View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5006_low_23 (Length: 231)
Name: NF5006_low_23
Description: NF5006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5006_low_23 |
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Alignment Details
Target: chr3 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 26 - 150
Target Start/End: Original strand, 15268430 - 15268554
Alignment:
| Q |
26 |
tgtacatattgtgtacatgacttgtagatttgtaattagagaagagtgctctcctattttaaggcctttggagtcatttcccacttaattgacgatttat |
125 |
Q |
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| T |
15268430 |
tgtaaatattgtgtacataacttgtagatttgtaattagagaagagtgctctcctattgtaaggcctttagagtcatttccaacttaattgacgatttct |
15268529 |
T |
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| Q |
126 |
tttagacatgtctcattacaatttt |
150 |
Q |
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| T |
15268530 |
tttagacatgtctcattacaatttt |
15268554 |
T |
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