24897109
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttctt 65  Q
    |||||||||||| | ||| ||||||||| |||||| ||| | |||||||||||||||||| ||||    
T  24897046 ttcataaaatttaagtttcaaaaagcctcttcctt-tttgtcggttacaccccaaaacccctctt 24897109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 20835618 - 20835377
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20835618 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 20835519  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20835518 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 20835419  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  20835418 tgtttttcttgttatgggttctcagttctgattttgtgtttt 20835377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 22781943 - 22781702
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22781943 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 22781844  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22781843 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 22781744  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22781743 tgtttttcttgttatgggttctcagttctgattttgtgtttt 22781702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 33712659 - 33712419
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33712659 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 33712560  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33712559 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 33712460  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  33712459 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 33712419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 37971710 - 37971469
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37971710 ttcataaaatttgattttcaaaaagcctattcattcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 37971611  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37971610 ctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 37971511  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37971510 tgtttttcttgttatgggttctcagttctgattttgtgtttt 37971469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 38871181 - 38871422
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  38871181 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgattgtgtt 38871280  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38871281 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 38871380  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  38871381 tgtttttctttttatgggttctcagttctgattttgtgtttt 38871422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4044844 - 4044603
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  4044844 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgtt 4044745  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4044744 ctacgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattg 4044645  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  4044644 tgtttttcttattatgggttctcagttctgattttgtgtttt 4044603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4516050 - 4515809
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||  ||||||||    
T  4516050 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgattcattgtgtt 4515951  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4515950 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 4515851  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4515850 tgtttttcttgttatgggttctcagttctgattttgtgtttt 4515809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 25710947 - 25711188
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25710947 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatggtgtt 25711046  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25711047 ctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 25711146  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  25711147 tgtttttctttttatgggttctcagttctgattttgtgtttt 25711188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 41069896 - 41070136
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41069896 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 41069995  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41069996 ttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 41070095  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||| ||||||||||||    
T  41070096 tg-ttttcttgttatgggttctcagttctaattttgtgtttt 41070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 235
Target Start/End: Original strand, 36430331 - 36430568
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  36430331 ataaaatttgattttcaaaaagcctattccttctttttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttttg 36430430  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 196  Q
      ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36430431 cgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtg- 36430529  T
Q  197 ttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  36430530 ttttcttgttatgggttctcagttctaattttgtgtttt 36430568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10841468 - 10841228
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10841468 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 10841369  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10841368 ttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 10841269  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || || ||||||||||||||||||||||| ||||||||||||    
T  10841268 tg-ttctcttgttatgggttctcagttctaattttgtgtttt 10841228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 53974371 - 53974611
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  53974371 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatccatcgattgtgtt 53974470  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  53974471 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattg 53974570  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  53974571 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 53974611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 5 - 235
Target Start/End: Complemental strand, 6268390 - 6268153
Alignment:
Q  5 taaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt---- 100  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||        
T  6268390 taaaatttgattttcaaaaagcctattccttctttttttattacaccccaaaaccgttcttccaaaaccataattctccaatcgatcgattgtgttctac 6268291  T
Q  101 -aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtt 197  Q
     ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6268290 gaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtt 6268191  T
Q  198 tttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  6268190 tttcttgttgtgggttcttagttctgattttgtgtttt 6268153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 40586207 - 40585964
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  40586207 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaacctttcttccaaaaccataattctccaatcgatcgattgtgtt 40586108  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  40586107 cttcgaagattttcaaaaccatactttctcacgtccattcatgattttaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattg 40586008  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||| ||||||||||||||||||  |||||||||||||    
T  40586007 tgtttttcttcttatgggttctcagttctgcgattttgtgtttt 40585964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 20048395 - 20048639
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  20048395 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgtt 20048494  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20048495 ctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 20048594  T
Q  194 tg-tttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    || |||||||| ||||||||||||||||||  |||||||||||||    
T  20048595 tgttttttcttcttatgggttctcagttcttcgattttgtgtttt 20048639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 10999782 - 10999539
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||| |||||||||| ||||||||| |||| |||||||||||||    
T  10999782 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaacccctcttccaaaaccataattctgcaatagatcgattgtgtt 10999683  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10999682 ctgcgaagaatttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattg 10999583  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||| ||||||||||||||| ||  |||||||||||||    
T  10999582 tgtttttcttcttatgggttctcagtactgcgattttgtgtttt 10999539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 33966956 - 33967183
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||              |||||||| ||||||||||||||||||    
T  33966956 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacc--------------ataattcttcaatcgatcgattgtgtt 33967041  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33967042 ctgcgaagattttcaaaaccatactttctcacatccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 33967141  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33967142 tgtttttcttgttatgggttctcagttctgattttgtgtttt 33967183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 7156707 - 7156541
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||| |||||||||| |||| |||||||| |||||||           
T  7156707 ttcataaaatttgattttcaaagagtctattccttctttttaggttacaccccaaaacccctcttccaaaaccatatttctccaaacgatcga------- 7156615  T
Q  101 aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 177  Q
         |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||    
T  7156614 -----tttcaaaaccatactttctcacgtcctttcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 7156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 47098217 - 47098139
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||| ||||||||||| ||||||||| ||||||||||||  |||||||||||| ||| |||||||||||| ||||||||    
T  47098217 gattgcaaagaaaatttgaagcaaataaggttagcaagttgtgttcttcaatcaattatgtttttcttgtcatgggttc 47098139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 47098337 - 47098274
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||| ||||| |||||| || |||||||||| ||||||||||||||||||||||||||    
T  47098337 cataaaatttcattttcaaaaagtctcttccttctttcttggttacaccccaaaacccttcttc 47098274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 1774218 - 1774296
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||||||| ||||||||| ||||||| |||   |||||||||||||||| |||||| ||||| ||||||||    
T  1774218 gatttcaaagaaaatttgaagcaaataaggttaggaagctatgttcttcaatcgattatgttttacttgtcatgggttc 1774296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 54556408 - 54556467
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaaccc 60  Q
    |||||||||||||||||||||||||  | |||||||| | ||||||||||||||||||||    
T  54556408 ttcataaaatttgatttttaaaaagtttcttccttctctcttggttacaccccaaaaccc 54556467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 39627154 - 39627093
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||||||||||||| |||||    
T  39627154 ataaaattt-atttttaaaaagtattttccttcttttttggttacaccccaaaacccctcttc 39627093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 1774098 - 1774162
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttcc 67  Q
    |||||||||| ||||||||||||  | |||||||||| ||||||||| |||||||||| ||||||    
T  1774098 cataaaatttaatttttaaaaagtttcttccttctttcttggttacatcccaaaacccctcttcc 1774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 28411160 - 28411222
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    ||||||||| ||||||||||||| | |||||| ||| ||||||| |||| |||| ||||||||    
T  28411160 ataaaatttaatttttaaaaagcatcttccttttttcttggttataccctaaaatccttcttc 28411222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36232707 - 36232642
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  36232707 ttcataaaatttaattttaaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 36232642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 36885776 - 36885711
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  36885776 ttcataaaattttattttcaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 36885711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38145276 - 38145211
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  38145276 ttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 38145211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 7681037 - 7680981
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacc 59  Q
    |||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||||    
T  7681037 cataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaacc 7680981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 49779890 - 49779834
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  49779890 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 49779834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 52044412 - 52044171
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52044412 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 52044313  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52044312 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 52044213  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52044212 tgtttttcttgttatgggttctcagttctgattttgtgtttt 52044171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6653285 - 6653526
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6653285 ttcataaaatttgactttcaaaaagcctattccttcttttttggttacaccccaaaactcttcttccaaaatcataattctccaatcgatcgattgtgtt 6653384  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6653385 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 6653484  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6653485 tgtttttcttgttatgggttctcagttctgattttgtgtttt 6653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 34270796 - 34270555
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34270796 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 34270697  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34270696 ctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 34270597  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34270596 tgtttttcttgttatgggttctcagttctgattttgtgtttt 34270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 39569478 - 39569237
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  39569478 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgatcgtgtt 39569379  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39569378 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 39569279  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39569278 tgtttttcttgttatgggttctcagttctgattttgtgtttt 39569237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 44721932 - 44722173
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  44721932 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctctaatcgatcgattgtgtt 44722031  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44722032 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 44722131  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44722132 tgtttttcttgttatgggttctcagttctgattttgtgtttt 44722173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 52024786 - 52025027
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  52024786 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 52024885  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52024886 ctgcgaagattttcaaaaccatactttctcatgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 52024985  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  52024986 tgtttttcttgttatgggttctcagttctgattttgtgtttt 52025027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42948250 - 42948492
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42948250 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 42948349  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttc-aatcgatt 192  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42948350 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgatt 42948449  T
Q  193 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42948450 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 42948492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 2482655 - 2482411
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2482655 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 2482556  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt------atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcg 189  Q
         |||||||||||||||||||||||||||||||||      |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2482555 ctgcaaagattttcaaaaccatactttctcacgtccgtccattcatgatttcaaag-aaattcgaagcaaatcaggttagcaagtgttgttcttcaatcg 2482457  T
Q  190 attgtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2482456 attgtgtttttcttgttatgggttctcagttctgattttgtgtttt 2482411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 18909276 - 18909517
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18909276 ttcataaaatttgattttcaaaaagcctattctttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 18909375  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18909376 ctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 18909475  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  18909476 tgtttttcttgttatgggttctcagttttgattttgtgtttt 18909517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 13942204 - 13942449
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13942204 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaactcttcttccaaaaccataattctccaatcgatcgattgtgtt 13942303  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||    
T  13942304 tttcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatttaaagcaaatcaggttagcaagtgttgttcttcactcgattg 13942403  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttttctt 239  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  13942404 tgtttttcttattatgggttctcagttctgattttgtgtttttctt 13942449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26151188 - 26150947
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  26151188 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccctaaaactcttctttcaaaaccataattctccaatcgatcgattgtgtt 26151089  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26151088 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 26150989  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26150988 tgtttttcttgttatgggttctcagttctgattttgtgtttt 26150947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 51677271 - 51677030
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  51677271 ttcataaaatttgatttacaaaaagcctattccttcttttttggttacaccccaaaactcttcttccaaaaccataattctccaaccgatcgattgtgtt 51677172  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51677171 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattg 51677072  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  51677071 tgtttttcttgttatgggttctcagttctgattttgtgtttt 51677030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 2138268 - 2138027
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  2138268 ttcataaaatttgattttcaaaaaacctattccttcttttttggttacaccccaaaacccttcttccaaaactataattctccaattgatcgattgtgtt 2138169  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2138168 ctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattg 2138069  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2138068 tgtttttcttgttatgggttctcagttctgattttgtgtttt 2138027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24317242 - 24317481
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  24317242 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttcc-aaaccataattctccaatcgatcgattgtgtt 24317340  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24317341 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgatta 24317440  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  24317441 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 24317481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 50727858 - 50728099
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50727858 ttcataaaatttgattttcaaaaagcctattccttttttttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 50727957  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50727958 ctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgattg 50728057  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  50728058 tgtttttcttgttgtgggttctcagttctgattttgtgtttt 50728099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 20581560 - 20581802
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20581560 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccc-aaaacccctcttccaaaaccataattctccaatcgatcgattgtgtt 20581658  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  20581659 cttcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaattatgttagcaagtgttgttcttcaatcgattg 20581758  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  20581759 tgtttttcttgttatgggttctcagttctgcgattttgtgtttt 20581802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 33010809 - 33010603
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33010809 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 33010710  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33010709 ttgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 33010610  T
Q  194 tgttttt 200  Q
    |||||||    
T  33010609 tgttttt 33010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 40400094 - 40400306
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40400094 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgtt 40400193  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40400194 ctgcgaagattttcaaaaccatactttctcacgtccattcaggatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 40400293  T
Q  194 tgtttttcttgtt 206  Q
    |||||| ||||||    
T  40400294 tgttttccttgtt 40400306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 15932847 - 15933033
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15932847 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 15932946  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 180  Q
         |||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  15932947 ctgcgaagattttaaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgtt 15933033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 49823268 - 49823448
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||       
T  49823268 ataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccgaaaccataattctccaatcgatcgattgtgttctg 49823367  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgtt 177  Q
      |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||| ||||||||||||||||||||    
T  49823368 cgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcgaagtaaatcaggttagcaagtgtt 49823448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 28852942 - 28852791
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  28852942 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaactataattctccaatcgatcgattgtgtt 28852843  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaag 145  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||    
T  28852842 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaag 28852791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 13240206 - 13240166
Alignment:
Q  134 atgatttcaaagaaaattcgaagcaaatcaggttagcaagt 174  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13240206 atgatttcaaagaaaattcgaagcaaatcaggttagcaagt 13240166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 51776092 - 51776155
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||| ||||||||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  51776092 cataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaatccctcttc 51776155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 12601916 - 12601970
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||| ||||| ||||||| | |||||| |||||||||||||||| ||||    
T  12601916 cataaaatttaattttcaaaaagcatcttcctttttttttggttacaccctaaaa 12601970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29922248 - 29922183
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  29922248 ttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 29922183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 1701876 - 1701828
Alignment:
Q  19 taaaaagcctattccttcttttttggttacaccccaaaacccttcttcc 67  Q
    ||||||| || |||||||||||||||||||| |||||||| | ||||||    
T  1701876 taaaaagtcttttccttcttttttggttacatcccaaaactcctcttcc 1701828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 40498678 - 40498734
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  40498678 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 40498734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 51002055 - 51001999
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  51002055 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 51001999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 3936 - 4177
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  3936 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgtt 4035  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4036 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 4135  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4136 tgtttttcttgttatgggttctcagttctgattttgtgtttt 4177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 23357279 - 23357038
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23357279 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 23357180  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23357179 ctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 23357080  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23357079 tgtttttcttgttatgggttctcagttctgattttgtgtttt 23357038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 8376301 - 8376542
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8376301 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 8376400  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8376401 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 8376500  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  8376501 tgtttttctttttatgggttctcagttctgattttgtgtttt 8376542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26122548 - 26122307
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26122548 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 26122449  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26122448 ctgcgaagattttcaaaaccataatttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 26122349  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26122348 tgtttttcttgttatgggttctcagttctgattttgtgtttt 26122307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42512220 - 42512461
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  42512220 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccctcttccaaaattataattctccaatcgatcgattgtgtt 42512319  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42512320 ctccgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaagttagcaagtgttgttcttcaatcgattg 42512419  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  42512420 tgtttttcttgttatgggttctcagttctgattttgtgtttt 42512461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 34565048 - 34564810
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       
T  34565048 ataaaatttgattttcaaaaagcctattccttctttttttgttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtattctg 34564949  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 196  Q
      ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34564948 cgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 34564849  T
Q  197 ttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  34564848 tttttttgttatgggttctcagttctgattttgtgtttt 34564810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 35605398 - 35605639
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  35605398 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgct 35605497  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35605498 ctgcgaagattttcaaaaccatactttctcatgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 35605597  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  35605598 tgtttttcttgttatgagttctcagttctgattttgtgtttt 35605639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 24822746 - 24822505
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  24822746 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccattcttccaaaaccataattctccaatcgatcgatggtgtt 24822647  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24822646 ctgcgaagattttcaaaaccataatttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 24822547  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  24822546 tgtttttctttttatgggttctcagttctgattttgtgtttt 24822505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 39365307 - 39365547
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39365307 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 39365406  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  39365407 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaattgactg 39365506  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  39365507 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 39365547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 43664347 - 43664107
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  43664347 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaattgat-gattgtgtt 43664249  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43664248 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 43664149  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  43664148 tgtttttcttgttgtgggttctcagttctgattttgtgtttt 43664107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26290801 - 26290560
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26290801 ttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgtt 26290702  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
          |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26290701 ctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattg 26290602  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  26290601 tttttttcttgttatgggttctcagttctgattttgtgtttt 26290560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26304058 - 26303817
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26304058 ttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgtt 26303959  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
          |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26303958 ctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattg 26303859  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  26303858 tttttttcttgttatgggttctcagttctgattttgtgtttt 26303817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 26337413 - 26337172
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  26337413 ttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgtt 26337314  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
          |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26337313 ctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattg 26337214  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    | ||||||||||||||| ||||||||||||||||||||||||    
T  26337213 tttttttcttgttatggattctcagttctgattttgtgtttt 26337172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3032920 - 3032708
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3032920 ttcataacatttgattttcaaaaagcctatttcttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 3032821  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3032820 ctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 3032721  T
Q  194 tgtttttcttgtt 206  Q
    |||||| ||||||    
T  3032720 tgttttccttgtt 3032708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 17122151 - 17122347
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17122151 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 17122250  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 190  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17122251 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcga 17122347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8656615 - 8656815
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  8656615 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgtt 8656714  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8656715 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 8656814  T
Q  194 t 194  Q
    |    
T  8656815 t 8656815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 5988249 - 5988461
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| ||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  5988249 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacatcccaaaacccctcttccaaaaccataattctccaatcgattgattgtgtt 5988348  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5988349 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattg 5988448  T
Q  194 tgtttttcttgtt 206  Q
    |||||||||||||    
T  5988449 tgtttttcttgtt 5988461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3137247 - 3137035
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||| |||| ||||||||||||||| ||||||||||||    
T  3137247 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaacccctcttcgaaaaccataattctccaatcaatcgattgtgtt 3137148  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3137147 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtcttgttcttcaatcgattg 3137048  T
Q  194 tgtttttcttgtt 206  Q
    |||||| ||||||    
T  3137047 tgttttccttgtt 3137035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 34917599 - 34917791
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  34917599 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgtt 34917698  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaa 186  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34917699 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaa 34917791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 22439628 - 22439467
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22439628 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 22439529  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaa 155  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  22439528 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaa 22439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 2828232 - 2828154
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||||||||||||||||| |||||| |||||  |||||||| |||||||||||||||||||| ||||||||    
T  2828232 gatttcaaagaaaattcgaagcaaataaggttaacaagttgtgttcttcgatcgattgtgtttttcttgtcatgggttc 2828154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 7969938 - 7969866
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttat 208  Q
    ||||||||||||||||||||| | || ||||||| ||||  |||||||||||||||| ||||||||| |||||    
T  7969938 gatttcaaagaaaattcgaaggagatgaggttagtaagttgtgttcttcaatcgattatgtttttctagttat 7969866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 7970056 - 7969992
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| |||||||||||| || |||||||||| ||||||||||| |||||||| |||||    
T  7970056 ttcataaaattt-atttttaaaaagtcttttccttctttcttggttacacctcaaaacccctcttc 7969992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 38168506 - 38168452
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||| ||||| ||||||| |||||||| ||| |||||||||||| ||||    
T  38168506 cataaaatttaattttcaaaaagcatattccttttttcttggttacaccctaaaa 38168452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 42687962 - 42687908
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||| ||||||||||||| | |||||| ||| |||||||||||| ||||    
T  42687962 cataaaatttaatttttaaaaagcatcttccttttttcttggttacaccctaaaa 42687908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 44695641 - 44695678
Alignment:
Q  177 tgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  44695641 tgttcttcaatcgattatgtttttcttgtcatgggttc 44695678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5347500 - 5347437
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttctt 65  Q
    |||||||||||| | ||| ||||||||| |||||| ||| | |||||||||||||||||| ||||    
T  5347500 ttcataaaatttaagtttcaaaaagcctcttcctt-tttatcggttacaccccaaaacccctctt 5347437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 195; Significance: 1e-106; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 4156193 - 4155952
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4156193 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 4156094  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4156093 ctgcgaagattttcaaaatcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 4155994  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  4155993 tgtttttcttgttacgggttctcagttctgattttgtgtttt 4155952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 9065759 - 9066000
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  9065759 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaattgatcgattgtgtt 9065858  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9065859 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 9065958  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9065959 tgtttttcttgttatgggttctcagttctgattttgtgtttt 9066000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 33280870 - 33281111
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  33280870 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattttccaaccgatcgattgtgtt 33280969  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33280970 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattg 33281069  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  33281070 tgtttttcttgttatgggttctcagttctgattttgtgtttt 33281111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 43293679 - 43293441
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||       
T  43293679 ataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaacagatcgattgtgttctg 43293580  T
Q  101 --aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgt 196  Q
      ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43293579 cgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattgtgt 43293480  T
Q  197 ttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43293479 ttttcttgttatgggttctcagttctgattttgtgtttt 43293441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19034745 - 19034504
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19034745 ttcataaaatttgattttcaaaaagcttattccttcttttttggttacatcccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 19034646  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19034645 ctgcgaagattttcaaaaccatactttctcacgtctatttatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 19034546  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  19034545 tgtttttcttgttatggattctcagttctgattttgtgtttt 19034504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24559129 - 24559370
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||| ||||||    
T  24559129 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgtt 24559228  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24559229 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 24559328  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24559329 tgtttttcttgttatgggttctcagttctgattttgtgtttt 24559370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 24600161 - 24600402
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||| ||||||    
T  24600161 ttcataaaatttgattttcaaaaagtctattccttcttttttggttacaccccaaaacctttcttacaaaaccataattctctaatcgatcgactgtgtt 24600260  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24600261 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 24600360  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  24600361 tgtttttcttgttatgggttctcagttctgattttgtgtttt 24600402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 37865936 - 37866173
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  37865936 ttcataaaatttgattttcaaaaagcctatttcttcttttttggttacaccccaaaaccattcttccaaaaccataattctccaatcaatcgattgtgtt 37866035  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37866036 ctgcgaagattttcaaaaccatactttctcacgtctattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 37866135  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtg 231  Q
    |||||||||| |||||||||||||||||||||||||||    
T  37866136 tgtttttcttattatgggttctcagttctgattttgtg 37866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 13145905 - 13145665
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  13145905 ttcataaaatttgattttcaaaaaaccttttccttcttttttgattacaccccaaaacccttcttccaaaaccataattctcaaatcgatcgattgtgtt 13145806  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13145805 ctgcaaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattg 13145706  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  13145705 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 13145665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 31527602 - 31527393
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  31527602 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgtt 31527503  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||| | |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31527502 ctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 31527403  T
Q  194 tgtttttctt 203  Q
    ||||||||||    
T  31527402 tgtttttctt 31527393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 43518316 - 43518072
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||| ||||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  43518316 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacactccaaaacccctcttccaaaaccataattctacaatcgatcgattgtgtt 43518217  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43518216 ctgcgaagattttcaaaaccatactttctcacgtccattaatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 43518117  T
Q  194 tg-tttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    || |||||||| ||||||||||||||||||  |||||||||||||    
T  43518116 tgttttttcttcttatgggttctcagttctgcgattttgtgtttt 43518072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 12189224 - 12189146
Alignment:
Q  136 gatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    ||||||||||||| |||||||||||| ||||||||||||| |||||||| ||| ||| |||||||||||| ||||||||    
T  12189224 gatttcaaagaaagttcgaagcaaatgaggttagcaagtggtgttcttcgatcaattatgtttttcttgtcatgggttc 12189146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 31511205 - 31511169
Alignment:
Q  199 ttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||    
T  31511205 ttcttgttatgggttctcagttctgattttgtgtttt 31511169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 12189328 - 12189273
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaac 58  Q
    |||||||||| ||||| ||||| ||| | |||||||| ||||||||||||||||||    
T  12189328 cataaaatttaattttcaaaaaacctctcccttctttcttggttacaccccaaaac 12189273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 6245248 - 6245313
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  6245248 ttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 6245313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18864491 - 18864556
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  18864491 ttcataaaatttaattttaaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 18864556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 36294244 - 36294301
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaaccc 60  Q
    |||||||||| ||||| |||| |||| |||||||||  |||| |||||||||||||||    
T  36294244 cataaaatttaattttcaaaaggcctcttccttcttccttggctacaccccaaaaccc 36294301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40738953 - 40739018
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  40738953 ttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 40739018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 41881942 - 41881893
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccc 52  Q
    |||||||||| ||||| ||||||| |||||||| ||| ||||||||||||    
T  41881942 cataaaatttaattttcaaaaagcatattccttttttcttggttacaccc 41881893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 37340863 - 37340911
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacacc 51  Q
    |||||||||| ||||| ||||||| | |||||| |||||||||||||||    
T  37340863 cataaaatttaattttcaaaaagcatcttcctttttttttggttacacc 37340911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1481872 - 1482113
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1481872 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 1481971  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1481972 ctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 1482071  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1482072 tgtttttcttgttatgggttctcagttctgattttgtgtttt 1482113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 1520237 - 1520478
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1520237 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 1520336  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1520337 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattg 1520436  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1520437 tgtttttcttgttatgggttctcagttctgattttgtgtttt 1520478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 25853456 - 25853215
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25853456 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 25853357  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25853356 ctgcgaagattttcaaaaccatactttttcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 25853257  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25853256 tgtttttcttgttatgggttctcagttctgattttgtgtttt 25853215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 37094149 - 37094390
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37094149 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 37094248  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37094249 ctgcaaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 37094348  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  37094349 tgtttttcttgttgtgggttctcagttctgattttgtgtttt 37094390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 44143421 - 44143662
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44143421 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 44143520  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
    |     |||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  44143521 atgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 44143620  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  44143621 tgtttttcttgttatgggttctcagttctgattttgtgtttt 44143662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 2390710 - 2390470
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2390710 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 2390611  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2390610 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 2390511  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  2390510 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 2390470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 45505809 - 45505568
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  45505809 ttcataaaatttaattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 45505710  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45505709 ctgcgaagatttttaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 45505610  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  45505609 tgtttttcttgttatgggttctcagttctgattttgtgtttt 45505568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 21657988 - 21658228
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21657988 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 21658087  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658088 ctgcgaagattttcaaaactatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 21658187  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  21658188 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 21658228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 34202340 - 34202581
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||    
T  34202340 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttcaaaaaccataattctccaatcgattgattgtgtt 34202439  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||||||||| |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34202440 ctgcgaagattttcaaaaccatattttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 34202539  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  34202540 tgtttttcttgttatgggttctcagttctgattttgtgtttt 34202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 39697801 - 39697560
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39697801 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 39697702  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  39697701 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattagaagcaaatcaggttagcaagtgttgttcttcaatcgattg 39697602  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  39697601 tgtttttcttgttatgggttctcagttctgattttgtatttt 39697560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 42343029 - 42343269
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  42343029 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttctttcaaaaccataattctccaatcgatcgattgtgtt 42343128  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42343129 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 42343228  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  42343229 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 42343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 40811796 - 40811556
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  40811796 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatagattgtgtt 40811697  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40811696 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 40811597  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  40811596 tg-ttttcttgttatgggttctcagttctgattttgtgtttt 40811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 3178287 - 3178527
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  3178287 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaagccataattctccaatcgatcgattgtgtt 3178386  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3178387 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttaacaagtgttgttcttcaatcgattg 3178486  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  3178487 tgtttttcttgttat-ggttctcagttttgattttgtgtttt 3178527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 43577064 - 43577289
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  43577064 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 43577163  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43577164 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttgaatcgattg 43577263  T
Q  194 tgtttttcttgttatgggttctcagt 219  Q
    ||||||||||||||||||||||||||    
T  43577264 tgtttttcttgttatgggttctcagt 43577289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 13196161 - 13195921
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13196161 ttcataaaatttgattttcaaaaagcctattccttcttttgtggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 13196062  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||  |  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  13196061 ctgcgaagattttcaaaaccatactttctcacgtctattcatgatttcaaagaaaatttgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 13195962  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    || ||||||||||||| |||||||||||||||||||||||||    
T  13195961 tg-ttttcttgttatgagttctcagttctgattttgtgtttt 13195921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 10638839 - 10639081
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||||    
T  10638839 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaacccct-cttccaaaaccataattctccaatcgatcgattctgtt 10638937  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
    |     |||||||||||||||||||||||||||||| |  ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10638938 atgcgaagattttcaaaaccatactttctcacgtccattcatggttttaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcaattg 10639037  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||| ||||||||||||||||||  |||||||||||||    
T  10639038 tgtttttcttcttatgggttctcagttctgcgattttgtgtttt 10639081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 927170 - 927346
Alignment:
Q  66 ccaaaatcataattctccaatcgatcgattgtgtt-----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagca 158  Q
    |||||| ||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  927170 ccaaaaccataattctccaatcgatcgattgtgttctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagca 927269  T
Q  159 aatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  927270 aatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgtttt 927346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 9 - 235
Target Start/End: Original strand, 874953 - 875175
Alignment:
Q  9 atttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgttaagatttt 108  Q
    |||||||||| |||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||| |||||  |         
T  874953 atttgattttcaaaaagcctattccttatttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcaatcgatcgtgttctg----- 875047  T
Q  109 caaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 206  Q
    | |||   |||| |||||||||| |  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  875048 cgaaa---tactctctcacgtccattcacgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgtt 875144  T
Q  207 atgggttctcagttc--tgattttgtgtttt 235  Q
    |||||||||||||||  ||||||||||||||    
T  875145 atgggttctcagttctgtgattttgtgtttt 875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15011880 - 15012002
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15011880 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 15011979  T
Q  101 -----aagattttcaaaaccata 118  Q
         ||||||||||||||||||    
T  15011980 ctgcgaagattttcaaaaccata 15012002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 927125 - 927164
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttctttt 40  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  927125 ttcataaaatttgattttcaaaaagcctattccttctttt 927164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13480573 - 13480508
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| |||| || |||||    
T  13480573 ttcataaaatttaattttcaaaaagcattttccttttttcttggttacaccctaaaatccctcttc 13480508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38629433 - 38629368
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||| ||||| |||||| || |||||| ||| |||||||||||| |||| || |||||    
T  38629433 ttcataaaatttaattttcaaaaagactcttccttttttcttggttacaccctaaaatccctcttc 38629368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 44456836 - 44456780
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaa 57  Q
    |||||||||||| ||||| ||||||| | |||||| ||| |||||||||||| ||||    
T  44456836 ttcataaaatttaattttcaaaaagcatcttccttttttcttggttacaccctaaaa 44456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 44798870 - 44798933
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttctt 65  Q
    |||||||||||| | ||| ||||||||| |||||| ||| | |||||||||||||||||| ||||    
T  44798870 ttcataaaatttaagtttcaaaaagcctcttcctt-tttctcggttacaccccaaaacccctctt 44798933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 45443579 - 45443516
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttctt 65  Q
    |||||||||||| ||||| ||||||||| ||| || ||| | |||||||||||||||||| ||||    
T  45443579 ttcataaaatttaattttcaaaaagcctcttcatt-tttctcggttacaccccaaaacccctctt 45443516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 13923 - 14165
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13923 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 14022  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttc-aatcgatt 192  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14023 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaaatcgatt 14122  T
Q  193 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14123 gtgtttttcttgttatgggttctcagttctgattttgtgtttt 14165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 7141324 - 7141565
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  7141324 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttattccaaaaccataattctccaatcgatcgattgtgtt 7141423  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7141424 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 7141523  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  7141524 tgttttttttgttatgggttctcagttctgattttgtgtttt 7141565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 6625419 - 6625660
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  6625419 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaaccgatcgattgtgtt 6625518  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6625519 ctgcgaagattttcaaaaccatactttctcacgttcattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatagattg 6625618  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  6625619 tgtttttcttgttatgggttctcagttctgattttgtgtttt 6625660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 29122377 - 29122136
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  29122377 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacacctcaaaacccttcttccaaaaccataattcttcaatcgatcgattgtgtt 29122278  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
    |     |||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29122277 atgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 29122178  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  29122177 tgtttttcttattatgggttctcagttctgattttgtgtttt 29122136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 18893736 - 18893977
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||    
T  18893736 ttcataaaatttgattttcaaaaagcatattccttcttttttggttacaccccaaaacccttcttccagaaccataattctccaaccgattgattgtgtt 18893835  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18893836 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 18893935  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18893936 tgtttttcttgttatgggttctcagttctgattttgtgtttt 18893977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 6167959 - 6167718
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  6167959 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaatccataattctccaatcgatcgattgtgtt 6167860  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         |||||||||||| |||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6167859 ctgcgaagattttcaaacccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 6167760  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  6167759 tgtttttcttgtggtcggttctcagttctgattttgtgtttt 6167718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 29630519 - 29630277
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  29630519 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgtt 29630420  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29630419 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcaaagcaaatcaggttagcaagtgttgttcttcaatcgattg 29630320  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    || ||||||| ||||||||||||||||||  |||||||||||||    
T  29630319 tg-ttttcttcttatgggttctcagttctgcgattttgtgtttt 29630277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 3094649 - 3094892
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||||||||||| ||||    
T  3094649 ttcataaaatttgattttcaaaaagcatattccttctttcttggttacaccccaaaacctctcttccaaaaccataattctccaatcgatcgattatgtt 3094748  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  3094749 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaataaaattcgaagcaaatcatgttagcaagtgttgttcttcaatcgattg 3094848  T
Q  194 tgtttttcttgttatgggttctcagttct--gattttgtgtttt 235  Q
    |||||||||| ||||||||||||||||||  |||||||||||||    
T  3094849 tgtttttcttcttatgggttctcagttctgcgattttgtgtttt 3094892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 25335161 - 25335003
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25335161 ttcataaaatttgattttcaaaaagcttattccttctttttttgttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 25335062  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattc 152  Q
         ||||||||||||||||||||||||||||||| |  |||||||||||||||||||    
T  25335061 ctgcgaagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattc 25335003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13889981 - 13889848
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13889981 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcgattgtgtt 13889882  T
Q  101 -----aagattttcaaaaccatactttctcacgt 129  Q
         |||||||||||||||||||||||||||||    
T  13889881 ctacgaagattttcaaaaccatactttctcacgt 13889848  T

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Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 235
Target Start/End: Complemental strand, 13889849 - 13889792
Alignment:
Q  178 gttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13889849 gttcttcaatcgattgtgtttttcttgttatgggttctcagttctgattttgtgtttt 13889792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 7081155 - 7081232
Alignment:
Q  137 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||| |||||||||||| |||||| |||||  | |||||||||| ||| |||||||||||||||||||||    
T  7081155 atttcaaagaaatttcgaagcaaataaggttaacaagttgtattcttcaatcaattatgtttttcttgttatgggttc 7081232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 8811204 - 8811127
Alignment:
Q  137 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||| ||| |||||||| ||||||||||||  | |||||||||| ||| |||||||||||||||||||||    
T  8811204 atttcaaagaaatttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 8811127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 7081036 - 7081098
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||| || |||||    
T  7081036 ataaaatttgattttcaaaaagcctcttccttcttttttggttacactccaaaatccctcttc 7081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 8811324 - 8811261
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||||||| ||||||| | |||||| ||| |||||||||| |||||||||||||||    
T  8811324 cataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 8811261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 18024440 - 18024505
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||| | ||||| ||||||| | |||||||||| |||||||||||| ||||||| |||||    
T  18024440 ttcataaaatctaattttgaaaaagcttcttccttctttcttggttacacccgaaaacccctcttc 18024505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0438 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 2138 - 1897
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2138 ttcataaaatttgattttcaaaaagcccattccttcttttttggttacaccccaaaatccttcttccaaaaccataattctccaatcgatcgattgtgtt 2039  T
Q  101 a-----agattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
          |||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2038 ctgcggagattttcaaaaccatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagaaagtgttgttcttcaatcgattg 1939  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  1938 tttttttcttgttatgggttctcagttctgattttgtgtttt 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 14072 - 13832
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||    
T  14072 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaaccctttttccaaaacgataattcttcaatccatcgattgtgtt 13973  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13972 ctgcgaagattttcaaaagcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 13873  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  13872 tgttttt-ttgttatgggttctcagttctgattttgtgtttt 13832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12581 - 12770
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  12581 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattcttcaatccatcgattgtgtt 12680  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttctt 183  Q
         ||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12681 ctgcgaagattttcaaaagcatactttctcacgtccattcatgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttctt 12770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 157138 - 156898
Alignment:
Q  1 ttcataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  157138 ttcataaaatttgattttcaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaaccataattctccaatcgatcaattgtgtt 157039  T
Q  101 -----aagattttcaaaaccatactttctcacgtccgt--atgatttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 193  Q
         ||||||||||||||||||||||||||||||| |  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  157038 ctgcgaagattttcaaaaccatactttctcacgtccattcatgattttcaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattg 156939  T
Q  194 tgtttttcttgttatgggttctcagttctgattttgtgtttt 235  Q
     | |||||||||||||||||||||||||| ||||||||||||    
T  156938 cg-ttttcttgttatgggttctcagttctaattttgtgtttt 156898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 3044 - 2912
Alignment:
Q  4 ataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttccaaaatcataattctccaatcgatcgattgtgtt--- 100  Q
    ||||||||||||||| ||||||| ||||||| ||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||       
T  3044 ataaaatttgattttcaaaaagcatattcctcctttcatggttacaccccaaaacccctcttccaaaaccataattctccaatcgatcgattgtgttctg 2945  T
Q  101 --aagattttcaaaaccatactttctcacgtcc 131  Q
      |||||||||||||||||||||||||||||||    
T  2944 cgaagattttcaaaaccatactttctcacgtcc 2912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 3771 - 3708
Alignment:
Q  3 cataaaatttgatttttaaaaagcctattccttcttttttggttacaccccaaaacccttcttc 66  Q
    |||||||||||||||| ||||||| | |||||| ||| |||||||||| |||||||||||||||    
T  3771 cataaaatttgattttgaaaaagcatcttccttttttcttggttacactccaaaacccttcttc 3708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0896; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 3651 - 3575
Alignment:
Q  137 atttcaaagaaaattcgaagcaaatcaggttagcaagtgttgttcttcaatcgattgtgtttttcttgttatgggttc 214  Q
    |||||||||||  ||| |||||||| ||||||||||||  | |||||||||| ||| |||||||||||||||||||||    
T  3651 atttcaaagaat-ttcaaagcaaataaggttagcaagttgtattcttcaatcaattatgtttttcttgttatgggttc 3575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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