View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5008-Insertion-2 (Length: 1042)

Name: NF5008-Insertion-2
Description: NF5008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5008-Insertion-2
NF5008-Insertion-2
[»] scaffold0001 (2 HSPs)
scaffold0001 (7-538)||(503165-503698)
scaffold0001 (608-1042)||(502667-503095)
[»] chr2 (11 HSPs)
chr2 (604-771)||(5304914-5305079)
chr2 (717-779)||(20989195-20989256)
chr2 (725-777)||(12764319-12764370)
chr2 (717-777)||(18333334-18333393)
chr2 (716-777)||(18879409-18879469)
chr2 (717-777)||(26616936-26616995)
chr2 (717-777)||(44298620-44298679)
chr2 (717-774)||(28745939-28745994)
chr2 (723-776)||(26226810-26226862)
chr2 (709-774)||(25301859-25301923)
chr2 (691-725)||(20529063-20529097)
[»] chr8 (8 HSPs)
chr8 (607-777)||(22842568-22842735)
chr8 (718-777)||(26140930-26140988)
chr8 (717-779)||(24629294-24629355)
chr8 (717-777)||(10205356-10205415)
chr8 (739-777)||(12504248-12504286)
chr8 (729-777)||(27784225-27784271)
chr8 (694-743)||(32108202-32108251)
chr8 (495-538)||(22842465-22842508)
[»] chr7 (18 HSPs)
chr7 (604-743)||(9651620-9651759)
chr7 (775-985)||(31919451-31919663)
chr7 (717-777)||(41934711-41934771)
chr7 (717-777)||(7067444-7067504)
chr7 (717-777)||(27317202-27317261)
chr7 (717-773)||(26927075-26927130)
chr7 (693-743)||(16650754-16650804)
chr7 (693-743)||(17625114-17625164)
chr7 (691-742)||(28009437-28009488)
chr7 (741-775)||(11826574-11826608)
chr7 (677-727)||(21808720-21808770)
chr7 (694-743)||(36337799-36337848)
chr7 (717-773)||(150824-150879)
chr7 (729-777)||(23554163-23554210)
chr7 (677-719)||(21800385-21800427)
chr7 (610-660)||(21808663-21808713)
chr7 (689-725)||(12678224-12678261)
chr7 (869-930)||(22261039-22261100)
[»] chr4 (9 HSPs)
chr4 (604-743)||(13522645-13522784)
chr4 (607-743)||(12226715-12226849)
chr4 (646-743)||(44101334-44101430)
chr4 (777-933)||(25974306-25974463)
chr4 (716-777)||(20758412-20758471)
chr4 (716-777)||(20764803-20764862)
chr4 (717-775)||(25145434-25145490)
chr4 (741-775)||(24076001-24076035)
chr4 (723-777)||(23124155-23124207)
[»] chr5 (11 HSPs)
chr5 (702-777)||(16417455-16417529)
chr5 (718-777)||(6998389-6998447)
chr5 (719-777)||(10976864-10976921)
chr5 (716-777)||(15794622-15794682)
chr5 (717-777)||(31488761-31488820)
chr5 (723-777)||(19748747-19748800)
chr5 (717-779)||(36311268-36311329)
chr5 (11-107)||(20050653-20050749)
chr5 (716-777)||(25359944-25360002)
chr5 (693-743)||(26603907-26603957)
chr5 (740-776)||(31238731-31238767)
[»] chr1 (9 HSPs)
chr1 (775-985)||(20803445-20803656)
chr1 (775-985)||(20812525-20812737)
chr1 (717-779)||(48706273-48706334)
chr1 (717-777)||(11788527-11788586)
chr1 (716-777)||(19261777-19261837)
chr1 (447-531)||(12026765-12026849)
chr1 (740-777)||(15472215-15472252)
chr1 (717-777)||(22923123-22923182)
chr1 (397-435)||(12026884-12026922)
[»] chr3 (7 HSPs)
chr3 (717-777)||(43688511-43688571)
chr3 (610-713)||(20409053-20409155)
chr3 (680-776)||(4806111-4806214)
chr3 (740-775)||(50341754-50341789)
chr3 (744-777)||(1886047-1886080)
chr3 (689-732)||(29787568-29787612)
chr3 (739-777)||(773915-773953)
[»] chr6 (15 HSPs)
chr6 (777-933)||(20198392-20198549)
chr6 (777-933)||(22092415-22092572)
chr6 (717-777)||(14096412-14096471)
chr6 (717-777)||(20244966-20245025)
chr6 (717-777)||(21864197-21864256)
chr6 (717-777)||(22138950-22139009)
chr6 (717-779)||(24560596-24560657)
chr6 (717-775)||(30764327-30764384)
chr6 (716-777)||(2402757-2402817)
chr6 (693-776)||(22961743-22961833)
chr6 (693-776)||(23826560-23826650)
chr6 (694-776)||(11117008-11117097)
chr6 (741-777)||(33201156-33201192)
chr6 (716-777)||(3096896-3096956)
chr6 (716-777)||(18743347-18743407)
[»] scaffold0027 (1 HSPs)
scaffold0027 (717-777)||(37358-37414)
[»] scaffold0500 (1 HSPs)
scaffold0500 (717-761)||(3024-3067)
[»] scaffold0258 (1 HSPs)
scaffold0258 (717-777)||(9383-9442)
[»] scaffold0018 (1 HSPs)
scaffold0018 (717-777)||(122494-122553)
[»] scaffold0123 (1 HSPs)
scaffold0123 (740-775)||(36199-36234)


Alignment Details
Target: scaffold0001 (Bit Score: 414; Significance: 0; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 7 - 538
Target Start/End: Complemental strand, 503698 - 503165
Alignment:
Q  7 acttttcacccatgaggtccctttggtagatattgacaaagcatttgagttattgaaagatcccacttgtgtcaaagttgttatcaagatgtgatatctt 106  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  503698 acttttcacccatgaggtccctttggttgatattgacaaagcatttgagttattgaaagatcccacttgtgtcaaagttgttatcaagatgtgatatctt 503599  T
Q  107 tctttccatatcccagcatatttcaataaactctctcaagaaaatattagagatgttatttcggcttttttaaaattagaaattaatgtactgatcataa 206  Q
    |||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||      
T  503598 tctttccat--cccagcatatttcaataaactctc--aagaaaatattagagatgttatttcagcttttttaaaattagaaattaatgtactgatcatcg 503503  T
Q  207 ttcttgtggtttctctattctatggagaatgatgttattatgtgatcacaatcaatttctctcttttactcttgtgaaaatatgctttctcttc-nnnnn 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||          
T  503502 ttcttgtggtttctctattctatggagaatgatgttattatgtgatcacaatcaatttctctcttttattcttatgaaaatatgctttctcttctttttt 503403  T
Q  306 nnaatgacatgctttctcttctaaacggcaacatcccctat-ttggatcaaaatagcttcacaaaatctaaccttatcctcctaaaatccacagaaaatt 404  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  503402 ttaatgacatgctttctcttctaaacggcaacatcccctatattggatcaaaatagcttcacaaaatctaaccttatccccctaaaatccacagaaaatt 503303  T
Q  405 tctcttctcctaaagagaattgctcactcccccgcgtgacttaagtcatgttcgatagcatcggcatgacttaaggcactttgagttaatgtgagttaag 504  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  503302 tctcttctcctaaagagaattgctcactcccccgcgtgacttaagtcatgttcgatagcatcggcatgacttaagtcactttgagtcaacgtgagttaag 503203  T
Q  505 tcacatag----gtacaaagccaaggtgacttcagtca 538  Q
    ||||||||    |||||||||||| ||||||| |||||    
T  503202 tcacataggtacgtacaaagccaacgtgactttagtca 503165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 608 - 1042
Target Start/End: Complemental strand, 503095 - 502667
Alignment:
Q  608 ccccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatcataa 707  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||         |||||||||||||||||||||||||||    
T  503095 ccccaaacctatactatgttatgttaattttttaaaatcatgtcatgtttta-gaaacaacaat---------tcattcacgatccaaaataaatcataa 503006  T
Q  708 ctaaaaatacacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatgggggccgttctcatgccagactctcacc 807  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  503005 ctaaaaatacacaagtacacgaaatcaatttcaaaaaatacacaattttatttagttttaatttcatctatgggggtcgttctcatgccagactctcacc 502906  T
Q  808 ccatctcctttttcagcaagccatttgccctcgctttcgccggtcctccacatacattcgcgaactccacgccattaccaccgccgttaagaaatggcgt 907  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  502905 ccatctcctttttcagcaagccatttgccctcgctttcgccggtcctccacatacattcgcgaactccacgccattaccaccgccgttaagaaatggcgt 502806  T
Q  908 caatatcttctaggccacgcctttgtcatcttcacagaccatcagagcctcaacgatttgctcactcaagtcattc-aagtcctgaa-aacaaatctacc 1005  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||||||||    
T  502805 caatatcttctaggccacccctttgtcatcttcacagaccatcagagcctcaacgaactgctcactcaagtcattcaaagtcctgaacaacaaatctacc 502706  T
Q  1006 tggcc-aactcat-gggtatgactattcaatccatacaa 1042  Q
    ||||| ||||||| |||||||||||||| ||||||||||    
T  502705 tggccaaactcatggggtatgactattccatccatacaa 502667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 4e-56; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 604 - 771
Target Start/End: Original strand, 5304914 - 5305079
Alignment:
Q  604 aataccccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatc 703  Q
    |||||| ||||| || |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||    
T  5304914 aatacctcaaacatacaatatgttattttcattttttaaaagcatgtcatgtctta-gaaacaacaataacaacaatttattcatgatccaaaataaatc 5305012  T
Q  704 ataactaaaaatacacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaattt 771  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  5305013 ataactaaaaatacataagtacacgaaatcaaatcc-aaaaatacacaattttatttagctttaattt 5305079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 717 - 779
Target Start/End: Complemental strand, 20989256 - 20989195
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatg 779  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  20989256 cacaagtacacgaaatcaattc-aaaaaatacacaattttatttagttttaattttatctatg 20989195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 725 - 777
Target Start/End: Complemental strand, 12764370 - 12764319
Alignment:
Q  725 cacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12764370 cacgaaatcaattc-aaaaaatacacaattttatttagttttaatttcatcta 12764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 18333393 - 18333334
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||    
T  18333393 cacaagtacacgaaatcaattc-aaaaattatacaattttatttagttttaatttcatcta 18333334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 716 - 777
Target Start/End: Complemental strand, 18879469 - 18879409
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18879469 acacaattacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatcta 18879409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 26616936 - 26616995
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||| |||||    
T  26616936 cacaagtacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttaatcta 26616995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 44298679 - 44298620
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||| |||||||||  |||||||||||||||||||||||||||    
T  44298679 cacaagtacacaaaatcaattc-aaaaaatacgtaattttatttagttttaatttcatcta 44298620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 717 - 774
Target Start/End: Original strand, 28745939 - 28745994
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcat 774  Q
    ||||||||||| |||| ||||  |||||||||||||||||||||||||||||||||||    
T  28745939 cacaagtacacaaaataaatt--aaaaaatacacaattttatttagttttaatttcat 28745994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 723 - 776
Target Start/End: Complemental strand, 26226862 - 26226810
Alignment:
Q  723 tacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatct 776  Q
    ||||| |||||||||  |||||||||||||||||||||||||||||||||||||    
T  26226862 tacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatct 26226810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 709 - 774
Target Start/End: Original strand, 25301859 - 25301923
Alignment:
Q  709 taaaaatacacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcat 774  Q
    ||||||||||||||||| |  ||| ||||  |||||||||||||||||||||| ||||||||||||    
T  25301859 taaaaatacacaagtacgcataataaattt-aaaaaatacacaattttatttaattttaatttcat 25301923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 691 - 725
Target Start/End: Original strand, 20529063 - 20529097
Alignment:
Q  691 tccaaaataaatcataactaaaaatacacaagtac 725  Q
    ||||||||||||| |||||||||||||||||||||    
T  20529063 tccaaaataaatcctaactaaaaatacacaagtac 20529097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 6e-46; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 607 - 777
Target Start/End: Original strand, 22842568 - 22842735
Alignment:
Q  607 accccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatcata 706  Q
    ||||||||| || |||||||||| |||||||||||||  ||||| |||||||  |||||| ||||||| |||||||||||| |||  |||||||||||||    
T  22842568 accccaaacatacaatatgttattttcattttttaaag-catgtaatgtcttc-gaaacatcaataactacaattcattcatgataaaaaataaatcata 22842665  T
Q  707 actaaaaatacacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22842666 actaaaaatacacaagtacatgaaatcaattcc-aaaaatacacaattttatttagttttgatttcatcta 22842735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 718 - 777
Target Start/End: Complemental strand, 26140988 - 26140930
Alignment:
Q  718 acaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26140988 acaagtacacgaaatcaattc-aaaaaatacacaattttatttagttttaatttcatcta 26140930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 717 - 779
Target Start/End: Original strand, 24629294 - 24629355
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatg 779  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24629294 cacaagtacacgaaattaattc-aaaaaatacacaattttatttagttttaatttcatctatg 24629355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 10205415 - 10205356
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||    
T  10205415 cacaagtacacaaaatcaattc-aacaaatacacaattttatttagttttaatttcatcta 10205356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 739 - 777
Target Start/End: Original strand, 12504248 - 12504286
Alignment:
Q  739 caaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||||||||||||||||||||    
T  12504248 caaaaaatacacaattttatttagttttaatttcatcta 12504286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 729 - 777
Target Start/End: Complemental strand, 27784271 - 27784225
Alignment:
Q  729 aaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||||    
T  27784271 aaatcaattc--aaaaatacacaattttatttaattttaatttcatcta 27784225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 743
Target Start/End: Original strand, 32108202 - 32108251
Alignment:
Q  694 aaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    |||||||||  ||||||||||||||||||||| | |||||||||||||||    
T  32108202 aaaataaatattaactaaaaatacacaagtacgcaaaatcaattccaaaa 32108251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 495 - 538
Target Start/End: Original strand, 22842465 - 22842508
Alignment:
Q  495 gtgagttaagtcacataggtacaaagccaaggtgacttcagtca 538  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||    
T  22842465 gtgagttaagtcacgtaggtacaaagccaacgtgacttgagtca 22842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 3e-35; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 604 - 743
Target Start/End: Original strand, 9651620 - 9651759
Alignment:
Q  604 aataccccaaacctataatatgttatgttcatttttt-aaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaat 702  Q
    |||||||||||| || ||||||||||||||||||||| |||| |||| |||| |||| |||||| ||||||| |||| ||||||| ||||||||||||||    
T  9651620 aataccccaaacgtacaatatgttatgttcatttttttaaaagcatgccatgcctta-gaaacatcaataactacaactcattcatgatccaaaataaat 9651718  T
Q  703 cataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||||||||||||||||||||| || ||| ||||||||||    
T  9651719 cataactaaaaatacacaagtacgcgtaataaattccaaaa 9651759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 775 - 985
Target Start/End: Original strand, 31919451 - 31919663
Alignment:
Q  775 ctatgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccatt-tgccctcgctttcgccggtcctccacatacattcgcgaact 873  Q
    |||||||||| ||||| |||| | | || ||||| ||  ||||||||||||| ||||| || | |||||| |||||||||||||||||| | || ||| |    
T  31919451 ctatgggggcagttctgatgcaaaattcacaccctattgcctttttcagcaaaccattctgtcatcgcttgcgccggtcctccacatacgtccgtgaatt 31919550  T
Q  874 ccacgccattaccaccgccgttaagaaa-tggcgtcaatatcttctaggccacgcctttgtcatcttcacagaccatcagagcctcaacgatttgctcac 972  Q
     || ||||| |||||||| || || ||| ||||| |||||| | ||||| ||  | ||||||||||||||||| || ||||||||||| || ||||||||    
T  31919551 acatgccatcaccaccgcagtcaaaaaaatggcgacaatatttgctaggtcatccttttgtcatcttcacagatcaccagagcctcaaagaattgctcac 31919650  T
Q  973 tcaagtcattcaa 985  Q
     ||||| ||||||    
T  31919651 ccaagtaattcaa 31919663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 41934711 - 41934771
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  41934711 cacaagtacacgaaatcaattcaaaaaaatacacaattttatttggttttaatttcatcta 41934771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 7067504 - 7067444
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  7067504 cacaagtacacgaaatcaattaaaaaaaatacacaattttatttaattttaatttcatcta 7067444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 27317202 - 27317261
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27317202 cacaagtacacaaaatcaattc-aaaaaatacacaattttatttagttttaatttcatcta 27317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 26927130 - 26927075
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttca 773  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  26927130 cacaagtacacgaaatcaattc-aaaaaatacacagttttatttagttttaatttca 26927075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 693 - 743
Target Start/End: Original strand, 16650754 - 16650804
Alignment:
Q  693 caaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  16650754 caaaataaatcctaactaaaaatacacaagtacacaaaatcaattccaaaa 16650804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 693 - 743
Target Start/End: Original strand, 17625114 - 17625164
Alignment:
Q  693 caaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  17625114 caaaataaatcctaactaaaaatacacaagtacacaaaatcaattccaaaa 17625164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 691 - 742
Target Start/End: Complemental strand, 28009488 - 28009437
Alignment:
Q  691 tccaaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaa 742  Q
    |||||||||||||||||||||||||||| |||||| |  |||||||||||||    
T  28009488 tccaaaataaatcataactaaaaatacataagtacgcagaatcaattccaaa 28009437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 775
Target Start/End: Complemental strand, 11826608 - 11826574
Alignment:
Q  741 aaaaatacacaattttatttagttttaatttcatc 775  Q
    |||||||||||||||||||||||||||||||||||    
T  11826608 aaaaatacacaattttatttagttttaatttcatc 11826574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 677 - 727
Target Start/End: Original strand, 21808720 - 21808770
Alignment:
Q  677 caattcattcacgatccaaaataaatcataactaaaaatacacaagtacac 727  Q
    ||||||||||| ||||||||||||||||  |||||||||||| ||||||||    
T  21808720 caattcattcatgatccaaaataaatcaggactaaaaatacataagtacac 21808770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 694 - 743
Target Start/End: Original strand, 36337799 - 36337848
Alignment:
Q  694 aaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    |||||||||| |||||||||||||||||| || | |||||||||||||||    
T  36337799 aaaataaatcctaactaaaaatacacaagcacgcaaaatcaattccaaaa 36337848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 150879 - 150824
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttca 773  Q
    |||||||||||  ||||||||| | ||||||||||||| ||||||||||||||||||    
T  150879 cacaagtacacataatcaattc-agaaaatacacaattgtatttagttttaatttca 150824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 729 - 777
Target Start/End: Complemental strand, 23554210 - 23554163
Alignment:
Q  729 aaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  23554210 aaatcaattc-aaaaaatatacaattttatttagttttaattttatcta 23554163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 677 - 719
Target Start/End: Original strand, 21800385 - 21800427
Alignment:
Q  677 caattcattcacgatccaaaataaatcataactaaaaatacac 719  Q
    ||||||||||| ||||||||||||||||  |||||||||||||    
T  21800385 caattcattcatgatccaaaataaatcaacactaaaaatacac 21800427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 21808663 - 21808713
Alignment:
Q  610 ccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaa 660  Q
    |||||| || ||||||||||| |||||||||||||  ||||||||||||||    
T  21808663 ccaaacgtacaatatgttatgctcattttttaaaagaatgtcatgtcttaa 21808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 689 - 725
Target Start/End: Original strand, 12678224 - 12678261
Alignment:
Q  689 gatccaaaataaatcataac-taaaaatacacaagtac 725  Q
    |||||||||||||||||||| |||||||||||||||||    
T  12678224 gatccaaaataaatcataacttaaaaatacacaagtac 12678261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 930
Target Start/End: Original strand, 22261039 - 22261100
Alignment:
Q  869 gaactccacgccattaccaccgccgttaagaaatggcgtcaatatcttctaggccacgcctt 930  Q
    ||||| |||||||| || || ||||||||||||||||| ||||| ||| |||||||| ||||    
T  22261039 gaactacacgccatcactacagccgttaagaaatggcgccaataccttttaggccacccctt 22261100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 3e-35; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 604 - 743
Target Start/End: Original strand, 13522645 - 13522784
Alignment:
Q  604 aataccccaaacctataatatgttatgttcatttttt-aaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaat 702  Q
    |||||||||||| || ||||||||||||||||||||| |||| |||| |||| |||| |||||| ||||||| |||| ||||||| ||||||||||||||    
T  13522645 aataccccaaacgtacaatatgttatgttcatttttttaaaagcatgccatgcctta-gaaacatcaataactacaactcattcatgatccaaaataaat 13522743  T
Q  703 cataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||||||||||||||||||||| || ||| ||||||||||    
T  13522744 cataactaaaaatacacaagtacgcgtaataaattccaaaa 13522784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 607 - 743
Target Start/End: Original strand, 12226715 - 12226849
Alignment:
Q  607 accccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatcata 706  Q
    ||||||||| || ||||||||||||| ||||||||||  |||||||||||||| ||||||||||||| |||||||  |||| ||||||||||||||||||    
T  12226715 accccaaacatacaatatgttatgtttattttttaaag-catgtcatgtctta-gaaacaacaataataacaatttcttcatgatccaaaataaatcata 12226812  T
Q  707 actaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    |||||||| |||||||||| || ||| ||||||||||    
T  12226813 actaaaaaaacacaagtacgcgtaataaattccaaaa 12226849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 646 - 743
Target Start/End: Complemental strand, 44101430 - 44101334
Alignment:
Q  646 catgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||| |||| |||||    
T  44101430 catgttatgtctta-gaaacaacaataacaacaattcattcatgatccaaaataaatcataactaaaaatacacaagtacgcgtaataaatttcaaaa 44101334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 777 - 933
Target Start/End: Original strand, 25974306 - 25974463
Alignment:
Q  777 atgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccattt-gccctcgctttcgccggtcctccacatacattcgcgaactcc 875  Q
    ||||| ||||| || |||| ||| |||||||| ||| |||| |||||||| || ||| |||||||||| || ||||| ||||| |||||  | |||||||    
T  25974306 atgggcgccgtactgatgcaagattctcaccctatcgccttcttcagcaaacccttttgccctcgcttacgacggtcttccacttacatcagagaactcc 25974405  T
Q  876 acgccattaccaccgccgttaagaaatggcgtcaatatcttctaggccacgcctttgt 933  Q
    | ||||| ||||||||||| ||||||||||| |||||  | || |||||| |||||||    
T  25974406 atgccatcaccaccgccgtaaagaaatggcgccaatacttacttggccacccctttgt 25974463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 20758412 - 20758471
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20758412 acacaattacacaaaatcaatt--aaaaaatacacaattttatttagttttaatttcatcta 20758471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 20764803 - 20764862
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  20764803 acacaattacacaaaatcaatt--aaaaaatacacaattttatttagttttaatttcatcta 20764862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 25145490 - 25145434
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatc 775  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  25145490 cacaaatacacaaaatcaatt--aaaaaatacacaattttatttagttttaatttcatc 25145434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 741 - 775
Target Start/End: Complemental strand, 24076035 - 24076001
Alignment:
Q  741 aaaaatacacaattttatttagttttaatttcatc 775  Q
    |||||||||||||||||||||||||||||||||||    
T  24076035 aaaaatacacaattttatttagttttaatttcatc 24076001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 723 - 777
Target Start/End: Original strand, 23124155 - 23124207
Alignment:
Q  723 tacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||| |||||||||  ||||||||||||||||||||| ||||||| ||||||||    
T  23124155 tacacaaaatcaatt--aaaaaatacacaattttattttgttttaagttcatcta 23124207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 5e-25; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 702 - 777
Target Start/End: Original strand, 16417455 - 16417529
Alignment:
Q  702 tcataactaaaaatacacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  16417455 tcatatctaaaaatacacaagtaaacgaaatcaattccaaaa-atacacaattttatttagttttaatttcatcta 16417529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 718 - 777
Target Start/End: Original strand, 6998389 - 6998447
Alignment:
Q  718 acaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6998389 acaagtacacgaaatcaattc-aaaaaatacacaattttatttagttttaatttcatcta 6998447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 719 - 777
Target Start/End: Complemental strand, 10976921 - 10976864
Alignment:
Q  719 caagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  10976921 caagtacacgaaatcaatta-aaaaaatacacaattttatttagttttaatttcatcta 10976864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 15794622 - 15794682
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  15794622 acacaagtacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatcta 15794682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 31488820 - 31488761
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31488820 cacaagtaaacaaaatcaattc-aaaaaatacacaattttatttagttttaatttcatcta 31488761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 723 - 777
Target Start/End: Complemental strand, 19748800 - 19748747
Alignment:
Q  723 tacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19748800 tacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatcta 19748747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 717 - 779
Target Start/End: Original strand, 36311268 - 36311329
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatg 779  Q
    |||||||||||  ||||||||  ||||||||||||||||||||||||||||||||| ||||||    
T  36311268 cacaagtacacataatcaatta-aaaaaatacacaattttatttagttttaatttcttctatg 36311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 107
Target Start/End: Complemental strand, 20050749 - 20050653
Alignment:
Q  11 ttcacccatgaggtccctttggtagatattgacaaagcatttgagttattgaaagatcccacttgtgtcaaagttgttatcaagatgtgatatcttt 107  Q
    |||||||||||||| || |||| ||||||  |||||||||||||| || ||||  | || | |||||| |||||||| |||||||||||| ||||||    
T  20050749 ttcacccatgaggtaccattggcagatataaacaaagcatttgagataatgaagcaacctaattgtgtgaaagttgtaatcaagatgtgaaatcttt 20050653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 25359944 - 25360002
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  |||||||||||||||||||||| |||||||||||||||    
T  25359944 acacaattacacaaaatcaatt--aaaaaatacacaattttattta-ttttaatttcatcta 25360002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 693 - 743
Target Start/End: Original strand, 26603907 - 26603957
Alignment:
Q  693 caaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa 743  Q
    ||||||||||| |||||||||||||||||||||   |||||||||||||||    
T  26603907 caaaataaatcctaactaaaaatacacaagtacgtaaaatcaattccaaaa 26603957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 740 - 776
Target Start/End: Complemental strand, 31238767 - 31238731
Alignment:
Q  740 aaaaaatacacaattttatttagttttaatttcatct 776  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31238767 aaaaaatacacaattttatttagtttaaatttcatct 31238731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 1e-22; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 775 - 985
Target Start/End: Original strand, 20803445 - 20803656
Alignment:
Q  775 ctatgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccatt-tgccctcgctttcgccggtcctccacatacattcgcgaact 873  Q
    |||||||||| ||||| |||| | | |  ||||||||  ||||||| ||||| ||||| || |||||||| | |||||||||||||||| | || ||| |    
T  20803445 ctatgggggcagttctgatgcaaaattgacaccccattgcctttttaagcaaaccattctgtcctcgcttgcaccggtcctccacatacgtccgtgaatt 20803544  T
Q  874 ccacgccattaccaccgccgttaagaaatggcgtcaatatcttctaggccacgcctttgtcatcttcacagaccatcagagcctcaacgatttgctcact 973  Q
     || ||||| |||||||| || || |||||||| |||||| | ||||| ||  | ||||||||||||||||| || ||||||||||| || ||||||||     
T  20803545 acatgccatcaccaccgcagtcaaaaaatggcgacaatatttgctaggtcatccttttgtcatcttcacagatcaccagagcctcaaagaattgctcacc 20803644  T
Q  974 caagtcattcaa 985  Q
    ||||| ||||||    
T  20803645 caagtaattcaa 20803656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 775 - 985
Target Start/End: Original strand, 20812525 - 20812737
Alignment:
Q  775 ctatgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccatt-tgccctcgctttcgccggtcctccacatacattcgcgaact 873  Q
    |||||||||| ||||| |||| | | || ||||| ||  ||||||||||||| ||||| || | |||||| |||||||||||||||||| | || ||| |    
T  20812525 ctatgggggcagttctgatgcaaaattcacaccctattgcctttttcagcaaaccattctgtcatcgcttgcgccggtcctccacatacgtccgtgaatt 20812624  T
Q  874 ccacgccattaccaccgccgttaagaaa-tggcgtcaatatcttctaggccacgcctttgtcatcttcacagaccatcagagcctcaacgatttgctcac 972  Q
     || ||||| |||||||| || || ||| ||||| |||||| | ||||| ||  | ||||||||||||||||| || ||||||||||| || ||||||||    
T  20812625 acatgccatcaccaccgcagtcaaaaaaatggcgacaatatttgctaggtcatccttttgtcatcttcacagatcaccagagcctcaaagaattgctcac 20812724  T
Q  973 tcaagtcattcaa 985  Q
     ||||| ||||||    
T  20812725 ccaagtaattcaa 20812737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 717 - 779
Target Start/End: Original strand, 48706273 - 48706334
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatg 779  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| ||||    
T  48706273 cacaagtacacgaaaccaattc-aaaaaatacagaattttatttagttttaatttcatttatg 48706334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 11788527 - 11788586
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||| | |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  11788527 cacaagtacgcaaaatcaattt-aaaaaatacacaattttatttagttttaatttcatcta 11788586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 19261777 - 19261837
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  19261777 acacaattacacaaaatcaatta-aaacaatacacaattttatttagttttaatttcatcta 19261837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 447 - 531
Target Start/End: Complemental strand, 12026849 - 12026765
Alignment:
Q  447 aagtcatgttcgatagcatcggcatgacttaaggcactttgagttaatgtgagttaagtcacataggtacaaagccaaggtgact 531  Q
    |||||| ||||| || |||| || ||||||||| ||| |||||  || |||||||||||||| ||||||||||||||| ||||||    
T  12026849 aagtcacgttcggtaacatcagcgtgacttaagtcacattgagccaacgtgagttaagtcacgtaggtacaaagccaacgtgact 12026765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 740 - 777
Target Start/End: Complemental strand, 15472252 - 15472215
Alignment:
Q  740 aaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||| |||||||||||||||    
T  15472252 aaaaaatacacaattttatttatttttaatttcatcta 15472215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 22923123 - 22923182
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||  ||||| || ||||||||||||||||||||||| |||||    
T  22923123 cacaagtacacaaaatcaatta-aaaaattaaacaattttatttagttttaattttatcta 22923182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 397 - 435
Target Start/End: Complemental strand, 12026922 - 12026884
Alignment:
Q  397 agaaaatttctcttctcctaaagagaattgctcactccc 435  Q
    |||||||| |||||||| |||||||||||||||||||||    
T  12026922 agaaaattgctcttctcataaagagaattgctcactccc 12026884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 7e-21; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 43688571 - 43688511
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  43688571 cacaagtacacgaaatcaattcaaaaaaatgcacaattttatttagttttaatttcatcta 43688511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 610 - 713
Target Start/End: Original strand, 20409053 - 20409155
Alignment:
Q  610 ccaaacctataatatgttatgttcattttttaaaatcatgtcatgtcttaagaaacaacaataacaacaattcattcacgatccaaaataaatcataact 709  Q
    |||||| || ||| ||||||||||||||||||||| ||||||||||||| ||||  |||||||||||||||||  ||  |||||||||||| || |||||    
T  20409053 ccaaacatacaatgtgttatgttcattttttaaaagcatgtcatgtctt-agaataaacaataacaacaattccatcctgatccaaaataattcgtaact 20409151  T
Q  710 aaaa 713  Q
    ||||    
T  20409152 aaaa 20409155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 680 - 776
Target Start/End: Complemental strand, 4806214 - 4806111
Alignment:
Q  680 ttcattcacgatccaaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa------aatac-acaattttatttagttttaatttc 772  Q
    |||||||| ||||||||||||||||| ||||||||||| |||| ||  ||||| ||||||||||      ||||| |||| ||||||||||| |||||||    
T  4806214 ttcattcatgatccaaaataaatcattactaaaaatacgcaagcacgtgaaattaattccaaaataatagaatacaacaaatttatttagttataatttc 4806115  T
Q  773 atct 776  Q
    ||||    
T  4806114 atct 4806111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 740 - 775
Target Start/End: Original strand, 50341754 - 50341789
Alignment:
Q  740 aaaaaatacacaattttatttagttttaatttcatc 775  Q
    ||||||||||||||||||||||||||||||||||||    
T  50341754 aaaaaatacacaattttatttagttttaatttcatc 50341789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 744 - 777
Target Start/End: Original strand, 1886047 - 1886080
Alignment:
Q  744 aatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||||||||||||||||||||||||||    
T  1886047 aatacacaattttatttagttttaatttcatcta 1886080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 689 - 732
Target Start/End: Original strand, 29787568 - 29787612
Alignment:
Q  689 gatccaaaataaatcataac-taaaaatacacaagtacacgaaat 732  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||    
T  29787568 gatccaaaataaatcataacttaaaaatacacaagtacacaaaat 29787612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 739 - 777
Target Start/End: Original strand, 773915 - 773953
Alignment:
Q  739 caaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||| |||||||||||||||| ||||||||||||    
T  773915 caaaaaatagacaattttatttagttataatttcatcta 773953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 1e-16; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 777 - 933
Target Start/End: Complemental strand, 20198549 - 20198392
Alignment:
Q  777 atgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccattt-gccctcgctttcgccggtcctccacatacattcgcgaactcc 875  Q
    ||||| ||||| || |||| ||| |||||||| ||| |||| |||||||| || ||| |||||||||| || ||||| ||||| |||||  | |||||||    
T  20198549 atgggcgccgtactgatgcaagattctcaccctatcgccttcttcagcaaacccttttgccctcgcttacgacggtcttccacttacatcagagaactcc 20198450  T
Q  876 acgccattaccaccgccgttaagaaatggcgtcaatatcttctaggccacgcctttgt 933  Q
    | ||||| ||||||||||| ||||||||||| |||||  | || |||||| |||||||    
T  20198449 atgccatcaccaccgccgtaaagaaatggcgccaatacttacttggccacccctttgt 20198392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 777 - 933
Target Start/End: Complemental strand, 22092572 - 22092415
Alignment:
Q  777 atgggggccgttctcatgccagactctcaccccatctcctttttcagcaagccattt-gccctcgctttcgccggtcctccacatacattcgcgaactcc 875  Q
    ||||| ||||| || |||| ||| |||||||| ||| |||| |||||||| || ||| |||||||||| || ||||| ||||| |||||  | |||||||    
T  22092572 atgggcgccgtactgatgcaagattctcaccctatcgccttcttcagcaaacccttttgccctcgcttacgacggtcttccacttacatcagagaactcc 22092473  T
Q  876 acgccattaccaccgccgttaagaaatggcgtcaatatcttctaggccacgcctttgt 933  Q
    | ||||| ||||||||||| ||||||||||| |||||  | || |||||| |||||||    
T  22092472 atgccatcaccaccgccgtaaagaaatggcgccaatacttacttggccacccctttgt 22092415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 14096471 - 14096412
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||| |||||||||||||||||||||  |||||||||||||||    
T  14096471 cacaagtacacaaaatcaattc-aaaaaatacacaattttatttcattttaatttcatcta 14096412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 20245025 - 20244966
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  20245025 cacaagcacatgaaatcaattc-aataaatacacaattttatttagttttaatttcatcta 20244966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Original strand, 21864197 - 21864256
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  21864197 cacaaatacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatcta 21864256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 22139009 - 22138950
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||| ||||||||||| || |||||||||||||||||||||||||||||||||||    
T  22139009 cacaagcacatgaaatcaattc-aataaatacacaattttatttagttttaatttcatcta 22138950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 717 - 779
Target Start/End: Complemental strand, 24560657 - 24560596
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatctatg 779  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||| |||||    
T  24560657 cacaagtacacaaaaacaattt-aaaaaatacacaattttatttagttttaatttcacctatg 24560596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 30764327 - 30764384
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatc 775  Q
    ||||| ||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  30764327 cacaaatacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttcatc 30764384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 716 - 777
Target Start/End: Complemental strand, 2402817 - 2402757
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  |||||||||||||||||||||||||||||||| |||||    
T  2402817 acacaattacacaaaatcaatta-aaaaaatacacaattttatttagttttaatttgatcta 2402757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 693 - 776
Target Start/End: Original strand, 22961743 - 22961833
Alignment:
Q  693 caaaataaatcataactaaaaatacacaagtacacgaaatcaattccaa------aaaatac-acaattttatttagttttaatttcatct 776  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||||||      ||||||| | || |||||||||||||||||||||||    
T  22961743 caaaataaatcctaactaaaaatacataagtacgcaaaatcaattccaaaacaataaaatacaataaatttatttagttttaatttcatct 22961833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 693 - 776
Target Start/End: Complemental strand, 23826650 - 23826560
Alignment:
Q  693 caaaataaatcataactaaaaatacacaagtacacgaaatcaattccaa------aaaatac-acaattttatttagttttaatttcatct 776  Q
    ||||||||||| |||||||||||||| |||||| | |||||||||||||      ||||||| | || |||||||||||||||||||||||    
T  23826650 caaaataaatcctaactaaaaatacataagtacgcaaaatcaattccaaaacaataaaatacaataaatttatttagttttaatttcatct 23826560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 694 - 776
Target Start/End: Original strand, 11117008 - 11117097
Alignment:
Q  694 aaaataaatcataactaaaaatacacaagtacacgaaatcaattccaaaa-aata------cacaattttatttagttttaatttcatct 776  Q
    |||||||||||||||||||||||||||| ||| | |||| |||||||||| ||||       |||| |||||||||||||||||||||||    
T  11117008 aaaataaatcataactaaaaatacacaaatacgcaaaattaattccaaaacaatagaatgcgacaaatttatttagttttaatttcatct 11117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 741 - 777
Target Start/End: Complemental strand, 33201192 - 33201156
Alignment:
Q  741 aaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||| |||||||||||||||||||||||||||||    
T  33201192 aaaaatagacaattttatttagttttaatttcatcta 33201156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 3096896 - 3096956
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||| || |||||||||  ||| |||||| | |||||||||||||||||||||||||    
T  3096896 acacaagtatacaaaatcaatta-aaacaatacatagttttatttagttttaatttcatcta 3096956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 716 - 777
Target Start/End: Original strand, 18743347 - 18743407
Alignment:
Q  716 acacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    |||||| ||||| |||||||||  || |||||| ||||||||||||| ||||||||||||||    
T  18743347 acacaattacacaaaatcaatta-aacaaatacccaattttatttagatttaatttcatcta 18743407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 37414 - 37358
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| ||||||||    ||||| |||||||||||||||||||||||||||||||    
T  37414 cacaagtacacaaaatcaat----aaaaaaacacaattttatttagttttaatttcatcta 37358  T

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Target: scaffold0500 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 761
Target Start/End: Original strand, 3024 - 3067
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttattta 761  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  3024 cacaagtacacaaaatcaattc-aaaaaatacacaattttattta 3067  T

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Target: scaffold0258 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 9442 - 9383
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||| ||||| |||||||||  ||||| |||||||||||||||| |||||||||||||||    
T  9442 cacaaatacacaaaatcaatta-aaaaattacacaattttatttacttttaatttcatcta 9383  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 717 - 777
Target Start/End: Complemental strand, 122553 - 122494
Alignment:
Q  717 cacaagtacacgaaatcaattccaaaaaatacacaattttatttagttttaatttcatcta 777  Q
    ||||||||||| |||||||||  |||||||||| ||||||||||  |||||||||||||||    
T  122553 cacaagtacacaaaatcaatta-aaaaaatacagaattttattttattttaatttcatcta 122494  T

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Target: scaffold0123 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 775
Target Start/End: Original strand, 36199 - 36234
Alignment:
Q  740 aaaaaatacacaattttatttagttttaatttcatc 775  Q
    |||||||| |||||||||||||||||||||||||||    
T  36199 aaaaaatatacaattttatttagttttaatttcatc 36234  T

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