View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5011_high_8 (Length: 365)
Name: NF5011_high_8
Description: NF5011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5011_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 7 - 350
Target Start/End: Original strand, 14177367 - 14177710
Alignment:
| Q |
7 |
tcgaagaatatagtcaatgtctgtggagatgtgttgaagaaaaatattgcttcattgggaccattggttttaccatggagggagcaattcctatatgtcg |
106 |
Q |
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| T |
14177367 |
tcgaagaacatagtcaatgtttgtggagatgtgttgaagaaaaatattgcttcattgggaccattggttttaccatggagggagcaattcttatatgtcg |
14177466 |
T |
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| Q |
107 |
tttcaattatttatcacaaactttggagtagaagaagaagaacaagcatatatactccgaaattcaatagggcttttgagcatttctgcatacattcagg |
206 |
Q |
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| T |
14177467 |
tttcaattatttatcacaaactttggagtagaagaagaagaacaagcatatatactccgaaattcaatagggcttttgagcatttctgcatacattcagg |
14177566 |
T |
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| Q |
207 |
aggaagagctgttatacaagccattgagaaaaatttgaagctaaggagagaggatgttgagccatcaaaaatgactctgtacagatttggaaacacttca |
306 |
Q |
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| T |
14177567 |
aggaagagctgttatacaagccattgagaaaaatttgaagctaaggagagaggatgttgaaccatcaaaaatgactctgtacagatttggaaacacttca |
14177666 |
T |
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| Q |
307 |
tcttcttcaatttggtatgagttgtcatatattgaagcaaaagg |
350 |
Q |
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| T |
14177667 |
tcttcttcaatttggtatgagttgtcatacattgaagcaaaagg |
14177710 |
T |
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