View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5009_low_8 (Length: 351)

Name: NF5009_low_8
Description: NF5009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5009_low_8
NF5009_low_8
[»] chr4 (17 HSPs)
chr4 (101-322)||(53958684-53958913)
chr4 (1-98)||(1535850-1535947)
chr4 (1-95)||(49284436-49284530)
chr4 (1-98)||(31377469-31377565)
chr4 (1-98)||(35019015-35019111)
chr4 (1-95)||(36851342-36851436)
chr4 (1-98)||(17888502-17888599)
chr4 (1-98)||(36012138-36012234)
chr4 (1-98)||(11054535-11054631)
chr4 (1-98)||(16338165-16338262)
chr4 (1-98)||(20818646-20818743)
chr4 (1-98)||(37801216-37801313)
chr4 (1-63)||(25954829-25954891)
chr4 (1-63)||(34241072-34241134)
chr4 (1-94)||(52632597-52632680)
chr4 (1-93)||(46583508-46583590)
chr4 (1-97)||(19124691-19124787)
[»] chr2 (10 HSPs)
chr2 (1-98)||(42769710-42769807)
chr2 (1-98)||(14186390-14186487)
chr2 (1-98)||(29846521-29846618)
chr2 (1-98)||(14941996-14942093)
chr2 (11-98)||(3597842-3597929)
chr2 (1-98)||(3956651-3956748)
chr2 (1-98)||(19181627-19181724)
chr2 (1-98)||(40277240-40277337)
chr2 (1-43)||(6318465-6318507)
chr2 (22-98)||(1386114-1386190)
[»] chr1 (13 HSPs)
chr1 (1-98)||(42517246-42517343)
chr1 (1-98)||(47022781-47022878)
chr1 (1-95)||(5975067-5975161)
chr1 (1-98)||(10155968-10156065)
chr1 (1-98)||(48392358-48392455)
chr1 (1-98)||(49902547-49902644)
chr1 (1-98)||(7742731-7742828)
chr1 (1-98)||(38859930-38860027)
chr1 (1-98)||(23908364-23908451)
chr1 (1-98)||(3346865-3346962)
chr1 (1-98)||(29149510-29149597)
chr1 (1-75)||(37189719-37189792)
chr1 (1-63)||(10907635-10907697)
[»] chr5 (13 HSPs)
chr5 (1-97)||(38397677-38397773)
chr5 (4-98)||(6257362-6257456)
chr5 (1-98)||(16618522-16618619)
chr5 (1-98)||(15631693-15631790)
chr5 (1-98)||(23218564-23218661)
chr5 (1-98)||(37168985-37169082)
chr5 (1-98)||(8456915-8457012)
chr5 (1-98)||(39862439-39862536)
chr5 (1-98)||(10081224-10081323)
chr5 (1-95)||(29491369-29491463)
chr5 (1-89)||(36769035-36769123)
chr5 (1-94)||(25560284-25560376)
chr5 (1-50)||(29790219-29790268)
[»] chr7 (14 HSPs)
chr7 (1-98)||(34707195-34707292)
chr7 (1-98)||(10576752-10576849)
chr7 (1-98)||(29238095-29238192)
chr7 (1-98)||(34259597-34259694)
chr7 (1-98)||(44164695-44164792)
chr7 (1-98)||(29981065-29981162)
chr7 (1-98)||(29555891-29555988)
chr7 (1-63)||(24320426-24320488)
chr7 (1-98)||(19334512-19334609)
chr7 (1-57)||(32876523-32876579)
chr7 (1-63)||(33057644-33057706)
chr7 (1-63)||(17303101-17303163)
chr7 (1-66)||(10334257-10334322)
chr7 (16-73)||(41853205-41853262)
[»] chr6 (8 HSPs)
chr6 (1-98)||(13627619-13627716)
chr6 (1-98)||(24694603-24694700)
chr6 (1-98)||(9231806-9231903)
chr6 (1-97)||(14309752-14309847)
chr6 (1-70)||(1727913-1727982)
chr6 (1-98)||(11084669-11084765)
chr6 (1-97)||(24497527-24497623)
chr6 (1-98)||(28750602-28750699)
[»] chr3 (15 HSPs)
chr3 (1-98)||(21853276-21853373)
chr3 (1-98)||(13856178-13856275)
chr3 (1-98)||(44994920-44995017)
chr3 (1-98)||(8950456-8950553)
chr3 (1-98)||(5391536-5391633)
chr3 (1-98)||(40845869-40845966)
chr3 (1-71)||(32352926-32352996)
chr3 (1-98)||(20382598-20382693)
chr3 (1-98)||(36539711-36539808)
chr3 (1-60)||(3178782-3178841)
chr3 (1-98)||(1781841-1781938)
chr3 (1-98)||(43347288-43347385)
chr3 (1-37)||(23467507-23467543)
chr3 (1-98)||(27642739-27642836)
chr3 (1-37)||(19649385-19649421)
[»] chr8 (10 HSPs)
chr8 (1-98)||(22324675-22324772)
chr8 (1-98)||(35806873-35806970)
chr8 (1-98)||(42072507-42072604)
chr8 (1-99)||(21525437-21525535)
chr8 (1-98)||(33934321-33934418)
chr8 (1-98)||(42013951-42014048)
chr8 (1-98)||(26021475-26021573)
chr8 (1-86)||(16523185-16523270)
chr8 (4-87)||(21488148-21488231)
chr8 (1-59)||(24065352-24065410)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-98)||(54598-54695)


Alignment Details
Target: chr4 (Bit Score: 168; Significance: 5e-90; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 101 - 322
Target Start/End: Original strand, 53958684 - 53958913
Alignment:
Q  101 catgttagctcctctgtatgtcgtcatgcaattattgaatctctaccattgaatcaacatcaaacgactcatatttttactttacaaaattcattttatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53958684 catgttagctcctctgtatgtcgtcatgcaattattgaatctctaccattgaatcaacatcaaacgactcatatttttactttacaaaattcattttatt 53958783  T
Q  201 ataaacaaattttacatcaggnnnnnnngaatgaaatattagtaaatttacttatttatccaa--------tataataattctaaaatacttctcattta 292  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||        ||| |||||||||||||||||||||||||    
T  53958784 ataaacaaattttacatcaggtttttttgaatgaaatattagtaaatttacttatttatccaatatttagttatgataattctaaaatacttctcattta 53958883  T
Q  293 atttatcttcttgaatttttaggggaatcg 322  Q
    ||||| ||||||||||||||||| ||||||    
T  53958884 atttaacttcttgaatttttaggtgaatcg 53958913  T

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Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1535850 - 1535947
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1535850 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgccccgggtcgccgggccttagaaccgccc 1535947  T

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Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 49284436 - 49284530
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccg 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  49284436 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccggacgagtgcccgggttcgctgggccttagaaccg 49284530  T

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Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31377469 - 31377565
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| |||| ||| |||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  31377469 ttatataagaaattcatagggatttacataagaaattgaaaaaatttgggcc-ggagcccgggcgagtgcccggggtcgccgggccatagaaccgccc 31377565  T

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Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35019015 - 35019111
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||  |||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  35019015 ttatataagaaattcatagg-atttacacaagaaattgtaaaaaatttggcccagagcccgggcgagtgcccagggtcgccgggccttagaaccgccc 35019111  T

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Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 36851436 - 36851342
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccg 95  Q
    |||||||| ||||||||||||||||||||||||||||| ||||  ||||||||||||||| |||||||||| |||||||| |||||||| |||||    
T  36851436 ttatataataaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccaggcgagtgcccggggtcgctgggccttaaaaccg 36851342  T

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Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17888599 - 17888502
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||  ||||| |||||||||||||||||||| ||||||||| |||| |||||||||||    
T  17888599 ttatataagaaattcataggaatttacataagaaattgaaaaaaatttgggccggagcccgggcgagtgcccggggtcgcctggccatagaaccgccc 17888502  T

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Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 36012234 - 36012138
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||| |||||| ||||  ||||||||| ||||| | ||||||||  |||||||||||||||||||||||||    
T  36012234 ttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttggcccgaagccc-gacgagtgcccagggtcgccgggccttagaaccgccc 36012138  T

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Target: chr4; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11054535 - 11054631
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| ||||   |||| |||||||||||| ||||||  |||||||||||||| |||||||||||    
T  11054535 ttatataagaaattcatagggatttacataagaaattgcaaaa-aattggaccggagcccgggtgagtgctcggggtcgccgggccatagaaccgccc 11054631  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16338262 - 16338165
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||| ||||||||||| |||||||||| |||||| ||||   ||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  16338262 ttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattggcccggaatccgggcgaatgcccggggtcgccgggccttagaaccgccc 16338165  T

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Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20818646 - 20818743
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  |||||  | ||||||||||||||||| || ||||||||  | |||||||||||    
T  20818646 ttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttgggtcagagcccgggcgagtgcccggagtcgccggatcatagaaccgccc 20818743  T

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Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37801313 - 37801216
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||| ||||||||||  ||||||||||||||||| ||||  ||| ||||||||||||| ||| |||||| | ||| ||||||||||||||||||    
T  37801313 ttatataaaaaattcatagaaatttacacaagaaattgcaaaaaatttagcccggagcccggacgaatgcctgagatcgtcgggccttagaaccgccc 37801216  T

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Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25954829 - 25954891
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    |||||||||||||||||||| ||||||||||||||||| ||||  ||||||||||||||||||    
T  25954829 ttatataagaaattcataggaatttacacaagaaattgcaaaaaatttggcccggagcccggg 25954891  T

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Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 34241072 - 34241134
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    ||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||    
T  34241072 ttatataagaaattcatagggatctacacaagaaattgcaaaaaatttggcccggagcccggg 34241134  T

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Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 52632597 - 52632680
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaacc 94  Q
    |||||||||||||||||||||||||||||||||||          ||||||||||||||| ||| |||||| |||||| |||||||||||||||    
T  52632597 ttatataagaaattcatagggatttacacaagaaa----------tttggcccggagcccaggcaagtgcccggggtcaccgggccttagaacc 52632680  T

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Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 46583590 - 46583508
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaac 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||          ||||||||||||||||||||| ||||||||||| |||||||||    
T  46583590 ttatataagaaattcatagggatttacacaaaaaatttga----------cccggagcccgggcgagtgcccggggtcgccggaccttagaac 46583508  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 19124787 - 19124691
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgcc 97  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||   || | |||||||||| || | ||||| |  ||||||| |||||||||||||    
T  19124787 ttatataagaaattcagaggaatttacataagaaattgcaaaaaaattaggccggagcccgcgcaactgcctagactcgccggaccttagaaccgcc 19124691  T

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Target: chr2 (Bit Score: 82; Significance: 1e-38; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42769807 - 42769710
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42769807 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 42769710  T

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Target: chr2; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14186487 - 14186390
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||  ||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14186487 ttatataagaaattcatagggatttacacaagaaattacaaaaaatttggcccggagctcgggcgagtgcctggggtcgccgggccttagaaccgccc 14186390  T

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Target: chr2; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 29846521 - 29846618
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  29846521 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgtcgggccttagaaccgccc 29846618  T

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Target: chr2; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14942093 - 14941996
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  14942093 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgtccggggtcgccgagccttagaaccgccc 14941996  T

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Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 98
Target Start/End: Complemental strand, 3597929 - 3597842
Alignment:
Q  11 aattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||| ||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3597929 aatttatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 3597842  T

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Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3956651 - 3956748
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||| ||||||||||||||||||| || |||||| ||| ||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||    
T  3956651 ttatataataaattcatagggatttacataaaaaattgaaaattttttgggccggagcccgggcgagtgcccggggtcaccgggccatagaaccgccc 3956748  T

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Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19181627 - 19181724
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||  ||||||||  ||||| |||||||| | ||||||||||||||||||||||||||    
T  19181627 ttatataagaaattcataggaatttacacaagaaattgcaaaaaatttggcccatagcccaggcgagtgtccggggtcgccgggccttagaaccgccc 19181724  T

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Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40277337 - 40277240
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||| ||||||||||||| || |||||| ||||  ||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  40277337 ttatataagaaatttatagggatttacataaaaaattgcaaaaaatttggcccggagcccggacaagtgcccggggtcgccgggccttagaaccgccc 40277240  T

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Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 6318507 - 6318465
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaa 43  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  6318507 ttatataagaaattcatagggatttacataagaaattgaaaaa 6318465  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 1386190 - 1386114
Alignment:
Q  22 atttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||| ||||||||| ||||   ||||  | ||||||||||||||||| ||||||| || ||| |||||||||||    
T  1386190 atttacataagaaattgcaaaaaaattgggtccgagcccgggcgagtgcccggggtcgtcgagccatagaaccgccc 1386114  T

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Target: chr1 (Bit Score: 82; Significance: 1e-38; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 42517343 - 42517246
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42517343 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 42517246  T

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Target: chr1; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47022781 - 47022878
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47022781 ttatataagaaattcatagagatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 47022878  T

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Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5975067 - 5975161
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccg 95  Q
    ||||||||||||||| |||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5975067 ttatataagaaattcttagggatttacacaagaaattgaaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccg 5975161  T

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Target: chr1; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10156065 - 10155968
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||   ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10156065 ttatataagaaattcataggaatttacacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 10155968  T

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Target: chr1; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 48392455 - 48392358
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  48392455 ttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggctcggagcccgggcgagtgcccgaggtcgccgggccttagaaccgccc 48392358  T

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Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 49902547 - 49902644
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  49902547 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgagcgagtgcccggagtcgccggaccttagaaccgccc 49902644  T

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Target: chr1; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 7742828 - 7742731
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||| ||||||||||||||||||| ||||   || || ||||||||||||||||||| ||||||||||||||||||||||||||    
T  7742828 ttatataagaaattcataaggatttacacaagaaattgcaaaaaaatttgctcggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 7742731  T

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Target: chr1; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 38859930 - 38860027
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||  ||||| |||||||||||||||||||| |||||||||||||| |||||||||||    
T  38859930 ttatataagaaattcataggaatttacataagaaattgaaaaaaatttgggccggagcccgggcgagtgcccggggtcgccgggccatagaaccgccc 38860027  T

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Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23908364 - 23908451
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| |||||||||| |||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23908364 ttatataagaaattcataggaatttacacaaaaaatt----------tggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 23908451  T

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Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 3346865 - 3346962
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||| |||||| ||||  ||||||||| ||| |||||||||||| ||| |||| || |||||||| |||||    
T  3346865 ttatataagaaattcatagggatttacacaacaaattgcaaaaaatttggcccgaagctcgggcgagtgcccgggatcgctggaccttagaatcgccc 3346962  T

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Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29149597 - 29149510
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||| |||||          ||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  29149597 ttatataagaaattcatagggatttacacaaaaaatt----------tggtccggagcccgggcgagtgcctggggtcgccaggccttaaaaccgccc 29149510  T

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Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37189719 - 37189792
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggg 75  Q
    ||||||||||||||||||| |||||||| ||||||||| ||||  ||||| |||||| |||||||| ||||||||    
T  37189719 ttatataagaaattcatagagatttacataagaaattgcaaaa-atttgggccggagtccgggcgaatgcctggg 37189792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10907697 - 10907635
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||  ||||| ||||||||||||    
T  10907697 ttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggccggagcccggg 10907635  T

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Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 38397677 - 38397773
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgcc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38397677 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgcc 38397773  T

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Target: chr5; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 6257456 - 6257362
Alignment:
Q  4 tataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6257456 tataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 6257362  T

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Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16618619 - 16618522
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  16618619 ttatataagaaattcatagggatttacacaagaaattgtaaaaaatttggcccggagcccggacgagtgcccggggtcgccgggccttagaaccgccc 16618522  T

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Target: chr5; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15631693 - 15631790
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||| ||||||||||| ||||  ||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  15631693 ttatataagaaattcatagggatttatacaagaaattgtaaaaaatttggcctggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 15631790  T

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Target: chr5; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23218564 - 23218661
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  23218564 ttatataagaaattcatagggatttacacaagaaattgcaaaaactttggcccggaacccgggcgagtgcccgggatcgccgggccttagaaccgccc 23218661  T

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Target: chr5; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 37169082 - 37168985
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  37169082 ttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttggcccggagcccgggcaagtgcccggggtcgccgggccttagaaccgccc 37168985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8457012 - 8456915
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  ||||| ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8457012 ttatataagaaattcatagggatttacataagaaattgaaaaaaatttgggccggagcccgggcgagtgcatggggtcgccgggccatagaaccgccc 8456915  T

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Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39862536 - 39862439
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||   |||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  39862536 ttatataagaaattcataggaatttacacaagaaattgcaaaaaaattggcccggagctcgggcgagtgcccggggtcgccgggccttagaaccgccc 39862439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10081224 - 10081323
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaattt--ttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| ||||     |||| || ||||||||||||||||||||| |||||||||| |||||||||||    
T  10081224 ttatataagaaattcatagggatttacataagaaattgaaaaaaaaaattgggccagagcccgggcgagtgcctgggatcgccgggccatagaaccgccc 10081323  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 29491463 - 29491369
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccg 95  Q
    |||||||||||||||||||  ||||||| ||||||||| ||||  ||||| | | ||||||| |||||| | |||||||||||||| | ||||||    
T  29491463 ttatataagaaattcatagaaatttacataagaaattgcaaaagatttgggctgaagcccggacgagtgtccggggtcgccgggccatcgaaccg 29491369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36769123 - 36769035
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggcctta 89  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||  ||||| |||||| |||| | |||||||||| || |||| |||||    
T  36769123 ttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggccggagtccggacaagtgcctgggctcaccggacctta 36769035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 25560376 - 25560284
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaacc 94  Q
    |||||||||||||| ||| ||||||||| |||||||| |||||   |||  ||||||||||| |||||| | ||||| |||||||| |||||||    
T  25560376 ttatataagaaatttataaggatttacataagaaatt-gaaaaaaattgagccggagcccggacgagtggccggggttgccgggccatagaacc 25560284  T

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Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29790268 - 29790219
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttgg 50  Q
    |||||||||||||||||| | ||||||| ||||||||| |||| ||||||    
T  29790268 ttatataagaaattcataagaatttacataagaaattgtaaaaattttgg 29790219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 3e-36; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34707195 - 34707292
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  34707195 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggtcttagaaccgccc 34707292  T

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Target: chr7; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 10576752 - 10576849
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| ||||||| ||||||||||| ||||||||||||||    
T  10576752 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggtgagtgcccggggtcgccggaccttagaaccgccc 10576849  T

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Target: chr7; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29238192 - 29238095
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  29238192 ttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcccggggttgccgggccttagaaccgccc 29238095  T

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Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 34259597 - 34259694
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  34259597 ttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcccggagtcgccgggccttagaaccgccc 34259694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44164792 - 44164695
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||  ||||||||||||||||| ||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44164792 ttatataagaaattcatagaaatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccggggtcgccgggccttagaaccgccc 44164695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29981162 - 29981065
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  29981162 ttatataagaaattcatagggatttacacaagaaattgcaaaagaattggcccggagcccgggcgagtgcccgaggtcgccgggtcttagaaccgccc 29981065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 29555988 - 29555891
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| |||||||||||||||||  |||   ||||||||||| |||||||||||||  ||||||| ||||| |||||||||||    
T  29555988 ttatataagaaattcataggaatttacacaagaaattgtcaaaaaattggcccggaggccgggcgagtgcccagggtcgctgggccatagaaccgccc 29555891  T

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Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24320488 - 24320426
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    ||||||||||||||| |||| ||||||||||||||||| ||||  ||||||||||||||||||    
T  24320488 ttatataagaaattcgtaggaatttacacaagaaattgcaaaaaatttggcccggagcccggg 24320426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 19334609 - 19334512
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||   |||| ||| | || ||| ||||| | |||||||||||||| |||||||||||    
T  19334609 ttatataagaaattcataggtatttacataagaaattgcaaaaaaattgggccgaaacctgggggagtgaccggggtcgccgggccatagaaccgccc 19334512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 32876579 - 32876523
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggag 57  Q
    ||||||||||||||||||||||| |||||||||||||| ||||  ||||||||||||    
T  32876579 ttatataagaaattcatagggatctacacaagaaattgcaaaaaatttggcccggag 32876523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33057706 - 33057644
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    |||||||||||||||||||||||||||| ||||||||| ||||   |||| ||||||||||||    
T  33057706 ttatataagaaattcatagggatttacataagaaattgaaaaaaaattgggccggagcccggg 33057644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 17303163 - 17303101
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccggg 63  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||   ||||  |||||||||||    
T  17303163 ttatataagaaattcataggaatttacataagaaattgcaaaaaaattgggtcggagcccggg 17303101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10334257 - 10334322
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcga 66  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||   |||| || ||||||||||||    
T  10334257 ttatataagaaattcagaggaatttacataagaaattgcaaaaaaattgggccagagcccgggcga 10334322  T

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Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 41853205 - 41853262
Alignment:
Q  16 atagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctg 73  Q
    ||||| ||||| | ||||||||| ||||  ||||| ||||||||||||||||||||||    
T  41853205 ataggaatttaaataagaaattgcaaaaaatttgggccggagcccgggcgagtgcctg 41853262  T

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Target: chr6 (Bit Score: 78; Significance: 3e-36; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13627619 - 13627716
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13627619 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccggacgagtgcttggggtcgccgggccttagaaccgccc 13627716  T

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Target: chr6; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 24694700 - 24694603
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  24694700 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgggcgagtgcccagggttgccgggccttagaaccgccc 24694603  T

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Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9231903 - 9231806
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||   ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9231903 ttatataagaaattcatagagatttacacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcccggggtcgccgagccttagaaccgccc 9231806  T

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Target: chr6; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 14309847 - 14309752
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgcc 97  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||| ||  ||||||||||| ||||||||||||||||||| |||||||    
T  14309847 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggccc-gaaaccgggcgagtgtctggggtcgccgggccttataaccgcc 14309752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 1727982 - 1727913
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgc 70  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  1727982 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcctgggcgagtgc 1727913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11084669 - 11084765
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||   ||||| |||| ||||||||| |||| |||||| |||||||||||||||||||    
T  11084669 ttatataagaaattcataggaatttacacaagaaattgcaaaaaaattggctcggaacccgggcga-tgcccggggtcaccgggccttagaaccgccc 11084765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 24497623 - 24497527
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgcc 97  Q
    |||||||||||||||| ||| |||||||||| |||||| ||||  ||||| |||||||| | || | ||||  || |||||| ||||||||||||||    
T  24497623 ttatataagaaattcagaggaatttacacaaaaaattgcaaaaaatttgggccggagcctgtgcaactgcccaggctcgccgagccttagaaccgcc 24497527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 28750699 - 28750602
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||| | | ||||||| ||||||||| ||||   ||||||| ||||||| || | ||||  |  ||||||||||||||||||||||    
T  28750699 ttatataagaaattcagaagaatttacataagaaattgcaaaaaaattggcccagagcccgagcaattgcccagactcgccgggccttagaaccgccc 28750602  T

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Target: chr3 (Bit Score: 78; Significance: 3e-36; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21853276 - 21853373
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21853276 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccggccgagtgcccggggtcgccgggccttagaaccgccc 21853373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13856178 - 13856275
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||| ||||||  |||||||||||||||||||||||||    
T  13856178 ttatataagaaattcatagggatttacacaagaaattgaaaaaaatttggcccggagcccgggcaagtgccctgggtcgccgggccttagaaccgccc 13856275  T

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Target: chr3; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44995017 - 44994920
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  44995017 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccggagcccgagcgagtacccggggtcgccgggccttagaaccgccc 44994920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8950553 - 8950456
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||||||||||||| ||||  |||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  8950553 ttatataagaaattcataggaatttacacaagaaattgcaaaaaatttggcccagagcccgggcgagtgcccggggtcgccaggccttagaaccgccc 8950456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5391536 - 5391633
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||||||||||  |||   ||||| |||||||||||||||||||  ||||||||||||| |||||||||||    
T  5391536 ttatataagaaattcatagggatttacacaagaaattgtcaaaaaattggcgcggagcccgggcgagtgcccagggtcgccgggccatagaaccgccc 5391633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 40845966 - 40845869
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||||||||||||||| |||||| ||||  |||| |||||| ||||||||| |||| | ||||||||||||||||||||||||    
T  40845966 ttatataagaaattcatagggatttacacaaaaaattgcaaaaaatttgacccggaacccgggcgaatgcccgaggtcgccgggccttagaaccgccc 40845869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32352926 - 32352996
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcc 71  Q
    |||||||||||||||||||||||||| ||||||||||| ||||   |||||||||||||||||||||||||    
T  32352926 ttatataagaaattcatagggatttatacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcc 32352996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 20382598 - 20382693
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||  ||||  ||||| ||||||||||||| |||||| ||||||||| |||| |||||||||||    
T  20382598 ttatataagaaattcatagggatttacataagaaatt-aaaaaaatttgggccggagcccgggcaagtgcccggggtcgcc-ggccatagaaccgccc 20382693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 36539711 - 36539808
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||| ||||||||||||| ||||||||| | ||  ||| | ||||||||||||||| |||| | | ||||| ||||||||||||||||    
T  36539711 ttatataagaaatttatagggatttacataagaaattgcataaaatttaggccggagcccgggcgactgcccgagctcgccaggccttagaaccgccc 36539808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 3178782 - 3178841
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagccc 60  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||| |||||||||    
T  3178782 ttatataagaaattcatagggatttacacaagaaattgaaaaaaatttgggccggagccc 3178841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 1781841 - 1781938
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||| ||||||||||| ||||||||| ||||  ||||| || ||||| |||||| |||  ||| ||||||||||||  ||||||||    
T  1781841 ttatataagaaattcagagggatttacataagaaattgcaaaaaatttgggccagagcctgggcgactgcacgggctcgccgggccttgaaaccgccc 1781938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 43347385 - 43347288
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||| ||| ||||||| ||||||||| ||||  |||||  |||||||||| | | ||||   | |||||||| |||||||||||||    
T  43347385 ttatataagaaattcagaggaatttacataagaaattgcaaaaaatttgggtcggagcccggacaactgcccaagctcgccgggtcttagaaccgccc 43347288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23467543 - 23467507
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaatt 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  23467543 ttatataagaaattcatagggatttacacaaaaaatt 23467507  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 27642739 - 27642836
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||| | ||||||||| ||||||||| ||||  ||||  | ||||||| ||| | ||||   | ||||||||||||||||| ||||    
T  27642739 ttatataagaaattcaaaaggatttacataagaaattgcaaaaaatttgagcaggagcccaggcaactgcccaagctcgccgggccttagaactgccc 27642836  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19649421 - 19649385
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaatt 37  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  19649421 ttatataagaaattcatagcgatttacataagaaatt 19649385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 7e-34; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22324675 - 22324772
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  22324675 ttatataagaaattcatagggatttacacaagaaattacaaaaaatttggcccggagcccgggcgagtgcccggggttgccgggccttagaaccgccc 22324772  T

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Target: chr8; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 35806873 - 35806970
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    ||||||||||||||||||| |||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  35806873 ttatataagaaattcatagagatttacacaagaaattgcaaaaaatttggcccggagcccggccgagtgcccggggtcgccgggccttagaaccgccc 35806970  T

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Target: chr8; HSP #3
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42072507 - 42072604
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  42072507 ttatataagaaattcatagggatttacacaagaaattgcaaaaaaattggcccggagcccgggcgagtgcccggggtcgccgggccatagaaccgccc 42072604  T

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Target: chr8; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21525437 - 21525535
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccct 99  Q
    |||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||| |||||||||| |||||| ||||||||||||||||||||    
T  21525437 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttgacccggagccctggcgagtgcccggggtcaccgggccttagaaccgccct 21525535  T

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Target: chr8; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 33934418 - 33934321
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||| ||||||| ||||||||| ||||  ||||||| |||||||||||||||||| ||||||||||||||||| ||||||||    
T  33934418 ttatataagaaattcataggaatttacaaaagaaattgcaaaaaatttggcctggagcccgggcgagtgcccggggtcgccgggccttaaaaccgccc 33934321  T

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Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42013951 - 42014048
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||||||||||||| ||||  ||||||||| | ||||| | |||||| ||||||||||||||||||||||||||    
T  42013951 ttatataagaaattcatagggatttacacaagaaattgcaaaaaatttggcccgaaacccggacaagtgcccggggtcgccgggccttagaaccgccc 42014048  T

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Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 26021475 - 26021573
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgcc-gggccttagaaccgccc 98  Q
    |||||||||||||||||||||||||||| ||||||||| ||||  |||||| |||||||||||| |||||| |||||| || |||||||||||||||||    
T  26021475 ttatataagaaattcatagggatttacaaaagaaattgcaaaaaatttggcacggagcccgggctagtgcccggggtcaccggggccttagaaccgccc 26021573  T

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Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 16523185 - 16523270
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggcc 86  Q
    |||||||||||||||||||||||||||| | ||||||| ||||  ||||| |||||||||| ||||||| | || |||||||||||    
T  16523185 ttatataagaaattcatagggatttacatatgaaattgtaaaaaatttgggccggagcccgagcgagtgtccggcgtcgccgggcc 16523270  T

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Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 21488148 - 21488231
Alignment:
Q  4 tataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggcct 87  Q
    ||||||||||||| ||| ||||||||||||||||  ||||  ||| |  | |||||||| |||||||| ||||||||| |||||    
T  21488148 tataagaaattcaaaggaatttacacaagaaattataaaagctttaggacagagcccggacgagtgcccggggtcgccaggcct 21488231  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 24065352 - 24065410
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcc 59  Q
    ||||||||||||||||||| |||||| |  |||||||| |||| ||||||||| |||||    
T  24065352 ttatataagaaattcatagagatttatatgagaaattgcaaaagttttggcccagagcc 24065410  T

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Target: scaffold0079 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 54598 - 54695
Alignment:
Q  1 ttatataagaaattcatagggatttacacaagaaattggaaaatttttggcccggagcccgggcgagtgcctggggtcgccgggccttagaaccgccc 98  Q
    |||||||| ||||||||||| |||||||||| |||||| ||||   ||||||||||  |||||||| |||| ||||||||||||||||||||||||||    
T  54598 ttatataaaaaattcataggaatttacacaaaaaattgcaaaaaaattggcccggaatccgggcgaatgcccggggtcgccgggccttagaaccgccc 54695  T

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