View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5009_high_1 (Length: 1073)

Name: NF5009_high_1
Description: NF5009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5009_high_1
NF5009_high_1
[»] chr6 (7 HSPs)
chr6 (309-877)||(31151926-31152492)
chr6 (15-231)||(22981841-22982057)
chr6 (15-231)||(23806351-23806567)
chr6 (680-877)||(22981504-22981710)
chr6 (680-877)||(23806698-23806904)
chr6 (618-801)||(1111378-1111564)
chr6 (77-166)||(1105112-1105201)
[»] chr5 (7 HSPs)
chr5 (480-877)||(33807820-33808213)
chr5 (480-877)||(33811474-33811867)
chr5 (480-877)||(33816392-33816785)
chr5 (15-322)||(33811001-33811307)
chr5 (15-322)||(33815919-33816225)
chr5 (699-794)||(16698504-16698601)
chr5 (699-794)||(22763905-22764002)
[»] chr3 (10 HSPs)
chr3 (471-877)||(50602993-50603403)
chr3 (16-270)||(54967873-54968127)
chr3 (627-878)||(54967209-54967477)
chr3 (680-879)||(44782522-44782733)
chr3 (627-794)||(39298736-39298908)
chr3 (680-796)||(18556392-18556511)
chr3 (621-725)||(31725346-31725448)
chr3 (680-865)||(54979854-54980051)
chr3 (699-798)||(17645800-17645897)
chr3 (825-877)||(17645928-17645981)
[»] chr7 (12 HSPs)
chr7 (15-323)||(4836159-4836462)
chr7 (92-270)||(24379927-24380105)
chr7 (680-877)||(4842648-4842857)
chr7 (627-878)||(25857130-25857395)
chr7 (627-877)||(4835575-4835840)
chr7 (680-796)||(13465046-13465165)
chr7 (617-786)||(8252686-8252853)
chr7 (699-794)||(27341025-27341120)
chr7 (682-803)||(17845847-17845969)
chr7 (680-794)||(24379370-24379487)
chr7 (827-877)||(24380113-24380163)
chr7 (728-794)||(38994151-38994218)
[»] chr8 (5 HSPs)
chr8 (877-1056)||(29240936-29241120)
chr8 (893-1056)||(16828482-16828651)
chr8 (627-877)||(41481548-41481815)
chr8 (627-880)||(36167547-36167816)
chr8 (683-872)||(18951129-18951326)
[»] chr1 (2 HSPs)
chr1 (662-877)||(29706854-29707069)
chr1 (702-794)||(27642132-27642225)
[»] scaffold0479 (2 HSPs)
scaffold0479 (15-270)||(2019-2274)
scaffold0479 (680-878)||(2727-2937)
[»] scaffold0045 (1 HSPs)
scaffold0045 (627-859)||(26516-26752)
[»] chr4 (4 HSPs)
chr4 (627-877)||(9757212-9757480)
chr4 (699-796)||(37286972-37287069)
chr4 (15-213)||(25003544-25003727)
chr4 (682-794)||(42682924-42683038)
[»] chr2 (2 HSPs)
chr2 (699-792)||(37037942-37038035)
chr2 (825-859)||(37038074-37038108)
[»] scaffold0003 (1 HSPs)
scaffold0003 (699-877)||(342217-342404)


Alignment Details
Target: chr6 (Bit Score: 415; Significance: 0; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 309 - 877
Target Start/End: Complemental strand, 31152492 - 31151926
Alignment:
Q  309 atgggttccagccatagtaaggcactatgagaaatgttgaaatttcttctcctacatgcctatagaaagtagcttgtggtgcttaacttcaatttgtgtc 408  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31152492 atgggttccagctatagtaaggcactatgagagatgttgaaatttcttctcctacatgcctatagaaagtagcttgcggtgcttaacttcaatttgtgtc 31152393  T
Q  409 agaagcaatttgaaagcatggcaaatggtagtacaaaagtcaaggacggtggagtatagtggttgaatgtgagaaccaagcattcaatgcttgtggttca 508  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31152392 agaagcaatttgaaagcacggcagatggtagttcaaaagtcaaggacggttgagtatagtggttgaatgtgagaaccaagcattcaatgtttgtggttca 31152293  T
Q  509 aatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacatagagttgagagaaaaatagagagttcctcata 608  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| ||  | || ||     |||||||||||||||||||||||||||| ||    
T  31152292 aatctctctataaatagagaagagcttcagcaaagca-atcacaccacaacacaa--cacaatcctcgggagttgagagaaaaatagagagttcctcgta 31152196  T
Q  609 agagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttaggtccacctgagggtgaagatttgtattccc 708  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  31152195 agagtgtgagagaaaaatatagtaagccaatttgtgagagttgtatctataaatttagatacgtagttaggtccatctgagggtgaagatttgtattccc 31152096  T
Q  709 attattattatagtggagatttaagaggcttacgggtcccgtggt-ttttccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtca 807  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  31152095 attattattatagtggagatttaagaggcctacggatcccgtggtttttttcttactcacattgagaaggttttccacattaaaattttgttgtgtgtca 31151996  T
Q  808 ttttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  31151995 ttttatgtttccgctaaagtgcctattttgagttcagagaggagggaaattatgcaggcatttcccaaca 31151926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 231
Target Start/End: Complemental strand, 22982057 - 22981841
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||| |||| |||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| || || || |||||||| || ||||||||    
T  22982057 atcaaaaaagctatgttctctattgcgacagtcagagtgcgattcatctcagcaagaactcgacataccactctagatcgaaacacattgacgtgaggta 22981958  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
     || || ||   ||||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| |||||    
T  22981957 ccactgtattaatgatgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgacaaaacctctaccaaaa 22981858  T
Q  215 gagaaaatagagttttg 231  Q
    || || || ||||||||    
T  22981857 gaaaagattgagttttg 22981841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 231
Target Start/End: Original strand, 23806351 - 23806567
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||| |||| |||||||||||||| || ||||| ||||| ||||| ||||||||||| ||||||||||| || || || |||||||| || ||||||||    
T  23806351 atcaaaaaagctatgttctctattgcgacagtcagagtgcgattcatctcagcaagaactcgacataccactctagatcgaaacacattgacgtgaggta 23806450  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
     || || ||   ||||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||||||| ||||| |||||    
T  23806451 ccactgtattaatgatgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgacaaaacctctaccaaaa 23806550  T
Q  215 gagaaaatagagttttg 231  Q
    || || || ||||||||    
T  23806551 gaaaagattgagttttg 23806567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 680 - 877
Target Start/End: Original strand, 22981504 - 22981710
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 776  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | |||||||||||||||||| || ||||||||||||||    
T  22981504 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaag 22981603  T
Q  777 gttttccacgctaaaattttgttgtgt-------gtcatttt--acgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggca 867  Q
    |||||||||||||||||| |  |||||        | |||||  |||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| ||    
T  22981604 gttttccacgctaaaattct-ctgtgtcattacgcttatttttcacgtttccgct--agtgcctgttttgagttcacggaggggggaaattatgcagtca 22981700  T
Q  868 tttcccaaca 877  Q
    ||||||||||    
T  22981701 tttcccaaca 22981710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 680 - 877
Target Start/End: Complemental strand, 23806904 - 23806698
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 776  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | |||||||||||||||||| || ||||||||||||||    
T  23806904 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaag 23806805  T
Q  777 gttttccacgctaaaattttgttgtgt-------gtcatttt--acgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggca 867  Q
    |||||||||||||||||| |  |||||        | |||||  |||||||||||  ||||||| ||||||||||||||||| ||||||||| |||| ||    
T  23806804 gttttccacgctaaaattct-ctgtgtcattacgcttatttttcacgtttccgct--agtgcctgttttgagttcacggaggggggaaattatgcagtca 23806708  T
Q  868 tttcccaaca 877  Q
    ||||||||||    
T  23806707 tttcccaaca 23806698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 618 - 801
Target Start/End: Complemental strand, 1111564 - 1111378
Alignment:
Q  618 gagaaaaatatagtgagccaatttgtgagagttgtatcta--caaattgagatacatagttaggtccacctgagggtgaagatttgtattcccattatta 715  Q
    ||||||||||||  || |||||||||||||  | ||||||  |||||||||||||||||||||||  || | ||||||||  ||||||||| ||||||||    
T  1111564 gagaaaaatataaggaaccaatttgtgagaaatatatctatacaaattgagatacatagttaggtttacgtaagggtgaaagtttgtattctcattatta 1111465  T
Q  716 ttatagtgg-agatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgttgt 801  Q
    ||||  | | ||||||||||| |||| | ||||| || |||||||||| | ||||| ||||||||||| || |||||||||||||||    
T  1111464 ttattatagtagatttaagagacttatgagtcccatgatttttccttatttacattcagaaggttttctacactaaaattttgttgt 1111378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 1105201 - 1105112
Alignment:
Q  77 acataccattcaaggtcaaaacacatcgatgtgaggtatcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaatt 166  Q
    |||||||||| ||| |||||||||||| |||| ||  ||||||| |||| ||| ||||||||||||||||||||  ||||||||||||||    
T  1105201 acataccatttaagatcaaaacacatcaatgtaagaaatcattgaatacatgacgtgttagagaataaactgctttaaatagagaaaatt 1105112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 320; Significance: 1e-180; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 480 - 877
Target Start/End: Original strand, 33807820 - 33808213
Alignment:
Q  480 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 579  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33807820 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33807917  T
Q  580 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 679  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807918 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33808017  T
Q  680 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 779  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33808018 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33808117  T
Q  780 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33808118 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33808213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 480 - 877
Target Start/End: Original strand, 33811474 - 33811867
Alignment:
Q  480 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 579  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33811474 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33811571  T
Q  580 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 679  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33811572 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33811671  T
Q  680 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 779  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33811672 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33811771  T
Q  780 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33811772 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33811867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 480 - 877
Target Start/End: Original strand, 33816392 - 33816785
Alignment:
Q  480 agaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacataatcctcactcacataga 579  Q
    ||||||||||||| |||||    |||||||| | ||||||||||||||||||| |||||||| | |   |||||||||||| ||||||||||||||||||    
T  33816392 agaaccaagcatttaatgcacacggttcaaaaccctctataaatagagaagagtttcagcaatgaaa--cacaccacaacacaatcctcactcacataga 33816489  T
Q  580 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 679  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33816490 gttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttagg 33816589  T
Q  680 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 779  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33816590 tccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggtcccgtggtttttccttactcacattgagaaggtt 33816689  T
Q  780 ttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33816690 ttccacgctaaaattttgt--tgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 33816785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 15 - 322
Target Start/End: Original strand, 33811001 - 33811307
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33811001 atcaagaaatttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 33811100  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  33811101 tcattggattcgtgatgtgttggagaataaactgctgcaaatagagaaaattcacaccaatgacaacggagcagatatgatgacaaaagctctaccaaaa 33811200  T
Q  215 gagaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggt 314  Q
    ||||| ||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |    
T  33811201 gagaagatagagttttgtaaacaagctgcaggcttggcagcaaccccaaactaatctaaggatagtttcc-ctttggctggagggggagaattgttggtt 33811299  T
Q  315 tccagcca 322  Q
    ||||||||    
T  33811300 tccagcca 33811307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 252; E-Value: 1e-139
Query Start/End: Original strand, 15 - 322
Target Start/End: Original strand, 33815919 - 33816225
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33815919 atcaagaaatttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 33816018  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  33816019 tcattggattcgtgatgtgttggagaataaactgctgcaaatagagaaaattcacaccaatgacaacggagcagatatgatgacaaaagctctaccaaaa 33816118  T
Q  215 gagaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggt 314  Q
    ||||| ||||||||||||||| | ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |    
T  33816119 gagaagatagagttttgtaaacaagctgcaggcttggcagcaaccccaaactaatctaaggatagtttcc-ctttggctggagggggagaattgttggtt 33816217  T
Q  315 tccagcca 322  Q
    ||||||||    
T  33816218 tccagcca 33816225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 794
Target Start/End: Original strand, 16698504 - 16698601
Alignment:
Q  699 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 794  Q
    ||||||||||||||| ||||||||||| | |||||||||   | ||||||| |  ||||||| || ||||||||||||||| ||||||| ||||||||    
T  16698504 ttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccataatttttccctttctcacattgagaaggatttccacactaaaatt 16698601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 699 - 794
Target Start/End: Complemental strand, 22764002 - 22763905
Alignment:
Q  699 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 794  Q
    ||||||||||||||| |||||||   | | ||||||||||  |  ||||||||||||||||| || |||| ||||||||||||||||| |||||||||    
T  22764002 ttgtattcccattatcattatagcataagttttaagaggcccaatggtcccgtggtttttccctttctcatattgagaaggttttccatgctaaaatt 22763905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 264; Significance: 1e-147; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 471 - 877
Target Start/End: Original strand, 50602993 - 50603403
Alignment:
Q  471 ttgaatgtgagaaccaagcattcaatgcttgtggttcaaatctctctataaatagagaagagcttcagcaaagcataccacaccacaacata-----atc 565  Q
    ||||| ||| |||||||||||| |||||||  ||||||  ||||||||||||||||||||||||||||||||||| || |||||||||||||     |||    
T  50602993 ttgaaagtgtgaaccaagcatttaatgcttacggttcatttctctctataaatagagaagagcttcagcaaagcaaac-acaccacaacatagcacaatc 50603091  T
Q  566 ctcactcacatagagttgagagaaaaatagagagttcctcataagagtgtgagagaaaaatatagtgagccaatttgt--gagagttgtatctacaaatt 663  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  50603092 ctcactcacacagagttgagagaaaaatagaaagttcctcataagagtg--agagaaaaatatagtgagccaatttgtatgagagttgtatctacaaatt 50603189  T
Q  664 gagatacatagttaggtccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttac 763  Q
    |||||| ||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  50603190 gagatatatagttaggtccatctaaaggtgaagatttgtattcccattattattatagtggagatttaagaggcctacgggttccgtggttttttcttac 50603289  T
Q  764 tcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagca 863  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||   |     
T  50603290 tcacattgagaaggttttccacgctaaaattttattgtgtgtcattttacgttttcgctaaagtgtctattttgagttcacggaggagagaaattgtact 50603389  T
Q  864 ggcatttcccaaca 877  Q
    ||||||||||||||    
T  50603390 ggcatttcccaaca 50603403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 16 - 270
Target Start/End: Complemental strand, 54968127 - 54967873
Alignment:
Q  16 tcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggtat 115  Q
    |||||||||||||||||||||||| || ||||| || |||||||| ||||||||||| || |||||||| || || ||||||||||| ||||||||||||    
T  54968127 tcaagaaagttatgttctctattgcgacagtcagagcgcaattcatctcagcaagaactcaacataccactccagatcaaaacacattgatgtgaggtat 54968028  T
Q  116 cattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaag 215  Q
    || ||||| ||||||||||| || | |||| || || || |||||||| ||||||||||||| || ||||||||||||||||||||||||||| ||||||    
T  54968027 cactggattcgtgatgtgttggaaagtaaattgttgaaagtagagaaagttcacaccaatgagaacggagcagatatgatgacaaaagctctaccaaaag 54967928  T
Q  216 agaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 270  Q
    |||| ||||||||||| ||| | ||||| ||  | |||||||||||||| |||||    
T  54967927 agaagatagagttttgcaaacaagctgctggattggcagcaaccccaaattaatc 54967873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 627 - 878
Target Start/End: Complemental strand, 54967477 - 54967209
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  54967477 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattata 54967378  T
Q  721 gtggagattt--aagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc----------- 806  Q
    |||||  |||  |||||||  | |||||||||||||||||| || |||| ||||||||||||||||||||||||||| | || ||||||               
T  54967377 gtggaagtttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgctttt 54967279  T
Q  807 attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaacat 878  Q
    |||| |||||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  54967278 atttcacgtttccgct--agtgcctattttgagttgacggaggagggaaattatgcaggcatttcccaacat 54967209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 680 - 879
Target Start/End: Complemental strand, 44782733 - 44782522
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 775  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | |||||||||   | ||||||||||||||||  |||| |||| ||||||||    
T  44782733 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccgtggttttttccctttctcatattgagaa 44782634  T
Q  776 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 864  Q
    ||||||||||||||||||| | || ||||||           |||| |||||||||||  |||| |||||||||||||||||||||||||||||| ||||    
T  44782633 ggttttccacgctaaaattctctt-tgtgtcattacgtttatatttcacgtttccgct--agtgtctattttgagttcacggaggagggaaattatgcag 44782537  T
Q  865 gcatttcccaacata 879  Q
    |||||||||||||||    
T  44782536 gcatttcccaacata 44782522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 627 - 794
Target Start/End: Original strand, 39298736 - 39298908
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    ||||||||||||||||||||||| ||   |||||||||||| | |||     ||||| ||||||| ||||||||| | |||||||||| |||| ||||||    
T  39298736 atagtgagccaatttgtgagagt-gtccttacaaattgagagatatattgtagttagatccacctaagggtgaagttgttgtattccctttatcattata 39298834  T
Q  721 gtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatt 794  Q
    |||||  ||||||||||  | |||||||||| |||||||||  |||||||||||||||||| ||| ||||||||    
T  39298835 gtggaagtttaagaggcacaagggtcccgtgatttttccttcatcacattgagaaggtttttcacactaaaatt 39298908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 680 - 796
Target Start/End: Complemental strand, 18556511 - 18556392
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaag 776  Q
    ||||||| ||||||||| | |||||||| |||| | |||||||||||  |||||||||||   ||||||||||||||||  |||| |||| |||||||||    
T  18556511 tccacctaagggtgaagttgttgtattctcattgtcattatagtggaagtttaagaggctcgagggtcccgtggttttttgcctttctcagattgagaag 18556412  T
Q  777 gttttccacgctaaaatttt 796  Q
    ||||||||||||||||||||    
T  18556411 gttttccacgctaaaatttt 18556392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 621 - 725
Target Start/End: Complemental strand, 31725448 - 31725346
Alignment:
Q  621 aaaaatatagtgagccaatttgtgagagttgtatctacaaattgagatacatagttaggtccacctgagggtgaagatttgtattcccattattattata 720  Q
    ||||||||||| |  |||||||||||| ||||  |||||||||||||||||| || |||||||||| || |||||||||||||||| ||||||| |||||    
T  31725448 aaaaatatagttaatcaatttgtgagaattgt--ctacaaattgagatacatcgtaaggtccacctaagtgtgaagatttgtattctcattattgttata 31725351  T
Q  721 gtgga 725  Q
     ||||    
T  31725350 ttgga 31725346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 680 - 865
Target Start/End: Complemental strand, 54980051 - 54979854
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtggagattt--aagaggcttacgggtcccgtggtttttcc-ttactcacattgagaa 775  Q
    ||||||| ||||||||| | ||||||||||||||| |||||||||||  |||  |||||||  | |||||||||||||||||| || |||| ||||||||    
T  54980051 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagtttttaagaggcccaagggtcccgtggtttttccctttctcatattgagaa 54979952  T
Q  776 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 864  Q
    ||||||||| ||||||||| | || ||||||           |||| |||||||||||  ||||| ||||||||||| ||||||||||||||||| ||||    
T  54979951 ggttttccatgctaaaattctctt-tgtgtcattacacttttatttcacgtttccgct--agtgcttattttgagttgacggaggagggaaattatgcag 54979855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 699 - 798
Target Start/End: Original strand, 17645800 - 17645897
Alignment:
Q  699 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgt 798  Q
    |||||||  |||||| |||||||||||  ||||||| ||| | | ||||||||||||||  ||  | | |||||||||||||||||||||||||||||||    
T  17645800 ttgtattgtcattatcattatagtggaagtttaagacgctcaagagtcccgtggttttttttt--ttatattgagaaggttttccacgctaaaattttgt 17645897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 825 - 877
Target Start/End: Original strand, 17645928 - 17645981
Alignment:
Q  825 agtgcctattttgagttcacggaggagggaaattaagcagg-catttcccaaca 877  Q
    |||| |||||||||||||||||| ||||||||||| | ||| ||||||||||||    
T  17645928 agtgtctattttgagttcacggatgagggaaattatggaggtcatttcccaaca 17645981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 15 - 323
Target Start/End: Complemental strand, 4836462 - 4836159
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4836462 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 4836363  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||| | ||| | |||    
T  4836362 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacacaaatgagaatggagcagacatgatgacaaaaccgctaccgaaa 4836263  T
Q  215 gagaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatctaaggatagtttcctctttggctggagggggagaattgatgggt 314  Q
    ||||| ||||||||||| ||| | ||||| || || | ||||||||||||||||| |||||     |||| || |||||||||||||||||||| ||||     
T  4836262 gagaagatagagttttgcaaacaagctgctggaatggtagcaaccccaaactaat-taagg---cattcccctatggctggagggggagaattg-tgggg 4836168  T
Q  315 tccagccat 323  Q
    |||||||||    
T  4836167 tccagccat 4836159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 92 - 270
Target Start/End: Complemental strand, 24380105 - 24379927
Alignment:
Q  92 tcaaaacacatcgatgtgaggtatcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagata 191  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||| |||| |||| || || || |||||||| ||||||||||| | |||||||| || |    
T  24380105 tcaaaacacaatgatgtgaggtatcactggattcgtgatgtgttggagagtaaattgttgaaagtagagaaagttcacaccaataagaatggagccgaca 24380006  T
Q  192 tgatgacaaaagctctatcaaaagagaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 270  Q
    ||||||||||| |||||||||||||||| ||||||||||| ||| | ||||| ||  | ||||||||||||||||||||    
T  24380005 tgatgacaaaacctctatcaaaagagaagatagagttttgcaaacaagctgctggattggcagcaaccccaaactaatc 24379927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 680 - 877
Target Start/End: Complemental strand, 4842857 - 4842648
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 775  Q
    ||||||| ||||||||| | ||||||||| ||||| ||||||||||| | ||||||||||  | |||||| |||||||||  |||| |||||||||||||    
T  4842857 tccacctaagggtgaagttgttgtattcctattatcattatagtggaagttttaagaggcccaagggtcctgtggttttttccctttctcacattgagaa 4842758  T
Q  776 ggttttccacgctaaaattttgttgtgtgtcatt-----------ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 864  Q
    ||||||||||||||||||| | || |||||||||           | ||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  4842757 ggttttccacgctaaaattctctt-tgtgtcattacacttatatttcacgtttccgcta--gtgcctattttgagttcacggaggagggaaattatgcag 4842661  T
Q  865 gcatttcccaaca 877  Q
    |||||||||||||    
T  4842660 gcatttcccaaca 4842648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 627 - 878
Target Start/End: Complemental strand, 25857395 - 25857130
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaatt--gagatacat---agttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   ||||||||  |||||| ||   ||| || ||||||| | ||||||| | ||||||||||||||| ||||||    
T  25857395 atagtgagccaatttgtgagagtgttccttacaaattaagagatatattgtagtgagatccacctaaaggtgaagttgttgtattcccattatcattata 25857296  T
Q  721 gtgga-gatttaagaggcttacgggtcccgtggtttttcctta-ctcacattgagaaggttttccacgctaaaattttgttgtgtgtc-----------a 807  Q
    ||||| | ||||||||||  | ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    | ||||||           |    
T  25857295 gtggaagttttaagaggcccaagggtcccgtggtttttccttttctcacattgagaaggttttccacgctaaaatt---ctctgtgtcattacgcttata 25857199  T
Q  808 ttttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaacat 878  Q
    ||| |||||||||||  |||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  25857198 tttcacgtttccgct--agtgcctattttaagttcacggaggagggaaattatgcaggcatttcccaacat 25857130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 627 - 877
Target Start/End: Complemental strand, 4835840 - 4835575
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||| ||||||||||| ||||||    
T  4835840 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgcattcccattatcattata 4835741  T
Q  721 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgt-tgt------gtgt-catt 809  Q
    ||||| | ||||||||||  | ||||||||||||||||  |||| |||||||||||||||||||||||||||||||| | | |||      || |  |||    
T  4835740 gtggaagttttaagaggcccaagggtcccgtggttttttccctttctcacattgagaaggttttccacgctaaaattctctgtgtcattacgtttatatt 4835641  T
Q  810 ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    | |||||||| ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4835640 tcacgtttccact--agtgcctattttgagttcatggaggagggaaattatgcaggcatttcccaaca 4835575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 680 - 796
Target Start/End: Complemental strand, 13465165 - 13465046
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 776  Q
    ||||||||||||||||  | ||||||||||||||| ||||||||||| | ||||||||||  | |||||| ||||||||||| || ||||||||||||||    
T  13465165 tccacctgagggtgaacttgttgtattcccattatcattatagtggatgttttaagaggcccaagggtcctgtggtttttccctttctcacattgagaag 13465066  T
Q  777 gttttccacgctaaaatttt 796  Q
    ||||||||||||||||||||    
T  13465065 gttttccacgctaaaatttt 13465046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 617 - 786
Target Start/End: Complemental strand, 8252853 - 8252686
Alignment:
Q  617 agagaaaaatatagtgagccaatttgtgagagttgtatctacaaattgagataca----tagttaggtccacctgagggtgaagatttgtattcccatta 712  Q
    |||||||||||||||||| |||||| ||| |||||||||||||||||||||||||    || ||| ||||| || | | ||||| ||||||||||| |||    
T  8252853 agagaaaaatatagtgagtcaatttatgatagttgtatctacaaattgagatacataattaattaagtccatctaaagatgaagctttgtattcccgtta 8252754  T
Q  713 ttattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacg 786  Q
    |||||| | ||  || ||||||| |||||| ||||||      | |||||||||| ||||||||||||||||||    
T  8252753 ttattacattgaggagttaagagacttacgagtcccg------taccttactcacgttgagaaggttttccacg 8252686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 699 - 794
Target Start/End: Complemental strand, 27341120 - 27341025
Alignment:
Q  699 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatt 794  Q
    ||||||| ||||||| ||| |||| ||  |||||||||   | |||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  27341120 ttgtatttccattatcattgtagtagaagtttaagaggtacaagggtcccgtggtttttcctttcttacattgagaaggttttccacgctaaaatt 27341025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 682 - 803
Target Start/End: Original strand, 17845847 - 17845969
Alignment:
Q  682 cacctgagggtgaagat-ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttt 780  Q
    ||||| ||||||||| | ||||||| ||||||| |||||||||||  |||||||||   |  ||||| ||||||||||||| ||||||||| ||||||||    
T  17845847 cacctaagggtgaagttgttgtatttccattatcattatagtggaagtttaagaggtccaaaggtcctgtggtttttccttcctcacattgggaaggttt 17845946  T
Q  781 tccacgctaaaattttgttgtgt 803  Q
    ||||| |||||||| | ||||||    
T  17845947 tccactctaaaattctcttgtgt 17845969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 680 - 794
Target Start/End: Complemental strand, 24379487 - 24379370
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaag 776  Q
    ||||||| ||||||||| | ||||||||| ||||| ||||||||||| | ||||||||||  |  | ||||||||||||||| || ||||||||||||||    
T  24379487 tccacctaagggtgaagttgttgtattcctattatcattatagtggaagttttaagaggcccaaagatcccgtggtttttccctttctcacattgagaag 24379388  T
Q  777 gttttccacgctaaaatt 794  Q
    |||||||||| |||||||    
T  24379387 gttttccacgttaaaatt 24379370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 827 - 877
Target Start/End: Original strand, 24380113 - 24380163
Alignment:
Q  827 tgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  24380113 tgcctattttgagttcacagaggagggaaattatgcaggcatttcccaaca 24380163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 728 - 794
Target Start/End: Complemental strand, 38994218 - 38994151
Alignment:
Q  728 tttaagaggcttacgggtcccgtggtttttcc-ttactcacattgagaaggttttccacgctaaaatt 794  Q
    |||||||||||   |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  38994218 tttaagaggctcgagggtcccgtggtttttccctttctcgcattgagaaggttttccacgttaaaatt 38994151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 4e-78; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 4e-78
Query Start/End: Original strand, 877 - 1056
Target Start/End: Complemental strand, 29241120 - 29240936
Alignment:
Q  877 atattcgtctacatttagaactgacaggatgagtctttggagcagctacgaaatcacttttttattagaaccccacccatctcttcttcgtttgccgtct 976  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29241120 atattcgtctacgtttagaactgacaggatgagtctttggatcagctacgaaatcacttttttattagaaccccacccatctcttcttcgtttgtcgtct 29241021  T
Q  977 gcttcctcctctgaatttggctcgctagcttgccctaaattgctggataaagaggcactt-----cggatttctgcattggttgt 1056  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||    
T  29241020 gcttcctcctctgaattaggctcgctagcttgccctaaattgctggataaagaggcacttaaacccggatttctgcattggttgt 29240936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 893 - 1056
Target Start/End: Complemental strand, 16828651 - 16828482
Alignment:
Q  893 agaactgacaggatgagtctttggagcagctacgaaatcactttttt-attagaaccccacccatctcttcttcgtttgccgtctgcttcctcctctgaa 991  Q
    ||||||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||||||||||||||| || | | || |||||||||||||||    
T  16828651 agaactgacaggatgagcctttggagcagctgagaaatcactttttttattagaaccccacccatctcttcttctttggtcttccgcttcctcctctgaa 16828552  T
Q  992 tttggctcgctagcttgccctaaattgctggataaagaggcactt-----cggatttctgcattggttgt 1056  Q
    ||||||||||||||||||||| | |||||||||||||||||||||     ||||||||||||||||||||    
T  16828551 tttggctcgctagcttgccctgatttgctggataaagaggcacttaaacccggatttctgcattggttgt 16828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 627 - 877
Target Start/End: Original strand, 41481548 - 41481815
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  41481548 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattgtagtgagatccacctaagggtgaagttgttgtattcccattatcattata 41481647  T
Q  721 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc----------- 806  Q
    ||||| | ||||||||||  | ||||||||||||||||  |||| |||| ||||||||||||||||||||||||||| | || ||||||               
T  41481648 gtggaagttttaagaggcccaagggtcccgtggttttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgtttat 41481746  T
Q  807 attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    |||| |||||||||||  |||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  41481747 atttcacgtttccgct--agtgtctattttgagttcacggaggagggaaattatgcaggcatttcccaaca 41481815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 627 - 880
Target Start/End: Original strand, 36167547 - 36167816
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  36167547 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtattcccattatcattata 36167646  T
Q  721 gtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtcatt-------- 809  Q
    ||||| | ||||||||||  | |||||| |||||||||  |||| |||| ||||||||||||||||||||||||||| | || |||||||||            
T  36167647 gtggaagttttaagaggcccaagggtcc-gtggttttttccctttctcatattgagaaggttttccacgctaaaattctctt-tgtgtcattacgtttat 36167744  T
Q  810 ---ttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaacatat 880  Q
       | ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36167745 atttcacgtttccgcta--gtgcctattttgagttcacggaggagggaaattatgcaggcatttcccaacatat 36167816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 683 - 872
Target Start/End: Complemental strand, 18951326 - 18951129
Alignment:
Q  683 acctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaaggt 778  Q
    |||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||| ||  |  |||| ||||||||||  |||| ||||||||||||||||    
T  18951326 acctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaagcccaaaggtctcgtggttttttccctttctcacattgagaaggt 18951227  T
Q  779 tttccacgctaaaattttgttgtgtgtc------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcc 872  Q
    |||||| ||||||||| |||    |  |      |||| | |||||||||  |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  18951226 tttccatgctaaaattctgtgtcattacgcttatatttcatgtttccgct--agtgcctattttgagttcacggaggaggcaaattatgcaggcatttcc 18951129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 8e-61; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 8e-61
Query Start/End: Original strand, 662 - 877
Target Start/End: Complemental strand, 29707069 - 29706854
Alignment:
Q  662 ttgagatacatagttaggtccacctgagggtgaagatttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttcctt 761  Q
    |||||||||||||||||||||||| |||||||||||||| |  | ||||||||||||||||||||||||||||||  || | |||||||| || ||||||    
T  29707069 ttgagatacatagttaggtccacccgagggtgaagattttttattccattattattatagtggagatttaagaggtctatgagtcccgtgattgttcctt 29706970  T
Q  762 actcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaag 861  Q
    ||||| |||||||||||||||| | ||||||||||||||||||||||||||| |||  |||||||||| |||||| |||||||||| ||| ||||||| |    
T  29706969 actcatattgagaaggttttcctcactaaaattttgttgtgtgtcattttacatttttgctaaagtgcatattttaagttcacggatgagagaaattatg 29706870  T
Q  862 caggcatttcccaaca 877  Q
     |||||||| ||||||    
T  29706869 gaggcattttccaaca 29706854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 702 - 794
Target Start/End: Original strand, 27642132 - 27642225
Alignment:
Q  702 tattcccattattattatagtggagatttaagaggcttacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaatt 794  Q
    ||||||||||||||||||||||||  |||||||| |    ||  |||||| ||||| |||| ||||||||||||||||||| ||||| ||||||    
T  27642132 tattcccattattattatagtggaagtttaagagacccgaggaccccgtgattttttcctttctcacattgagaaggttttacacgccaaaatt 27642225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 108; Significance: 1e-53; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 15 - 270
Target Start/End: Original strand, 2019 - 2274
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    |||||||||| |||||||||||||| || |||||||| || ||||| ||||||||||| || ||||| || || || |||||||| || |||||||||||    
T  2019 atcaagaaagctatgttctctattgcgacagtcaaagcgcgattcatctcagcaagaactcaacatatcactccagatcaaaacatattgatgtgaggta 2118  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaaa 214  Q
    ||| ||||| ||||||||||| |||| |||| || || || |||||||| ||||||||||||| ||||||||||| |||||||| ||| ||||| |||||    
T  2119 tcactggattcgtgatgtgttggagagtaaattgttgaaagtagagaaagttcacaccaatgagaatggagcagacatgatgaccaaacctctaccaaaa 2218  T
Q  215 gagaaaatagagttttgtaaagaggctgcaggcatagcagcaaccccaaactaatc 270  Q
    ||||| || |||||||| ||| | ||||| ||  | ||||||||||||||||||||    
T  2219 gagaagattgagttttgcaaacaagctgctggattggcagcaaccccaaactaatc 2274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 680 - 878
Target Start/End: Original strand, 2727 - 2937
Alignment:
Q  680 tccacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttttt--ccttactcacattgagaa 775  Q
    ||||||| ||||||||| | ||||||||||||||| ||||||||||| | ||||||||||  | ||||||||||||||||  |||| |||||||||||||    
T  2727 tccacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggcccaagggtcccgtggttttttccctttctcacattgagaa 2826  T
Q  776 ggttttccacgctaaaattttgttgtgtgtc-----------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcag 864  Q
    ||||||||||||||||||| | || ||||||           |||| |||||||||||  |||| ||||||||||||||||||| |||||||||| |||     
T  2827 ggttttccacgctaaaattctctt-tgtgtcattacgcttatatttcacgtttccgct--agtgtctattttgagttcacggagaagggaaattatgcat 2923  T
Q  865 gcatttcccaacat 878  Q
    ||||||||||||||    
T  2924 gcatttcccaacat 2937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 627 - 859
Target Start/End: Complemental strand, 26752 - 26516
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagataca-----tagttaggtccacctgagggtgaag-atttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |     |||| || ||||||| |||||| || | |||||||| | |||| |||| |    
T  26752 atagtgagccaatttgtgagagtgttccttacaaattgagagataaattgtagtgagatccacctaagggtggagtagttgtattctcgttatcattaga 26653  T
Q  721 gtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtcattttacgtttccg 820  Q
    |||||  ||||||||||  | ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||  |||| ||||||||||| ||    
T  26652 gtggaagtttaagaggcccaagggtcccgtagtttttccttactcacattgaaaaggttttccaccctaaaattttgtt--gtgttattttacgttttcg 26555  T
Q  821 ctaaagtgcctattttgagttcacggaggagggaaatta 859  Q
    |||||||| |||||||||||||||| |||||||| ||||    
T  26554 ctaaagtgtctattttgagttcacgaaggagggagatta 26516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 2e-30; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 627 - 877
Target Start/End: Complemental strand, 9757480 - 9757212
Alignment:
Q  627 atagtgagccaatttgtgagagttgtatctacaaattgagatacata-----gttaggtccacctgagggtgaagat-ttgtattcccattattattata 720  Q
    |||||||||||||||||||||||  |   |||||||||||| | |||     || || ||||||| ||||||||| | ||||||||||||||| ||||||    
T  9757480 atagtgagccaatttgtgagagtgttccttacaaattgagagatatattatagtgagatccacctaagggtgaagttgttgtattcccattatcattata 9757381  T
Q  721 gtgga---gatttaagaggcttacgggtcccgtggttttt-ccttactcacattgagaaggttttccacgctaaaattttgttgtgtgtc---------- 806  Q
    |||||     ||||||||||  | |||||||||||||||| |||| |||||||||||||||||||||||||||||||| | || ||||||              
T  9757380 gtggaagttttttaagaggcccaagggtcccgtggtttttccctttctcacattgagaaggttttccacgctaaaattctctt-tgtgtcattacgctta 9757282  T
Q  807 -attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
     |||| |||||||||||  |||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  9757281 tatttcacgtttccgct--agtgcctattttgagttcacggaggaaggaaattatgcaggcatttaccaaca 9757212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 699 - 796
Target Start/End: Complemental strand, 37287069 - 37286972
Alignment:
Q  699 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaatttt 796  Q
    ||||||||  |||||||||||||||||  ||||||| ||||| |||||||||| |||||||||  ||||||||||||||||||||| |||||||||||    
T  37287069 ttgtattcttattattattatagtggaagtttaagatgcttaagggtcccgtgatttttcctttttcacattgagaaggttttccatgctaaaatttt 37286972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 15 - 213
Target Start/End: Complemental strand, 25003727 - 25003544
Alignment:
Q  15 atcaagaaagttatgttctctattgtgatagtcaaagtgcaattcacctcagcaagaattcgacataccattcaaggtcaaaacacatcgatgtgaggta 114  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||||||| || || |||||||| || |||||||| |||||||| |||||||||||    
T  25003727 atcaacaaagttatgttccctattgtgatagtcaaagtgcaattcacctcagaaataactcgacata-caatcaaggtc-aaacacatagatgtgaggta 25003630  T
Q  115 tcattggatacgtgatgtgttagagaataaactgctgcaaatagagaaaattcacaccaatgacaatggagcagatatgatgacaaaagctctatcaaa 213  Q
             | |||||||||||||||| | ||| ||||||| ||||||||   ||||| ||||||| ||  || |||||||||||||| ||||| ||||    
T  25003629 ---------atgtgatgtgttagagaa-agactactgcaaaaagagaaaa---acaccgatgacaaagggacaaatatgatgacaaaaactctaccaaa 25003544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 682 - 794
Target Start/End: Complemental strand, 42683038 - 42682924
Alignment:
Q  682 cacctgagggtgaagat-ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggtt 779  Q
    ||||| ||||||||| | ||||||||||||||| ||||||||||| | |||||||||   | |||||||||| ||||||||| |||||||||||||||||    
T  42683038 cacctaagggtgaagttgttgtattcccattatcattatagtggaagttttaagaggtccaagggtcccgtgatttttcctttctcacattgagaaggtt 42682939  T
Q  780 ttccacgctaaaatt 794  Q
    ||||||||| |||||    
T  42682938 ttccacgctgaaatt 42682924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 699 - 792
Target Start/End: Original strand, 37037942 - 37038035
Alignment:
Q  699 ttgtattcccattattattatagtggagatttaagaggcttacgggtcccgtggtttttccttactcacattgagaaggttttccacgctaaaa 792  Q
    |||||||| ||||||  |||||||| |  ||||||||||  | |||||||||||||| ||||| ||||||||||||||||||||| ||||||||    
T  37037942 ttgtattctcattatcgttatagtgaaagtttaagaggcccaagggtcccgtggtttctcctttctcacattgagaaggttttcctcgctaaaa 37038035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 825 - 859
Target Start/End: Original strand, 37038074 - 37038108
Alignment:
Q  825 agtgcctattttgagttcacggaggagggaaatta 859  Q
    ||||||||||||||||||||||||||| |||||||    
T  37038074 agtgcctattttgagttcacggaggagagaaatta 37038108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 699 - 877
Target Start/End: Complemental strand, 342404 - 342217
Alignment:
Q  699 ttgtattcccattattattatagtgga-gatttaagaggcttacgggtcccgtggttt-ttcc-ttactcacattgagaaggttttccacgctaaaattt 795  Q
    ||||||||||||||| ||||||||||| | ||||||||||  | || ||||||||||| |||| || |||| |||||||||||||| ||||||||||||     
T  342404 ttgtattcccattatcattatagtggaagttttaagaggcccaaggatcccgtggtttcttccatttctcatattgagaaggtttttcacgctaaaattc 342305  T
Q  796 tgttgtgtgtc---------attttacgtttccgctaaagtgcctattttgagttcacggaggagggaaattaagcaggcatttcccaaca 877  Q
    | ||||||            |||| ||||||| ||||  ||||||||||||||||||||||||||| |||||| |||||||||| ||||||    
T  342304 t-ttgtgtcattacgcttatatttcacgtttctgcta--gtgcctattttgagttcacggaggaggaaaattatgcaggcattttccaaca 342217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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