View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5011_low_20 (Length: 280)
Name: NF5011_low_20
Description: NF5011
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5011_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 7 - 263
Target Start/End: Original strand, 47619563 - 47619819
Alignment:
| Q |
7 |
agatgaagatgaacggctgtgagtagtgcgatgagttgtaggtgtagataccggacttggagacaggttccggttaacggcaaaatatagatcaagagcc |
106 |
Q |
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| T |
47619563 |
agatgaagatgaacggctgtgagtagtgcgatgagttgtaggtgtagataccggacttggagacaggttccggttaacggcaaaatatagatcaagagcc |
47619662 |
T |
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| Q |
107 |
ggtaatgtattgcaaagcttttgtccatcttcctcattaaatccaaatcctaattcaatacatcctctaagctcatttagatcttcgtcgttgcaatcgt |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47619663 |
ggtaatgtattgcaaagcttttgtccatcttcctcattaaatccaaatcctaattcaatacatcctctaagctcatttagatcttcgtcgttgcaatcgt |
47619762 |
T |
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| Q |
207 |
gcatgctattcctcctacgttgagtttgtcgacgccttctttcccacgccatgtctc |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47619763 |
gcatgctattcctcctacgttgagtttgtcgacgccttctttcccacgccatgtctc |
47619819 |
T |
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