View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5009_low_11 (Length: 291)

Name: NF5009_low_11
Description: NF5009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5009_low_11
NF5009_low_11
[»] chr5 (36 HSPs)
chr5 (57-175)||(35660569-35660687)
chr5 (57-175)||(37266728-37266846)
chr5 (57-181)||(18625375-18625499)
chr5 (57-175)||(11775790-11775908)
chr5 (57-171)||(4895699-4895813)
chr5 (57-175)||(13032115-13032233)
chr5 (57-175)||(32129577-32129695)
chr5 (57-175)||(14349800-14349918)
chr5 (57-180)||(34827189-34827312)
chr5 (57-175)||(40753122-40753240)
chr5 (57-180)||(39902412-39902535)
chr5 (57-163)||(8440943-8441049)
chr5 (64-174)||(29340999-29341108)
chr5 (65-175)||(43309113-43309223)
chr5 (63-174)||(3057419-3057529)
chr5 (57-155)||(3057135-3057232)
chr5 (57-140)||(36290599-36290682)
chr5 (57-118)||(4592797-4592858)
chr5 (63-172)||(18653364-18653472)
chr5 (67-139)||(27428877-27428949)
chr5 (57-174)||(32793371-32793487)
chr5 (57-140)||(41660103-41660186)
chr5 (57-103)||(28142807-28142853)
chr5 (64-174)||(31653039-31653148)
chr5 (57-133)||(2984392-2984468)
chr5 (57-140)||(3041302-3041386)
chr5 (63-127)||(43222129-43222193)
chr5 (64-174)||(31546490-31546599)
chr5 (115-172)||(9460599-9460655)
chr5 (183-223)||(38760835-38760875)
chr5 (57-180)||(10361970-10362092)
chr5 (63-173)||(35650321-35650430)
chr5 (107-152)||(1475638-1475683)
chr5 (57-130)||(17247403-17247476)
chr5 (63-129)||(32316509-32316571)
chr5 (63-127)||(9465746-9465810)
[»] chr2 (38 HSPs)
chr2 (57-175)||(35316822-35316940)
chr2 (57-175)||(13238678-13238796)
chr2 (57-175)||(28564889-28565007)
chr2 (57-175)||(23259447-23259565)
chr2 (57-175)||(11864874-11864984)
chr2 (91-175)||(45625039-45625123)
chr2 (60-174)||(2063353-2063467)
chr2 (57-140)||(374990-375073)
chr2 (57-140)||(8988852-8988935)
chr2 (57-140)||(23459841-23459924)
chr2 (57-171)||(4446860-4446974)
chr2 (100-173)||(40640709-40640783)
chr2 (65-133)||(30709115-30709183)
chr2 (57-155)||(21454476-21454572)
chr2 (64-174)||(38397085-38397194)
chr2 (57-174)||(19908777-19908892)
chr2 (64-168)||(36929720-36929823)
chr2 (64-167)||(15709772-15709874)
chr2 (68-140)||(13780506-13780579)
chr2 (68-153)||(19905889-19905973)
chr2 (63-172)||(30857642-30857750)
chr2 (1-38)||(35029894-35029931)
chr2 (57-174)||(35315499-35315615)
chr2 (57-174)||(36758823-36758939)
chr2 (57-140)||(29188650-29188734)
chr2 (64-167)||(35315257-35315359)
chr2 (100-174)||(38824065-38824140)
chr2 (68-140)||(3594865-3594938)
chr2 (68-140)||(40254144-40254217)
chr2 (139-175)||(32009935-32009971)
chr2 (1-37)||(39063805-39063841)
chr2 (63-173)||(373127-373236)
chr2 (106-172)||(22061433-22061498)
chr2 (68-133)||(41435205-41435271)
chr2 (1-37)||(6205456-6205492)
chr2 (68-136)||(28029834-28029901)
chr2 (57-133)||(31618769-31618845)
chr2 (122-174)||(36758675-36758726)
[»] chr4 (52 HSPs)
chr4 (57-180)||(19901873-19901996)
chr4 (57-175)||(34778418-34778536)
chr4 (57-175)||(56558276-56558394)
chr4 (57-180)||(3952125-3952248)
chr4 (57-180)||(5416421-5416543)
chr4 (57-175)||(12312435-12312554)
chr4 (57-175)||(5763122-5763240)
chr4 (57-175)||(23610639-23610757)
chr4 (57-175)||(33247090-33247208)
chr4 (57-181)||(18206994-18207118)
chr4 (57-167)||(30567898-30568008)
chr4 (61-175)||(24073617-24073731)
chr4 (57-175)||(33262512-33262630)
chr4 (57-175)||(38079680-38079798)
chr4 (57-175)||(39862514-39862632)
chr4 (91-175)||(12153185-12153269)
chr4 (57-174)||(47922327-47922445)
chr4 (91-180)||(52018794-52018883)
chr4 (64-174)||(23474115-23474224)
chr4 (58-140)||(56269071-56269153)
chr4 (63-172)||(1871280-1871388)
chr4 (111-181)||(33524313-33524383)
chr4 (184-274)||(50382516-50382606)
chr4 (57-162)||(47922052-47922153)
chr4 (57-139)||(56453816-56453898)
chr4 (63-170)||(34927488-34927596)
chr4 (57-140)||(5524444-5524527)
chr4 (57-140)||(37002246-37002329)
chr4 (63-140)||(36688183-36688260)
chr4 (57-140)||(42010114-42010197)
chr4 (63-152)||(26428971-26429061)
chr4 (57-109)||(31862246-31862298)
chr4 (64-172)||(13493276-13493385)
chr4 (58-140)||(1015849-1015931)
chr4 (57-103)||(12241440-12241486)
chr4 (57-174)||(48914480-48914596)
chr4 (57-127)||(48084533-48084603)
chr4 (68-140)||(17493010-17493083)
chr4 (68-140)||(32146510-32146583)
chr4 (57-174)||(36532623-36532738)
chr4 (68-140)||(46238974-46239047)
chr4 (63-172)||(50483520-50483628)
chr4 (68-140)||(53526096-53526169)
chr4 (68-140)||(55160365-55160438)
chr4 (68-133)||(25219003-25219070)
chr4 (65-125)||(40215455-40215515)
chr4 (109-172)||(33841768-33841830)
chr4 (57-119)||(25442190-25442252)
chr4 (1-39)||(31414880-31414918)
chr4 (1-31)||(32159554-32159584)
chr4 (91-140)||(5361457-5361506)
chr4 (1-37)||(44516785-44516821)
[»] chr6 (31 HSPs)
chr6 (57-175)||(4804445-4804563)
chr6 (57-175)||(13089709-13089827)
chr6 (57-174)||(12412634-12412751)
chr6 (57-175)||(17944159-17944277)
chr6 (57-175)||(21159329-21159447)
chr6 (57-175)||(1249108-1249224)
chr6 (57-175)||(7162081-7162199)
chr6 (57-175)||(27826535-27826653)
chr6 (183-273)||(32818000-32818090)
chr6 (57-175)||(227523-227642)
chr6 (100-180)||(32737897-32737977)
chr6 (57-183)||(13888474-13888601)
chr6 (57-140)||(24484876-24484959)
chr6 (91-174)||(1516168-1516250)
chr6 (91-174)||(1518257-1518339)
chr6 (64-171)||(7215816-7215923)
chr6 (57-117)||(29698160-29698220)
chr6 (57-172)||(2800574-2800689)
chr6 (214-273)||(14495955-14496014)
chr6 (100-174)||(1515503-1515576)
chr6 (57-167)||(30460817-30460930)
chr6 (57-133)||(32254033-32254109)
chr6 (57-140)||(2142288-2142371)
chr6 (64-174)||(17828530-17828639)
chr6 (110-167)||(28696624-28696680)
chr6 (68-140)||(7098190-7098263)
chr6 (68-140)||(7545645-7545718)
chr6 (115-171)||(29229149-29229204)
chr6 (63-98)||(2720376-2720411)
chr6 (63-129)||(12734413-12734478)
chr6 (184-226)||(19757126-19757168)
[»] chr7 (39 HSPs)
chr7 (57-181)||(21151149-21151273)
chr7 (57-180)||(9559009-9559132)
chr7 (57-175)||(16366515-16366633)
chr7 (57-175)||(4888464-4888582)
chr7 (57-175)||(18198253-18198371)
chr7 (57-175)||(45260387-45260505)
chr7 (57-175)||(44647959-44648079)
chr7 (57-175)||(12139323-12139442)
chr7 (57-175)||(47226036-47226152)
chr7 (57-168)||(7362565-7362676)
chr7 (57-171)||(25084690-25084806)
chr7 (57-174)||(33450503-33450621)
chr7 (183-273)||(43637918-43638008)
chr7 (183-273)||(46459471-46459561)
chr7 (57-174)||(47500243-47500361)
chr7 (57-171)||(34985909-34986024)
chr7 (63-171)||(989132-989239)
chr7 (57-174)||(39855775-39855891)
chr7 (58-161)||(32915954-32916056)
chr7 (102-175)||(47271108-47271180)
chr7 (57-140)||(47799895-47799978)
chr7 (63-171)||(29631051-29631156)
chr7 (63-167)||(33608845-33608949)
chr7 (63-130)||(46802336-46802403)
chr7 (57-140)||(30588532-30588615)
chr7 (68-133)||(19027685-19027751)
chr7 (68-133)||(20726885-20726951)
chr7 (58-140)||(28528549-28528631)
chr7 (68-140)||(14696752-14696825)
chr7 (57-140)||(19889029-19889112)
chr7 (68-140)||(30102501-30102574)
chr7 (75-140)||(35737128-35737193)
chr7 (204-273)||(41988520-41988589)
chr7 (85-133)||(29844316-29844364)
chr7 (65-140)||(47080433-47080509)
chr7 (64-174)||(7712329-7712438)
chr7 (57-127)||(32916166-32916236)
chr7 (63-127)||(676030-676094)
chr7 (63-115)||(23142567-23142619)
[»] chr8 (29 HSPs)
chr8 (57-180)||(30426624-30426747)
chr8 (57-175)||(28069716-28069834)
chr8 (57-181)||(10672468-10672590)
chr8 (59-175)||(36991355-36991471)
chr8 (57-175)||(40695208-40695325)
chr8 (58-175)||(10652577-10652694)
chr8 (57-175)||(44859129-44859245)
chr8 (57-171)||(41511259-41511373)
chr8 (57-174)||(45113267-45113385)
chr8 (59-143)||(24102015-24102099)
chr8 (57-175)||(28318856-28318980)
chr8 (118-175)||(5033310-5033367)
chr8 (57-174)||(37966405-37966520)
chr8 (57-140)||(26749543-26749626)
chr8 (57-174)||(6014191-6014309)
chr8 (58-130)||(34612562-34612634)
chr8 (57-155)||(42761710-42761808)
chr8 (91-144)||(12177572-12177625)
chr8 (91-144)||(12422000-12422053)
chr8 (57-140)||(1937149-1937233)
chr8 (64-167)||(18689495-18689597)
chr8 (84-126)||(5033108-5033150)
chr8 (68-140)||(17867654-17867727)
chr8 (63-130)||(21486926-21486993)
chr8 (64-139)||(24557177-24557252)
chr8 (57-127)||(6399921-6399991)
chr8 (57-127)||(30796275-30796344)
chr8 (63-133)||(36748494-36748563)
chr8 (1-37)||(42503954-42503990)
[»] scaffold0012 (1 HSPs)
scaffold0012 (57-175)||(208060-208178)
[»] chr3 (34 HSPs)
chr3 (57-180)||(19830386-19830509)
chr3 (57-181)||(43719901-43720025)
chr3 (57-180)||(2229980-2230103)
chr3 (57-180)||(27033648-27033771)
chr3 (57-180)||(34373828-34373951)
chr3 (57-171)||(46167390-46167504)
chr3 (57-161)||(34373559-34373663)
chr3 (67-175)||(40851781-40851889)
chr3 (76-175)||(24754673-24754772)
chr3 (76-175)||(24763670-24763769)
chr3 (57-155)||(12402963-12403061)
chr3 (57-174)||(48084816-48084934)
chr3 (57-162)||(550790-550894)
chr3 (57-140)||(31523663-31523746)
chr3 (57-163)||(566746-566852)
chr3 (57-140)||(42613077-42613160)
chr3 (57-140)||(49679265-49679348)
chr3 (127-180)||(24647905-24647958)
chr3 (64-172)||(10474402-10474509)
chr3 (65-173)||(28229365-28229472)
chr3 (64-174)||(29586340-29586449)
chr3 (93-174)||(33632855-33632935)
chr3 (57-133)||(40810357-40810434)
chr3 (57-129)||(1995441-1995513)
chr3 (207-265)||(8322728-8322786)
chr3 (64-129)||(54911658-54911723)
chr3 (65-129)||(25285843-25285907)
chr3 (63-121)||(48950613-48950671)
chr3 (64-174)||(51982547-51982656)
chr3 (100-172)||(30235418-30235489)
chr3 (63-127)||(33979937-33980001)
chr3 (1-37)||(40809579-40809615)
chr3 (1-37)||(44311393-44311429)
chr3 (1-37)||(44312401-44312437)
[»] chr1 (36 HSPs)
chr1 (57-175)||(50484383-50484501)
chr1 (57-175)||(12151764-12151882)
chr1 (57-175)||(50294023-50294141)
chr1 (57-175)||(48327114-48327231)
chr1 (57-180)||(23861907-23862033)
chr1 (57-179)||(40328275-40328394)
chr1 (105-175)||(12380837-12380907)
chr1 (105-175)||(12384904-12384974)
chr1 (63-174)||(18976265-18976377)
chr1 (75-180)||(7840634-7840739)
chr1 (100-175)||(45978045-45978120)
chr1 (65-171)||(32361271-32361377)
chr1 (57-121)||(12380924-12380988)
chr1 (57-121)||(12384991-12385055)
chr1 (57-164)||(24977237-24977343)
chr1 (184-273)||(46086133-46086222)
chr1 (184-265)||(46600822-46600903)
chr1 (57-140)||(30077639-30077722)
chr1 (57-167)||(39426207-39426317)
chr1 (57-140)||(52280034-52280117)
chr1 (63-126)||(24413291-24413354)
chr1 (112-174)||(1228501-1228563)
chr1 (64-174)||(32618805-32618913)
chr1 (110-163)||(30860741-30860794)
chr1 (63-139)||(5047377-5047453)
chr1 (57-129)||(26860056-26860128)
chr1 (68-140)||(6948825-6948899)
chr1 (63-130)||(32887785-32887852)
chr1 (68-140)||(18107316-18107389)
chr1 (64-115)||(7844992-7845043)
chr1 (63-102)||(23916089-23916128)
chr1 (57-103)||(46608409-46608455)
chr1 (63-140)||(46045690-46045767)
chr1 (1-37)||(7338831-7338867)
chr1 (57-129)||(26372249-26372321)
chr1 (58-130)||(33441531-33441603)
[»] scaffold0035 (1 HSPs)
scaffold0035 (57-175)||(16357-16475)
[»] scaffold0250 (1 HSPs)
scaffold0250 (57-175)||(7144-7266)
[»] scaffold0008 (1 HSPs)
scaffold0008 (60-180)||(9156-9276)
[»] scaffold0126 (1 HSPs)
scaffold0126 (57-174)||(22404-22520)
[»] scaffold0009 (1 HSPs)
scaffold0009 (57-174)||(6396-6513)
[»] scaffold0006 (1 HSPs)
scaffold0006 (100-175)||(73817-73892)
[»] scaffold0456 (1 HSPs)
scaffold0456 (91-175)||(13710-13795)
[»] scaffold0171 (1 HSPs)
scaffold0171 (57-130)||(17311-17384)
[»] scaffold0062 (1 HSPs)
scaffold0062 (64-167)||(58684-58786)
[»] scaffold0664 (1 HSPs)
scaffold0664 (68-140)||(4695-4768)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1-31)||(13274-13304)


Alignment Details
Target: chr5 (Bit Score: 111; Significance: 5e-56; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 35660687 - 35660569
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35660687 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 35660588  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  35660587 ccaaatggagaggatcttc 35660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 37266728 - 37266846
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37266728 taaaatataattaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 37266827  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  37266828 ccaaatggagaggatcttc 37266846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 18625499 - 18625375
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  18625499 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttg 18625400  T
Q  157 ccaaatggagaggatcttcgcccaa 181  Q
    ||||||||||||||||||| |||||    
T  18625399 ccaaatggagaggatcttcacccaa 18625375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 11775790 - 11775908
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11775790 taaaatataattaatgacggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttta 11775889  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  11775890 ccaaatggagaggatcttc 11775908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 4895813 - 4895699
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4895813 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 4895714  T
Q  157 ccaaatggagaggat 171  Q
    ||||||  |||||||    
T  4895713 ccaaataaagaggat 4895699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 13032115 - 13032233
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| || ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  13032115 taaaatataattaatgatggtgggacccatttagtggtaggactcaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttg 13032214  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  13032215 ccaaatggagaggatcttc 13032233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 32129695 - 32129577
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||    
T  32129695 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctatttttggtgtctatctctctccaacttataaaactccatttattttg 32129596  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  32129595 ccaaatggagaggatcttc 32129577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 14349800 - 14349918
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||     
T  14349800 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctgtctctctccaacttacaaaactccatttatttta 14349899  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||| ||||||||||||    
T  14349900 ccaaatagagaggatcttc 14349918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 34827189 - 34827312
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  34827189 taaaatataattaaagatggtgggacccacttagtggtaggatccaccatctattttttttgtctatctctctccaacttgcataactccatttattttg 34827288  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    | ||||||||| ||||||| ||||    
T  34827289 ctaaatggagatgatcttcaccca 34827312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 40753240 - 40753122
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||    
T  40753240 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatatattttttgtgtctatctttctccaacttgcaaaactttatttattttg 40753141  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||| ||||||||||||    
T  40753140 ccaaatagagaggatcttc 40753122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 39902412 - 39902535
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| |  || |||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  39902412 taaaatataattaatgatggtggaatccatttagtggtaggacccaccatctatttcttgtgtttatctctctccaacttgtaaaactccatttattttg 39902511  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
     ||||||||||||| |||| ||||    
T  39902512 tcaaatggagaggaacttcaccca 39902535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 8441049 - 8440943
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| |||||||||||| |   |||||||||||||| ||||||||||  |||||||||||||||||||||||||||||    
T  8441049 taaaatataattaatgatggtgggacacacttagtggtatgtcgcaccatctatttttggtgtctatctacctccaacttgcaaaactccatttattttg 8440950  T
Q  157 ccaaatg 163  Q
    |||||||    
T  8440949 ccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 29340999 - 29341108
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||||||||||||| |||||| | |||||| |||| ||||||||| ||||||||||||||||||| |||| | |||||||||||| | |||||||    
T  29340999 taattaatgatggtgggacccacttaatagtaggacccactatctattttctgtgtctatctctctccaaattgc-atactccatttattataccaaatg 29341097  T
Q  164 gagaggatctt 174  Q
    |||||||||||    
T  29341098 gagaggatctt 29341108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 175
Target Start/End: Original strand, 43309113 - 43309223
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatgg 164  Q
    ||||||||||||||| || || ||| ||||| || |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||      
T  43309113 aattaatgatggtggaacccatttaatggtaagatccactatctattttttatgtctatctctctccaacttgcaaaactccatttattttatcaaataa 43309212  T
Q  165 agaggatcttc 175  Q
    |||||||||||    
T  43309213 agaggatcttc 43309223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 3057419 - 3057529
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||||||| ||| |||||||| ||||||||| ||| ||||| |||||| ||||||||||||||| | ||| ||||||| ||||||||| | ||||    
T  3057419 ataattaatgatgatggaactcactttgtggtaggatccatcatcttttttttttgtctatctctctccgaattg-aaaactctatttattttacaaaat 3057517  T
Q  163 ggagaggatctt 174  Q
    ||||||||||||    
T  3057518 ggagaggatctt 3057529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 3057232 - 3057135
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||||||||||||||||  || |||||||||| |||||||| |||||||||||||||||||| ||||||| ||||| |||| ||| ||||||||||||    
T  3057232 taaaatataattaatgattatgtgactcacttaatggtaggatccaccatctattttttgtgtttatctctatccaaattgc-aaattccatttatttt 3057135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 36290599 - 36290682
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||  ||||||||| ||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  36290599 taaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 36290682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 4592797 - 4592858
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtg 118  Q
    |||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  4592797 taaaatataattaatgatggtgggacccacttagtggtaagacccaccatctattttttgtg 4592858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 18653364 - 18653472
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||| | |||||| |||||||||| |||||| |  ||| ||||||||||||||||||||||||| ||| |||| ||||||||||||||||| ||| |    
T  18653364 ataattattaatggtgagactcacttaatggtagaactcactatctattttttgtgtctatctctcttcaaattgc-aaactccatttattttgacaatt 18653462  T
Q  163 ggagaggatc 172  Q
     |||||||||    
T  18653463 tgagaggatc 18653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 27428949 - 27428877
Alignment:
Q  67 ttaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgca 139  Q
    ||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||||||| ||||| |||||    
T  27428949 ttaatgatggtggaactcacttaatggtaggattcaccatctattttttgtgtctatctctttccaaattgca 27428877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 32793371 - 32793487
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||| ||||| |||||||  ||||||| ||| ||  || |||||||||||||||| |||||||||| || |||  |||||||||||||||||    
T  32793371 taaaatataattgatgattgtgggacctacttagtagtaagaatcatcatctattttttgtgtatatctctctctaaattg-taaactccatttattttg 32793469  T
Q  157 ccaaatggagaggatctt 174  Q
    | |||| || ||||||||    
T  32793470 ctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 41660103 - 41660186
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||| ||||| |  || ||||||  |||||||||||||||||||||||||| ||||||    
T  41660103 taaaaaataattaatgatggtgggacccacctagtgatgagacccaccacttattttttgtgtctatctctctccaaattgcaa 41660186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 28142853 - 28142807
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccac 103  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||    
T  28142853 taaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 31653039 - 31653148
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||||| ||| |||||||||| | ||||||  | | ||||||||| ||||| ||||||||||||| |||| | || ||||||||| | |||||||    
T  31653039 taattaatgattgtgagactcacttaatagtaggactcgctatctattttatgtgtttatctctctccaaattgc-atacgccatttattataccaaatg 31653137  T
Q  164 gagaggatctt 174  Q
    || ||||||||    
T  31653138 gataggatctt 31653148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 2984468 - 2984392
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    ||||| |||||||||||||||||||| || |||||| |||||  || ||  |||||| |||||||||||||||||||    
T  2984468 taaaaaataattaatgatggtgggacccatttagtgataggattcatcacttattttatgtgtctatctctctccaa 2984392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 3041386 - 3041302
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccacca-tctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| | ||||||| ||||| |||||| |   |||||||| ||||||||||||||| ||||||    
T  3041386 taaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtatctatctctctccaaattgcaa 3041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 43222129 - 43222193
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    |||||||||||||||||||  || ||| || || || ||||||||||||||||||||||||||||    
T  43222129 ataattaatgatggtgggatccatttaatgataagacccaccatctattttttgtgtctatctct 43222193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 31546490 - 31546599
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||| ||| |||||  |||||| | |||||  |||||||||||||| | |||||| |||||| ||| |||| | |||||||||||| |||||||||    
T  31546490 taattaattatgatgggatccacttaatagtagggcccaccatctattttatatgtctacctctcttcaaattgc-atactccatttattatgccaaatg 31546588  T
Q  164 gagaggatctt 174  Q
    | || ||||||    
T  31546589 gggatgatctt 31546599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 9460655 - 9460599
Alignment:
Q  115 tgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 172  Q
    ||||||||||||||||||| ||||| | ||| ||||||||| ||||||||||||||||    
T  9460655 tgtgtctatctctctccaaattgcata-ctctatttattttaccaaatggagaggatc 9460599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 223
Target Start/End: Complemental strand, 38760875 - 38760835
Alignment:
Q  183 taaaaaggtggtaggactcacctatttttattctctcttca 223  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  38760875 taaaaaggtggtagggcccacctatttttattctctcttca 38760835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 10362092 - 10361970
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| ||||||||||| |||| ||| |||||| |||||||| |||| | | ||||| ||| ||||||||||||| | |||| |   |||||||| |||     
T  10362092 taaaaaataattaatgacggtgagacccacttaatggtaggatccactaccaattttatgtctctatctctctcctaattgc-atcttccatttagtttt 10361994  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
      ||||||||||||||||| ||||    
T  10361993 ataaatggagaggatcttcaccca 10361970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Original strand, 35650321 - 35650430
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||||||||||  | ||| ||| |  ||||| |||||| ||||||||||||||||||| | | | | |||| || |||||||||||||   ||||    
T  35650321 ataattaatgatggtgaaattcatttaataataggacccaccacctattttttgtgtctatcttttttctaattgc-aatctccatttattttaataaat 35650419  T
Q  163 ggagaggatct 173  Q
    |||||||||||    
T  35650420 ggagaggatct 35650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 1475683 - 1475638
Alignment:
Q  107 ctattttttgtgtctatctctctccaacttgcaaaactccatttat 152  Q
    ||||||||||| ||||| |||||| |||||||||||| ||||||||    
T  1475683 ctattttttgtatctatttctctcaaacttgcaaaacaccatttat 1475638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 130
Target Start/End: Original strand, 17247403 - 17247476
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    ||||| ||||||||| ||| ||| || |||||| || ||| | |||||| |||||||||| |||||||||||||    
T  17247403 taaaaaataattaattatgatggaacgcacttaatgatagaacccaccacctattttttgcgtctatctctctc 17247476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 32316571 - 32316509
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    |||||| ||||| ||||||||||||||||||||| | |||    ||| |||||||||||||||||||    
T  32316571 ataatttatgattgtgggactcacttagtggtagaatcca----ctagtttttgtgtctatctctct 32316509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 9465746 - 9465810
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    ||||||||||||||||  | ||| ||| || ||||| |||||| ||||||| |||||||||||||    
T  9465746 ataattaatgatggtgaaattcatttaatgataggatccaccacctattttatgtgtctatctct 9465810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 5e-56; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 35316822 - 35316940
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35316822 taaaatataattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 35316921  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  35316922 ccaaatggagaggatcttc 35316940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 13238678 - 13238796
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13238678 taaaatataattaatgatggtgggacccacttggtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttg 13238777  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  13238778 ccaaatggagaggatcttc 13238796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 28564889 - 28565007
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||    
T  28564889 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctacaacttaaaaaactccatttattttg 28564988  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  28564989 ccaaatggagaggatcttc 28565007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 23259565 - 23259447
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||  |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23259565 taaaatataattaatgatggtgggatccacttagtagtaggacccaccagctattttttgtgtctatctctctccaacttgcaaaacaccatttattttg 23259466  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  23259465 ccaaatggagaggatcttc 23259447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 11864874 - 11864984
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||  ||||||||| |||||| |||||||||        |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11864874 taaaatataatccatgatggtgagactcatttagtggta--------catctattttttgtgtctatctctctccaacttgtaaaactccatttattttg 11864965  T
Q  157 ccaaatggagaggatcttc 175  Q
      |||||||||||||||||    
T  11864966 ataaatggagaggatcttc 11864984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 45625123 - 45625039
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||| ||| |||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45625123 tggtgggacccacaatttatttcttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 45625039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 174
Target Start/End: Original strand, 2063353 - 2063467
Alignment:
Q  60 aatataattaatgatggtgggactcacttagtggtaggagcca-ccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgcc 158  Q
    ||||| |||||||||||||| || ||||| ||||||||| | | ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |    
T  2063353 aatattattaatgatggtggaacccacttggtggtaggaccaaaccatctattttttgtgtctatctctctccaaattgc-aaactctatttattttgtc 2063451  T
Q  159 aaatggagaggatctt 174  Q
    ||||| ||||||||||    
T  2063452 aaatgaagaggatctt 2063467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 374990 - 375073
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||  ||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  374990 taaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 375073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 8988852 - 8988935
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| | | ||  |||||||||||||||||||||||||| ||||||    
T  8988852 taaaaaataattaatgatggtgggacccacttagtgataggacctatcacttattttttgtgtctatctctctccaaattgcaa 8988935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 23459924 - 23459841
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| || |||||| ||||| || |||  |||||||||||||||||||||||||| ||||||    
T  23459924 taaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 23459841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 4446974 - 4446860
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| |||||||||||| |||  || || |||||||||||| |||| ||||||||| ||||||||||||||| ||| ||| | |  ||||||||||||     
T  4446974 taaaaaataattaatgatagtgaaacccaattagtggtaggatccactatctattttatgtgtctatctctcttcaaattgtacacttccatttatttta 4446875  T
Q  157 ccaaatggagaggat 171  Q
     ||||||||||||||    
T  4446874 tcaaatggagaggat 4446860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 100 - 173
Target Start/End: Original strand, 40640709 - 40640783
Alignment:
Q  100 ccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatct 173  Q
    |||||||||||| |||||| | ||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  40640709 ccaccatctattcttttgtatatatctctctccaaattgcaaaactccatttattttaacaaatggagaggatct 40640783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 30709115 - 30709183
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    |||||||||||||||||  ||||||||||||||| |||  ||||||||| |||||||||||||||||||    
T  30709115 aattaatgatggtgggatccacttagtggtaggacccaatatctattttatgtgtctatctctctccaa 30709183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Complemental strand, 21454572 - 21454476
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||||||| || |||||| ||||| || |||| ||||| |||||||||||||||||||| || || | ||||||||||||||||    
T  21454572 taaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta-tttttgtgtctatctctctctaaattac-aaactccatttatttt 21454476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 38397085 - 38397194
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||| ||||||||||||||||||| | |||| | |||| ||||||||| | ||||||||||||| ||| |||| | ||||| |||||| | | |||||    
T  38397085 taattattgatggtgggactcacttaatagtagcacccactatctattttatttgtctatctctcttcaaattgc-atactccgtttattatacaaaatg 38397183  T
Q  164 gagaggatctt 174  Q
    |||||||||||    
T  38397184 gagaggatctt 38397194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 19908777 - 19908892
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| |||||||||||||||||||| ||||||   ||||||  ||| ||||||||| |||||||||||| |||||| |||| | |||||||||||| |     
T  19908777 taaaaaataattaatgatggtgggacccacttaaaagtaggactcactatctattttatgtgtctatctc-ctccaaattgc-atactccatttattata 19908874  T
Q  157 ccaaatggagaggatctt 174  Q
     |||||| ||||||||||    
T  19908875 tcaaatgaagaggatctt 19908892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 36929720 - 36929823
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||||||| || |  || ||| ||||||||  ||| | ||||||| ||||||||||||||||||| |||| | |||||||||||||||| |||||    
T  36929720 taattaatgatggcggaatccatttaatggtaggacacactacctattttatgtgtctatctctctccaaattgc-atactccatttattttgctaaatg 36929818  T
Q  164 gagag 168  Q
    |||||    
T  36929819 gagag 36929823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 15709772 - 15709874
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||| ||| || |||||| |||||||| |||| ||||||||| | ||| ||||||||||||| |||| | | |||||||||||||| ||||     
T  15709772 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgc-atattccatttattttgctaaatc 15709870  T
Q  164 gaga 167  Q
    ||||    
T  15709871 gaga 15709874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 13780506 - 13780579
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttt-ttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  |||||| |||||||||||||||||||| ||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 13780579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 19905889 - 19905973
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatt 153  Q
    |||||||||||||||||||||| |  || |  |||||||||||||| |||||||||||||||| || |||| | ||||||||||||    
T  19905889 taatgatggtgggactcacttaataatatgtcccaccatctattttatgtgtctatctctctcaaaattgc-atactccatttatt 19905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 30857750 - 30857642
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    |||||||||||||||| ||  || ||| | |||||| |||  |||||||||||||||||| |||||| ||| || | | |||||||||||||||  ||||    
T  30857750 ataattaatgatggtgtgatccatttaatagtaggatccattatctattttttgtgtctacctctcttcaaattac-atactccatttattttgtgaaat 30857652  T
Q  163 ggagaggatc 172  Q
    ||||||||||    
T  30857651 ggagaggatc 30857642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 35029894 - 35029931
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactcc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35029894 taaattgaggaaacctaaatggagcaaagatagactcc 35029931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 35315499 - 35315615
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| ||| |||| |||||  ||||||||||| || ||||| |||||| ||||| ||||||| ||||||||||||| |||||    ||||||||||||     
T  35315499 taaaaaatagttaacgatggaaggactcacttaatgataggacccaccacctattgtttgtgtttatctctctccaaattgcatct-tccatttattttt 35315597  T
Q  157 ccaaatggagaggatctt 174  Q
      ||||||||||||||||    
T  35315598 ataaatggagaggatctt 35315615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 36758939 - 36758823
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| |||||||||||| |||| || ||| ||  | ||||| ||||||  || ||||||||||||||||||||||| |||| ||  ||||||||||||     
T  36758939 taaaaaataattaatgattgtggaacccacctaaagataggatccaccacttactttttgtgtctatctctctccaaattgc-aacttccatttattttt 36758841  T
Q  157 ccaaatggagaggatctt 174  Q
      ||||||||||||||||    
T  36758840 ataaatggagaggatctt 36758823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 29188650 - 29188734
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccacca-tctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| | ||||||| |||||  ||||| |   |||||||||||||||||||||||| ||||||    
T  29188650 taaaaaataattaatgatggtgggacccgcttagtgataggacgcaccacttgtttttttgtgtctatctctctccaaattgcaa 29188734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 35315359 - 35315257
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||| ||||||||||||| ||| | ||| || |||  ||||||||| ||||||||||||||| ||| |||| | | |||| ||||| |||||||||    
T  35315359 taattaataatggtgggactcaattaatagtaagatccattatctattttatgtgtctatctctcttcaaattgc-atagtccacttattatgccaaatg 35315261  T
Q  164 gaga 167  Q
    ||||    
T  35315260 gaga 35315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 174
Target Start/End: Original strand, 38824065 - 38824140
Alignment:
Q  100 ccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    ||||||| |||| |||| ||||||||||||||||| || ||||||||||||||||||  ||||| |||| ||||||    
T  38824065 ccaccatttattcttttttgtctatctctctccaaattacaaaactccatttattttagcaaatagagatgatctt 38824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 3594865 - 3594938
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||| ||||||||||||||||| ||||||    
T  3594865 taatgatggtgggatccacttagtgataggatccaccacttatttttttttgtctatctctctccaaattgcaa 3594938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 40254217 - 40254144
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  |||| ||||||||||||||||| |||| ||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccaccacttattattttgtgtctatctctccccaaattgcaa 40254144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 32009971 - 32009935
Alignment:
Q  139 aaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||| ||||||||||||||||||    
T  32009971 aaaactccatttattttgtcaaatggagaggatcttc 32009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39063841 - 39063805
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39063841 taaattgaggaaacctaaatggagcaaagatggactc 39063805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 173
Target Start/End: Complemental strand, 373236 - 373127
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||| ||||||||| ||| ||| |  || || |||||| ||||||||||||||||||| | ||  | |||| || |||||||||||||   ||||    
T  373236 ataattaataatggtgggattcatttaataatatgacccaccacctattttttgtgtctatctttttcataattgc-aatctccatttatttttataaat 373138  T
Q  163 ggagaggatct 173  Q
    |||||||||||    
T  373137 ggagaggatct 373127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 22061498 - 22061433
Alignment:
Q  106 tctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 172  Q
    |||||||| ||||||||||||||| ||| |||| | ||| ||||||||||| ||||| |||||||||    
T  22061498 tctattttatgtgtctatctctcttcaaattgc-atacttcatttattttgtcaaattgagaggatc 22061433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 41435271 - 41435205
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaa 133  Q
    |||| |||||||||  ||||||||| ||||| ||||||  |||||||| ||||||||||||||||||    
T  41435271 taataatggtgggatccacttagtgataggatccaccacttatttttttgtgtctatctctctccaa 41435205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 6205456 - 6205492
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||||||||| |||||||||||||||||| |||||    
T  6205456 taaattgaggaagcctaaatggagcaaagatggactc 6205492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 136
Target Start/End: Original strand, 28029834 - 28029901
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaactt 136  Q
    ||||||| |||||| ||| |||||| ||||| ||||||| | |||||| ||||||||||||| ||||||    
T  28029834 taatgatagtgggattcatttagtgataggatccaccatttttttttt-tgtctatctctcttcaactt 28029901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 31618845 - 31618769
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    ||||| |||||||||||| |||||||||||||| || || ||  ||| ||||||||| | | ||||||| |||||||    
T  31618845 taaaaaataattaatgattgtgggactcacttaatgatatgactcactatctattttatatatctatctttctccaa 31618769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 36758726 - 36758675
Alignment:
Q  122 atctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||||||||||| ||||| | ||||||||| |||| |||||||||||||||||    
T  36758726 atctctctccaaattgcata-ctccatttactttgacaaatggagaggatctt 36758675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 108; Significance: 3e-54; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 19901996 - 19901873
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19901996 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttta 19901897  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||||||| ||||    
T  19901896 ccaaatggagaggatcttcaccca 19901873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 34778418 - 34778536
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34778418 taaaatataattaatgatggtgggacccacttagtggtaggatccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttg 34778517  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  34778518 ccaaatggagaggatcttc 34778536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 56558276 - 56558394
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56558276 taaaatataattaatgatggtgggacccacttagtgataggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 56558375  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  56558376 ccaaatggagaggatcttc 56558394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 3952248 - 3952125
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  3952248 taaaatataattaatgatggtgagacccacttagtggtaggacccaccatctattttttttgtctatctctctccaacttgccaaactccatttattttg 3952149  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||||||| ||||    
T  3952148 ccaaatggagaggatcttcaccca 3952125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 5416543 - 5416421
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5416543 taaaatataattaatgatggtgggacccacttagtggtaggacccacaatctattttt-gtgtctatctctctccaacttgcaaaactccatttattttg 5416445  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
     |||||||||||||||||| ||||    
T  5416444 tcaaatggagaggatcttcaccca 5416421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 12312554 - 12312435
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgt-gtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  12312554 taaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttttgtctatctctctccaacttgcaaaactccatttatttt 12312455  T
Q  156 gccaaatggagaggatcttc 175  Q
    ||||||||||||||||||||    
T  12312454 gccaaatggagaggatcttc 12312435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 5763240 - 5763122
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  5763240 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtttctatctctctccaacttgtaaaactccatatattttg 5763141  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||| ||||||||||||    
T  5763140 ccaaattgagaggatcttc 5763122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 23610639 - 23610757
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23610639 taaaatatatttaatgatggtgggacccacttagtggtatgacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttta 23610738  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||||||||||||||||    
T  23610739 tcaaatggagaggatcttc 23610757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 33247208 - 33247090
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| || || |||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33247208 taaaatataattaatgatggtggaacccatttagtggtagaacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttg 33247109  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  33247108 ccaaatggagaggatcttc 33247090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 18207118 - 18206994
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||    
T  18207118 taaaatataattaatgatgatgggacccacttagtggtaggacccaccatctattttttttgtctatctctctctaacttgcaaaactacatttattttg 18207019  T
Q  157 ccaaatggagaggatcttcgcccaa 181  Q
     |||||||||||||||||| |||||    
T  18207018 tcaaatggagaggatcttcacccaa 18206994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 30567898 - 30568008
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30567898 taaaatataattaatgatgatggaacccacttagtggtaggacccaccatctattttttgtgtctatctctcttcaacttgcaaaactccatttattttg 30567997  T
Q  157 ccaaatggaga 167  Q
    |||||||||||    
T  30567998 ccaaatggaga 30568008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 24073617 - 24073731
Alignment:
Q  61 atataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaa 160  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  24073617 atataattaatgatggcgggacccacttagtggtaggacccaccatctatttgttgtgtctatctctctccaacttacaaatctccatttattttgccaa 24073716  T
Q  161 atggagaggatcttc 175  Q
    |||| ||||||||||    
T  24073717 atggggaggatcttc 24073731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 33262630 - 33262512
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||    
T  33262630 taaaatataattaatgatggtgggacctatttagtggtaggatccaccatctattttttgtgtctatctctctctaacttgcaaaacacaatttattttg 33262531  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||| ||||||||||||    
T  33262530 ccaaatagagaggatcttc 33262512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 38079798 - 38079680
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| |  |||||||| |||||| ||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  38079798 taaaatataattaatgatggtggaatccacttagtagtaggacccaccatctatttcttgtgtctatctctctcaaactagcaaaactccatttattttg 38079699  T
Q  157 ccaaatggagaggatcttc 175  Q
      |||||||||||||||||    
T  38079698 ttaaatggagaggatcttc 38079680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 39862514 - 39862632
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| ||||| |||||| |||||  |||||||||||||||||||||||||||||| ||||||||||| || |||||||||     
T  39862514 taaaatataattaatgatggtggaactcatttagtgataggacacaccatctattttttgtgtctatctctctcaaacttgcaaaattctatttatttta 39862613  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||||||||||||||||    
T  39862614 tcaaatggagaggatcttc 39862632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 12153185 - 12153269
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12153185 tggtgggacccaccatctaatttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 12153269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 47922445 - 47922327
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| |||||||  |||| |||||| ||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||    
T  47922445 taaaaaataattatagatgatgggacccacttagtggtaggacccaccatctattcttttgtgtctatatctctccaaattgcaaaactcaatttatttt 47922346  T
Q  156 gccaaatggagaggatctt 174  Q
      |||||||||||||||||    
T  47922345 agcaaatggagaggatctt 47922327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 52018794 - 52018883
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcgccca 180  Q
    |||| ||| |||| || |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  52018794 tggtgggatccactatttattttttgtatctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccca 52018883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 23474115 - 23474224
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||||||||| ||||| | | |||||| |||||||||||||| |||||||||||||| |||| |||| | |||||||||||| ||| |||||    
T  23474115 taattaatgatggtgggattcactcaatagtaggacccaccatctattttatgtgtctatctctccccaaattgc-atactccatttattatgctaaatg 23474213  T
Q  164 gagaggatctt 174  Q
    |||||||||||    
T  23474214 gagaggatctt 23474224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 56269153 - 56269071
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  56269153 aaaaaataattaatgatggtgggacccacttagtggtaggacccaccacttattttttgtgtctatctctctccaaattgcaa 56269071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 1871280 - 1871388
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||||||| |||||| |||||||| |||||| |||| |||||| |||| ||||||||||||||||| |||| | ||||||||||||||| |||||    
T  1871280 ataattaatgatgatgggacccacttagtagtaggatccactatctatattttttgtctatctctctccaaattgc-atactccatttattttgtcaaat 1871378  T
Q  163 ggagaggatc 172  Q
     |||||||||    
T  1871379 tgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 181
Target Start/End: Original strand, 33524313 - 33524383
Alignment:
Q  111 tttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcgcccaa 181  Q
    ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||    
T  33524313 tttttgtatctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcacccaa 33524383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 184 - 274
Target Start/End: Original strand, 50382516 - 50382606
Alignment:
Q  184 aaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctatttt 274  Q
    |||||||||||||| | |||||||||| |||||||||||||||  ||||| || ||||||||||||||||||| |||||||| ||||||||    
T  50382516 aaaaaggtggtagggcccacctattttcattctctcttcacaaactctttcctttccaaacaagagaagtttggtacttctcttctatttt 50382606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 47922153 - 47922052
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||| ||||||||||||| || |||||||||||| || |||| ||||||||||||||| ||||| |    ||||||||||| |||||||||||||    
T  47922153 taaaatatatttaatgatggtggaacccacttagtggtaagacccactatctattttttgtgtttatcttt----aacttgcaaaattccatttattttg 47922058  T
Q  157 ccaaat 162  Q
    ||||||    
T  47922057 ccaaat 47922052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 139
Target Start/End: Complemental strand, 56453898 - 56453816
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgca 139  Q
    ||||| ||||| |||||||||||||| |||||| || ||||| |||||| ||||||||||||||||||||||||||| |||||    
T  56453898 taaaaaataatgaatgatggtgggacccacttaatgataggacccaccacctattttttgtgtctatctctctccaaattgca 56453816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 63 - 170
Target Start/End: Original strand, 34927488 - 34927596
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaa 161  Q
    ||||||||||||| || |||  ||||| |||||||| |||||||||||| ||||||||||||||||||  || ||||||||| |||||||||||   |||    
T  34927488 ataattaatgatgatgagacatacttaatggtaggacccaccatctattcttttgtgtctatctctctttaaattgcaaaaccccatttattttagtaaa 34927587  T
Q  162 tggagagga 170  Q
    |||||||||    
T  34927588 tggagagga 34927596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 5524444 - 5524527
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| |||||| || ||||| ||||||  |||||||| ||||||||||||||||| ||||||    
T  5524444 taaaaaataattaatgatggtgggacccacttactgataggacccaccacttattttttatgtctatctctctccaaattgcaa 5524527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 37002329 - 37002246
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||  ||||| ||||||  |||||||||||||||||||| ||||| ||||||    
T  37002329 taaaaaataattaatgatggtgggacccacttagtaataggatccaccacttattttttgtgtctatctctttccaaattgcaa 37002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 140
Target Start/End: Complemental strand, 36688260 - 36688183
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||||||||||||||||||| ||||||||| |||||  || ||  |||||||||||||||||||||||||| ||||||    
T  36688260 ataattaatgatggtgggacccacttagtgataggactcaacacttattttttgtgtctatctctctccaaattgcaa 36688183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 42010114 - 42010197
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| || |||||| ||||| || |||  |||||||||| ||||||||||||||| ||||||    
T  42010114 taaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtatctatctctctccaaattgcaa 42010197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 26428971 - 26429061
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttat 152  Q
    ||||||||||||| || ||| || | ||||||||||  ||||||||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  26428971 ataattaatgatgatgagacccattcagtggtaggactcaccatctattcttttgtgtctatctttctccaaattgcaaaacttcatttat 26429061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 31862298 - 31862246
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatcta 109  Q
    ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  31862298 taaaaaataattaatgatggtgggacccacttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 13493276 - 13493385
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctcc--aacttgcaaaactccatttattttgccaaa 161  Q
    |||||||||||   ||||||||||||||||| ||| |||| |||||||||  |||||||||||||||   || ||||| | |||||||||||||| ||||    
T  13493276 taattaatgataaagggactcacttagtggtgggatccactatctattttacgtgtctatctctctctctaaattgcata-ctccatttattttgtcaaa 13493374  T
Q  162 tggagaggatc 172  Q
    | |||||||||    
T  13493375 tagagaggatc 13493385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 1015931 - 1015849
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||| |||||||||||||||||||| ||| || || | ||| ||||||  ||||||||||||||||||||||| || ||||||    
T  1015931 aaaaaataattaatgatggtgggacccacctaatgatgggacccaccacttattttttgtgtctatctctctctaaattgcaa 1015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 12241486 - 12241440
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccac 103  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  12241486 taaaatataattaatgatggtgggacccacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 48914596 - 48914480
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| |||||||||||| | || || |||||  || ||||| |||| ||||||||| |||||| ||||||||| || |||| |  ||||||||||||||    
T  48914596 taaaaaataattaatgatagcggaacccactttatgataggacccacaatctattttatgtgtcgatctctctctaaattgc-attctccatttattttg 48914498  T
Q  157 ccaaatggagaggatctt 174  Q
    | ||||||||| ||||||    
T  48914497 ctaaatggagaagatctt 48914480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 127
Target Start/End: Complemental strand, 48084603 - 48084533
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    ||||| |||||||||||||||||||| ||||||||| ||| | ||||||  ||| |||| |||||||||||    
T  48084603 taaaaaataattaatgatggtgggacccacttagtgctagaacccaccacttatgttttatgtctatctct 48084533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 17493010 - 17493083
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttt-ttgtgtctatctctctccaacttgcaa 140  Q
    |||||||||||| |  ||||||||| ||||| ||||||  |||||| |||||||||||||||||||| ||||||    
T  17493010 taatgatggtggaatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17493083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 32146510 - 32146583
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||||| ||||||||||||||| ||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtatctatctctctccaaattgcaa 32146583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 36532623 - 36532738
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| ||||||||| ||||||| || |||| | || ||||| |||| || |||||| |||||||||||||||| || |||   |||||||||||||||     
T  36532623 taaaaaataattaat-atggtggaacccactgaatgataggatccactatttattttatgtgtctatctctctctaaattg-tgaactccatttatttta 36532720  T
Q  157 ccaaatggagaggatctt 174  Q
     || ||||||||||||||    
T  36532721 tcagatggagaggatctt 36532738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 46238974 - 46239047
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||||||||||||||||| ||| ||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctcttcaaattgcaa 46239047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 50483628 - 50483520
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||||||  || |||||||||| |||| ||| | |  |||||||||  |||||||||| ||||||| |||| | |||| ||||||||||| ||||    
T  50483628 ataattaatgataatgtgactcacttaatggtgggatcgaatatctattttacgtgtctatctgtctccaaattgc-atactcaatttattttgctaaat 50483530  T
Q  163 ggagaggatc 172  Q
    ||||| ||||    
T  50483529 ggagatgatc 50483520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 53526096 - 53526169
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||| ||||||||||||||||| ||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 53526169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 55160438 - 55160365
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||||||||||||||| ||||| ||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctttccaaattgcaa 55160365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 25219003 - 25219070
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccacca--tctattttttgtgtctatctctctccaa 133  Q
    ||||||||||||||  ||||||||| ||||| ||||||  | | ||||||||||||||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccaccacttattttttttgtgtctatctctctccaa 25219070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 40215515 - 40215455
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatct 125  Q
    ||||||||||||||||||||||| |||||||||| |||  ||||| ||||| ||| |||||    
T  40215515 aattaatgatggtgggactcactaagtggtaggatccataatctaatttttatgtgtatct 40215455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 33841830 - 33841768
Alignment:
Q  109 attttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 172  Q
    ||||||||||||||||||||||||| |||  | |||||||||| |||  |||||||||||||||    
T  33841830 attttttgtgtctatctctctccaaattg-tatactccatttactttaacaaatggagaggatc 33841768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 25442252 - 25442190
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgt 119  Q
    ||||| ||||||||||  |||| ||  ||||||||||||||| |||| |||||||||||||||    
T  25442252 taaaaaataattaatgtcggtgagatccacttagtggtaggacccacaatctattttttgtgt 25442190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31414880 - 31414918
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactcca 39  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  31414880 taaattgaggaaacttaaatggagcaaagatggactcca 31414918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 32159554 - 32159584
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagat 31  Q
    |||||||||||||||||||||||||||||||    
T  32159554 taaattgaggaaacctaaatggagcaaagat 32159584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 91 - 140
Target Start/End: Original strand, 5361457 - 5361506
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||| ||| ||||||  |||||||||||||||||||||||||| ||||||    
T  5361457 tggtgggacccaccacttattttttgtgtctatctctctccaaattgcaa 5361506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44516821 - 44516785
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||| |||||||||||||||| |||||||||||||    
T  44516821 taaattaaggaaacctaaatggatcaaagatagactc 44516785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 4804445 - 4804563
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4804445 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgtaaaactccatttattttg 4804544  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  4804545 ccaaatggagaggatcttc 4804563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 13089827 - 13089709
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  13089827 taaaatataattaatgatggtggggcccacttagtggtaggacccaccatctatattttgtgtctatctctctccaacttgcaaaacaccatttattttg 13089728  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  13089727 ccaaatggagaggatcttc 13089709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 12412634 - 12412751
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12412634 taaaatataattaatgatggtggaacccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttg 12412733  T
Q  157 ccaaatggagaggatctt 174  Q
    ||||||||||| ||||||    
T  12412734 ccaaatggagaagatctt 12412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 17944159 - 17944277
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17944159 taaaatataattaatgatggtgggacccatttagtggtaggacctaccatctattttttgtgtctatctctctccaacttacaaaactccatttattttg 17944258  T
Q  157 ccaaatggagaggatcttc 175  Q
    ||||||| |||||||||||    
T  17944259 ccaaatgaagaggatcttc 17944277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 21159447 - 21159329
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||     
T  21159447 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatttctctccaacttgcaaaacttcatttatttta 21159348  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||||||||||||||||    
T  21159347 acaaatggagaggatcttc 21159329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 1249224 - 1249108
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||    
T  1249224 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttt--tgtctgtctctctccaacttacaaaactccatttattttg 1249127  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  1249126 ccaaatggagaggatcttc 1249108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 7162081 - 7162199
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  7162081 taaaatataattaatgatggtgggacccacttagtagtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttatttta 7162180  T
Q  157 ccaaatggagaggatcttc 175  Q
     |||||||||| |||||||    
T  7162181 tcaaatggagatgatcttc 7162199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 27826535 - 27826653
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||| || || |||||||     
T  27826535 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctcaaccttgcaaatcttcagttatttta 27826634  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  27826635 ccaaatggagaggatcttc 27826653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 32818090 - 32818000
Alignment:
Q  183 taaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32818090 taaaaaggtggtaggacccacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttggtacttctcctctattt 32818000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 227642 - 227523
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||| ||||||| |||||  ||||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||    
T  227642 taaaaaataatcaatgatgatgggatccacttagtggtaggacccaccatctattcttttgtgtctatctctctccaaaatgcaaaactccatttatttt 227543  T
Q  156 gccaaatggagaggatcttc 175  Q
      ||||||||||||||||||    
T  227542 agcaaatggagaggatcttc 227523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 180
Target Start/End: Original strand, 32737897 - 32737977
Alignment:
Q  100 ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  32737897 ccaccatctattttttgtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccca 32737977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 13888601 - 13888474
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| |||||| || ||| |||||||| |||||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||    
T  13888601 taaaaaataattaatgatgatgggacccagttaatggtaggaaccaccatctattattttgtgtatatctctctccaaattgcaaaactctatttatttt 13888502  T
Q  156 gccaaatggagaggatcttcgcccaact 183  Q
      || || |||||||||||  |||||||    
T  13888501 agcatattgagaggatcttaacccaact 13888474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 24484876 - 24484959
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  24484876 taaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttgtgtctatctctctccaaattgcaa 24484959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 1516250 - 1516168
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||| ||| |||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  1516250 tggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatctt 1516168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 1518339 - 1518257
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||| ||| |||||||||||||||||| || |||||||||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  1518339 tggtgggatccaccatctattttttgtatccatctctctccaaattgcaaa-ctccatttattttgccaaatggataggatctt 1518257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 64 - 171
Target Start/End: Complemental strand, 7215923 - 7215816
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||||| ||||||| || |||||||||||| |||| ||||||||| ||||||||||||||||||| |||   |  ||||||||||||  ||||||    
T  7215923 taattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatg 7215824  T
Q  164 gagaggat 171  Q
    ||||||||    
T  7215823 gagaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 29698160 - 29698220
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgt 117  Q
    |||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  29698160 taaaatataattaatgatggtgggacccacttaatggtaggatccaccatctattttttgt 29698220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 172
Target Start/End: Complemental strand, 2800689 - 2800574
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| ||||| |||||||||||||| |||||| ||||| || |||| ||||||||| ||||||||||||||||||| |||   |  |||||| |||||     
T  2800689 taaaaaataatcaatgatggtgggacccacttaatggtatgatccactatctattttatgtgtctatctctctccaaattgtgtatttccattaatttta 2800590  T
Q  157 ccaaatggagaggatc 172  Q
     |||||||||||||||    
T  2800589 tcaaatggagaggatc 2800574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 14496014 - 14495955
Alignment:
Q  214 tctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  14496014 tctctcttgacaatttctttgctatccaaacaagagaagtgtgatacttctcttctattt 14495955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 1515576 - 1515503
Alignment:
Q  100 ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||||||||||||||| | || |||||||||||| ||||||| |||||||||||||||||||| || ||||||||    
T  1515576 ccaccatctattttttttatccatctctctccaaattgcaaa-ctccatttattttgccaaattgataggatctt 1515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 30460817 - 30460930
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggag----ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttat 152  Q
    ||||||||||||||| | || |||||||| ||| ||||||||     ||| || ||| ||||||||||||||| ||||||| ||||||| ||||||||||    
T  30460817 taaaatataattaataacggcgggactcatttaatggtaggatggatccatcaactactttttgtgtctatctttctccaaattgcaaa-ctccatttat 30460915  T
Q  153 tttgccaaatggaga 167  Q
    |||| ||||||||||    
T  30460916 tttgtcaaatggaga 30460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 32254109 - 32254033
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    ||||| |||||||||||| |||||||||||||| || ||||| |||||| || |||||| |||||||||| ||||||    
T  32254109 taaaaaataattaatgatagtgggactcacttaatgataggacccaccaccttttttttttgtctatctccctccaa 32254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 2142371 - 2142288
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| ||||||||||||||||| || ||| || || | ||| ||||||  |||||||||||||||||||||||||| ||||||    
T  2142371 taaaaaataattaatgatggtggaacccacctaatgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 2142288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 17828639 - 17828530
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||| ||||| |||||  |||||| | |||| | |||| ||||||||| ||||||||||||||||||| |||| | |||||| ||||| | |||||||    
T  17828639 taattattgatgatgggatccacttaatagtagaatccactatctattttatgtgtctatctctctccaaattgc-atactccaattattataccaaatg 17828541  T
Q  164 gagaggatctt 174  Q
     ||||||||||    
T  17828540 tagaggatctt 17828530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 28696680 - 28696624
Alignment:
Q  110 ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggaga 167  Q
    |||||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  28696680 ttttttttgtctatctctctccaaattgcaaa-ctcaatttattttgccaaatggaga 28696624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 7098263 - 7098190
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||| ||||||||||||||||| ||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 7098190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 7545645 - 7545718
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctattttttg-tgtctatctctctccaacttgcaa 140  Q
    ||||||| ||||||  ||||||||| ||||| ||||||  ||||||||| ||||||||||||||||| ||||||    
T  7545645 taatgatagtgggatccacttagtgataggacccaccacttattttttggtgtctatctctctccaaattgcaa 7545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 29229149 - 29229204
Alignment:
Q  115 tgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggat 171  Q
    ||||||||||||||||||| ||||| | ||||||||||| | |||||||||||||||    
T  29229149 tgtgtctatctctctccaaattgcata-ctccatttattataccaaatggagaggat 29229204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 98
Target Start/End: Original strand, 2720376 - 2720411
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtagga 98  Q
    |||||||||||||||||||| |||||||||||||||    
T  2720376 ataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 12734413 - 12734478
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    ||||||||||||||||||| |||||||||| ||||  |||  ||||| ||||||| |||||||||||    
T  12734413 ataattaatgatggtgggattcacttagtgatagg-tccattatctagtttttgtttctatctctct 12734478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 19757168 - 19757126
Alignment:
Q  184 aaaaaggtggtaggactcacctatttttattctctcttcacaa 226  Q
    |||||||||||||  | ||||||||||||||||||||||||||    
T  19757168 aaaaaggtggtagagcccacctatttttattctctcttcacaa 19757126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 181
Target Start/End: Original strand, 21151149 - 21151273
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21151149 taaaatataattaatgatggtgggacccacttagtggtaggatcctccatctatttcttgtgtctatctctctccaacttgcaaaactccatttattttg 21151248  T
Q  157 ccaaatggagaggatcttcgcccaa 181  Q
    ||||||||||||||||||| |||||    
T  21151249 ccaaatggagaggatcttcacccaa 21151273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 9559132 - 9559009
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  9559132 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtatctatctctctccaacttgcaaatctccatttattttg 9559033  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||||||| ||||    
T  9559032 ccaaatggagaggatcttcaccca 9559009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 16366515 - 16366633
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  16366515 taaaatataattaatgatggtgggacacacttagtggtaggatccaccatctatttcttatgtctatctctctccaacttgcaaaactccatttattttg 16366614  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||||||||||||||||    
T  16366615 tcaaatggagaggatcttc 16366633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 4888464 - 4888582
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4888464 taaaatataattaatgatggtgggacctacttagtggtaggacccactatctattttttgtgtctatctctctccaacttgcaaatctccatttattttg 4888563  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||||||||||||||||    
T  4888564 tcaaatggagaggatcttc 4888582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 18198253 - 18198371
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||    
T  18198253 taaaatataattaatgatggtgggactcacttagtggcagaacccaccatctattttttgtgtctatttatctccaatttgcaaaactccatttattttg 18198352  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  18198353 ccaaatggagaggatcttc 18198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 45260505 - 45260387
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||| |||||  ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45260505 taaaatataattaatgatgatgggatccacttagtggtaggatccacaatctattttttgtgtctatctctctccaacttgcaaaactcaatttattttg 45260406  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  45260405 ccaaatggagaggatcttc 45260387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 44647959 - 44648079
Alignment:
Q  57 taaaatataattaatgatggtggga--ctcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattt 154  Q
    |||||||||||||||||||| ||||  | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44647959 taaaatataattaatgatggagggagacccacttagtggtcggatccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattt 44648058  T
Q  155 tgccaaatggagaggatcttc 175  Q
    || ||||||||||||||||||    
T  44648059 tgtcaaatggagaggatcttc 44648079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 12139323 - 12139442
Alignment:
Q  57 taaaatataattaatgatggtgggactc-acttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    |||||||||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12139323 taaaatataattaatgatggtgggaccccacttaatggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttatttt 12139422  T
Q  156 gccaaatggagaggatcttc 175  Q
    |||||||| |||| ||||||    
T  12139423 gccaaatgaagagaatcttc 12139442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 47226152 - 47226036
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| || |||||||| ||| |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47226152 taaaatataattaatgatggtgggacccatttagtggtgggacccaccat--attttttgtgtttatctctctccaacttgcaaaactccatttattttg 47226055  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  47226054 ccaaatggagaggatcttc 47226036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 7362565 - 7362676
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| || || ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7362565 taaaatataattaatgatggtggaacccatttagtggtacgacccaccatctattttttgtgtctatctctctccaatttgcaaaactccatttattttg 7362664  T
Q  157 ccaaatggagag 168  Q
     |||||||||||    
T  7362665 tcaaatggagag 7362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 25084806 - 25084690
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactcca--tttattt 154  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||  |  ||| |||    
T  25084806 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttacaaaactttattttttttt 25084707  T
Q  155 tgccaaatggagaggat 171  Q
    | |||||||||||||||    
T  25084706 ttccaaatggagaggat 25084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 33450503 - 33450621
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  33450503 taaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttatttt 33450602  T
Q  156 gccaaatggagaggatctt 174  Q
      |||||||||||||||||    
T  33450603 agcaaatggagaggatctt 33450621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 183 - 273
Target Start/End: Original strand, 43637918 - 43638008
Alignment:
Q  183 taaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||    
T  43637918 taaaaaggtggtagggcccacctatttttattctctcttcacaagttcattgccatccaaacaagagaagtatgatacttctcctctattt 43638008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 183 - 273
Target Start/End: Complemental strand, 46459561 - 46459471
Alignment:
Q  183 taaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    ||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||    
T  46459561 taaaaaggtggtagggcccacctatttttattctctcttcacaagttctttgccatccaaacaagagaagtatgatacttcttctctattt 46459471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 47500361 - 47500243
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||| |||||||||||||||||||||| || |||||||| |||||||||    
T  47500361 taaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctctccaaattacaaaactcaatttatttt 47500262  T
Q  156 gccaaatggagaggatctt 174  Q
       ||||||||||||||||    
T  47500261 agtaaatggagaggatctt 47500243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 34986024 - 34985909
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| ||||||||| ||||||||  || |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||    
T  34986024 taaaaaataattaatgatgatgggactcatttagtggtttgacccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttatttt 34985925  T
Q  156 gccaaatggagaggat 171  Q
      ||||| ||||||||    
T  34985924 agcaaattgagaggat 34985909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 989132 - 989239
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    ||||||||| ||||| ||||  |||||||||||||| |||| || |||||||||||||||||||||||||| |||| |||||||||||| |||| |||||    
T  989132 ataattaattatggttggacctacttagtggtaggacccactatatattttttgtgtctatctctctccaaattgc-aaactccatttaatttgtcaaat 989230  T
Q  163 ggagaggat 171  Q
    |||||||||    
T  989231 ggagaggat 989239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 39855891 - 39855775
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||| |||||||||||| |||||| ||||||||||||||| | ||||||| |||| ||||||||||||||||||| || | |||||||||||| ||||    
T  39855891 taaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatcttttttatgtgtctatctctctccaaattac-aaactccatttaatttg 39855793  T
Q  157 ccaaatggagaggatctt 174  Q
     |||||| |||| |||||    
T  39855792 tcaaatgaagagaatctt 39855775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 32915954 - 32916056
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgc 157  Q
    ||||||||||| |||||||||||||||||||| |||||||| |||| || |||||||||||||||||||||| ||| |||| |  ||||||||||||| |    
T  32915954 aaaatataattcatgatggtgggactcacttaatggtaggacccactatttattttttgtgtctatctctcttcaaattgc-atcctccatttattttac 32916052  T
Q  158 caaa 161  Q
    ||||    
T  32916053 caaa 32916056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 47271180 - 47271108
Alignment:
Q  102 accatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||    
T  47271180 accatcaattttttgtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttc 47271108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 47799978 - 47799895
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||| ||  |||||||||||||||||||||||||| ||||||    
T  47799978 taaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 47799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 29631051 - 29631156
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 162  Q
    |||||||||||| |||||||  || ||||||| ||| |||| |||||| |||||||||||  ||||| ||| |||| |||||||||||||||| ||||||    
T  29631051 ataattaatgatagtgggacctacatagtggttggacccactatctatgttttgtgtcta--tctcttcaaattgc-aaactccatttattttaccaaat 29631147  T
Q  163 ggagaggat 171  Q
    |||||||||    
T  29631148 ggagaggat 29631156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 63 - 167
Target Start/End: Complemental strand, 33608949 - 33608845
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaaaactccatttattttgccaaa 161  Q
    ||||||||||||||||| |||||| | || |||| | |  ||||||||||||| |||| ||||||||||||| ||||||| ||||||||||||| |||||    
T  33608949 ataattaatgatggtggaactcacctggtagtagtatcttccatctatttttttgtgtttatctctctccaaattgcaaa-ctccatttattttaccaaa 33608851  T
Q  162 tggaga 167  Q
    ||||||    
T  33608850 tggaga 33608845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 46802403 - 46802336
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    |||||||| | ||||||||| ||||||||||||||| ||||| |||||||||| ||||||||||||||    
T  46802403 ataattaacggtggtgggacccacttagtggtaggacccaccgtctattttttatgtctatctctctc 46802336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 30588532 - 30588615
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||  ||  ||||||||||||||||||||  |||| ||||||    
T  30588532 taaaaaataattaatgatggtgggacccacttagtgataggacccgtcacttattttttgtgtctatctcttcccaaattgcaa 30588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 19027751 - 19027685
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaa 133  Q
    ||||||||||||||  ||||||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 19027685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 20726885 - 20726951
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaa 133  Q
    ||||||||||||||  ||||||||| ||||| ||||||| || ||||||||||||||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccatttatttttttgtgtctatctctctccaa 20726951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 28528549 - 28528631
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||| ||||||||||||||||||| || ||||||| |||||  |||||  | |||||| ||||||||||||||||| ||||||    
T  28528549 aaaaaataattaatgatggtgggattcgcttagtgataggactcaccacttgttttttttgtctatctctctccaaattgcaa 28528631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 14696825 - 14696752
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  |||||||| |||||||||||||||||| ||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 14696752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 19889112 - 19889029
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| ||||||||||||||||| || ||||||||| ||||| |||| |  |||||||||| ||||||||| || || ||||||    
T  19889112 taaaaaataattaatgatggtggaacccacttagtgataggacccacaacttattttttgtatctatctctttctaaattgcaa 19889029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Original strand, 30102501 - 30102574
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatcta-ttttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  || |||||| ||||||||||||||||| ||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccaccacttatttttttttgtctatctctctccaaattgcaa 30102574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 35737128 - 35737193
Alignment:
Q  75 ggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||||||| ||| ||||| | ||| ||||||  |||||||||||||||||||||||||| ||||||    
T  35737128 ggtgggacccacctagtgatgggacccaccacttattttttgtgtctatctctctccaaattgcaa 35737193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 41988520 - 41988589
Alignment:
Q  204 ctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    ||||||||||||||||||||| |  ||||||  ||||||||||||||||| | ||||| ||| |||||||    
T  41988520 ctatttttattctctcttcacgaactctttgtcatccaaacaagagaagtataatactcctcttctattt 41988589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 133
Target Start/End: Original strand, 29844316 - 29844364
Alignment:
Q  85 acttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    |||||||||||| | |||| ||||||||| |||||||||||||||||||    
T  29844316 acttagtggtagaacccactatctattttatgtgtctatctctctccaa 29844364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 47080433 - 47080509
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccacca-tctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||||||||||||||||| | ||||||| ||||| ||| || |   |||||||||||||||||||||||| ||||||    
T  47080433 aattaatgatggtgggacccgcttagtgataggacccatcacttgtttttttgtgtctatctctctccaaattgcaa 47080509  T

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Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 7712438 - 7712329
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||| |||||||| || |||||| ||||||||  ||| |||||| || ||| |||||||||||| || |||||    ||||||||||||   |||||    
T  7712438 taattaaagatggtggcacccacttaatggtaggactcactatctatcttatgtctctatctctctctaaattgcatct-tccatttatttttataaatg 7712340  T
Q  164 gagaggatctt 174  Q
    |||||||||||    
T  7712339 gagaggatctt 7712329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 32916166 - 32916236
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    ||||| ||||||||||||||||| |  |||||||||||| || |||| | |||||||| |||| |||||||    
T  32916166 taaaaaataattaatgatggtggaatccacttagtggtatgacccacaacctatttttcgtgtgtatctct 32916236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 676094 - 676030
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    |||||||||||||||| |||||| ||| || |||||  |||||  |||||||||||| |||||||    
T  676094 ataattaatgatggtgagactcatttaatgataggaatcaccacatattttttgtgtttatctct 676030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 115
Target Start/End: Complemental strand, 23142619 - 23142567
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctatttttt 115  Q
    |||||||||  ||||||||||||||||||||||  | |||| |||||||||||    
T  23142619 ataattaatagtggtgggactcacttagtggtataatccactatctatttttt 23142567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 104; Significance: 7e-52; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 30426747 - 30426624
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30426747 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacaccatttattttg 30426648  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||| ||||| ||||    
T  30426647 ccaaatggagagggtcttcaccca 30426624  T

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Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 28069716 - 28069834
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28069716 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctattttttgtgtctttctctctccaacttgcaaatctccatttattttg 28069815  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  28069816 ccaaatggagaggatcttc 28069834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 10672590 - 10672468
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  10672590 taaaatataattaatgatggtgggactcacttagtggtaggatccaccatctattttttgtgtctatc--tctccaacttgcaaaactccatttattttg 10672493  T
Q  157 ccaaatggagaggatcttcgcccaa 181  Q
    |||||||||||| |||||| |||||    
T  10672492 ccaaatggagagaatcttcacccaa 10672468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 36991355 - 36991471
Alignment:
Q  59 aaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgcc 158  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  36991355 aaatataattaatgatggtgggacccacttagtggtaggacccatcatctatttcttatgtctatctctctccaacttgcaaaactccatttattttgcc 36991454  T
Q  159 aaatggagaggatcttc 175  Q
    |||||||||||||||||    
T  36991455 aaatggagaggatcttc 36991471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 40695325 - 40695208
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||| |||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  40695325 taaaatataactaatgatggtggaactcacttagtggtaggacctaccatctattttttgtgtctatctctctccaactt-ccaaactccatttattttg 40695227  T
Q  157 ccaaatggagaggatcttc 175  Q
    | ||||||||| |||||||    
T  40695226 ctaaatggagaagatcttc 40695208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 10652694 - 10652577
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgc 157  Q
    ||||||||||||||||||||||||| || ||||| ||| || |||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |    
T  10652694 aaaatataattaatgatggtgggacccaattagtagtatgacccaccatcaattttttgtatctatctctctccaacttgcaaaacaccatttattttac 10652595  T
Q  158 caaatggagaggatcttc 175  Q
    ||||||||||||||||||    
T  10652594 caaatggagaggatcttc 10652577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 44859245 - 44859129
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||    
T  44859245 taaaatataattaatgatggtgggacccacttagtggtagaacccaccatctatttttagt--ctatctctctctaacttgcaaaactccatttattttg 44859148  T
Q  157 ccaaatggagaggatcttc 175  Q
     ||||| ||||||||||||    
T  44859147 tcaaatagagaggatcttc 44859129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 41511259 - 41511373
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| |  ||||||||| ||||| |||| ||||||||||| | ||||||||| ||||||||||||||||||||||||||||    
T  41511259 taaaatataattaatgatggtggaaaccacttagtgataggacccactatctattttttatatctatctctttccaacttgcaaaactccatttattttg 41511358  T
Q  157 ccaaatggagaggat 171  Q
      ||| |||||||||    
T  41511359 ttaaacggagaggat 41511373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 45113267 - 45113385
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||| |||||||||||| ||||||||| ||||||||| | |||||||||    
T  45113267 taaaaaataattaatgatgatgggacacacttagtggttggacccaccatctattcttttgtgtctatgtctctccaaattgcaaaacacaatttatttt 45113366  T
Q  156 gccaaatggagaggatctt 174  Q
      |||||||||||||||||    
T  45113367 agcaaatggagaggatctt 45113385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 24102015 - 24102099
Alignment:
Q  59 aaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaac 143  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||  ||||||||||||    
T  24102015 aaatataattaatgatggtggaactcacttagtggtaggatccaccatctattttttatgtctatctctcttaaacttgcaaaac 24102099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 28318980 - 28318856
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatct------attttttgtgtctatctctctccaacttgcaaaactccattt 150  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||| ||||      ||||||| ||| |||||||||| |||||||||||||||||||    
T  28318980 taaaatataattaatgatggttggacccacttagtggtaggacccactatctttttttattttttttgtatatctctctcaaacttgcaaaactccattt 28318881  T
Q  151 attttgccaaatggagaggatcttc 175  Q
    ||||| ||||||  ||| |||||||    
T  28318880 attttaccaaataaagaagatcttc 28318856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 5033310 - 5033367
Alignment:
Q  118 gtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttc 5033367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 37966520 - 37966405
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||| |  ||||  ||| |||||||||||| | || ||||||||||||||| ||||||||| ||| |||||||  |||||||||||||    
T  37966520 taaaatataattaatggtattgggt-tcaattagtggtaggacctacaatctattttttgtgtttatctctcttcaaattgcaaat-tccatttattttg 37966423  T
Q  157 ccaaatggagaggatctt 174  Q
    ||||||||||||||||||    
T  37966422 ccaaatggagaggatctt 37966405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 26749626 - 26749543
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||| ||  |||||||||||||||||||||||||| ||||||    
T  26749626 taaaaaataattaatgatggtgggacccacttagtgataggacccatcacttattttttgtgtctatctctctccaaattgcaa 26749543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 6014191 - 6014309
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||  | |||  |||||| |||||||| | | |||||||| |||||||||||||| ||||||| ||||||||||| |||||||||    
T  6014191 taaaacataattaatgataataggatccacttaatggtaggacctatcatctattcttttgtgtctatctttctccaaattgcaaaactctatttatttt 6014290  T
Q  156 gccaaatggagaggatctt 174  Q
      |||||||||||||||||    
T  6014291 agcaaatggagaggatctt 6014309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 34612562 - 34612634
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    |||| |||||||||||||||| ||| ||||||||| ||||| ||||||  |||||||||||||||||||||||    
T  34612562 aaaaaataattaatgatggtgagacccacttagtgataggacccaccacttattttttgtgtctatctctctc 34612634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 42761710 - 42761808
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| ||| || |||| |||||||||| |||| ||||||||| ||||||||||||||| ||| ||||  |  ||||||||||||    
T  42761710 taaaaaataattaatgatgatggaacccactgagtggtaggatccactatctattttatgtgtctatctctcttcaaattgcgtacttccatttatttt 42761808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 12177625 - 12177572
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaact 144  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  12177625 tggtgggatccaccatctattttttgtatctatctctctccaacttgcaaaact 12177572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 12422053 - 12422000
Alignment:
Q  91 tggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaact 144  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  12422053 tggtgggatccaccatctattttttgtatctatctctctccaacttgcaaaact 12422000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 1937233 - 1937149
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccacca-tctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| | ||||||| ||||| |||||| |   |||||||||||||||||||||||| ||||||    
T  1937233 taaaaaataattaatgatggtgggacccgcttagtgataggacccaccacttgtttttttgtgtctatctctctccaaattgcaa 1937149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 18689495 - 18689597
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||| ||| || |||||| |||||||| |||| ||||||||| | ||| ||||||||||||| |||| | | |||||||||||||| ||||     
T  18689495 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgc-atattccatttattttgctaaatc 18689593  T
Q  164 gaga 167  Q
    ||||    
T  18689594 gaga 18689597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 126
Target Start/End: Original strand, 5033108 - 5033150
Alignment:
Q  84 cacttagtggtaggagccaccatctattttttgtgtctatctc 126  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  5033108 cacttagtggtaggacccaccatctattttttgtgtctatctc 5033150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 17867727 - 17867654
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  |||||||| |||||||||||||||||| ||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 17867654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 130
Target Start/End: Original strand, 21486926 - 21486993
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    ||||||||||||||||||||||||||| | |||| | |||| || |||||||| | || |||||||||    
T  21486926 ataattaatgatggtgggactcacttaatagtagaacccactatatattttttatatccatctctctc 21486993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 139
Target Start/End: Complemental strand, 24557252 - 24557177
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgca 139  Q
    |||||||||||| ||||||||||||| |||||||| |||  | ||||||| ||| | ||||||| ||||| |||||    
T  24557252 taattaatgatgatgggactcacttaatggtaggacccattacctattttatgtctatatctctttccaaattgca 24557177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 6399921 - 6399991
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    ||||| ||||||||||||  |||||  ||||| ||  || || ||||||||||||||||||||||||||||    
T  6399921 taaaaaataattaatgataatgggatccacttggtaataagacccaccatctattttttgtgtctatctct 6399991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 30796275 - 30796344
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    ||||| |||||||||||||||||||| ||||||||| || || || |||| ||||||| | ||||||||||    
T  30796275 taaaaaataattaatgatggtgggacccacttagtgata-gacccgccatttatttttagcgtctatctct 30796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 133
Target Start/End: Complemental strand, 36748563 - 36748494
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaa 133  Q
    |||||||||||||||||||  |||||| |||||||| || |  |||| ||||||||||||||| |||||||    
T  36748563 ataattaatgatggtgggatccacttaatggtaggacccgctgtcta-tttttgtgtctatctatctccaa 36748494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 42503954 - 42503990
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||||||||| |||||||||||||||||| |||||    
T  42503954 taaattgaggaagcctaaatggagcaaagatggactc 42503990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 208060 - 208178
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  208060 taaaatataattaatgatgatgggacccacttagtggtaggacccaccatctattttttgtgtttatctctctccaacttgcaaaactccatttattttg 208159  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  208160 ccaaatggagaggatcttc 208178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 19830509 - 19830386
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  19830509 taaaatataattaatgatggtgggacccacttaatggtaggacccaccatctattttttgtgtctatttctccccaacttgcaaaactccatttattttg 19830410  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||||||| ||||    
T  19830409 ccaaatggagaggatcttcaccca 19830386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 43720025 - 43719901
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43720025 taaaatataattaatgatggtgggacccacttagtggtaggacccacaatttattttttgtgtctatctctctccaacttgcaaaactccatttattttg 43719926  T
Q  157 ccaaatggagaggatcttcgcccaa 181  Q
      ||||||||||||||||| |||||    
T  43719925 ttaaatggagaggatcttcacccaa 43719901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 2229980 - 2230103
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| |  ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2229980 taaaatataattaatgatggtggaaaccacttagtggtaggacccatcatctattttttgtgtctatctctctccaacttgcaaaactccaattattttg 2230079  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    ||||||||||||||| ||| ||||    
T  2230080 ccaaatggagaggatgttcaccca 2230103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 27033648 - 27033771
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||     
T  27033648 taaaatataattaatgatggtgggatccacttagtggtaggacccaccatctatttcttgtgtctatctctctccaacttgcaaaactccatttatttta 27033747  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
     |||||||||| ||||||| ||||    
T  27033748 tcaaatggagatgatcttcaccca 27033771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 57 - 180
Target Start/End: Original strand, 34373828 - 34373951
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||||||  | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  34373828 taaaatataattaatgatggtgggacctaattagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaacacaatttattttg 34373927  T
Q  157 ccaaatggagaggatcttcgccca 180  Q
    |||||||||||| |||||| ||||    
T  34373928 ccaaatggagagaatcttcaccca 34373951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 57 - 171
Target Start/End: Original strand, 46167390 - 46167504
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||| ||||| |||  ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  46167390 taaaatataattaataatggtaggatccacttagtggtaggacccaccatatattttttgtgtctatctctctccaacttacaaaactccatttattttg 46167489  T
Q  157 ccaaatggagaggat 171  Q
    | |||||||||||||    
T  46167490 ctaaatggagaggat 46167504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 57 - 161
Target Start/End: Complemental strand, 34373663 - 34373559
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||| ||||||||||    
T  34373663 taaaatataattaatgatggtgggacccacttagtggtaggacccaccatctatttttagtgtctatctctatggaacttgcaaaactctatttattttg 34373564  T
Q  157 ccaaa 161  Q
    |||||    
T  34373563 ccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 40851781 - 40851889
Alignment:
Q  67 ttaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggag 166  Q
    ||||||||||| |||| ||||||||||| | | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||    
T  40851781 ttaatgatggtaggacccacttagtggttgaacccaccatctattttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgag 40851880  T
Q  167 aggatcttc 175  Q
    |||||||||    
T  40851881 aggatcttc 40851889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 24754673 - 24754772
Alignment:
Q  76 gtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    ||||||| |||||||||||||||   |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24754772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 175
Target Start/End: Original strand, 24763670 - 24763769
Alignment:
Q  76 gtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    ||||||| |||||||||||||||   |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgtgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttc 24763769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 155
Target Start/End: Original strand, 12402963 - 12403061
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||||||||||||| |||||||||||||||||||||||| | |||||||||| ||||| | ||||||||||||||||||||||||||| |||||||||    
T  12402963 taaaatataattaataatggtgggactcacttagtggtagaatccaccatctaatttttatatctatctctctccaacttgcaaaactctatttatttt 12403061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 174
Target Start/End: Original strand, 48084816 - 48084934
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    ||||| ||||||||||||| |||||| ||||||||||| ||| |||||||||||| ||||||||||||||||| |||| ||||||||||| |||||||||    
T  48084816 taaaaaataattaatgatgatgggacccacttagtggttggacccaccatctattcttttgtgtctatctctccccaaattgcaaaactcaatttatttt 48084915  T
Q  156 gccaaatggagaggatctt 174  Q
      |||||||||||||||||    
T  48084916 agcaaatggagaggatctt 48084934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 550894 - 550790
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||| |||| |||||||||| |||||| || ||||| |||||||||||||||||| | ||||| ||||||| |||| |||||||||||||||||    
T  550894 taaaatataaataataatggtgggacccacttaatgataggatccaccatctattttttgtatatatctttctccaaattgc-aaactccatttattttg 550796  T
Q  157 ccaaat 162  Q
    ||||||    
T  550795 ccaaat 550790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 31523746 - 31523663
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||  ||||| ||||||  |||||||||||||||||||||||||| ||||||    
T  31523746 taaaaaataattaatgatggtgggacccacttagtaataggacccaccacttattttttgtgtctatctctctccaaattgcaa 31523663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 566852 - 566746
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaaaactccatttatttt 155  Q
    |||||||||| |||| | |||||||| |||||| || ||||| || |||| |||||||| || ||||||||||||||| ||||||| |||||||||||||    
T  566852 taaaatataaataataaaggtgggacccacttaatgataggatccgccatatatttttttgtatctatctctctccaaattgcaaa-ctccatttatttt 566754  T
Q  156 gccaaatg 163  Q
    ||||||||    
T  566753 gccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 42613077 - 42613160
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||||||  |||||||| ||||||||||||| ||| ||||||    
T  42613077 taaaaaataattaatgatggtgggacccacttagtgataggacccaccacttattttttttgtctatctctcttcaaattgcaa 42613160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 49679348 - 49679265
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||| || |||||| ||||| || |||  |||||||||||||||||||||||||| ||||||    
T  49679348 taaaaaataattaatgatggtgggacccatttagtgataggacccgccacttattttttgtgtctatctctctccaaattgcaa 49679265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 24647905 - 24647958
Alignment:
Q  127 tctccaacttgcaaaactccatttattttgccaaatggagaggatcttcgccca 180  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccca 24647958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 172
Target Start/End: Complemental strand, 10474509 - 10474402
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||| |||||| ||||||||| | |||||| |||  ||||||||| ||||||||| |||||| || ||||| | ||||||||||| || |||||     
T  10474509 taattaatgttggtggaactcacttaatagtaggatccattatctattttatgtgtctatatctctcaaaattgcata-ctccatttattatgtcaaata 10474411  T
Q  164 gagaggatc 172  Q
    |||||||||    
T  10474410 gagaggatc 10474402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 28229472 - 28229365
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatgg 164  Q
    |||||||||||||| |||||| ||| || |||||  ||||| ||||||||||||||||| ||| ||| | |||| | ||||||||||||||   ||||||    
T  28229472 aattaatgatggtgagactcatttaatgataggactcaccacctattttttgtgtctatatctttcctaattgc-acactccatttattttaataaatgg 28229374  T
Q  165 agaggatct 173  Q
    |||||||||    
T  28229373 agaggatct 28229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 29586340 - 29586449
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    ||||||||||||||| ||| |||||| | ||| ||   || ||||||||| |||||||||||||||||||  ||| | |||||||||||| ||| |||||    
T  29586340 taattaatgatggtgagacccacttaatagtaagacttactatctattttatgtgtctatctctctccaaactgc-atactccatttattatgctaaatg 29586438  T
Q  164 gagaggatctt 174  Q
     ||||||||||    
T  29586439 aagaggatctt 29586449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 174
Target Start/End: Original strand, 33632855 - 33632935
Alignment:
Q  93 gtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||||| |||| ||||||||| ||||||||||||||||||| |||| |  ||||||||||| | ||||||||||| ||||||    
T  33632855 gtaggatccactatctattttatgtgtctatctctctccaaattgc-atgctccatttattataccaaatggagaagatctt 33632935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 40810434 - 40810357
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaa 133  Q
    ||||| ||||||||||||| |||||| |||||||||||  || |||||||||||| |||| ||| |||||||||||||    
T  40810434 taaaaaataattaatgatgatgggacccacttagtggttagacccaccatctattcttttttgtttatctctctccaa 40810357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 1995441 - 1995513
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    ||||| |||||||||||||||| |||||||||| ||||||||  ||  ||||||||| | |||||||||||||    
T  1995441 taaaaaataattaatgatggtgagactcacttattggtaggactcattatctattttctatgtctatctctct 1995513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 207 - 265
Target Start/End: Original strand, 8322728 - 8322786
Alignment:
Q  207 tttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctc 265  Q
    ||||||||||||| |||||| ||||||||||| |||||| ||||| | |||||||||||    
T  8322728 tttttattctctcctcacaaattctttgctattcaaacaggagaaatatgatacttctc 8322786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 54911658 - 54911723
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    |||||||||||||||| ||||| ||| |||||||| |||| | ||||||| ||| |||||||||||    
T  54911658 taattaatgatggtggaactcatttaatggtaggacccactacctattttatgtctctatctctct 54911723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 25285907 - 25285843
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    |||| ||||||||||| |||| ||| || ||||| |||| ||||||||| |||||||||||||||    
T  25285907 aattgatgatggtgggtctcatttaatgataggatccactatctattttatgtgtctatctctct 25285843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 48950613 - 48950671
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtct 121  Q
    |||||||||||||||| |||||| ||| || ||||| |||||| ||||||| |||||||    
T  48950613 ataattaatgatggtgagactcatttaatgataggatccaccacctattttatgtgtct 48950671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 51982656 - 51982547
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||| | | ||||||||| || ||| | |||| | ||||||| ||| ||||||||||||||| |||||    ||||||||||||   |||||    
T  51982656 taattaatgatgatagaactcacttaatgatagaacccactaactattttatgtatctatctctctccaaattgcatct-tccatttatttttataaatg 51982558  T
Q  164 gagaggatctt 174  Q
    |||||||||||    
T  51982557 gagaggatctt 51982547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 30235489 - 30235418
Alignment:
Q  100 ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 172  Q
    |||| ||||||||||| ||||||||||||| ||| |||| | ||||||||||||||  |||||| ||| ||||    
T  30235489 ccacaatctattttttatgtctatctctcttcaaattgc-atactccatttattttaacaaatgaagatgatc 30235418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 33979937 - 33980001
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctct 127  Q
    |||||||||||| ||| |||| | ||| || |||||  |||||| ||||||||||||||||||||    
T  33979937 ataattaatgatagtgagacttatttaatgataggattcaccatttattttttgtgtctatctct 33980001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 40809615 - 40809579
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  40809615 taaattgaggaaacccaaatggagcaaagatacactc 40809579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44311429 - 44311393
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||||||||||| ||||| ||||||||||||||||    
T  44311429 taaattgaggaaacataaatagagcaaagatagactc 44311393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44312401 - 44312437
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||||||||||| |||||||||||||||| |||||    
T  44312401 taaattgaggaaacataaatggagcaaagatggactc 44312437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 7e-49; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 50484383 - 50484501
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||| |||||||| ||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50484383 taaaatataattaatgacggtgggacccacttagtggttgtacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 50484482  T
Q  157 ccaaatggagaggatcttc 175  Q
    |||||||||||||||||||    
T  50484483 ccaaatggagaggatcttc 50484501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 12151764 - 12151882
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  12151764 taaaatataattaatgatggtgggacccacttagtggtaggacccacaatctattttttgtgtctttctctctccaactggcaaaactccatttattttg 12151863  T
Q  157 ccaaatggagaggatcttc 175  Q
    ||||||||||| |||||||    
T  12151864 ccaaatggagaagatcttc 12151882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 50294141 - 50294023
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50294141 taaaatataattaatgatggtaggatccacttagtggtaggacccaccatctattttttgtgtctatctctctccaacttgcaaatctccatttattttg 50294042  T
Q  157 ccaaatggagaggatcttc 175  Q
    ||||||| |||||||||||    
T  50294041 ccaaatgaagaggatcttc 50294023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 48327231 - 48327114
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||||| || |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  48327231 taaaatataattaatgatggtgg-acccacttagtggtaggactcaccatctattttttttgtctatctctctccaacttgcaaatctccatttattttg 48327133  T
Q  157 ccaaatggagaggatcttc 175  Q
    ||||||||||| |||||||    
T  48327132 ccaaatggagatgatcttc 48327114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 23862033 - 23861907
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggag---ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatt 153  Q
    |||||||||||||||||||||||||  |||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23862033 taaaatataattaatgatggtgggatccacttagtggtaggattcaccaccatctattttttgtgtctatctctctccaacttgcaaaacttcatttatt 23861934  T
Q  154 ttgccaaatggagaggatcttcgccca 180  Q
    |||| |||| |||||||| ||| ||||    
T  23861933 ttgctaaatagagaggatattcaccca 23861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 40328275 - 40328394
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||| |||||||||||| || ||||||||||| ||| ||||||||||||||| |||||||||||||  ||| ||||||||||||||||||||||    
T  40328275 taaaatataactaatgatggtggaacccacttagtggtgggacccaccatctattttt-gtgtctatctctc--caatttgcaaaactccatttattttg 40328371  T
Q  157 ccaaatggagaggatcttcgccc 179  Q
    |||||||||||||||||||||||    
T  40328372 ccaaatggagaggatcttcgccc 40328394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 12380907 - 12380837
Alignment:
Q  105 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12380907 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 12380837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 12384974 - 12384904
Alignment:
Q  105 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12384974 atctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 12384904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 18976377 - 18976265
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctatt-ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaa 161  Q
    ||||||||||||| ||||||  ||||| |||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||  ||||    
T  18976377 ataattaatgatgatgggacctacttaatggttggatccaccatctattcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaa 18976278  T
Q  162 tggagaggatctt 174  Q
    |||||||||||||    
T  18976277 tggagaggatctt 18976265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 7840739 - 7840634
Alignment:
Q  75 ggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||||||| | |||| |||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||| | ||||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttcttgtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatctt 7840640  T
Q  175 cgccca 180  Q
    | ||||    
T  7840639 caccca 7840634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 45978045 - 45978120
Alignment:
Q  100 ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  45978045 ccaccatctattttttgtatctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttc 45978120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 65 - 171
Target Start/End: Complemental strand, 32361377 - 32361271
Alignment:
Q  65 aattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatgg 164  Q
    ||||||||||| ||||||  ||||||| |||||| ||||||||||| ||||||||| ||||||||||||||| |||||||| | ||||||  ||||||||    
T  32361377 aattaatgatgatgggacctacttagtagtaggatccaccatctatcttttgtgtccatctctctccaacttacaaaactctaattatttcaccaaatgg 32361278  T
Q  165 agaggat 171  Q
    |||||||    
T  32361277 agaggat 32361271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 12380988 - 12380924
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtct 121  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12380988 taaaatataattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 12385055 - 12384991
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtct 121  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  12385055 taaaatataattaatgatggtgggactcacttagtggtagaacccaccatctattttttgtgtct 12384991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 24977237 - 24977343
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    |||||||||| ||||||| |||| || ||||||||||||||| ||||||||||||||||||||||||||||||| || |||  ||||  |||||||||||    
T  24977237 taaaatataactaatgattgtggaacccacttagtggtaggatccaccatctattttttgtgtctatctctctctaaattg-taaacatcatttattttg 24977335  T
Q  157 ccaaatgg 164  Q
    | ||||||    
T  24977336 ctaaatgg 24977343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 184 - 273
Target Start/End: Original strand, 46086133 - 46086222
Alignment:
Q  184 aaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctcctctattt 273  Q
    |||||||||||||| | |||||||||||||||||| |||||||  ||||| |||||||||||| ||||||||| |||||||| |||||||    
T  46086133 aaaaaggtggtagggcccacctatttttattctctattcacaaactctttcctatccaaacaacagaagtttgttacttctcttctattt 46086222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 46600822 - 46600903
Alignment:
Q  184 aaaaaggtggtaggactcacctatttttattctctcttcacaatttctttgctatccaaacaagagaagtttgatacttctc 265  Q
    ||||||||||||||   ||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| ||||||||    
T  46600822 aaaaaggtggtagggtccacctatttttattctctcttcacaaactctttcctatccaaacaagagaagtttgttacttctc 46600903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 30077722 - 30077639
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||| ||||||||||||||||| ||| | ||||||  |||||||||||||||||||||||||| ||||||    
T  30077722 taaaaaataattaatgatagtgggactcacttagtgatagaacccaccacttattttttgtgtctatctctctccaaattgcaa 30077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 39426207 - 39426317
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||| |||||||||||| ||||||| || |||||||||||| |||| ||||||||| ||||||||||||||||||| |||   |  ||||||||||||     
T  39426207 taaaaaataattaatgatagtgggacccaattagtggtaggacccactatctattttatgtgtctatctctctccaaattgtgtacttccatttatttta 39426306  T
Q  157 ccaaatggaga 167  Q
     ||||||||||    
T  39426307 tcaaatggaga 39426317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 140
Target Start/End: Complemental strand, 52280117 - 52280034
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||| |||||||||||||||||||  ||||||||| ||||| ||||||  |||||||| ||||||||||||||||| ||||||    
T  52280117 taaaaaataattaatgatggtgggatccacttagtgataggacccaccacttattttttatgtctatctctctccaaattgcaa 52280034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 24413354 - 24413291
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctc 126  Q
    |||||||||||||||||||| || ||| || ||||| |||||||| ||||||||||||||||||    
T  24413354 ataattaatgatggtgggacccatttaatgataggacccaccatccattttttgtgtctatctc 24413291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 1228563 - 1228501
Alignment:
Q  112 ttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 174  Q
    |||||||||| ||||||||||| |||||||||||||||||||||   ||||| ||||||||||    
T  1228563 ttttgtgtctgtctctctccaaattgcaaaactccatttattttagtaaatgaagaggatctt 1228501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 174
Target Start/End: Original strand, 32618805 - 32618913
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||||||||||  ||||| | |||||| |||| ||||| ||| | |||| |||||||||||| |||  | |||||||||||| |||||||||    
T  32618805 taattaatgatggtgggacctacttaatagtaggatccactatcta-tttatatgtccatctctctccaaattg-gatactccatttattatgccaaatg 32618902  T
Q  164 gagaggatctt 174  Q
     ||||||||||    
T  32618903 aagaggatctt 32618913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 30860794 - 30860741
Alignment:
Q  110 ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||    
T  30860794 ttttttatgtctatatctctccaacttgcaaaactccattcattttgctaaatg 30860741  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 63 - 139
Target Start/End: Complemental strand, 5047453 - 5047377
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgca 139  Q
    |||||||||||||||||||| ||| ||||||||||| |||  ||||||||| ||  || |||||||||||| |||||    
T  5047453 ataattaatgatggtgggacccacatagtggtaggatccattatctattttatgcatcaatctctctccaaattgca 5047377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 26860128 - 26860056
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    ||||| |||||||||||| ||||||  ||||||||| ||||| | || ||||||||| |||||||||||||||    
T  26860128 taaaaaataattaatgattgtgggatccacttagtgataggacctactatctattttatgtgtctatctctct 26860056  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 6948899 - 6948825
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccacca--tctattttttgtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  | |||||||| ||||||||||||||||| ||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccaccacttatattttttttgtctatctctctccaaattgcaa 6948825  T

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Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 63 - 130
Target Start/End: Complemental strand, 32887852 - 32887785
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    |||||||||||||||||||| || ||| |||||||| |||| || |||||| ||||||||||| ||||    
T  32887852 ataattaatgatggtgggacccatttaatggtaggatccactatttattttatgtgtctatctttctc 32887785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 18107389 - 18107316
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  || |||||| ||||| ||||||  |||||||| |||||||||||||||||| ||||||    
T  18107389 taatgatggtgggatccatttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 18107316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 7844992 - 7845043
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctatttttt 115  Q
    |||||||| |||||||||| ||||||||||||||| |||  |||||||||||    
T  7844992 taattaataatggtgggacacacttagtggtaggatccaatatctatttttt 7845043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 63 - 102
Target Start/End: Original strand, 23916089 - 23916128
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagcca 102  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  23916089 ataattaatgatggtgggacccacgtagtggtaggagcca 23916128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 46608455 - 46608409
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccac 103  Q
    ||||| |||||||||||||||||| | ||||||||||||||| ||||    
T  46608455 taaaaaataattaatgatggtgggtcccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 46045690 - 46045767
Alignment:
Q  63 ataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaa 140  Q
    |||||||||||||||||||  ||||||||| |||||  || ||  |||||||| |||  |||||||||||| ||||||    
T  46045690 ataattaatgatggtgggatacacttagtgataggactcatcacttattttttttgttcatctctctccaagttgcaa 46045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7338831 - 7338867
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagatagactc 37  Q
    |||||||||||||| |||||||||||||||| |||||    
T  7338831 taaattgaggaaacataaatggagcaaagatggactc 7338867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 26372249 - 26372321
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctct 129  Q
    ||||| |||||||||| ||||||||| |||||| |||||||| | |   ||||||||  ||||||||||||||    
T  26372249 taaaaaataattaatggtggtgggacccacttaatggtaggatctattgtctattttacgtgtctatctctct 26372321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 33441531 - 33441603
Alignment:
Q  58 aaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    |||| ||||||||||||| | ||||||| |||  | || || ||||||  |||||||||||||||||||||||    
T  33441531 aaaaaataattaatgatgataggactcaattaaagatatgatccaccacttattttttgtgtctatctctctc 33441603  T

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Target: scaffold0035 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 16475 - 16357
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16475 taaaatataattaatgatgatgggacccacttagtggtaggacccaccatttattttttgtgtctatctctctccaacttgcaaaactccatttattttg 16376  T
Q  157 ccaaatggagaggatcttc 175  Q
    || || |||||||||||||    
T  16375 cctaacggagaggatcttc 16357  T

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Target: scaffold0250 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 7144 - 7266
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactcc----atttat 152  Q
    ||||||||||||||||||||||| || |||||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||    ||||||    
T  7144 taaaatataattaatgatggtggaacccacttaatagtaggacccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttatttat 7243  T
Q  153 tttgccaaatggagaggatcttc 175  Q
    |||||||||||||||||||||||    
T  7244 tttgccaaatggagaggatcttc 7266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 9276 - 9156
Alignment:
Q  60 aatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgcca 159  Q
    |||||||||||||||||||| |  ||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9276 aatataattaatgatggtggaatccacttagtggttggacccaccatctattttctgtgtctatctctctccaacttgcaaatctccatttattttgcca 9177  T
Q  160 aatggagaggatcttcgccca 180  Q
    |||||||| ||||||| ||||    
T  9176 aatggagatgatcttcaccca 9156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 22520 - 22404
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||| || |||| |||||||||||||||||| |||| ||||||||||||||||||||||| |  || |||| |||||||||||||||||    
T  22520 taaaatataattaattattgtggaactcacttagtggtaggatccactatctattttttgtgtctatctctttgtaaattgc-aaactccatttattttg 22422  T
Q  157 ccaaatggagaggatctt 174  Q
    | ||||| ||||||||||    
T  22421 ctaaatgcagaggatctt 22404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 6513 - 6396
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttg 156  Q
    ||||||||||||||||||||| | || || ||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||  |||||||||||     
T  6513 taaaatataattaatgatggttgtacccatttagttgtaggacccaccatctattttttgtgtctgtctctttccaacttgcaaaatcccatttatttta 6414  T
Q  157 ccaaatggagaggatctt 174  Q
    | |||| |||||||||||    
T  6413 cgaaatagagaggatctt 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 73892 - 73817
Alignment:
Q  100 ccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||    
T  73892 ccaccatctatattttgcgtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 13710 - 13795
Alignment:
Q  91 tggtaggagccaccatctattttttgt-gtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttc 175  Q
    |||| ||| |||||||||||||||| | |||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  13710 tggtgggacccaccatctatttttttttgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttc 13795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 17384 - 17311
Alignment:
Q  57 taaaatataattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctc 130  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||| ||  |||||||||||||||||||||||    
T  17384 taaaaaataattaatgatggtgggacccacttagtgataggacccagcacttattttttgtgtctatctctctc 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 58684 - 58786
Alignment:
Q  64 taattaatgatggtgggactcacttagtggtaggagccaccatctattttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatg 163  Q
    |||||||||||| ||| || |||||| |||||||| |||| ||||||||| | ||| ||||||||||||| |||| | | |||||||||||||| ||||     
T  58684 taattaatgatgatggaacccacttaatggtaggatccactatctattttatatgtttatctctctccaaattgc-atattccatttattttgctaaatc 58782  T
Q  164 gaga 167  Q
    ||||    
T  58783 gaga 58786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 4768 - 4695
Alignment:
Q  68 taatgatggtgggactcacttagtggtaggagccaccatctatttttt-gtgtctatctctctccaacttgcaa 140  Q
    ||||||||||||||  ||||||||| ||||| ||||||  |||||||| |||||||||||||||||| ||||||    
T  4768 taatgatggtgggatccacttagtgataggacccaccacttatttttttgtgtctatctctctccaaattgcaa 4695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 13274 - 13304
Alignment:
Q  1 taaattgaggaaacctaaatggagcaaagat 31  Q
    |||||||||||||||||||||||||||||||    
T  13274 taaattgaggaaacctaaatggagcaaagat 13304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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