View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5011_high_15 (Length: 286)
Name: NF5011_high_15
Description: NF5011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5011_high_15 |
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Alignment Details
Target: chr5 (Bit Score: 171; Significance: 7e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 13 - 271
Target Start/End: Original strand, 31655809 - 31656066
Alignment:
| Q |
13 |
gggaatactgttgtgattatttaaagtttaatgtgatgatccatgaaccatgtgactcacgaatggtatcagagtcgataatataccaaacactttgtat |
112 |
Q |
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| T |
31655809 |
gggaatattcttgtgattatttaaagattaatgtgatgatccatgaactatgtgactcacgaatggtatcagagccgataatataccaa-cactttgcat |
31655907 |
T |
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| Q |
113 |
cgaaagtttcatggatcaaactactgtgacccaacaatgatataaaagccaataatttaaccgactccttgtatcgaaagtcttacttatcaagatgttc |
212 |
Q |
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| T |
31655908 |
cgaaagttttatggatcaaattactgtgacccaacaatgatataaaagccaataatttaaccaactccttgtatgaaaagtcttactaaccaagatgttc |
31656007 |
T |
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| Q |
213 |
aaatagcatatctcattgatggggtaagtaacaatgattaaagtgtctgtggatgaaat |
271 |
Q |
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| T |
31656008 |
aaatagcatatttcattgatagggtaagtaacaatggtccacgtgtatgtggatgaaat |
31656066 |
T |
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